738 135 0 0 chr11_random 200000 200104 -3286298 - AluSq/x SINE Alu -207 105 2 2167 90 3 0 chr11_random 200465 200753 -3285649 + AluSx SINE Alu 5 293 -19 2284 80 0 3 chr11_random 201823 202125 -3284277 - AluY SINE Alu -10 301 1 218 231 0 0 chr11_random 202172 202211 -3284191 - L2 LINE L2 -9 3263 3225 2188 98 0 3 chr11_random 202444 202741 -3283661 + AluSq SINE Alu 1 296 -17 813 178 7 0 chr11_random 203251 203397 -3283005 + FRAM SINE Alu 1 146 -30 189 0 0 0 chr11_random 203401 203422 -3282980 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2162 110 0 0 chr11_random 204473 204772 -3281630 + AluSx SINE Alu 1 299 -13 1654 162 3 17 chr11_random 205387 205785 -3280617 + AluJb SINE Alu 1 312 0 216 303 71 20 chr11_random 205802 205901 -3280501 - MIR SINE MIR -79 183 80 1999 120 3 0 chr11_random 206123 206423 -3279979 + AluSq SINE Alu 3 303 -10 497 344 25 22 chr11_random 207189 207432 -3278970 + MIR SINE MIR 1 243 -19 861 128 7 0 chr11_random 207816 207957 -3278445 - AluSp/q SINE Alu -10 303 162 207 150 0 25 chr11_random 207957 207997 -3278405 + MIR SINE MIR 112 150 -112 1684 135 99 0 chr11_random 208664 208946 -3277456 + AluSx SINE Alu 1 310 -2 2143 125 0 0 chr11_random 209021 209333 -3277069 + AluSx SINE Alu 1 312 0 2220 88 7 0 chr11_random 209710 210015 -3276387 - AluSp SINE Alu -6 307 1 4087 164 7 53 chr11_random 210161 210929 -3275473 - MER44D DNA MER2_type 0 605 2 1323 276 92 55 chr11_random 211004 211602 -3274800 + MER115 DNA AcHobo 55 674 -19 1925 142 3 3 chr11_random 213004 213306 -3273096 - AluSx SINE Alu -10 302 1 216 97 0 0 chr11_random 213920 213951 -3272451 + (A)n Simple_repeat Simple_repeat 1 31 0 342 324 185 23 chr11_random 214602 215304 -3271098 - L2 LINE L2 0 3272 2444 722 174 0 0 chr11_random 215889 216004 -3270398 + FLAM_A SINE Alu 1 115 -18 275 67 44 0 chr11_random 216005 216050 -3270352 + (AAATG)n Simple_repeat Simple_repeat 4 50 0 665 358 109 20 chr11_random 216053 216601 -3269801 - L2 LINE L2 -219 3053 2439 435 295 102 56 chr11_random 216760 217242 -3269160 - L2 LINE L2 -872 2442 1939 204 188 167 0 chr11_random 217277 217325 -3269077 + MIR SINE MIR 67 122 -140 2213 92 7 0 chr11_random 217729 218024 -3268378 + AluSp SINE Alu 3 299 -14 1184 158 10 0 chr11_random 218107 218331 -3268071 - AluJo SINE Alu 0 311 86 395 320 78 0 chr11_random 218475 218628 -3267774 + MIR SINE MIR 71 235 -27 190 195 98 0 chr11_random 219193 219234 -3267168 - L2 LINE L2 -4 3268 3224 263 333 16 62 chr11_random 219380 219509 -3266893 - L2 LINE L2 -212 3060 2938 583 269 86 39 chr11_random 219579 219813 -3266589 - MIR SINE MIR -14 248 4 21 0 0 0 chr11_random 220231 220252 -3266150 + AT_rich Low_complexity Low_complexity 1 21 0 1135 241 66 85 chr11_random 221271 221353 -3265049 + MLT1D LTR MaLR 1 83 -422 1911 147 0 10 chr11_random 221353 221660 -3264742 + AluSq SINE Alu 1 304 -9 1135 241 66 85 chr11_random 221660 221830 -3264572 + MLT1D LTR MaLR 83 255 -250 2159 97 0 0 chr11_random 221830 222119 -3264283 + AluSg SINE Alu 1 289 -21 1135 241 66 85 chr11_random 222119 222380 -3264022 + MLT1D LTR MaLR 255 505 0 1940 111 0 17 chr11_random 222551 222858 -3263544 - AluSg SINE Alu 0 310 14 2014 123 3 25 chr11_random 222866 223182 -3263220 - AluSx SINE Alu 0 312 4 432 0 0 0 chr11_random 223190 223238 -3263164 + (TG)n Simple_repeat Simple_repeat 1 48 0 1847 118 4 0 chr11_random 223238 223517 -3262885 - AluSp SINE Alu -33 280 1 780 198 0 0 chr11_random 223537 223663 -3262739 - FLAM_C SINE Alu -16 127 2 631 138 14 87 chr11_random 223693 223831 -3262571 + FLAM_C SINE Alu 3 130 -3 1317 169 85 30 chr11_random 223854 224149 -3262253 + AluJo SINE Alu 1 311 -1 2169 113 0 0 chr11_random 224195 224496 -3261906 + AluSx SINE Alu 12 312 0 272 293 0 49 chr11_random 224613 224695 -3261707 - MIR3 SINE MIR -27 181 104 2033 112 0 19 chr11_random 224861 225175 -3261227 - AluSg1 SINE Alu -1 308 1 1525 163 11 32 chr11_random 225175 225458 -3260944 - AluJb SINE Alu -15 297 21 2135 108 0 0 chr11_random 225858 226153 -3260249 - AluSc SINE Alu -14 295 1 767 247 98 0 chr11_random 226634 226828 -3259574 + MIR SINE MIR 50 262 0 215 242 100 50 chr11_random 227408 227528 -3258874 - MIR3 SINE MIR -70 138 13 * 661 238 79 20 chr11_random 227462 227664 -3258738 + MIR SINE MIR 49 262 0 248 322 154 13 chr11_random 227902 228051 -3258351 - L3 LINE CR1 -98 1479 1310 253 365 0 0 chr11_random 228051 228125 -3258277 + C-rich Low_complexity Low_complexity 2 75 0 1121 168 0 15 chr11_random 229526 229728 -3256674 + AluJb SINE Alu 85 283 -29 618 272 88 44 chr11_random 230602 230672 -3255730 - MIR SINE MIR 0 262 197 2496 52 0 0 chr11_random 230672 230981 -3255421 + AluY SINE Alu 1 309 -2 618 272 88 44 chr11_random 230981 231160 -3255242 - MIR SINE MIR -65 197 2 433 266 14 25 chr11_random 231236 231390 -3255012 - MIR SINE MIR -62 146 3 280 255 92 10 chr11_random 231567 231665 -3254737 + L3 LINE CR1 1403 1508 -69 257 295 86 86 chr11_random 231665 231875 -3254527 + LTR67 LTR ERVL 20 229 -328 300 209 146 45 chr11_random 231888 231998 -3254404 + LTR67 LTR ERVL 405 525 -32 277 330 19 29 chr11_random 232036 232139 -3254263 + MER5A DNA MER1_type 16 117 -72 385 49 7 7 chr11_random 232154 232220 -3254182 - AluY SINE Alu -4 296 247 184 277 54 36 chr11_random 232640 232709 -3253693 + MIR3 SINE MIR 82 155 -53 2572 48 3 0 chr11_random 232709 233019 -3253383 + AluY SINE Alu 1 311 0 184 277 54 36 chr11_random 233019 233061 -3253341 + MIR3 SINE MIR 155 195 -13 180 97 0 0 chr11_random 233769 233800 -3252602 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1223 73 0 6 chr11_random 233803 233967 -3252435 + AluY SINE Alu 138 300 -11 939 120 14 0 chr11_random 233979 234121 -3252281 + AluY SINE Alu 129 272 -39 238 153 34 17 chr11_random 234121 234180 -3252222 + GA-rich Low_complexity Low_complexity 1 60 0 2189 106 0 3 chr11_random 235245 235546 -3250856 + AluSx SINE Alu 3 302 -10 188 345 17 0 chr11_random 235548 235606 -3250796 - MIR SINE MIR -61 147 89 377 187 45 108 chr11_random 236336 236525 -3249877 + MIR SINE MIR 14 182 -68 2051 106 26 10 chr11_random 236592 236895 -3249507 + AluSx SINE Alu 1 308 -4 477 301 19 26 chr11_random 237034 237190 -3249212 - L2 LINE L2 0 3313 3159 2189 91 37 0 chr11_random 237514 237812 -3248590 + AluSp SINE Alu 1 309 -4 279 349 126 8 chr11_random 237909 238164 -3248238 + L2 LINE L2 3025 3309 -4 636 222 142 59 chr11_random 238408 238635 -3247767 + L1MC5 LINE L1 7329 7595 -366 306 0 0 0 chr11_random 238635 238669 -3247733 + (CA)n Simple_repeat Simple_repeat 1 34 0 636 222 142 59 chr11_random 238669 238779 -3247623 + L1MC5 LINE L1 7595 7694 -267 1582 163 33 0 chr11_random 238779 239080 -3247322 - AluSx SINE Alu -1 311 1 204 40 0 0 chr11_random 239205 239230 -3247172 + (A)n Simple_repeat Simple_repeat 1 25 0 303 291 68 6 chr11_random 240037 240205 -3246197 - MIR SINE MIR -51 211 35 2371 67 0 0 chr11_random 240664 240962 -3245440 - AluY SINE Alu -13 298 1 350 343 43 5 chr11_random 241029 241188 -3245214 - MER5A DNA MER1_type -16 167 1 276 312 159 6 chr11_random 241199 241356 -3245046 - MIR SINE MIR -50 212 32 767 288 82 0 chr11_random 242087 242320 -3244082 + MIR SINE MIR 1 252 -10 191 333 200 8 chr11_random 242330 242450 -3243952 - L2 LINE L2 -6 3266 3124 304 294 42 80 chr11_random 242507 242769 -3243633 - L2 LINE L2 -173 3099 2848 2246 76 0 7 chr11_random 243047 243349 -3243053 + AluY SINE Alu 1 300 -11 192 241 103 0 chr11_random 243604 243662 -3242740 + L2 LINE L2 3153 3216 -97 2284 43 0 43 chr11_random 244062 244362 -3242040 - AluY SINE Alu -24 287 1 233 271 79 64 chr11_random 245026 245103 -3241299 - L3 LINE CR1 -195 1382 1301 2152 114 7 20 chr11_random 245103 245401 -3241001 + AluSx SINE Alu 1 294 -18 233 271 79 64 chr11_random 245401 245463 -3240939 - L3 LINE CR1 -276 1301 1241 * 379 326 116 44 chr11_random 245456 245637 -3240765 + L2 LINE L2 3070 3263 -9 367 138 15 31 chr11_random 246324 246389 -3240013 - AluJ SINE Alu -141 161 98 2183 109 30 3 chr11_random 246521 246824 -3239578 - AluSx SINE Alu 0 312 2 212 266 16 47 chr11_random 247610 247674 -3238728 + MIR3 SINE MIR 130 191 -17 216 67 0 0 chr11_random 248177 248207 -3238195 + (TTA)n Simple_repeat Simple_repeat 1 30 0 763 149 9 0 chr11_random 248207 248321 -3238081 - AluJ SINE Alu -196 116 2 238 276 35 0 chr11_random 248785 248843 -3237559 + L2 LINE L2 3205 3264 -8 343 305 85 8 chr11_random 248852 248970 -3237432 - L2 LINE L2 -7 3306 3180 450 262 103 16 chr11_random 249032 249158 -3237244 - MIR3 SINE MIR -6 202 66 326 243 171 38 chr11_random 249582 249792 -3236610 + L1MC5 LINE L1 7547 7784 -177 231 170 19 19 chr11_random 249809 249862 -3236540 + L1MC5 LINE L1 7730 7782 -179 898 108 23 0 chr11_random 249862 249992 -3236410 + FLAM_C SINE Alu 1 133 0 2050 129 0 52 chr11_random 250763 251089 -3235313 - AluSx SINE Alu -3 309 1 421 246 126 60 chr11_random 251291 251490 -3234912 + MIR SINE MIR 34 245 -17 1254 172 0 5 chr11_random 251702 251917 -3234485 + AluJb SINE Alu 85 298 -14 373 279 139 23 chr11_random 251917 252089 -3234313 - MIR SINE MIR -12 250 59 267 233 190 17 chr11_random 252026 252142 -3234260 + MIR3 SINE MIR 25 160 -48 * 2929 268 179 5 chr11_random 252539 253819 -3232583 + L2 LINE L2 1767 3294 -19 1213 73 0 0 chr11_random 253828 253979 -3232423 + AluY SINE Alu 1 151 -160 2025 112 0 0 chr11_random 254202 254471 -3231931 + AluSx SINE Alu 1 269 -43 236 30 30 0 chr11_random 254480 254513 -3231889 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 443 305 53 7 chr11_random 254651 254802 -3231600 - MIR SINE MIR -8 254 97 294 115 0 0 chr11_random 255064 255116 -3231286 + (CA)n Simple_repeat Simple_repeat 2 53 0 1056 212 20 25 chr11_random 255355 255600 -3230802 + MIR SINE MIR 15 258 -4 1844 182 115 22 chr11_random 255704 256166 -3230236 + MLT1D LTR MaLR 1 505 0 218 356 33 11 chr11_random 256573 256663 -3229739 - MIR SINE MIR -101 107 16 2234 115 3 7 chr11_random 256977 257282 -3229120 + AluSq SINE Alu 1 304 -9 445 282 47 53 chr11_random 257324 257494 -3228908 + MIR3 SINE MIR 15 183 -25 2373 103 3 10 chr11_random 257919 258229 -3228173 + AluSx SINE Alu 1 308 -4 644 291 30 20 chr11_random 259171 259374 -3227028 - MIR SINE MIR -12 250 46 2256 119 3 3 chr11_random 259867 260177 -3226225 + AluSx SINE Alu 1 310 -2 201 236 97 28 chr11_random 260187 260259 -3226143 + L3b LINE CR1 1287 1363 -220 1270 96 6 0 chr11_random 261596 261762 -3224640 + AluSq SINE Alu 147 313 0 363 132 0 0 chr11_random 261927 261995 -3224407 + (A)n Simple_repeat Simple_repeat 1 68 0 189 0 0 0 chr11_random 262303 262324 -3224078 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 990 194 0 0 chr11_random 262327 262487 -3223915 - FAM SINE Alu -20 165 6 736 253 129 12 chr11_random 262500 262840 -3223562 + MER113 DNA MER1_type? 91 470 -51 182 350 12 12 chr11_random 262900 262980 -3223422 + L2 LINE L2 3234 3313 0 2405 97 7 0 chr11_random 263007 263315 -3223087 - AluSx SINE Alu -2 310 1 184 389 50 23 chr11_random 263321 263542 -3222860 + L2 LINE L2 2866 3092 -180 1021 184 47 137 chr11_random 263552 264047 -3222355 + LTR7 LTR ERV1 1 450 0 290 261 193 0 chr11_random 264065 264184 -3222218 + L2 LINE L2 3172 3313 0 186 353 152 48 chr11_random 264230 264539 -3221863 + L2 LINE L2 2916 3256 -16 631 224 145 47 chr11_random 264694 264908 -3221494 - MIR SINE MIR -16 246 12 897 246 69 9 chr11_random 265705 265937 -3220465 - MIR SINE MIR -2 260 15 333 228 0 13 chr11_random 265955 266034 -3220368 + MIR SINE MIR 180 257 -5 1823 198 104 50 chr11_random 266035 266514 -3219888 - MLT1D LTR MaLR 0 505 1 300 243 61 111 chr11_random 268966 269166 -3217236 - MIR SINE MIR -41 221 33 2230 120 7 7 chr11_random 269226 269534 -3216868 - AluSq SINE Alu -5 308 1 370 283 113 17 chr11_random 269560 269737 -3216665 - L1ME1 LINE L1 -5 6161 5968 2457 76 10 13 chr11_random 269744 270058 -3216344 - AluSp SINE Alu 0 313 1 255 200 17 17 chr11_random 270223 270283 -3216119 + GA-rich Low_complexity Low_complexity 2 61 0 2511 74 0 6 chr11_random 270402 270714 -3215688 + AluSg SINE Alu 1 310 0 1602 159 0 55 chr11_random 271625 271915 -3214487 + AluJo SINE Alu 1 274 -38 2048 58 61 22 chr11_random 271922 272200 -3214202 + AluY SINE Alu 1 289 -22 198 318 61 0 chr11_random 273334 273400 -3213002 - MIR SINE MIR -98 164 95 415 314 68 5 chr11_random 274567 274758 -3211644 + MIR SINE MIR 52 254 -8 2265 98 10 0 chr11_random 275066 275363 -3211039 - AluSx SINE Alu -12 300 1 1880 145 17 17 chr11_random 275983 276273 -3210129 - AluJb SINE Alu -22 290 1 259 368 104 6 chr11_random 276336 276499 -3209903 - MIR SINE MIR -28 234 56 2418 82 0 13 chr11_random 276644 276948 -3209454 + AluSq SINE Alu 1 300 -13 1989 119 29 0 chr11_random 277969 278246 -3208156 - AluSx SINE Alu -7 305 21 2039 122 4 0 chr11_random 278594 278864 -3207538 + AluSx SINE Alu 24 294 -18 2695 141 50 16 chr11_random 279000 279536 -3206866 + MER21A LTR ERV1 279 931 0 22 35 0 0 chr11_random 279780 279809 -3206593 + AT_rich Low_complexity Low_complexity 1 29 0 895 90 0 0 chr11_random 279919 280030 -3206372 + AluSq/x SINE Alu 1 111 -202 22 0 0 0 chr11_random 280030 280052 -3206350 + GC_rich Low_complexity Low_complexity 1 22 0 1705 146 45 24 chr11_random 280162 280449 -3205953 - AluJo SINE Alu -14 298 6 346 243 194 35 chr11_random 280453 280597 -3205805 + L1MC5 LINE L1 7757 7923 -38 260 286 124 50 chr11_random 280934 281095 -3205307 + MIR SINE MIR 20 192 -70 21 57 0 0 chr11_random 281187 281222 -3205180 + AT_rich Low_complexity Low_complexity 1 35 0 219 69 0 0 chr11_random 281703 281732 -3204670 + (TG)n Simple_repeat Simple_repeat 2 30 0 2455 75 3 0 chr11_random 282658 282952 -3203450 + AluSp SINE Alu 4 298 -15 444 262 49 8 chr11_random 282952 283074 -3203328 + MIR SINE MIR 20 146 -62 1794 193 27 0 chr11_random 283181 283287 -3203115 + MER58B DNA MER1_type 1 103 -2317 2472 96 0 6 chr11_random 283287 283600 -3202802 + AluSx SINE Alu 1 311 -1 1794 193 27 0 chr11_random 283600 283825 -3202577 + MER58B DNA MER1_type 103 341 0 497 293 160 0 chr11_random 283840 283990 -3202412 - MER5A DNA MER1_type -7 182 9 248 321 89 82 chr11_random 284113 284530 -3201872 + L2 LINE L2 2853 3272 0 * 339 333 0 20 chr11_random 284522 284621 -3201781 - MIR3 SINE MIR -102 106 10 726 192 13 13 chr11_random 285188 285339 -3201063 + MLT1A2 LTR MaLR 1 151 -223 1823 137 0 65 chr11_random 285339 285632 -3200770 + AluSx SINE Alu 13 286 -26 421 134 0 0 chr11_random 285655 285722 -3200680 - AluSp/q SINE Alu -19 294 228 330 260 106 19 chr11_random 285782 285886 -3200516 - L2 LINE L2 -26 3246 3134 1892 171 49 0 chr11_random 286082 286410 -3199992 + MER2 DNA MER2_type 1 344 0 1797 147 10 20 chr11_random 286700 286854 -3199548 - AluJb SINE Alu -22 290 139 2178 121 3 7 chr11_random 286854 287160 -3199242 - AluSq SINE Alu -8 305 1 1797 147 10 20 chr11_random 287160 287298 -3199104 - AluJb SINE Alu -173 139 1 260 287 165 24 chr11_random 287358 287522 -3198880 + MIR SINE MIR 32 218 -44 230 322 100 0 chr11_random 287791 287881 -3198521 - MIR SINE MIR -66 142 44 346 198 190 26 chr11_random 288272 288388 -3198014 + MIR SINE MIR 28 162 -100 2253 112 0 0 chr11_random 288389 288683 -3197719 + AluSx SINE Alu 1 294 -18 220 243 171 14 chr11_random 289709 289822 -3196580 - MIR SINE MIR -17 245 112 2194 115 0 0 chr11_random 290299 290586 -3195816 + AluSq SINE Alu 1 287 -26 2163 120 0 13 chr11_random 292676 292976 -3193426 + AluSx SINE Alu 1 296 -16 651 257 11 11 chr11_random 293235 293410 -3192992 + MIR SINE MIR 11 185 -77 2232 134 0 6 chr11_random 294316 294630 -3191772 - AluSx SINE Alu 0 312 1 340 296 15 23 chr11_random 294804 294936 -3191466 + MER5A DNA MER1_type 56 186 -3 2177 103 3 13 chr11_random 295110 295410 -3190992 + AluSx SINE Alu 1 297 -15 1965 129 34 3 chr11_random 296214 296508 -3189894 - AluSx SINE Alu -9 303 1 299 289 16 47 chr11_random 297098 297226 -3189176 + MIR SINE MIR 129 252 -10 257 336 88 7 chr11_random 298450 298587 -3187815 - MIR SINE MIR -97 165 18 215 276 0 0 chr11_random 299495 299553 -3186849 - L2 LINE L2 -1 3312 3255 883 185 7 0 chr11_random 300015 300166 -3186236 + FRAM SINE Alu 1 152 -24 24 32 0 0 chr11_random 300166 300197 -3186205 + AT_rich Low_complexity Low_complexity 1 31 0 2528 78 0 0 chr11_random 300442 300750 -3185652 + AluSc SINE Alu 1 308 -1 2407 78 14 0 chr11_random 301220 301515 -3184887 + AluSp SINE Alu 1 299 -14 2052 116 6 41 chr11_random 302271 302590 -3183812 + AluY SINE Alu 3 310 -1 1944 151 7 0 chr11_random 302622 302914 -3183488 - AluSx SINE Alu -18 294 1 2459 88 0 0 chr11_random 304042 304347 -3182055 + AluSc SINE Alu 1 305 -4 353 318 76 36 chr11_random 306486 306709 -3179693 + MIR SINE MIR 21 252 -10 1284 124 97 74 chr11_random 307040 307256 -3179146 - THE1B LTR MaLR 0 364 187 2353 96 3 10 chr11_random 307256 307570 -3178832 + AluSq SINE Alu 1 312 -1 1284 124 97 74 chr11_random 307570 307756 -3178646 - THE1B LTR MaLR -177 187 7 983 230 50 37 chr11_random 309252 309564 -3176838 + L1MD3 LINE L1 6029 7970 -25 1820 161 0 17 chr11_random 309571 309863 -3176539 - AluJo SINE Alu -25 287 1 199 259 17 0 chr11_random 310309 310367 -3176035 - L2 LINE L2 -5 3308 3250 2230 119 3 3 chr11_random 311073 311383 -3175019 - AluSx SINE Alu -2 310 1 914 144 0 0 chr11_random 313499 313631 -3172771 - FLAM_C SINE Alu -1 132 1 23 0 0 0 chr11_random 315105 315128 -3171274 + AT_rich Low_complexity Low_complexity 1 23 0 349 232 40 10 chr11_random 316770 316869 -3169533 - MER39 LTR ERV1 -2 705 604 1549 227 162 18 chr11_random 316879 317368 -3169034 - LTR48B LTR ERV1 -4 640 82 311 159 0 63 chr11_random 317360 317423 -3168979 - LTR29 LTR ERV1 -427 195 137 * 280 227 59 109 chr11_random 317398 317475 -3168927 - MER34 LTR ERV1 -409 133 63 * 1630 160 53 7 chr11_random 317475 317757 -3168645 + AluJo SINE Alu 1 295 -17 280 227 59 109 chr11_random 317757 317798 -3168604 - MER34 LTR ERV1 -479 63 21 737 252 50 97 chr11_random 317814 318262 -3168140 - MER39 LTR ERV1 -117 590 5 2417 85 0 10 chr11_random 318422 318727 -3167675 - AluSq SINE Alu -11 302 1 594 223 138 73 chr11_random 319207 319400 -3167002 - LTR49-int LTR ERV1 -4332 1908 1729 2110 124 0 7 chr11_random 319400 319711 -3166691 + AluSx SINE Alu 1 312 0 594 223 138 73 chr11_random 319711 319923 -3166479 - LTR49-int LTR ERV1 -4511 1729 426 2978 178 87 44 chr11_random 320453 321111 -3165291 + LTR8 LTR ERV1 6 691 0 1509 173 55 4 chr11_random 321111 321365 -3165037 + HUERS-P1 LTR ERV1 1 267 -5996 3280 178 18 46 chr11_random 321430 322104 -3164298 + HUERS-P1 LTR ERV1 438 1092 -5171 5599 162 51 11 chr11_random 322132 323215 -3163187 + HUERS-P1 LTR ERV1 4665 5790 -541 1303 183 60 47 chr11_random 323227 323544 -3162858 + HUERS-P1 LTR ERV1 5906 6226 -105 1585 229 26 0 chr11_random 323648 323958 -3162444 + HUERS-P1 LTR ERV1 5945 6262 -1 2622 181 93 51 chr11_random 323959 324266 -3162136 + LTR8 LTR ERV1 1 294 -397 216 0 0 0 chr11_random 324266 324290 -3162112 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2622 181 93 51 chr11_random 324290 324645 -3161757 + LTR8 LTR ERV1 294 691 0 1061 268 68 37 chr11_random 324935 325433 -3160969 - LTR48-int LTR ERV1 -5051 1212 14 2510 200 127 42 chr11_random 325438 325933 -3160469 - LTR48 LTR ERV1 -11 776 200 1570 140 0 0 chr11_random 325933 326161 -3160241 - AluSg/x SINE Alu -7 305 78 2510 200 127 42 chr11_random 326161 326380 -3160022 - LTR48 LTR ERV1 -587 200 1 2807 74 112 0 chr11_random 326435 326838 -3159564 + LTR7 LTR ERV1 1 448 -2 7527 112 9 35 chr11_random 326840 328579 -3157823 + HERVH LTR ERV1 1 1518 -6195 14864 24 10 20 chr11_random 328579 331074 -3155328 + L1PA2 LINE L1 3670 6155 0 7527 112 9 35 chr11_random 331074 331209 -3155193 + HERVH LTR ERV1 1518 1655 -6058 1661 170 7 4 chr11_random 331884 332155 -3154247 - AluJo SINE Alu -27 285 14 360 162 99 45 chr11_random 332192 332303 -3154099 + MIR SINE MIR 102 218 -44 427 294 0 6 chr11_random 332872 333035 -3153367 + (TG)n Simple_repeat Simple_repeat 1 162 0 250 305 19 0 chr11_random 333056 333161 -3153241 + (TG)n Simple_repeat Simple_repeat 1 107 0 189 182 0 0 chr11_random 333216 333271 -3153131 + (TG)n Simple_repeat Simple_repeat 2 56 0 340 266 12 30 chr11_random 333315 333484 -3152918 + (TG)n Simple_repeat Simple_repeat 1 166 0 234 0 0 0 chr11_random 333527 333553 -3152849 + (TG)n Simple_repeat Simple_repeat 1 26 0 254 252 48 68 chr11_random 333898 334001 -3152401 + L2 LINE L2 3149 3249 -23 249 191 0 0 chr11_random 334002 334044 -3152358 - L2 LINE L2 -3 3310 3269 358 259 129 29 chr11_random 334570 334709 -3151693 + L2 LINE L2 3160 3312 -1 252 185 111 19 chr11_random 335129 335183 -3151219 - L2 LINE L2 -1 3312 3254 300 321 173 33 chr11_random 335370 335916 -3150486 - L2 LINE L2 0 3272 2632 639 272 53 34 chr11_random 336438 336654 -3149748 + MIR SINE MIR 16 238 -24 350 294 15 7 chr11_random 336935 337071 -3149331 - L1MC5 LINE L1 -30 7931 7795 30 0 0 0 chr11_random 337558 337588 -3148814 + AT_rich Low_complexity Low_complexity 1 30 0 293 322 163 9 chr11_random 338102 338329 -3148073 - MIR SINE MIR 0 262 1 1971 139 0 0 chr11_random 338370 338686 -3147716 - AluSx SINE Alu 0 316 1 279 341 91 8 chr11_random 338687 338819 -3147583 - MIR SINE MIR -102 160 18 353 231 70 52 chr11_random 341500 341664 -3144738 - MIR SINE MIR -61 147 30 2230 108 0 23 chr11_random 341816 342123 -3144279 + AluSx SINE Alu 1 300 -12 2094 104 16 10 chr11_random 342141 342449 -3143953 - AluSp SINE Alu -3 310 1 520 214 151 0 chr11_random 342611 342737 -3143665 + MER3 DNA MER1_type 1 145 -64 493 226 131 24 chr11_random 343419 343587 -3142815 - MIR3 SINE MIR -4 204 19 243 330 39 29 chr11_random 343670 343773 -3142629 + MIR3 SINE MIR 64 167 -41 268 260 186 51 chr11_random 344921 345098 -3141304 + MIR SINE MIR 34 234 -28 412 216 266 7 chr11_random 345546 345685 -3140717 + MIR3 SINE MIR 23 197 -11 1171 202 133 30 chr11_random 345829 346160 -3140242 + MLT1A1 LTR MaLR 1 365 0 2433 82 20 0 chr11_random 346357 346660 -3139742 - AluSc SINE Alu 0 309 1 1876 214 83 36 chr11_random 347634 347987 -3138415 - MLT1E LTR MaLR -41 552 164 2986 102 88 77 chr11_random 347987 348508 -3137894 - MER1A DNA MER1_type 0 527 1 1876 214 83 36 chr11_random 348508 348681 -3137721 - MLT1E LTR MaLR -429 164 1 348 305 195 21 chr11_random 348734 349005 -3137397 - L2 LINE L2 -27 3245 2890 2370 107 0 7 chr11_random 349005 349314 -3137088 - AluSg SINE Alu -3 307 1 348 305 195 21 chr11_random 349314 349416 -3136986 - L2 LINE L2 -382 2890 2807 896 196 22 0 chr11_random 349964 350143 -3136259 + AluJb SINE Alu 121 303 -9 2458 84 10 0 chr11_random 350434 350743 -3135659 - AluSx SINE Alu 0 312 1 387 125 0 0 chr11_random 350743 350799 -3135603 + MADE1 DNA Mariner 25 80 0 187 176 253 11 chr11_random 350821 350912 -3135490 + MIR SINE MIR 56 168 -94 430 305 67 6 chr11_random 351582 351746 -3134656 - MIR SINE MIR -16 246 73 267 387 130 11 chr11_random 352665 352926 -3133476 + L3b LINE CR1 1268 1559 -24 2420 60 3 22 chr11_random 354914 355230 -3131172 + AluY SINE Alu 1 310 -1 1295 103 27 0 chr11_random 355232 355417 -3130985 + AluY SINE Alu 119 308 -3 2216 78 35 0 chr11_random 355645 355929 -3130473 + AluSc SINE Alu 1 294 -15 2074 115 10 13 chr11_random 355949 356254 -3130148 - AluSc SINE Alu -5 304 1 200 61 91 0 chr11_random 356672 356705 -3129697 + MIR SINE MIR 118 153 -109 366 23 0 0 chr11_random 357051 357110 -3129292 + (TG)n Simple_repeat Simple_repeat 1 102 0 366 23 0 0 chr11_random 357110 357153 -3129249 + (TG)n Simple_repeat Simple_repeat 2 44 0 2125 120 3 0 chr11_random 357164 357448 -3128954 - AluSx SINE Alu -27 285 1 2039 169 71 3 chr11_random 357668 358068 -3128334 - MSTB1 LTR MaLR -3 429 1 249 352 23 104 chr11_random 359772 359871 -3126531 + L2 LINE L2 2905 3010 -262 2401 80 0 26 chr11_random 359871 360184 -3126218 - AluSq SINE Alu -8 305 1 249 352 23 104 chr11_random 360184 360230 -3126172 + L2 LINE L2 3010 3058 -214 2554 204 65 22 chr11_random 360230 360392 -3126010 - MER119 DNA MER1_type -1 582 428 378 0 0 0 chr11_random 360392 360434 -3125968 + (CA)n Simple_repeat Simple_repeat 2 43 0 2554 204 65 22 chr11_random 360434 360825 -3125577 - MER119 DNA MER1_type -155 428 5 249 352 23 104 chr11_random 360825 360985 -3125417 + L2 LINE L2 3058 3186 -86 281 192 50 10 chr11_random 361087 361186 -3125216 + GA-rich Low_complexity Low_complexity 2 104 0 326 333 186 13 chr11_random 362162 362393 -3124009 - L3b LINE CR1 -194 1389 1119 325 360 20 27 chr11_random 363049 363196 -3123206 + MIR3 SINE MIR 56 201 -7 267 339 9 26 chr11_random 363372 363487 -3122915 - MIR SINE MIR -10 252 140 649 297 79 28 chr11_random 363533 363823 -3122579 + L2 LINE L2 3006 3310 -3 198 118 0 0 chr11_random 363828 363862 -3122540 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 1428 146 18 13 chr11_random 364216 364442 -3121960 + AluJb SINE Alu 84 310 -2 2327 118 0 0 chr11_random 366368 366672 -3119730 - AluSx SINE Alu -8 304 1 2375 112 0 0 chr11_random 367235 367547 -3118855 - AluSx SINE Alu 0 312 1 1677 151 41 0 chr11_random 367550 367841 -3118561 - L1MA8 LINE L1 -1 6290 5988 241 260 219 0 chr11_random 370437 370533 -3115869 - L2 LINE L2 0 3272 3156 205 355 57 16 chr11_random 370544 370668 -3115734 + MIR SINE MIR 2 130 -132 1035 175 5 26 chr11_random 370724 370918 -3115484 + AluJo SINE Alu 123 312 0 1060 188 72 14 chr11_random 370996 371203 -3115199 + MER20 DNA MER1_type 1 219 0 187 381 72 0 chr11_random 371326 371423 -3114979 + MIR SINE MIR 80 183 -79 33 61 0 0 chr11_random 372149 372198 -3114204 + AT_rich Low_complexity Low_complexity 1 49 0 1914 126 27 14 chr11_random 372584 372878 -3113524 - AluSq SINE Alu -15 298 1 756 176 0 0 chr11_random 373022 373141 -3113261 + FLAM_C SINE Alu 1 119 -24 469 296 69 46 chr11_random 374284 374500 -3111902 + MIR SINE MIR 20 240 -22 2288 83 0 17 chr11_random 374684 374986 -3111416 - AluY SINE Alu -2 309 13 7755 92 6 6 chr11_random 375086 376210 -3110192 + HERVH LTR ERV1 1864 2987 -4726 860 142 20 0 chr11_random 376204 376352 -3110050 + HERVH LTR ERV1 3140 3290 -4423 * 3268 115 4 6 chr11_random 376342 376845 -3109557 + HERVH LTR ERV1 3492 3993 -3720 4282 136 0 1 chr11_random 376847 377510 -3108892 + HERVH LTR ERV1 4488 5149 -2564 1337 115 23 9 chr11_random 377511 377728 -3108674 + HERVH LTR ERV1 5600 5819 -1894 * 2335 100 42 13 chr11_random 377726 378107 -3108295 + HERVH LTR ERV1 7322 7713 0 2993 81 98 0 chr11_random 378107 378515 -3107887 + LTR7 LTR ERV1 1 448 -2 207 238 100 75 chr11_random 378581 378661 -3107741 - MIR SINE MIR -70 192 111 440 303 122 53 chr11_random 378668 379104 -3107298 - L2 LINE L2 -4 3309 2844 923 235 152 0 chr11_random 379170 379447 -3106955 + MER58B DNA MER1_type 21 339 -2 805 313 30 0 chr11_random 379561 379794 -3106608 - MIR SINE MIR 0 262 23 333 0 0 0 chr11_random 380428 380465 -3105937 + (TG)n Simple_repeat Simple_repeat 2 38 0 1959 123 26 17 chr11_random 380513 380815 -3105587 - AluSx SINE Alu -7 305 1 352 245 53 73 chr11_random 380902 381053 -3105349 - MIR3 SINE MIR -60 148 1 510 276 158 13 chr11_random 382087 382315 -3104087 - LTR16A LTR ERVL 0 450 190 1955 172 0 3 chr11_random 382467 382770 -3103632 - AluJb SINE Alu -10 302 1 219 310 0 0 chr11_random 383019 383090 -3103312 + L2 LINE L2 3165 3235 -78 750 188 0 0 chr11_random 383137 383297 -3103105 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 1197 162 5 0 chr11_random 383342 383735 -3102667 + (TGGA)n Simple_repeat Simple_repeat 1 395 0 2364 57 0 14 chr11_random 384607 384924 -3101478 - AluY SINE Alu 0 311 1 334 273 33 67 chr11_random 384942 385092 -3101310 + MIR SINE MIR 72 216 -46 383 239 155 7 chr11_random 385908 386050 -3100352 - MIR SINE MIR -32 230 68 180 0 0 0 chr11_random 386113 386133 -3100269 + (TG)n Simple_repeat Simple_repeat 2 21 0 2449 75 0 0 chr11_random 387097 387392 -3099010 - AluY SINE Alu -16 295 1 201 318 67 77 chr11_random 387602 387797 -3098605 - L2 LINE L2 -190 3082 2890 2126 95 3 7 chr11_random 387960 388272 -3098130 - AluSq SINE Alu 0 311 1 207 378 12 0 chr11_random 388326 388408 -3097994 - L2 LINE L2 -666 2648 2566 1649 115 59 12 chr11_random 390526 390779 -3095623 - AluSp SINE Alu -48 265 1 1910 125 24 0 chr11_random 391341 391630 -3094772 - AluSx SINE Alu -16 296 1 1949 169 36 14 chr11_random 391797 392153 -3094249 + L1MB7 LINE L1 5812 6175 -9 2077 112 0 17 chr11_random 392154 392449 -3093953 - AluSx SINE Alu -22 290 1 987 235 66 33 chr11_random 392467 392833 -3093569 + L1MC5 LINE L1 7534 7911 -50 2362 66 0 11 chr11_random 392921 393235 -3093167 + AluY SINE Alu 1 311 0 960 201 0 6 chr11_random 393995 394169 -3092233 - FRAM SINE Alu -5 171 1 1437 237 148 5 chr11_random 394411 394816 -3091586 - L1MC4 LINE L1 -151 7891 7429 1578 109 0 0 chr11_random 394816 395017 -3091385 + AluSx SINE Alu 1 201 -111 316 116 0 0 chr11_random 395033 395076 -3091326 - Alu SINE Alu -258 44 2 2214 97 0 0 chr11_random 395244 395533 -3090869 + AluSg SINE Alu 1 289 -21 633 174 0 0 chr11_random 395639 395731 -3090671 - AluJ/FLAM SINE Alu -210 102 11 1251 150 16 0 chr11_random 395739 395932 -3090470 - MSTB LTR MaLR -230 196 1 449 175 21 196 chr11_random 395932 396088 -3090314 + L1MC5 LINE L1 6790 6892 -1069 2243 93 4 0 chr11_random 396088 396414 -3089988 + AluSc SINE Alu 1 327 0 449 175 21 196 chr11_random 396414 396496 -3089906 + L1MC5 LINE L1 6892 6987 -974 1376 176 88 10 chr11_random 396556 396851 -3089551 + L1M4 LINE L1 5362 5679 -505 2225 112 3 0 chr11_random 397172 397477 -3088925 + AluSx SINE Alu 6 311 -1 40 21 0 0 chr11_random 397500 397547 -3088855 + AT_rich Low_complexity Low_complexity 1 47 0 1664 169 7 27 chr11_random 397780 398076 -3088326 - AluJb SINE Alu -22 290 1 812 211 64 0 chr11_random 398576 398732 -3087670 - FAM SINE Alu -9 166 1 325 221 67 154 chr11_random 399082 399145 -3087257 + MER5B DNA MER1_type 1 68 -110 2204 87 42 0 chr11_random 399145 399433 -3086969 + AluSp SINE Alu 1 300 -13 325 221 67 154 chr11_random 399433 399564 -3086838 + MER5B DNA MER1_type 68 178 0 702 273 17 6 chr11_random 399577 399753 -3086649 - MER5B DNA MER1_type 0 178 1 877 211 32 11 chr11_random 399761 399946 -3086456 - MER5A DNA MER1_type 0 189 1 576 198 141 0 chr11_random 399955 400110 -3086292 - MER5A DNA MER1_type -6 183 4 1268 116 0 20 chr11_random 400274 400472 -3085930 - AluSg/x SINE Alu -6 304 111 819 136 23 23 chr11_random 400634 400766 -3085636 - AluJb SINE Alu -179 133 2 203 345 120 14 chr11_random 400835 400977 -3085425 - L2 LINE L2 -1697 1617 1461 25 0 0 28 chr11_random 401074 401093 -3085309 + AT_rich Low_complexity Low_complexity 1 20 -15 1772 126 74 0 chr11_random 401093 401364 -3085038 - AluSx SINE Alu -21 291 1 25 0 0 28 chr11_random 401364 401380 -3085022 + AT_rich Low_complexity Low_complexity 20 35 0 210 37 0 0 chr11_random 401397 401424 -3084978 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 183 228 18 123 chr11_random 401651 401765 -3084637 + L3 LINE CR1 549 650 -927 636 302 88 0 chr11_random 401839 402054 -3084348 - MIR SINE MIR -24 238 5 643 325 66 33 chr11_random 402112 402534 -3083868 + L3 LINE CR1 697 1132 -445 182 273 73 0 chr11_random 402679 402734 -3083668 + L3b LINE CR1 1428 1486 -97 397 236 163 0 chr11_random 402862 402985 -3083417 - MER5B DNA MER1_type -35 143 1 21 0 0 0 chr11_random 403633 403654 -3082748 + AT_rich Low_complexity Low_complexity 1 21 0 370 251 164 68 chr11_random 404069 404215 -3082187 + MIR SINE MIR 14 189 -73 2168 122 0 3 chr11_random 404215 404510 -3081892 + AluSx SINE Alu 1 294 -18 370 251 164 68 chr11_random 404510 404582 -3081820 + MIR SINE MIR 189 253 -9 2116 122 0 13 chr11_random 405752 406056 -3080346 + AluSx SINE Alu 1 300 -12 474 244 0 32 chr11_random 406288 406411 -3079991 + MER20 DNA MER1_type 1 119 -100 352 352 31 8 chr11_random 406875 407003 -3079399 - L2 LINE L2 -17 3255 3125 2042 91 13 30 chr11_random 407843 408141 -3078261 - AluSc SINE Alu -16 293 1 1957 107 32 11 chr11_random 408290 408570 -3077832 - AluSx SINE Alu -26 286 1 249 311 142 11 chr11_random 409634 409824 -3076578 + L1MC4a LINE L1 5407 5621 -500 977 190 56 43 chr11_random 409827 410017 -3076385 + MIR SINE MIR 3 199 -63 1863 132 4 0 chr11_random 410017 410307 -3076095 + AluSx SINE Alu 25 315 0 977 190 56 43 chr11_random 410307 410347 -3076055 + MIR SINE MIR 199 237 -25 962 261 29 14 chr11_random 410393 410669 -3075733 + L1MC4a LINE L1 5614 5893 -1915 1870 138 20 7 chr11_random 410688 410986 -3075416 + AluSx SINE Alu 1 302 -10 226 212 45 98 chr11_random 411070 411202 -3075200 + L1MC4a LINE L1 6069 6193 -1615 375 256 49 106 chr11_random 411895 412119 -3074283 - L2 LINE L2 -2 3311 3101 2325 109 3 0 chr11_random 412119 412430 -3073972 + AluSp SINE Alu 1 312 -1 375 256 49 106 chr11_random 412430 412451 -3073951 - L2 LINE L2 -212 3101 3080 2338 97 0 0 chr11_random 412499 412798 -3073604 + AluSx SINE Alu 1 299 -13 250 340 10 10 chr11_random 412821 412918 -3073484 - L2 LINE L2 -254 3059 2963 1122 161 16 5 chr11_random 413058 413250 -3073152 + AluJb SINE Alu 106 299 -13 23 33 0 0 chr11_random 413322 413352 -3073050 + AT_rich Low_complexity Low_complexity 1 30 0 206 321 47 38 chr11_random 413908 414014 -3072388 + L2 LINE L2 2755 2861 -453 210 265 176 0 chr11_random 414306 414374 -3072028 + L2 LINE L2 3231 3310 -3 198 255 109 88 chr11_random 414467 414659 -3071743 + MIR SINE MIR 17 212 -50 22 35 0 0 chr11_random 414674 414703 -3071699 + AT_rich Low_complexity Low_complexity 1 29 0 2245 92 0 0 chr11_random 414914 415237 -3071165 - AluSg SINE Alu 0 323 1 260 321 28 110 chr11_random 415793 415992 -3070410 - L2 LINE L2 -93 3179 3010 2229 114 0 13 chr11_random 415992 416308 -3070094 - AluSx SINE Alu 0 312 1 260 321 28 110 chr11_random 416308 416398 -3070004 - L2 LINE L2 -262 3010 2914 2263 130 20 0 chr11_random 416476 416821 -3069581 + L1MA4A LINE L1 5945 6296 -7 1706 167 37 0 chr11_random 417123 417423 -3068979 - AluSx SINE Alu -1 311 1 195 306 83 70 chr11_random 417834 417926 -3068476 - L2 LINE L2 -431 2883 2787 1143 187 5 0 chr11_random 417926 418113 -3068289 + MER5A DNA MER1_type 1 188 -1 195 306 83 70 chr11_random 418113 418177 -3068225 - L2 LINE L2 -527 2787 2725 196 29 0 57 chr11_random 418376 418411 -3067991 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2052 135 0 0 chr11_random 418413 418695 -3067707 - AluSx SINE Alu -30 282 1 545 272 111 74 chr11_random 418696 419049 -3067353 - L2 LINE L2 -12 3301 2936 351 307 93 94 chr11_random 419349 419565 -3066837 - L2 LINE L2 -94 3178 2963 2326 100 3 3 chr11_random 419565 419874 -3066528 + AluSx SINE Alu 1 309 -3 351 307 93 94 chr11_random 419874 420111 -3066291 - L2 LINE L2 -309 2963 2721 1011 98 8 0 chr11_random 420190 420322 -3066080 + AluSq/x SINE Alu 1 133 -179 1738 161 47 0 chr11_random 422199 422497 -3063905 + AluSx SINE Alu 1 312 0 2657 42 3 0 chr11_random 423021 423328 -3063074 + AluY SINE Alu 1 308 -3 235 310 80 0 chr11_random 423417 423517 -3062885 + L3 LINE CR1 788 895 -682 436 267 122 12 chr11_random 423593 423765 -3062637 + L3 LINE CR1 1212 1402 -175 234 365 173 0 chr11_random 423890 423994 -3062408 + L3 LINE CR1 1454 1575 -2 2216 102 0 0 chr11_random 424993 425276 -3061126 + AluSx SINE Alu 1 283 -29 1748 181 3 10 chr11_random 425707 426017 -3060385 - AluJb SINE Alu -2 310 3 1617 188 7 16 chr11_random 426032 426336 -3060066 - AluJb SINE Alu -11 301 1 1752 183 7 0 chr11_random 426337 426632 -3059770 - AluJb SINE Alu -13 299 3 3854 173 28 34 chr11_random 426717 426915 -3059487 - Charlie1 DNA MER1_type -1 2760 2562 1970 129 13 7 chr11_random 426915 427217 -3059185 - AluSq SINE Alu -9 304 1 3854 173 28 34 chr11_random 427217 427839 -3058563 - Charlie1 DNA MER1_type -199 2562 1945 449 207 25 25 chr11_random 427830 427867 -3058535 + MER3 DNA MER1_type 89 125 -84 * 1989 142 3 10 chr11_random 427867 428163 -3058239 - AluSq SINE Alu -19 294 1 449 207 25 25 chr11_random 428163 428246 -3058156 + MER3 DNA MER1_type 124 209 0 1775 159 27 17 chr11_random 428515 428810 -3057592 - AluJb SINE Alu -14 298 1 267 189 0 0 chr11_random 429162 429215 -3057187 + (TA)n Simple_repeat Simple_repeat 1 53 0 1240 174 6 70 chr11_random 429232 429548 -3056854 - AluSx SINE Alu -6 296 1 591 286 26 40 chr11_random 429698 429925 -3056477 - MIR SINE MIR -10 252 29 240 213 0 0 chr11_random 429930 429991 -3056411 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 248 309 124 0 chr11_random 430933 431030 -3055372 + L2 LINE L2 3146 3254 -18 909 14 57 14 chr11_random 431036 431177 -3055225 + (GAAA)n Simple_repeat Simple_repeat 1 147 0 350 331 32 32 chr11_random 432022 432179 -3054223 + MIR SINE MIR 3 159 -103 230 330 42 49 chr11_random 432551 432815 -3053587 + L2 LINE L2 1901 2162 -1152 2273 86 7 0 chr11_random 432833 433124 -3053278 - AluSp SINE Alu -20 293 1 960 173 12 0 chr11_random 433200 433373 -3053029 - FRAM SINE Alu 0 176 2 243 152 0 0 chr11_random 433600 433646 -3052756 + (TATATG)n Simple_repeat Simple_repeat 1 46 0 256 353 136 52 chr11_random 434368 434397 -3052005 - L3b LINE CR1 -2 1581 1556 1839 136 13 33 chr11_random 434397 434699 -3051703 - AluJo SINE Alu -16 296 1 256 353 136 52 chr11_random 434699 434941 -3051461 - L3b LINE CR1 -27 1556 1287 1894 255 46 20 chr11_random 435932 435975 -3050427 - MLT2B2 LTR ERVL 0 515 475 447 19 0 0 chr11_random 435975 436027 -3050375 + (TG)n Simple_repeat Simple_repeat 1 52 0 1894 255 46 20 chr11_random 436027 436485 -3049917 - MLT2B2 LTR ERVL -40 475 1 2539 64 0 3 chr11_random 436513 436824 -3049578 + AluY SINE Alu 1 310 -1 2198 119 0 7 chr11_random 437864 438167 -3048235 - AluJb SINE Alu -11 301 1 1956 168 3 0 chr11_random 438584 438894 -3047508 + AluJb SINE Alu 1 311 -1 25 31 0 0 chr11_random 439535 439567 -3046835 + AT_rich Low_complexity Low_complexity 1 32 0 2234 106 3 0 chr11_random 439639 439932 -3046470 + AluSx SINE Alu 1 294 -18 1102 184 32 37 chr11_random 440778 440996 -3045406 - MER20 DNA MER1_type 0 219 3 1175 188 201 21 chr11_random 441491 442060 -3044342 + LTR50 LTR ERVL 1 789 -6 234 62 0 0 chr11_random 442538 442570 -3043832 + (A)n Simple_repeat Simple_repeat 1 32 0 2326 100 3 0 chr11_random 442676 442985 -3043417 - AluSx SINE Alu -2 310 1 1790 161 20 3 chr11_random 442991 443295 -3043107 - AluJb SINE Alu -3 309 1 321 243 29 0 chr11_random 443420 443490 -3042912 - L1ME3A LINE L1 -50 6120 6049 798 273 84 57 chr11_random 443632 444275 -3042127 - L1ME3A LINE L1 -200 5962 5261 206 156 22 0 chr11_random 444518 444563 -3041839 + (CGG)n Simple_repeat Simple_repeat 2 47 0 261 253 72 96 chr11_random 446268 446434 -3039968 - L3 LINE CR1 -20 1557 1396 1536 141 14 45 chr11_random 446434 446724 -3039678 - AluJb SINE Alu -15 297 17 30 45 0 0 chr11_random 448213 448257 -3038145 + AT_rich Low_complexity Low_complexity 1 44 0 793 188 0 0 chr11_random 448260 448377 -3038025 - FLAM_C SINE Alu -25 118 2 923 213 52 5 chr11_random 448717 448928 -3037474 + MIR SINE MIR 7 227 -35 2328 80 0 20 chr11_random 448952 449251 -3037151 - AluSc SINE Alu -16 293 1 239 323 43 50 chr11_random 449491 449652 -3036750 - MIR3 SINE MIR -28 180 21 389 274 28 9 chr11_random 450027 450133 -3036269 - MIR SINE MIR -71 191 84 393 279 235 30 chr11_random 450540 450885 -3035517 - L1ME LINE L1 -413 5757 5351 312 286 11 51 chr11_random 450877 450943 -3035459 - L1MC4a LINE L1 -1910 5898 5831 * 1954 175 21 9 chr11_random 450943 451281 -3035121 - MER2 DNA MER2_type -1 343 2 312 286 11 51 chr11_random 451281 451392 -3035010 - L1MC4a LINE L1 -1977 5831 5728 1764 150 45 3 chr11_random 451392 451679 -3034723 - AluSx SINE Alu -13 299 1 219 337 0 0 chr11_random 451721 451807 -3034595 - L2 LINE L2 -769 2545 2460 700 269 78 5 chr11_random 451819 452038 -3034364 - MIR SINE MIR 0 262 28 21 0 0 0 chr11_random 453197 453218 -3033184 + AT_rich Low_complexity Low_complexity 1 21 0 381 264 121 7 chr11_random 453310 453450 -3032952 - MIR SINE MIR -54 208 53 2369 85 0 0 chr11_random 453962 454255 -3032147 - AluY SINE Alu -18 293 1 25 51 0 0 chr11_random 455334 455373 -3031029 + AT_rich Low_complexity Low_complexity 1 39 0 603 246 74 29 chr11_random 455431 455606 -3030796 - MIR3 SINE MIR -5 203 21 2141 97 50 7 chr11_random 455672 455971 -3030431 + AluSx SINE Alu 1 312 0 852 88 0 0 chr11_random 457891 458004 -3028398 + AluSg/x SINE Alu 195 307 -2 807 202 54 108 chr11_random 458431 458481 -3027921 - MIR SINE MIR -15 247 196 2238 99 0 0 chr11_random 458481 458788 -3027614 - AluSg SINE Alu 0 307 1 807 202 54 108 chr11_random 458788 458851 -3027551 - MIR SINE MIR -66 196 131 1661 169 3 35 chr11_random 458851 459165 -3027237 - AluJb SINE Alu -8 304 1 807 202 54 108 chr11_random 459165 459307 -3027095 - MIR SINE MIR -131 131 4 246 208 0 19 chr11_random 459578 459631 -3026771 - MIR3 SINE MIR -2 206 155 254 372 54 14 chr11_random 459748 459896 -3026506 + L2 LINE L2 3117 3270 -2 490 206 20 0 chr11_random 460019 460121 -3026281 + MIR SINE MIR 80 183 -79 297 293 101 60 chr11_random 460425 460878 -3025524 + L2 LINE L2 2773 3313 0 23 54 0 0 chr11_random 461117 461154 -3025248 + AT_rich Low_complexity Low_complexity 1 37 0 240 256 93 62 chr11_random 461193 461322 -3025080 - L2 LINE L2 -2 3311 3179 241 270 74 61 chr11_random 461360 461523 -3024879 - MIR SINE MIR -51 211 47 225 0 0 0 chr11_random 462145 462170 -3024232 + (T)n Simple_repeat Simple_repeat 1 25 0 6597 128 59 62 chr11_random 462624 463227 -3023175 - Tigger3b DNA MER2_type -1797 1231 628 2500 64 0 0 chr11_random 463227 463523 -3022879 + AluY SINE Alu 1 296 -15 6597 128 59 62 chr11_random 463523 463772 -3022630 - Tigger3b DNA MER2_type -2400 628 380 2840 13 0 0 chr11_random 463772 464081 -3022321 + AluYa5 SINE Alu 1 309 -2 6597 128 59 62 chr11_random 464081 464164 -3022238 - Tigger3b DNA MER2_type -2648 380 298 1783 166 3 26 chr11_random 464164 464466 -3021936 + AluSx SINE Alu 1 295 -17 6597 128 59 62 chr11_random 464466 464477 -3021925 - Tigger3b DNA MER2_type -2730 298 288 2614 130 35 26 chr11_random 464477 464901 -3021501 - MSTA LTR MaLR 0 428 1 6597 128 59 62 chr11_random 464901 465183 -3021219 - Tigger3b DNA MER2_type -2740 288 4 1813 147 7 23 chr11_random 465470 465769 -3020633 - AluJo SINE Alu -18 294 1 3505 107 23 16 chr11_random 668322 668894 -2817508 - THE1B-int LTR MaLR -93 1487 912 1243 106 98 25 chr11_random 668884 669129 -2817273 - THE1B-int LTR MaLR -1317 263 1 * 609 34 22 11 chr11_random 669129 669218 -2817184 - THE1B LTR MaLR 0 364 275 21 82 0 0 chr11_random 671820 671869 -2814533 + GC_rich Low_complexity Low_complexity 1 49 0 243 88 0 0 chr11_random 672153 672187 -2814215 + (A)n Simple_repeat Simple_repeat 1 34 0 220 262 0 0 chr11_random 672187 672229 -2814173 + polypurine Low_complexity Low_complexity 3 44 0 241 246 18 61 chr11_random 673250 673364 -2813038 + G-rich Low_complexity Low_complexity 4 112 0 265 202 238 0 chr11_random 678275 678359 -2808043 - L2 LINE L2 -1 3271 3168 420 335 148 32 chr11_random 678569 679101 -2807301 - L2 LINE L2 -462 2852 2259 379 371 38 3 chr11_random 679624 679782 -2806620 - L1M4 LINE L1 -773 5373 5222 1395 149 134 4 chr11_random 679782 679932 -2806470 - AluJo SINE Alu -16 296 167 197 0 71 0 chr11_random 679932 679960 -2806442 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 1395 149 134 4 chr11_random 679960 680071 -2806331 - AluJo SINE Alu -145 167 1 379 371 38 3 chr11_random 680071 680225 -2806177 - L1M4 LINE L1 -924 5222 5050 481 170 211 55 chr11_random 680227 680445 -2805957 - Charlie5 DNA MER1_type -27 2585 2334 295 269 59 25 chr11_random 680499 680618 -2805784 - L1M4 LINE L1 -1127 5019 4897 396 367 37 21 chr11_random 680619 680807 -2805595 - L1M4 LINE L1 -2865 3281 3091 532 265 76 5 chr11_random 680853 681038 -2805364 - L1M4 LINE L1 -3167 2979 2782 2232 72 0 7 chr11_random 684206 684525 -2801877 - AluY SINE Alu 0 311 1 1298 181 15 34 chr11_random 685040 685306 -2801096 - AluJo SINE Alu -22 290 30 222 167 0 51 chr11_random 690395 690473 -2795929 + (CCCTAA)n Simple_repeat Simple_repeat 1 74 0 319 247 6 39 chr11_random 690869 691094 -2795308 + (CCCCG)n Simple_repeat Simple_repeat 1 217 0 225 143 41 0 chr11_random 692938 692987 -2793415 + A-rich Low_complexity Low_complexity 5 55 0 1046 168 7 5 chr11_random 697001 697422 -2788980 + (CAGCC)n Simple_repeat Simple_repeat 1 422 0 240 257 0 40 chr11_random 698536 698637 -2787765 + G-rich Low_complexity Low_complexity 3 99 0 222 230 11 46 chr11_random 698715 698802 -2787600 + G-rich Low_complexity Low_complexity 3 86 0 240 255 205 0 chr11_random 707819 707980 -2778422 + MLT1F LTR MaLR 246 439 -103 255 277 50 25 chr11_random 709044 709163 -2777239 + MLT1B LTR MaLR 1 122 -504 275 221 101 0 chr11_random 709502 709607 -2776795 + MLT1B LTR MaLR 252 337 -53 180 0 0 0 chr11_random 711035 711055 -2775347 + (GGCTG)n Simple_repeat Simple_repeat 2 21 0 248 229 82 0 chr11_random 713413 713474 -2772928 + MLT1I LTR MaLR 113 178 -231 233 183 17 0 chr11_random 714735 714795 -2771607 + (TG)n Simple_repeat Simple_repeat 1 61 0 2123 77 24 30 chr11_random 715614 715911 -2770491 + AluY SINE Alu 1 295 -16 275 242 10 0 chr11_random 716316 716415 -2769987 + (TG)n Simple_repeat Simple_repeat 1 100 0 258 183 0 0 chr11_random 718180 718251 -2768151 + (TG)n Simple_repeat Simple_repeat 1 71 0 294 282 0 0 chr11_random 718339 718509 -2767893 + (TG)n Simple_repeat Simple_repeat 2 171 0 330 337 70 11 chr11_random 721777 721964 -2764438 - L2 LINE L2 -155 3117 2920 182 188 0 0 chr11_random 722317 722349 -2764053 + MIR SINE MIR 118 149 -113 421 325 0 13 chr11_random 722572 722729 -2763673 + (TG)n Simple_repeat Simple_repeat 1 155 0 379 272 4 27 chr11_random 722776 723319 -2763083 + (TG)n Simple_repeat Simple_repeat 1 530 0 375 303 27 0 chr11_random 727505 727848 -2758554 + G-rich Low_complexity Low_complexity 1 352 0 261 328 48 42 chr11_random 731536 731725 -2754677 + MLT1D LTR MaLR 3 192 -313 467 190 146 0 chr11_random 731913 732050 -2754352 + MLT1D-int LTR MaLR 1 157 -1214 1199 195 42 4 chr11_random 732919 733160 -2753242 - AluJo SINE Alu -32 280 31 493 238 20 137 chr11_random 733179 733478 -2752924 + MLT1D-int LTR MaLR 1084 1347 -24 348 254 215 52 chr11_random 733532 733937 -2752465 + MLT1D LTR MaLR 30 500 -5 470 197 55 24 chr11_random 735584 735711 -2750691 + MER20 DNA MER1_type 1 131 -88 246 192 0 0 chr11_random 736359 736411 -2749991 + (CACG)n Simple_repeat Simple_repeat 1 52 0 2016 132 3 10 chr11_random 736609 736913 -2749489 - AluSx SINE Alu -10 302 1 468 272 99 47 chr11_random 736913 737126 -2749276 + HAL1 LINE L1 943 1166 -1341 252 86 0 0 chr11_random 737528 737563 -2748839 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 226 335 52 26 chr11_random 737699 737929 -2748473 + L1MCc LINE L1 1176 1411 -5012 452 328 129 49 chr11_random 739078 739363 -2747039 + L1MCc LINE L1 1670 1931 -5088 2191 110 0 0 chr11_random 739363 739663 -2746739 - AluSg SINE Alu -10 300 1 452 328 129 49 chr11_random 739663 740016 -2746386 + L1MCc LINE L1 1931 2399 -4620 348 228 44 9 chr11_random 740292 740406 -2745996 - Charlie1 DNA MER1_type -21 2740 2623 511 176 12 0 chr11_random 741029 741114 -2745288 + AluJb SINE Alu 208 293 -19 573 329 54 0 chr11_random 741123 741145 -2745257 + L1MB5 LINE L1 5587 5606 -568 2409 70 0 0 chr11_random 741145 741444 -2744958 + AluY SINE Alu 1 299 -12 573 329 54 0 chr11_random 741444 741756 -2744646 + L1MB5 LINE L1 5606 5939 -235 470 188 152 0 chr11_random 741820 741932 -2744470 + L1MB5 LINE L1 6039 6167 -7 396 212 212 44 chr11_random 741935 742138 -2744264 + MER97a DNA MER1_type? 106 342 -552 350 282 39 47 chr11_random 742300 742534 -2743868 + MER97a DNA MER1_type? 579 810 -84 343 273 68 74 chr11_random 748999 749175 -2737227 + L1ME4a LINE L1 5266 5440 -722 304 330 10 21 chr11_random 750097 750194 -2736208 + L1ME4a LINE L1 6026 6121 0 1223 142 16 0 chr11_random 750853 751036 -2735366 + AluJo SINE Alu 3 188 -124 441 251 139 0 chr11_random 751862 752077 -2734325 - HAL1 LINE L1 -800 1707 1463 465 209 25 2 chr11_random 752078 752197 -2734205 + MSTD LTR MaLR 1 129 -245 352 153 11 93 chr11_random 752198 752381 -2734021 + G-rich Low_complexity Low_complexity 5 172 0 720 218 225 11 chr11_random 752381 752652 -2733750 + MSTD LTR MaLR 65 393 -3 321 266 217 4 chr11_random 752670 752914 -2733488 - HAL1 LINE L1 -1046 1461 1166 338 331 65 22 chr11_random 753097 753236 -2733166 - HAL1 LINE L1 -1591 916 772 279 286 80 0 chr11_random 753266 753378 -2733024 + HAL1 LINE L1 1304 1424 -1083 368 289 81 0 chr11_random 753774 753947 -2732455 - HAL1 LINE L1 -2274 233 47 286 221 229 13 chr11_random 755319 755455 -2730947 + MIR SINE MIR 3 156 -52 262 247 49 37 chr11_random 757782 757863 -2728539 + L1M3 LINE L1 5716 5797 -371 291 295 62 18 chr11_random 757976 758088 -2728314 - MER5A DNA MER1_type -29 160 44 1706 176 70 0 chr11_random 758095 758465 -2727937 + MER57A LTR ERV1 8 403 0 901 193 85 27 chr11_random 759434 759657 -2726745 + AluJo SINE Alu 76 311 -1 417 250 34 45 chr11_random 760235 760411 -2725991 + L1MC4 LINE L1 7869 8042 0 478 365 55 41 chr11_random 760414 760759 -2725643 + L1MEc LINE L1 1448 1797 -4599 580 332 60 35 chr11_random 761144 761575 -2724827 - L1ME1 LINE L1 -192 5974 5533 812 182 18 10 chr11_random 762090 762327 -2724075 - L1M3 LINE L1 -743 5403 5198 456 326 33 15 chr11_random 762457 762727 -2723675 - L1MEc LINE L1 -5334 1062 788 204 231 0 0 chr11_random 762748 762800 -2723602 + (CA)n Simple_repeat Simple_repeat 1 52 0 345 265 119 19 chr11_random 763176 763436 -2722966 - L1MC5 LINE L1 -177 7784 7499 308 305 53 0 chr11_random 763436 763531 -2722871 - L1MD3 LINE L1 -19 7976 7877 482 259 69 41 chr11_random 763625 763915 -2722487 - L1MC5 LINE L1 -467 7494 7197 496 202 33 47 chr11_random 763915 764077 -2722325 - MLT1A2 LTR MaLR -219 155 1 4285 260 101 39 chr11_random 764334 765755 -2720647 - L1ME2 LINE L1 0 6233 4901 2218 98 0 3 chr11_random 765755 766076 -2720326 + AluSq SINE Alu 1 313 0 4285 260 101 39 chr11_random 766076 767830 -2718572 - L1ME2 LINE L1 -1332 4901 3257 1764 136 35 3 chr11_random 767830 768117 -2718285 + AluSx SINE Alu 1 296 -16 4285 260 101 39 chr11_random 768117 768420 -2717982 - L1ME2 LINE L1 -2976 3257 649 304 384 50 28 chr11_random 768499 768822 -2717580 - L1ME2 LINE L1 -5831 565 236 273 329 67 6 chr11_random 768845 769009 -2717393 - L1ME2 LINE L1 -6222 174 1 2332 109 0 0 chr11_random 769127 769439 -2716963 - AluSq SINE Alu -1 312 1 283 285 41 0 chr11_random 769595 769767 -2716635 + (TG)n Simple_repeat Simple_repeat 2 180 0 * 307 275 17 28 chr11_random 769745 769923 -2716479 + (TCTCTG)n Simple_repeat Simple_repeat 1 176 0 * 380 246 47 0 chr11_random 769802 769973 -2716429 + (TG)n Simple_repeat Simple_repeat 2 180 0 793 251 45 30 chr11_random 770199 770466 -2715936 + L1MC3 LINE L1 6461 6731 -1054 1088 223 7 41 chr11_random 770486 770755 -2715647 - AluJo SINE Alu -52 260 1 1886 157 0 0 chr11_random 770785 771071 -2715331 - AluJo SINE Alu -26 286 1 2334 60 0 47 chr11_random 771072 771391 -2715011 - AluY SINE Alu -7 304 1 1723 294 42 6 chr11_random 771400 772050 -2714352 + L1MC3 LINE L1 6726 7398 -387 469 237 124 6 chr11_random 772055 772224 -2714178 + L1MC3 LINE L1 7589 7777 -8 217 329 0 0 chr11_random 775557 775642 -2710760 + (TG)n Simple_repeat Simple_repeat 1 85 0 216 200 0 0 chr11_random 776046 776091 -2710311 + (TG)n Simple_repeat Simple_repeat 1 45 0 254 159 29 87 chr11_random 776641 776710 -2709692 + MER5A DNA MER1_type 57 121 -68 196 151 55 0 chr11_random 779577 779650 -2706752 + C-rich Low_complexity Low_complexity 1 77 0 531 270 90 49 chr11_random 782554 782913 -2703489 + L1M4c LINE L1 1424 1897 -4643 247 293 55 24 chr11_random 783301 783465 -2702937 + L1M4c LINE L1 2365 2533 -4007 583 260 72 100 chr11_random 783537 783898 -2702504 - MLT1A1 LTR MaLR 0 365 15 1463 307 97 24 chr11_random 783932 785023 -2701379 + L1M4c LINE L1 2655 3825 -2715 256 159 48 0 chr11_random 785032 785095 -2701307 + L1M4c LINE L1 4527 4592 -1948 699 201 8 0 chr11_random 785110 785244 -2701158 + Tigger7 DNA MER2_type 32 166 -539 1400 202 148 24 chr11_random 785293 785719 -2700683 + Tigger7 DNA MER2_type 262 740 -1747 611 178 65 0 chr11_random 785746 785853 -2700549 + FLAM_A SINE Alu 2 115 -18 597 203 8 0 chr11_random 785877 786000 -2700402 + Tigger7 DNA MER2_type 2364 2487 0 1263 284 72 62 chr11_random 786046 787216 -2699186 + L1M4c LINE L1 4662 5848 -712 450 137 0 0 chr11_random 790659 790754 -2695648 + (GA)n Simple_repeat Simple_repeat 2 96 0 333 393 94 0 chr11_random 790756 790957 -2695445 + L1 LINE L1 4476 4695 -1451 2260 56 7 3 chr11_random 791160 791467 -2694935 + AluY SINE Alu 9 311 0 1537 271 70 32 chr11_random 791468 792128 -2694274 - L1M4 LINE L1 -1958 4188 3504 737 108 62 31 chr11_random 794357 794650 -2691752 + (CTCGG)n Simple_repeat Simple_repeat 1 302 0 27 0 0 0 chr11_random 794675 794702 -2691700 + GC_rich Low_complexity Low_complexity 1 27 0 243 0 0 0 chr11_random 794703 794730 -2691672 + (CGG)n Simple_repeat Simple_repeat 1 27 0 206 168 67 34 chr11_random 794815 794934 -2691468 + (CGCGG)n Simple_repeat Simple_repeat 5 127 0 25 51 0 0 chr11_random 794942 794981 -2691421 + GC_rich Low_complexity Low_complexity 1 39 0 38 96 0 0 chr11_random 795084 795199 -2691203 + GC_rich Low_complexity Low_complexity 1 115 0 25 102 0 0 chr11_random 795302 795390 -2691012 + GC_rich Low_complexity Low_complexity 1 88 0 406 349 0 0 chr11_random 800931 801106 -2685296 + C-rich Low_complexity Low_complexity 2 176 0 287 179 90 0 chr11_random 805136 805203 -2681199 - MER5A DNA MER1_type -100 89 17 941 128 0 0 chr11_random 805570 805711 -2680691 + AluSp/q SINE Alu 165 305 -8 285 306 62 51 chr11_random 805716 805991 -2680411 + L1ME1 LINE L1 4225 4502 -1644 23 33 0 0 chr11_random 805994 806024 -2680378 + AT_rich Low_complexity Low_complexity 1 30 0 1479 182 0 62 chr11_random 806062 806175 -2680227 + AluJo SINE Alu 2 120 -192 1700 177 186 0 chr11_random 806175 806536 -2679866 + MSTA LTR MaLR 1 428 0 1479 182 0 62 chr11_random 806536 806729 -2679673 + AluJo SINE Alu 120 289 -23 1525 278 26 2 chr11_random 806755 807208 -2679194 + L1ME1 LINE L1 5511 5974 -192 207 0 0 0 chr11_random 807429 807452 -2678950 + (TGGG)n Simple_repeat Simple_repeat 2 24 0 2053 116 0 10 chr11_random 807532 807667 -2678735 + AluSx SINE Alu 1 136 -176 1899 72 35 88 chr11_random 807667 807985 -2678417 + AluY SINE Alu 1 301 -10 2053 116 0 10 chr11_random 807985 808151 -2678251 + AluSx SINE Alu 136 299 -13 209 288 30 0 chr11_random 810035 810101 -2676301 - MIR3 SINE MIR -53 155 88 338 226 60 38 chr11_random 810267 810400 -2676002 - L1ME4a LINE L1 -22 6099 5964 746 194 23 46 chr11_random 810443 810660 -2675742 - L1MB8 LINE L1 -3 6175 5964 2114 98 44 0 chr11_random 810664 810961 -2675441 - AluSx SINE Alu 0 312 3 1340 248 13 31 chr11_random 810964 811347 -2675055 - L1MB7 LINE L1 -46 6138 5763 4776 204 15 51 chr11_random 811369 811650 -2674752 - L1MB7 LINE L1 -1490 4656 4366 2450 77 0 0 chr11_random 811650 811961 -2674441 - AluY SINE Alu 0 311 1 4776 204 15 51 chr11_random 811961 812324 -2674078 - L1MB7 LINE L1 -1780 4366 3991 2413 70 0 3 chr11_random 812324 812625 -2673777 + AluY SINE Alu 1 300 -11 4776 204 15 51 chr11_random 812625 812666 -2673736 - L1MB7 LINE L1 -2155 3991 3950 2179 105 3 16 chr11_random 812666 812980 -2673422 + AluSg SINE Alu 1 310 0 4776 204 15 51 chr11_random 812980 813311 -2673091 - L1MB7 LINE L1 -2196 3950 3695 2218 84 10 26 chr11_random 813311 813622 -2672780 - AluSx SINE Alu -6 306 1 4776 204 15 51 chr11_random 813622 813936 -2672466 - L1MB7 LINE L1 -2451 3695 3371 458 287 191 19 chr11_random 814027 814356 -2672046 + L2 LINE L2 2644 3030 -283 2177 186 18 0 chr11_random 814357 814739 -2671663 - MLT1B LTR MaLR 0 390 2 1724 146 23 0 chr11_random 814753 815013 -2671389 - AluJb SINE Alu -46 266 1 359 293 168 22 chr11_random 815123 815344 -2671058 - L1M LINE L1 -733 5429 5177 1901 140 0 55 chr11_random 815372 815700 -2670702 - AluSx SINE Alu -2 310 1 1889 185 103 3 chr11_random 817017 817406 -2668996 - MSTA LTR MaLR 0 428 1 1691 113 9 118 chr11_random 818593 818922 -2667480 - AluJo SINE Alu -8 294 2 689 224 59 0 chr11_random 820286 820456 -2665946 + MLT1B LTR MaLR 5 184 -206 22 0 0 0 chr11_random 820458 820480 -2665922 + GC_rich Low_complexity Low_complexity 1 22 0 222 118 0 0 chr11_random 821694 821728 -2664674 + (TCC)n Simple_repeat Simple_repeat 2 35 0 1267 197 18 10 chr11_random 823487 823875 -2662527 + MER66B LTR ERV1 1 486 0 2263 94 0 3 chr11_random 824231 824530 -2661872 + AluY SINE Alu 1 298 -13 479 321 19 24 chr11_random 824580 824890 -2661512 - L1ME2 LINE L1 -2 6162 5852 4007 90 0 4 chr11_random 824920 825433 -2660969 + MER9 LTR ERVK 1 511 0 820 178 0 55 chr11_random 825513 825676 -2660726 - L1MB3 LINE L1 0 6183 6030 389 135 0 27 chr11_random 825684 825758 -2660644 - L1MB3 LINE L1 -82 6101 6030 393 135 0 27 chr11_random 825766 825840 -2660562 - L1MB3 LINE L1 -82 6101 6030 390 135 0 27 chr11_random 825848 825922 -2660480 - L1MB3 LINE L1 -82 6101 6030 415 108 0 27 chr11_random 825930 826004 -2660398 - L1MB3 LINE L1 -82 6101 6030 400 122 0 27 chr11_random 826012 826086 -2660316 - L1MB3 LINE L1 -82 6101 6030 1244 165 21 34 chr11_random 826094 826385 -2660017 - L1MB3 LINE L1 -82 6101 5815 1258 106 96 24 chr11_random 826413 826621 -2659781 - AluJo SINE Alu -75 237 15 386 125 42 0 chr11_random 826623 826695 -2659707 - L1MB3 LINE L1 -339 5832 5758 1728 188 57 17 chr11_random 828473 828824 -2657578 - MLT1A1 LTR MaLR 0 365 1 262 348 11 0 chr11_random 829059 829148 -2657254 - ERVL LTR ERVL -3790 1974 1885 2108 119 3 3 chr11_random 829173 829491 -2656911 - AluSx SINE Alu 0 312 1 925 345 39 20 chr11_random 829502 830047 -2656355 + ERVL LTR ERVL 2383 2937 -2827 903 144 20 7 chr11_random 830056 830209 -2656193 + FRAM SINE Alu 1 154 -22 941 337 76 6 chr11_random 830260 830735 -2655667 + ERVL LTR ERVL 2985 3492 -2272 693 355 45 23 chr11_random 830905 831345 -2655057 + ERVL LTR ERVL 3572 4021 -1743 583 311 130 9 chr11_random 831400 831824 -2654578 + ERVL LTR ERVL 4080 4554 -1100 2462 80 0 0 chr11_random 832297 832609 -2653793 - AluSx SINE Alu 0 312 1 231 36 0 0 chr11_random 832813 832841 -2653561 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1511 161 4 4 chr11_random 832845 833094 -2653308 - L1PB1 LINE L1 -8 6143 5895 322 288 102 60 chr11_random 833873 834186 -2652216 + L1M4 LINE L1 3852 4150 -1996 2390 67 0 13 chr11_random 834186 834501 -2651901 + AluY SINE Alu 1 311 0 322 288 102 60 chr11_random 834501 834822 -2651580 + L1M4 LINE L1 4150 4513 -1633 758 148 0 11 chr11_random 834826 835008 -2651394 + (GA)n Simple_repeat Simple_repeat 1 180 0 2576 30 0 7 chr11_random 835414 835719 -2650683 + AluYa5 SINE Alu 9 311 0 1090 160 6 0 chr11_random 835719 835894 -2650508 + AluJb SINE Alu 124 299 -13 2317 66 10 3 chr11_random 835917 836220 -2650182 + AluY SINE Alu 1 305 -6 358 247 86 23 chr11_random 836533 836707 -2649695 + MER63A DNA MER1_type 21 205 -5 745 234 147 7 chr11_random 837222 837529 -2648873 - MLT1A1 LTR MaLR -13 352 3 182 146 0 85 chr11_random 838296 838378 -2648024 + (TGGGGG)n Simple_repeat Simple_repeat 5 79 0 182 36 0 36 chr11_random 838447 838475 -2647927 + (TGGGGG)n Simple_repeat Simple_repeat 5 31 0 335 156 0 142 chr11_random 838502 838707 -2647695 + G-rich Low_complexity Low_complexity 5 180 0 2069 126 7 10 chr11_random 839628 839937 -2646465 + AluSx SINE Alu 5 312 0 242 289 53 0 chr11_random 839951 840027 -2646375 + L1MC/D LINE L1 5726 5805 -2003 311 287 204 12 chr11_random 840072 840239 -2646163 - MIR SINE MIR -1 261 63 339 149 96 64 chr11_random 842819 842913 -2643489 - LTR26 LTR ERV1 -253 350 254 2143 100 28 7 chr11_random 842913 843202 -2643200 - AluSx SINE Alu -17 295 1 502 279 136 27 chr11_random 843511 843878 -2642524 - L1MC4 LINE L1 -827 6981 6613 200 273 45 45 chr11_random 844138 844314 -2642088 + C-rich Low_complexity Low_complexity 4 179 0 397 326 73 19 chr11_random 844660 844921 -2641481 - L1MC4a LINE L1 -1317 6491 6217 1788 188 42 16 chr11_random 844932 845003 -2641399 - Tigger2a DNA MER2_type -2276 432 364 1798 158 7 0 chr11_random 845003 845281 -2641121 - AluJo SINE Alu -32 280 1 1788 188 42 16 chr11_random 845281 845592 -2640810 - Tigger2a DNA MER2_type -2344 364 40 2369 79 0 16 chr11_random 845772 846077 -2640325 - AluY SINE Alu -11 300 1 474 244 45 62 chr11_random 846330 846506 -2639896 - HsTC2 DNA Tc2 -537 1361 1189 323 244 7 107 chr11_random 846726 846876 -2639526 + L1MB7 LINE L1 3857 3991 -2155 1006 192 96 69 chr11_random 847182 847478 -2638924 + MLT1B LTR MaLR 43 350 -40 2153 110 0 17 chr11_random 847478 847777 -2638625 - AluSx SINE Alu -18 294 1 1006 192 96 69 chr11_random 847777 847814 -2638588 + MLT1B LTR MaLR 350 385 -5 1033 127 18 30 chr11_random 847897 848063 -2638339 + AluJb SINE Alu 129 292 -20 418 273 92 20 chr11_random 848110 848359 -2638043 + L1MB7 LINE L1 4304 4570 -1576 405 245 0 0 chr11_random 849780 850077 -2636325 + (TG)n Simple_repeat Simple_repeat 1 297 0 363 233 0 0 chr11_random 850089 850265 -2636137 + (TG)n Simple_repeat Simple_repeat 2 177 0 196 196 0 21 chr11_random 850286 850383 -2636019 + (TG)n Simple_repeat Simple_repeat 2 96 0 262 257 0 20 chr11_random 850396 850497 -2635905 + (TG)n Simple_repeat Simple_repeat 1 99 0 191 268 107 27 chr11_random 850719 850831 -2635571 + L2 LINE L2 3193 3313 0 303 93 0 0 chr11_random 850989 851032 -2635370 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 2159 137 16 0 chr11_random 851037 851344 -2635058 - AluSx SINE Alu 0 312 1 345 206 41 0 chr11_random 851832 851905 -2634497 + MIR SINE MIR 70 145 -117 2084 186 78 42 chr11_random 852307 852678 -2633724 + L1MB7 LINE L1 4963 5319 -865 2371 75 7 7 chr11_random 852678 852973 -2633429 + AluY SINE Alu 1 295 -16 2084 186 78 42 chr11_random 852973 853435 -2632967 + L1MB7 LINE L1 5319 5825 -359 439 151 11 75 chr11_random 853439 853532 -2632870 + L1M3 LINE L1 5656 5742 -429 318 274 30 30 chr11_random 854234 854252 -2632150 - L1MA10 LINE L1 0 6334 6317 8866 240 52 44 chr11_random 854252 854459 -2631943 - L1ME1 LINE L1 -10 6225 6021 2488 98 68 24 chr11_random 854459 854868 -2631534 + MSTA LTR MaLR 1 427 -1 8866 240 52 44 chr11_random 854868 855446 -2630956 - L1ME1 LINE L1 -214 6021 5450 2310 109 0 13 chr11_random 855446 855750 -2630652 - AluSx SINE Alu -12 300 1 8866 240 52 44 chr11_random 855750 856265 -2630137 - L1ME1 LINE L1 -785 5450 4941 2307 173 17 22 chr11_random 856265 856679 -2629723 + L1MB2 LINE L1 5706 6119 -52 1340 167 89 60 chr11_random 856679 856961 -2629441 + AluJb SINE Alu 1 290 -22 2307 173 17 22 chr11_random 856961 857009 -2629393 + L1MB2 LINE L1 6119 6166 -5 8866 240 52 44 chr11_random 857009 857156 -2629246 - L1ME1 LINE L1 -1294 4941 4797 2375 108 0 9 chr11_random 857156 857471 -2628931 - AluSx SINE Alu 0 312 1 8866 240 52 44 chr11_random 857471 857715 -2628687 - L1ME1 LINE L1 -1438 4797 4557 2045 129 0 3 chr11_random 857715 858010 -2628392 - AluSx SINE Alu -18 294 1 8866 240 52 44 chr11_random 858010 860060 -2626342 - L1ME1 LINE L1 -1678 4557 2441 1462 254 62 5 chr11_random 860062 860467 -2625935 - L1ME1 LINE L1 -5785 611 184 2173 169 27 15 chr11_random 860567 861303 -2625099 + L1MB3 LINE L1 1614 2450 -3934 2427 95 0 0 chr11_random 861304 861599 -2624803 + AluY SINE Alu 1 295 -16 3843 234 25 14 chr11_random 861599 862787 -2623615 + L1MB3 LINE L1 2651 3852 -2530 1597 120 12 4 chr11_random 862797 863039 -2623363 - THE1B LTR MaLR 0 364 121 5102 232 55 48 chr11_random 863048 864246 -2622156 + L1MB3 LINE L1 3858 5072 -1310 2166 117 7 3 chr11_random 864246 864546 -2621856 - AluSq SINE Alu -12 301 1 5102 232 55 48 chr11_random 864546 865066 -2621336 + L1MB3 LINE L1 5072 5587 -795 2384 109 0 0 chr11_random 865066 865498 -2620904 - AluSx SINE Alu 0 432 1 2417 251 72 19 chr11_random 865498 866266 -2620136 + L1MB3 LINE L1 5572 6379 -40 2437 78 0 0 chr11_random 866268 866561 -2619841 + AluSc SINE Alu 6 298 -11 736 139 9 0 chr11_random 866574 866689 -2619713 + FLAM_C SINE Alu 6 121 -22 198 0 0 0 chr11_random 866689 866711 -2619691 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1026 280 53 2 chr11_random 869704 870158 -2616244 - L1MB3 LINE L1 -84 6099 5623 298 250 20 10 chr11_random 870159 870259 -2616143 - L1MB3 LINE L1 -622 5549 5449 279 277 34 25 chr11_random 872180 872299 -2614103 - L1ME LINE L1 -622 5824 5705 1289 52 0 7 chr11_random 872703 872856 -2613546 + AluY SINE Alu 1 152 -159 2453 91 3 0 chr11_random 873411 873719 -2612683 - AluSg SINE Alu -1 309 1 502 246 56 50 chr11_random 874331 874688 -2611714 - L1ME LINE L1 -1331 5095 4737 841 256 185 21 chr11_random 874829 875208 -2611194 + LTR33 LTR ERVL 32 472 -49 4498 213 78 92 chr11_random 875210 875540 -2610862 - L1MCa LINE L1 -3302 3124 2791 2209 133 0 0 chr11_random 875540 875849 -2610553 - AluSg SINE Alu -1 309 1 4498 213 78 92 chr11_random 875849 876086 -2610316 - L1MCa LINE L1 -3635 2791 2552 2310 82 7 0 chr11_random 876086 876410 -2609992 - AluSp SINE Alu 0 326 1 4498 213 78 92 chr11_random 876410 876593 -2609809 - L1MCa LINE L1 -3874 2552 2368 2159 127 41 36 chr11_random 876593 876955 -2609447 + THE1B LTR MaLR 1 364 0 4498 213 78 92 chr11_random 876955 877887 -2608515 - L1MCa LINE L1 -4058 2368 1424 1342 122 0 0 chr11_random 877887 878068 -2608334 - AluSq SINE Alu -1 312 132 2507 73 0 10 chr11_random 878068 878382 -2608020 - AluY SINE Alu 0 311 1 4498 213 78 92 chr11_random 878382 879095 -2607307 - L1MCa LINE L1 -5000 1426 575 1582 165 0 18 chr11_random 879100 879379 -2607023 - L1MCa LINE L1 -5811 615 342 1309 174 41 90 chr11_random 879521 879830 -2606572 - L1MCa LINE L1 -6063 363 71 2415 78 3 3 chr11_random 879830 880125 -2606277 - AluY SINE Alu -16 295 1 1309 174 41 90 chr11_random 880125 880160 -2606242 - L1MCa LINE L1 -6355 71 36 226 236 18 0 chr11_random 880165 880220 -2606182 + LTR33 LTR ERVL 466 521 0 2046 205 66 35 chr11_random 880560 880816 -2605586 - MER90 LTR ERV1 0 614 367 2321 108 0 3 chr11_random 880816 881130 -2605272 - AluSq SINE Alu 0 313 1 2046 205 66 35 chr11_random 881130 881419 -2604983 - MER90 LTR ERV1 -247 367 52 2245 105 17 0 chr11_random 881853 882148 -2604254 + AluSx SINE Alu 1 300 -12 13965 171 16 29 chr11_random 882151 882654 -2603748 + L1 LINE L1 2376 2884 -3262 2321 98 10 0 chr11_random 882654 882960 -2603442 + AluSx SINE Alu 2 310 -2 13965 171 16 29 chr11_random 882960 883630 -2602772 + L1 LINE L1 2884 3561 -2585 1942 97 45 4 chr11_random 883630 883924 -2602478 + AluY SINE Alu 1 305 0 13965 171 16 29 chr11_random 883924 885757 -2600645 + L1 LINE L1 3561 5345 -801 2225 96 0 55 chr11_random 885757 886069 -2600333 - AluSx SINE Alu -17 295 1 731 190 13 91 chr11_random 886168 886400 -2600002 - L1ME2 LINE L1 -9 6155 5942 579 283 95 15 chr11_random 886424 886761 -2599641 - L1M4c LINE L1 -4782 1602 1240 1028 212 41 17 chr11_random 886766 887216 -2599186 - MLT1E LTR MaLR -37 556 1 642 224 77 29 chr11_random 887243 887413 -2598989 - L2 LINE L2 -1034 2280 2103 205 253 19 45 chr11_random 888371 888525 -2597877 + (GGGTG)n Simple_repeat Simple_repeat 3 152 0 * 275 149 93 43 chr11_random 888410 888571 -2597831 + (CTGGGG)n Simple_repeat Simple_repeat 3 171 0 300 219 0 0 chr11_random 897783 897865 -2588537 + (CCCCG)n Simple_repeat Simple_repeat 1 82 0 184 184 0 26 chr11_random 898635 898711 -2587691 + G-rich Low_complexity Low_complexity 1 74 0 541 253 124 62 chr11_random 899452 899871 -2586531 - MLT1C LTR MaLR -15 452 8 2240 107 3 0 chr11_random 901511 901819 -2584583 + AluSq SINE Alu 1 309 -4 182 319 190 0 chr11_random 902152 902268 -2584134 - L2 LINE L2 0 3313 3176 328 373 0 0 chr11_random 902498 902608 -2583794 + (TGGG)n Simple_repeat Simple_repeat 1 110 0 253 307 7 15 chr11_random 907192 907329 -2579073 + (CCA)n Simple_repeat Simple_repeat 3 138 0 231 307 7 15 chr11_random 908863 909000 -2577402 + (CCA)n Simple_repeat Simple_repeat 3 138 0 471 299 147 0 chr11_random 909346 909550 -2576852 - L2 LINE L2 -1217 2097 1864 2317 171 69 19 chr11_random 909552 910074 -2576328 - MER41C LTR ERV1 0 554 7 23 33 0 0 chr11_random 910688 910718 -2575684 + GC_rich Low_complexity Low_complexity 1 30 0 260 294 35 12 chr11_random 911658 911743 -2574659 + MIR3 SINE MIR 107 193 -15 2192 152 89 8 chr11_random 911853 912247 -2574155 - MSTA LTR MaLR -2 426 1 200 293 0 12 chr11_random 913466 913548 -2572854 + G-rich Low_complexity Low_complexity 3 83 0 352 321 49 40 chr11_random 914709 914933 -2571469 - L1MC5 LINE L1 -741 7220 6995 288 345 28 0 chr11_random 915285 915427 -2570975 - L1MCa LINE L1 -3791 2635 2490 307 298 53 53 chr11_random 915453 915641 -2570761 - L1MCa LINE L1 -3964 2462 2275 2265 102 0 0 chr11_random 916323 916627 -2569775 - AluSx SINE Alu -8 304 1 379 280 77 10 chr11_random 918744 918951 -2567451 + MER106B DNA MER1_type 7 227 -832 596 285 131 15 chr11_random 918990 919540 -2566862 + MER106B DNA MER1_type 352 1059 0 560 301 97 11 chr11_random 921181 921543 -2564859 - L1MD3 LINE L1 0 7995 7603 340 178 0 97 chr11_random 923329 923514 -2562888 + (CACCC)n Simple_repeat Simple_repeat 3 169 0 261 191 0 96 chr11_random 923525 923682 -2562720 + (CACCC)n Simple_repeat Simple_repeat 3 144 0 219 216 20 0 chr11_random 924369 924420 -2561982 - MIR SINE MIR -60 148 97 207 392 110 18 chr11_random 926601 927101 -2559301 + L2 LINE L2 2035 2580 -734 419 330 68 56 chr11_random 927771 928126 -2558276 + HAL1b LINE L1 335 693 -655 227 274 0 12 chr11_random 928913 928997 -2557405 - L1 LINE L1 -1082 5064 4982 231 200 40 0 chr11_random 931092 931142 -2555260 + (CCCTAG)n Simple_repeat Simple_repeat 6 57 0 348 253 66 0 chr11_random 932220 932386 -2554016 + (CAGGG)n Simple_repeat Simple_repeat 4 180 0 427 160 67 0 chr11_random 932500 933025 -2553377 + (CGG)n Simple_repeat Simple_repeat 1 560 0 2284 82 0 3 chr11_random 935781 936075 -2550327 + AluY SINE Alu 5 297 -14 520 187 0 37 chr11_random 937455 937584 -2548818 - L1PA8A LINE L1 0 6131 6025 207 0 0 0 chr11_random 937619 937642 -2548760 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1039 33 0 0 chr11_random 937644 937766 -2548636 - L1PA4 LINE L1 -13 6142 6021 958 80 0 22 chr11_random 937783 937921 -2548481 - L1PA4 LINE L1 0 6155 6021 1000 58 0 22 chr11_random 937938 938076 -2548326 - L1PA4 LINE L1 0 6155 6021 805 249 47 8 chr11_random 938081 938338 -2548064 - L1MC4 LINE L1 -994 7048 6782 27 29 0 0 chr11_random 946868 946902 -2539500 + AT_rich Low_complexity Low_complexity 1 34 0 2479 58 0 3 chr11_random 946902 947211 -2539191 - AluY SINE Alu -3 308 1 219 69 0 0 chr11_random 947518 947547 -2538855 + (T)n Simple_repeat Simple_repeat 1 29 0 398 322 141 34 chr11_random 950895 951118 -2535284 + L1M4 LINE L1 4508 4706 -1440 2060 103 17 13 chr11_random 951118 951419 -2534983 + AluSx SINE Alu 11 312 0 2184 102 0 3 chr11_random 951426 951721 -2534681 + AluSg SINE Alu 1 294 -16 398 322 141 34 chr11_random 951721 952086 -2534316 + L1M4 LINE L1 4711 5168 -978 2229 110 3 0 chr11_random 952146 952454 -2533948 + AluSx SINE Alu 1 309 -3 620 288 56 28 chr11_random 952521 952806 -2533596 - HAL1 LINE L1 -799 1708 1416 2488 79 0 0 chr11_random 953117 953459 -2532943 + THE1A LTR MaLR 14 355 0 11729 100 4 19 chr11_random 953460 953896 -2532506 + THE1A-int LTR MaLR 3 444 -1136 2095 102 18 0 chr11_random 953896 954180 -2532222 + AluSx SINE Alu 1 289 -23 11729 100 4 19 chr11_random 954180 955346 -2531056 + THE1A-int LTR MaLR 444 1580 0 2638 69 29 6 chr11_random 955346 955693 -2530709 + THE1A LTR MaLR 1 355 0 1695 137 21 27 chr11_random 955693 956022 -2530380 + THE1C LTR MaLR 49 375 0 2483 71 0 0 chr11_random 956267 956577 -2529825 - AluY SINE Alu -1 310 1 417 316 99 0 chr11_random 956616 956787 -2529615 + MIR SINE MIR 4 191 -71 229 128 0 139 chr11_random 957606 957692 -2528710 + (CGGGA)n Simple_repeat Simple_repeat 2 75 0 217 204 51 51 chr11_random 963827 963925 -2522477 + G-rich Low_complexity Low_complexity 4 101 0 206 255 20 0 chr11_random 965190 965241 -2521161 + MIR SINE MIR 90 141 -67 848 237 117 41 chr11_random 965251 965669 -2520733 + MLT1C LTR MaLR 6 455 -12 231 253 0 0 chr11_random 966030 966125 -2520277 + (CACCC)n Simple_repeat Simple_repeat 5 99 0 218 318 7 13 chr11_random 968126 968280 -2518122 + (TGG)n Simple_repeat Simple_repeat 1 153 0 207 328 0 0 chr11_random 968335 968454 -2517948 + (TGG)n Simple_repeat Simple_repeat 3 121 0 217 314 7 15 chr11_random 970342 970479 -2515923 + (TGG)n Simple_repeat Simple_repeat 3 138 0 242 307 7 15 chr11_random 972013 972150 -2514252 + (TGG)n Simple_repeat Simple_repeat 3 138 0 22 0 0 0 chr11_random 1175476 1175498 -2310904 + AT_rich Low_complexity Low_complexity 1 22 0 243 278 32 71 chr11_random 1176230 1176310 -2310092 + MIR SINE MIR 80 155 -107 2259 95 0 0 chr11_random 1176310 1176606 -2309796 + AluSx SINE Alu 1 296 -16 243 278 32 71 chr11_random 1176606 1176651 -2309751 + MIR SINE MIR 155 200 -62 363 277 69 0 chr11_random 1176690 1176820 -2309582 + MER113 DNA MER1_type? 56 194 -327 904 77 32 13 chr11_random 1177035 1177191 -2309211 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 1696 129 3 28 chr11_random 1177192 1177479 -2308923 - AluSx SINE Alu -32 280 1 747 306 97 42 chr11_random 1177914 1178348 -2308054 + L2 LINE L2 2856 3313 0 355 175 0 56 chr11_random 1179296 1179422 -2306980 + (TTA)n Simple_repeat Simple_repeat 2 120 0 413 161 20 4 chr11_random 1179573 1179665 -2306737 + L1MA7 LINE L1 6166 6252 -39 1457 236 107 11 chr11_random 1179901 1180359 -2306043 + L1ME1 LINE L1 5662 6163 -3 266 335 63 6 chr11_random 1180439 1180597 -2305805 - MLT1K LTR MaLR -17 571 405 328 197 0 0 chr11_random 1180682 1180743 -2305659 - MLT1K LTR MaLR -327 261 201 2001 186 37 75 chr11_random 1180750 1181320 -2305082 + L1MC2 LINE L1 5797 6344 0 253 284 0 0 chr11_random 1181376 1181443 -2304959 + (TG)n Simple_repeat Simple_repeat 1 67 0 2251 101 0 0 chr11_random 1181602 1181898 -2304504 - AluSx SINE Alu -16 296 1 1703 171 19 118 chr11_random 1182944 1183377 -2303025 + MLT1B LTR MaLR 1 390 0 513 257 171 0 chr11_random 1183501 1183641 -2302761 + MIR SINE MIR 33 196 -66 193 372 117 0 chr11_random 1183660 1183797 -2302605 - MIR SINE MIR -33 229 77 180 125 0 0 chr11_random 1184132 1184164 -2302238 + (CTCA)n Simple_repeat Simple_repeat 2 33 0 983 226 26 4 chr11_random 1184236 1184501 -2301901 + MLT1E1 LTR MaLR 2 272 -382 898 239 44 0 chr11_random 1184550 1184776 -2301626 + MLT1E1 LTR MaLR 418 653 -1 190 375 0 0 chr11_random 1185714 1185794 -2300608 - MIR SINE MIR -63 145 66 880 300 58 9 chr11_random 1185826 1186156 -2300246 - L1ME LINE L1 -394 5841 5496 460 241 26 36 chr11_random 1186163 1186358 -2300044 - L1ME LINE L1 -5142 1254 1062 224 342 119 30 chr11_random 1186394 1186689 -2299713 + L2 LINE L2 2593 2913 -401 421 328 0 11 chr11_random 1186739 1186916 -2299486 + (CA)n Simple_repeat Simple_repeat 2 176 0 223 250 29 29 chr11_random 1186894 1186962 -2299440 + (CATG)n Simple_repeat Simple_repeat 1 68 0 * 185 218 0 141 chr11_random 1187021 1187099 -2299303 + L2 LINE L2 3152 3218 -95 264 30 0 0 chr11_random 1187123 1187156 -2299246 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 219 325 167 9 chr11_random 1187349 1187463 -2298939 + L2 LINE L2 3138 3269 -3 914 283 66 17 chr11_random 1188528 1188935 -2297467 - L2 LINE L2 -748 2566 2140 181 374 47 0 chr11_random 1188958 1189065 -2297337 + L2 LINE L2 3200 3311 -2 286 262 65 10 chr11_random 1189358 1189478 -2296924 - MIR SINE MIR -66 142 16 212 368 111 11 chr11_random 1191423 1191613 -2294789 - L2 LINE L2 -2 3311 3103 1008 193 31 103 chr11_random 1191617 1191938 -2294464 + MLT1B LTR MaLR 4 301 -89 238 239 28 28 chr11_random 1192047 1192118 -2294284 - MIR SINE MIR -111 151 81 663 116 0 0 chr11_random 1192616 1192728 -2293674 + (GA)n Simple_repeat Simple_repeat 1 112 0 299 325 87 0 chr11_random 1193389 1193515 -2292887 - MIR SINE MIR -70 192 56 429 176 37 81 chr11_random 1194686 1194822 -2291580 + MLT1C LTR MaLR 65 194 -273 789 244 19 48 chr11_random 1194958 1195228 -2291174 + MLT1C LTR MaLR 191 452 -15 2208 109 3 3 chr11_random 1195611 1195923 -2290479 + AluSq SINE Alu 1 312 -1 230 239 56 14 chr11_random 1196150 1196221 -2290181 - MLT1J LTR MaLR -337 174 101 682 241 10 55 chr11_random 1196280 1196479 -2289923 + Charlie1 DNA MER1_type 51 240 -2521 662 186 7 0 chr11_random 1196463 1196603 -2289799 + Charlie1 DNA MER1_type 2621 2761 0 * 2139 106 0 0 chr11_random 1196659 1196943 -2289459 + AluSx SINE Alu 1 284 -28 1928 91 4 0 chr11_random 1196943 1197195 -2289207 + AluSp SINE Alu 51 303 -10 342 298 77 10 chr11_random 1197460 1197564 -2288838 + MIR SINE MIR 36 146 -62 234 226 0 19 chr11_random 1199488 1199541 -2286861 + MLT1I LTR MaLR 358 409 0 284 0 28 0 chr11_random 1200410 1200446 -2285956 + (TG)n Simple_repeat Simple_repeat 2 38 0 490 103 0 0 chr11_random 1200895 1200963 -2285439 - AluJ/FLAM SINE Alu -244 68 1 563 198 48 0 chr11_random 1200968 1201094 -2285308 - MER58B DNA MER1_type -35 306 175 640 280 117 10 chr11_random 1201131 1201431 -2284971 - MLT1I LTR MaLR -60 349 18 299 315 63 14 chr11_random 1201452 1201595 -2284807 + MIR3 SINE MIR 38 187 -21 2159 108 7 0 chr11_random 1201753 1202050 -2284352 - AluSx SINE Alu -13 299 1 801 297 88 32 chr11_random 1202330 1202738 -2283664 + L2 LINE L2 2883 3313 0 737 121 52 35 chr11_random 1202976 1203092 -2283310 + FLAM_C SINE Alu 1 118 -15 869 140 0 11 chr11_random 1206123 1206302 -2280100 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 671 176 0 12 chr11_random 1206317 1206482 -2279920 + (TGGA)n Simple_repeat Simple_repeat 4 166 0 233 218 13 0 chr11_random 1206512 1206590 -2279812 + GA-rich Low_complexity Low_complexity 1 79 0 228 309 278 16 chr11_random 1206962 1207156 -2279246 - MIR SINE MIR 0 262 18 814 246 105 72 chr11_random 1207369 1207760 -2278642 + MLT1J LTR MaLR 1 404 -107 1408 193 6 8 chr11_random 1208320 1208358 -2278044 - MLT2D LTR ERVL -2 412 375 354 98 0 0 chr11_random 1208358 1208409 -2277993 + (TG)n Simple_repeat Simple_repeat 1 51 0 1408 193 6 8 chr11_random 1208409 1208723 -2277679 - MLT2D LTR ERVL -39 375 1 182 341 0 49 chr11_random 1208772 1208854 -2277548 - L3 LINE CR1 -5 1572 1495 335 193 12 0 chr11_random 1208944 1209027 -2277375 + (CA)n Simple_repeat Simple_repeat 2 85 0 268 232 20 49 chr11_random 1209706 1209839 -2276563 + MIR SINE MIR 38 163 -62 2238 96 7 0 chr11_random 1210017 1210310 -2276092 - AluSx SINE Alu -17 295 1 562 252 159 0 chr11_random 1210710 1210861 -2275541 + MER5A DNA MER1_type 10 184 -5 181 267 107 13 chr11_random 1210868 1210943 -2275459 + MIR3 SINE MIR 106 187 -21 1101 251 99 36 chr11_random 1211492 1212002 -2274400 + MLT1G1 LTR MaLR 3 545 -45 1646 192 132 11 chr11_random 1212002 1212436 -2273966 + MLT1D LTR MaLR 1 585 -8 1464 257 51 29 chr11_random 1212438 1213464 -2272938 - L1ME LINE L1 -2646 3434 2215 2198 123 0 0 chr11_random 1213464 1213765 -2272637 - AluSx SINE Alu -11 301 1 1464 257 51 29 chr11_random 1213765 1213941 -2272461 - L1ME LINE L1 -3865 2215 2044 1325 301 47 52 chr11_random 1213978 1214917 -2271485 - L1ME LINE L1 -5127 943 10 262 320 49 0 chr11_random 1214924 1215046 -2271356 + MLT1G1-int LTR MaLR 451 578 -793 318 249 5 137 chr11_random 1215570 1215775 -2270627 + MLT1G1-int LTR MaLR 961 1138 -233 1196 164 88 73 chr11_random 1215963 1216460 -2269942 + MLT1G1 LTR MaLR 9 590 0 275 333 29 10 chr11_random 1216936 1217038 -2269364 + MER5A DNA MER1_type 6 109 -80 385 311 47 11 chr11_random 1217264 1217454 -2268948 + MER117 DNA MER1_type 1 197 0 292 272 39 0 chr11_random 1218004 1218091 -2268311 - MIR SINE MIR -68 140 58 422 312 86 11 chr11_random 1219074 1219259 -2267143 - MIR SINE MIR -40 222 21 805 200 35 6 chr11_random 1220482 1220652 -2265750 - MER5B DNA MER1_type -3 175 1 23 33 0 0 chr11_random 1221234 1221264 -2265138 + AT_rich Low_complexity Low_complexity 1 30 0 633 329 52 17 chr11_random 1221671 1222018 -2264384 - MLT1I LTR MaLR -11 398 40 192 304 87 0 chr11_random 1223182 1223251 -2263151 - L2 LINE L2 -2 3270 3196 198 103 0 0 chr11_random 1223256 1223285 -2263117 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 421 284 46 0 chr11_random 1223291 1223400 -2263002 - L2 LINE L2 -20 3293 3180 640 304 39 10 chr11_random 1223472 1223676 -2262726 - MIR SINE MIR -21 241 32 201 268 18 0 chr11_random 1224006 1224062 -2262340 - MER5A DNA MER1_type -56 133 77 213 305 50 35 chr11_random 1224143 1224284 -2262118 - L2 LINE L2 -203 3069 2927 1734 183 3 3 chr11_random 1224582 1224872 -2261530 - AluJb SINE Alu -22 290 1 243 351 14 0 chr11_random 1224872 1224946 -2261456 - MIR SINE MIR -71 191 117 399 258 127 60 chr11_random 1225050 1225302 -2261100 + MER46C DNA MER2_type 12 280 -58 237 33 0 0 chr11_random 1226784 1226814 -2259588 + (CCCCAG)n Simple_repeat Simple_repeat 4 33 0 202 62 62 0 chr11_random 1226935 1226967 -2259435 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 240 203 31 0 chr11_random 1227164 1227228 -2259174 - MER45 DNA AcHobo -946 94 29 351 232 0 0 chr11_random 1227546 1227615 -2258787 - MIR3 SINE MIR -28 180 112 1115 266 102 21 chr11_random 1228171 1228641 -2257761 + MLT1H LTR MaLR 37 544 -5 183 339 0 0 chr11_random 1228914 1228976 -2257426 - L2 LINE L2 -96 3176 3115 222 306 14 0 chr11_random 1229239 1229311 -2257091 + (AATTG)n Simple_repeat Simple_repeat 3 75 0 1379 220 101 20 chr11_random 1230411 1230756 -2255646 - MLT1A2 LTR MaLR 0 374 2 313 208 128 48 chr11_random 1232682 1232807 -2253595 - MER45A DNA AcHobo -6 172 38 1636 111 35 108 chr11_random 1233409 1233725 -2252677 + AluSx SINE Alu 1 293 -19 2278 109 0 0 chr11_random 1233821 1234133 -2252269 + AluSx SINE Alu 1 312 0 190 366 35 17 chr11_random 1234565 1234737 -2251665 + L2 LINE L2 2922 3096 -176 1017 150 0 0 chr11_random 1236691 1236871 -2249531 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 2537 115 22 0 chr11_random 1236886 1237242 -2249160 - THE1B LTR MaLR 0 364 1 959 139 4 0 chr11_random 1237246 1237511 -2248891 + (TGGA)n Simple_repeat Simple_repeat 1 266 0 1688 215 32 5 chr11_random 1237542 1237919 -2248483 - MLT1B LTR MaLR -3 387 1 797 256 29 25 chr11_random 1238125 1238367 -2248035 + MIR SINE MIR 15 257 -5 191 359 51 0 chr11_random 1238844 1238922 -2247480 + MIR3 SINE MIR 77 158 -50 211 334 133 19 chr11_random 1239975 1240154 -2246248 - MIR SINE MIR -50 212 11 204 245 0 19 chr11_random 1242057 1242110 -2244292 + GA-rich Low_complexity Low_complexity 3 54 0 193 188 21 21 chr11_random 1242249 1242297 -2244105 + MIR SINE MIR 103 150 -112 265 182 182 34 chr11_random 1242758 1242846 -2243556 - MIR SINE MIR -20 188 87 245 321 158 12 chr11_random 1245862 1246102 -2240300 - L2 LINE L2 -17 3255 2981 187 358 133 12 chr11_random 1246544 1246717 -2239685 - L2 LINE L2 -13 3300 3107 558 270 273 0 chr11_random 1246755 1247099 -2239303 - L2 LINE L2 -339 2975 2538 1625 224 57 2 chr11_random 1247133 1247606 -2238796 + MLT1D LTR MaLR 1 499 -6 3254 188 38 5 chr11_random 1248185 1248814 -2237588 - L1MC2 LINE L1 0 6344 5695 225 94 0 0 chr11_random 1250304 1250336 -2236066 + (CA)n Simple_repeat Simple_repeat 1 32 0 442 206 172 39 chr11_random 1251020 1251200 -2235202 - MLT1K LTR MaLR -17 571 368 517 182 58 0 chr11_random 1251416 1251537 -2234865 + MER20 DNA MER1_type 57 184 -35 282 302 22 44 chr11_random 1252821 1253003 -2233399 + G-rich Low_complexity Low_complexity 3 180 0 239 331 11 43 chr11_random 1253061 1253245 -2233157 + G-rich Low_complexity Low_complexity 3 180 0 1446 276 86 6 chr11_random 1253496 1253963 -2232439 + L1MC3 LINE L1 7269 7772 -13 214 308 260 0 chr11_random 1254615 1254719 -2231683 - MIR SINE MIR -117 145 15 278 250 38 0 chr11_random 1255513 1255593 -2230809 + GA-rich Low_complexity Low_complexity 1 83 0 230 217 14 0 chr11_random 1255641 1255710 -2230692 + GA-rich Low_complexity Low_complexity 1 70 0 274 274 21 0 chr11_random 1255716 1255811 -2230591 + (TGGA)n Simple_repeat Simple_repeat 4 100 0 209 253 0 20 chr11_random 1255812 1255911 -2230491 + GA-rich Low_complexity Low_complexity 3 99 0 843 176 33 22 chr11_random 1257160 1257342 -2229060 + MER2 DNA MER2_type 1 184 -161 359 136 0 15 chr11_random 1257341 1257407 -2228995 - Tigger2a DNA MER2_type -333 101 37 * 288 280 0 0 chr11_random 1257552 1257627 -2228775 + MER2 DNA MER2_type 269 343 -2 2212 155 43 55 chr11_random 1257974 1258413 -2227989 + Tigger2a DNA MER2_type 1 434 0 353 214 14 14 chr11_random 1258493 1258563 -2227839 + HAL1b LINE L1 1272 1341 -7 540 245 130 50 chr11_random 1258729 1258929 -2227473 - MER20 DNA MER1_type -3 216 1 2448 136 86 10 chr11_random 1259530 1259927 -2226475 - MSTA LTR MaLR 0 428 2 3559 176 71 17 chr11_random 1260287 1261236 -2225166 - L1MB7 LINE L1 0 6184 5170 1980 137 0 0 chr11_random 1261236 1261528 -2224874 - AluSx SINE Alu -10 302 11 3559 176 71 17 chr11_random 1261528 1261575 -2224827 - L1MB7 LINE L1 -1014 5170 5127 924 188 64 81 chr11_random 1261636 1261993 -2224409 - L1MB7 LINE L1 -984 5162 4812 * 1190 226 45 52 chr11_random 1261972 1262446 -2223956 - L1MB7 LINE L1 0 6162 5686 189 0 0 0 chr11_random 1262446 1262467 -2223935 + (TG)n Simple_repeat Simple_repeat 2 22 0 1190 226 45 52 chr11_random 1262467 1262539 -2223863 - L1MB7 LINE L1 -476 5686 3933 358 194 18 115 chr11_random 1262603 1262768 -2223634 - MER53 DNA DNA -17 172 24 882 292 103 0 chr11_random 1262778 1263117 -2223285 - L1ME2 LINE L1 -206 5958 5585 192 40 0 0 chr11_random 1263169 1263194 -2223208 + (CA)n Simple_repeat Simple_repeat 2 26 0 826 182 0 0 chr11_random 1263194 1263342 -2223060 + L1MA9 LINE L1 6165 6312 0 255 181 23 192 chr11_random 1263632 1263809 -2222593 - MER53 DNA DNA -38 151 5 186 306 24 59 chr11_random 1264401 1264486 -2221916 - L2 LINE L2 0 3272 3191 191 300 0 0 chr11_random 1264896 1264946 -2221456 - MIR SINE MIR -55 153 104 268 273 7 14 chr11_random 1267946 1268085 -2218317 + CT-rich Low_complexity Low_complexity 1 138 0 234 242 0 45 chr11_random 1268168 1268234 -2218168 - L3 LINE CR1 -109 1468 1406 2263 116 0 0 chr11_random 1268712 1269015 -2217387 + AluSx SINE Alu 1 303 -9 25 0 0 0 chr11_random 1269056 1269081 -2217321 + AT_rich Low_complexity Low_complexity 1 25 0 396 321 19 26 chr11_random 1269249 1269403 -2216999 - MIR SINE MIR -60 148 36 1076 111 74 16 chr11_random 1269516 1269705 -2216697 + MSTA LTR MaLR 5 204 -224 1346 161 8 35 chr11_random 1270040 1270292 -2216110 + MSTC LTR MaLR 1 245 -183 2250 161 51 0 chr11_random 1270292 1270698 -2215704 - MSTB LTR MaLR 0 402 1 1115 161 5 16 chr11_random 1270698 1270888 -2215514 + MSTC LTR MaLR 241 428 0 362 227 47 0 chr11_random 1271159 1271261 -2215141 + L1MB8 LINE L1 5837 5950 -228 218 398 75 22 chr11_random 1271616 1271813 -2214589 + L2 LINE L2 2986 3198 -74 270 0 0 0 chr11_random 1271813 1271843 -2214559 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 218 398 75 22 chr11_random 1271843 1271871 -2214531 + L2 LINE L2 3198 3223 -49 446 259 61 0 chr11_random 1272063 1272210 -2214192 - HAL1 LINE L1 -949 1558 1403 1119 202 30 43 chr11_random 1272237 1272539 -2213863 + L1MA9 LINE L1 5982 6279 -33 353 321 79 54 chr11_random 1272618 1272678 -2213724 - L1MEd LINE L1 -1159 1348 1291 2314 109 94 10 chr11_random 1272678 1273073 -2213329 + MSTA LTR MaLR 1 428 0 353 321 79 54 chr11_random 1273073 1273462 -2212940 - L1MEd LINE L1 -1216 1291 882 1897 147 0 63 chr11_random 1274202 1274589 -2211813 + AluJb SINE Alu 1 366 0 2101 156 57 13 chr11_random 1274589 1274973 -2211429 - MSTA LTR MaLR -27 401 1 6215 179 43 7 chr11_random 1275062 1276443 -2209959 - MSTA-int LTR MaLR -26 1625 3 1486 156 141 87 chr11_random 1276448 1276515 -2209887 - MSTA LTR MaLR -3 425 363 2612 74 0 0 chr11_random 1276515 1276826 -2209576 - AluY SINE Alu 0 311 1 1486 156 141 87 chr11_random 1276826 1277161 -2209241 - MSTA LTR MaLR -65 363 1 242 226 0 32 chr11_random 1277823 1277885 -2208517 + MLT1L LTR MaLR 142 201 -414 320 292 17 18 chr11_random 1278432 1278563 -2207839 - MIR SINE MIR -78 130 1 204 255 0 0 chr11_random 1278898 1278945 -2207457 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 223 295 110 37 chr11_random 1279963 1280378 -2206024 + L2 LINE L2 2856 3272 0 1550 197 42 0 chr11_random 1280872 1281156 -2205246 + AluJo SINE Alu 1 296 -16 2182 104 0 7 chr11_random 1281297 1281585 -2204817 - AluSc SINE Alu -10 299 14 218 302 0 57 chr11_random 1281776 1281791 -2204611 + (TATATG)n Simple_repeat Simple_repeat 3 17 -85 1720 138 86 0 chr11_random 1281791 1282059 -2204343 + AluSg SINE Alu 1 291 -19 218 302 0 57 chr11_random 1282059 1282149 -2204253 + (TATATG)n Simple_repeat Simple_repeat 17 102 0 * 234 329 0 12 chr11_random 1282099 1282184 -2204218 + (CA)n Simple_repeat Simple_repeat 2 85 0 320 198 115 0 chr11_random 1282190 1282286 -2204116 + L1ME4a LINE L1 5974 6080 -41 1293 170 0 5 chr11_random 1282314 1282514 -2203888 + AluJo SINE Alu 87 285 -27 2180 116 0 0 chr11_random 1282954 1283231 -2203171 + AluSx SINE Alu 1 277 -35 429 20 0 0 chr11_random 1283232 1283282 -2203120 + (TC)n Simple_repeat Simple_repeat 1 50 0 180 0 0 0 chr11_random 1283283 1283303 -2203099 + (TA)n Simple_repeat Simple_repeat 2 21 0 261 279 58 0 chr11_random 1283448 1283534 -2202868 - L2 LINE L2 -38 3275 3185 740 299 84 13 chr11_random 1283680 1283988 -2202414 + MLT1J2 LTR MaLR 118 447 -3 249 290 110 56 chr11_random 1283992 1284417 -2201985 - L2 LINE L2 -203 3110 2657 305 267 114 15 chr11_random 1284954 1285085 -2201317 - L2 LINE L2 -1534 1780 1637 547 272 185 0 chr11_random 1285483 1285748 -2200654 - L2 LINE L2 -2562 752 439 272 283 211 12 chr11_random 1286033 1286199 -2200203 + LTR16C LTR ERVL 290 488 -3 3148 159 44 32 chr11_random 1286580 1287092 -2199310 + L1MC2 LINE L1 5588 6111 -233 2178 121 23 3 chr11_random 1287092 1287398 -2199004 + AluSx SINE Alu 1 312 0 3148 159 44 32 chr11_random 1287398 1287545 -2198857 + L1MC2 LINE L1 6111 6255 -89 386 73 18 0 chr11_random 1287545 1287600 -2198802 + MSTA LTR MaLR 1 56 -372 1988 138 0 13 chr11_random 1287602 1287900 -2198502 - AluJb SINE Alu -18 294 1 523 111 0 0 chr11_random 1287927 1288008 -2198394 + L1MC2 LINE L1 6253 6333 -11 1041 214 21 54 chr11_random 1288918 1289048 -2197354 + L1MB3 LINE L1 5831 5964 -219 2189 107 3 7 chr11_random 1289048 1289361 -2197041 + AluSp SINE Alu 1 313 0 1041 214 21 54 chr11_random 1289361 1289510 -2196892 + L1MB3 LINE L1 5964 6101 -82 856 151 0 0 chr11_random 1289725 1289851 -2196551 + FLAM_C SINE Alu 1 126 -17 1668 136 17 38 chr11_random 1289914 1290201 -2196201 - AluJo SINE Alu -30 282 2 935 220 33 67 chr11_random 1290679 1290979 -2195423 + MLT1A2 LTR MaLR 5 294 -80 254 296 62 45 chr11_random 1291264 1291443 -2194959 + L1ME4a LINE L1 5939 6120 -1 378 129 0 0 chr11_random 1293129 1293191 -2193211 + (GGGA)n Simple_repeat Simple_repeat 4 65 0 396 56 0 42 chr11_random 1293802 1293873 -2192529 + (GGGAA)n Simple_repeat Simple_repeat 5 72 0 1006 211 64 75 chr11_random 1297695 1297807 -2188595 - MLT1C LTR MaLR -17 450 338 1516 177 73 44 chr11_random 1297807 1298220 -2188182 + MSTC LTR MaLR 4 428 0 1006 211 64 75 chr11_random 1298220 1298482 -2187920 - MLT1C LTR MaLR -129 338 80 278 322 126 44 chr11_random 1298573 1298915 -2187487 - L2 LINE L2 -92 3221 2852 2494 69 0 13 chr11_random 1299337 1299640 -2186762 + AluY SINE Alu 1 299 -12 1072 241 118 24 chr11_random 1299988 1300412 -2185990 + MLT1C LTR MaLR 4 467 0 231 273 0 0 chr11_random 1300548 1300603 -2185799 + MER5A DNA MER1_type 9 63 -126 717 211 48 0 chr11_random 1300960 1301126 -2185276 + L1MB5 LINE L1 5988 6161 -13 388 218 58 0 chr11_random 1301583 1301670 -2184732 + MIR SINE MIR 90 181 -81 341 265 96 58 chr11_random 1301681 1301994 -2184408 + L1MEd LINE L1 630 954 -5165 4702 219 65 90 chr11_random 1302004 1302096 -2184306 + L1MEd LINE L1 2310 2403 -3726 2250 106 3 3 chr11_random 1302096 1302399 -2184003 + AluSg SINE Alu 1 303 -7 4702 219 65 90 chr11_random 1302399 1302644 -2183758 + L1MEd LINE L1 2403 2653 -3476 812 176 95 0 chr11_random 1302644 1302792 -2183610 + FRAM SINE Alu 1 161 -15 4702 219 65 90 chr11_random 1302792 1304384 -2182018 + L1MEd LINE L1 2653 4336 -1793 2204 125 14 0 chr11_random 1304393 1304688 -2181714 - AluSg SINE Alu -11 299 1 2085 128 0 0 chr11_random 1304692 1304988 -2181414 - AluSx SINE Alu 0 308 13 515 276 96 94 chr11_random 1305178 1305851 -2180551 + L1ME4a LINE L1 3839 4515 -1631 2258 108 7 0 chr11_random 1305851 1306139 -2180263 - AluSc SINE Alu -17 292 3 515 276 96 94 chr11_random 1306139 1306229 -2180173 + L1ME4a LINE L1 4515 4603 -1543 332 296 118 15 chr11_random 1306512 1306647 -2179755 + L1ME4a LINE L1 5736 5884 -237 288 244 219 8 chr11_random 1307568 1307691 -2178711 + L2 LINE L2 3165 3313 0 2522 68 0 3 chr11_random 1308883 1309194 -2177208 + AluY SINE Alu 1 310 -1 1377 210 64 17 chr11_random 1309548 1309905 -2176497 - THE1C LTR MaLR -1 374 1 425 277 18 0 chr11_random 1309905 1310017 -2176385 + L1MD3 LINE L1 7826 7939 -56 1380 188 3 36 chr11_random 1310035 1310339 -2176063 + AluSx SINE Alu 1 294 -18 636 157 58 16 chr11_random 1310447 1310568 -2175834 - THE1C LTR MaLR -249 126 1 635 180 75 25 chr11_random 1310568 1310698 -2175704 + L1MD3 LINE L1 7826 7967 -28 2179 106 3 23 chr11_random 1310698 1310999 -2175403 + AluSx SINE Alu 1 295 -17 635 180 75 25 chr11_random 1310999 1311029 -2175373 + L1MD3 LINE L1 7967 7994 -1 473 340 125 67 chr11_random 1311085 1311280 -2175122 + L1 LINE L1 3793 3975 -2171 1889 165 0 10 chr11_random 1311280 1311583 -2174819 - AluJb SINE Alu -12 300 1 473 340 125 67 chr11_random 1311583 1311611 -2174791 + L1 LINE L1 3975 4000 -2146 867 223 0 11 chr11_random 1311611 1311786 -2174616 + FAM SINE Alu 2 174 -1 473 340 125 67 chr11_random 1311786 1312281 -2174121 + L1 LINE L1 4000 4554 -1592 251 241 0 0 chr11_random 1312294 1312352 -2174050 - MER63 DNA MER1_type -24 1037 980 1408 97 6 0 chr11_random 1312386 1312562 -2173840 + AluSc SINE Alu 7 183 -126 510 191 6 0 chr11_random 1312691 1312819 -2173583 + L1ME4a LINE L1 5267 5400 -756 2518 73 3 0 chr11_random 1313451 1313753 -2172649 - AluSx SINE Alu -9 303 1 269 297 83 88 chr11_random 1313947 1314139 -2172263 - MIR3 SINE MIR -3 205 15 603 184 45 76 chr11_random 1314140 1314312 -2172090 - MER45A DNA AcHobo -10 168 2 316 306 50 8 chr11_random 1314343 1314464 -2171938 + MIR SINE MIR 58 183 -79 2139 128 20 0 chr11_random 1314495 1314800 -2171602 + AluSx SINE Alu 1 311 -1 1916 162 77 13 chr11_random 1314918 1315294 -2171108 - MSTB LTR MaLR -8 418 19 2195 125 0 0 chr11_random 1315649 1315952 -2170450 - AluSx SINE Alu -5 307 5 602 294 6 6 chr11_random 1316063 1316240 -2170162 + MIR SINE MIR 86 262 0 599 239 72 0 chr11_random 1317563 1317730 -2168672 - L1MB7 LINE L1 -110 6074 5896 10616 129 23 31 chr11_random 1317730 1317741 -2168661 - Tigger1 DNA MER2_type -153 2265 2255 2117 138 3 0 chr11_random 1317741 1318045 -2168357 - AluSx SINE Alu -7 305 1 10616 129 23 31 chr11_random 1318045 1319532 -2166870 - Tigger1 DNA MER2_type -163 2255 781 1707 163 19 44 chr11_random 1319532 1319851 -2166551 + AluJb SINE Alu 1 311 -1 10616 129 23 31 chr11_random 1319851 1320215 -2166187 - Tigger1 DNA MER2_type -1637 781 416 984 178 17 0 chr11_random 1320209 1320389 -2166013 - Tigger1 DNA MER2_type -2235 183 1 * 1175 192 8 4 chr11_random 1320389 1320623 -2165779 - L1MB7 LINE L1 -339 5835 5601 618 299 17 0 chr11_random 1321554 1321728 -2164674 - MIR SINE MIR -5 257 81 194 306 74 28 chr11_random 1322068 1322176 -2164226 + MIR SINE MIR 39 151 -111 1214 259 68 25 chr11_random 1322180 1322620 -2163782 + MLT1C LTR MaLR 3 461 -6 541 284 66 39 chr11_random 1322690 1323001 -2163401 + L1ME4a LINE L1 5538 5839 -282 471 35 0 0 chr11_random 1323001 1323058 -2163344 + (TA)n Simple_repeat Simple_repeat 2 58 0 2092 125 0 33 chr11_random 1323058 1323362 -2163040 - AluSq SINE Alu -19 294 1 541 284 66 39 chr11_random 1323362 1323383 -2163019 + L1ME4a LINE L1 5838 5880 -241 1754 199 27 29 chr11_random 1323386 1323794 -2162608 + L1MC2 LINE L1 5911 6317 -27 5010 160 21 32 chr11_random 1323799 1324467 -2161935 + L1MA7 LINE L1 5274 5929 -362 2128 123 0 26 chr11_random 1324467 1324775 -2161627 + AluSg SINE Alu 1 300 -10 5010 160 21 32 chr11_random 1324775 1325135 -2161267 + L1MA7 LINE L1 5929 6291 0 22 0 0 0 chr11_random 1325167 1325189 -2161213 + AT_rich Low_complexity Low_complexity 1 22 0 2317 104 3 7 chr11_random 1325414 1325713 -2160689 - AluSq SINE Alu -15 298 1 245 326 0 30 chr11_random 1326390 1326525 -2159877 + (TG)n Simple_repeat Simple_repeat 1 131 0 341 311 0 38 chr11_random 1326542 1326725 -2159677 + (TG)n Simple_repeat Simple_repeat 1 176 0 231 315 0 31 chr11_random 1326747 1326874 -2159528 + (TG)n Simple_repeat Simple_repeat 2 124 0 239 158 0 18 chr11_random 1326894 1326951 -2159451 + (TG)n Simple_repeat Simple_repeat 1 56 0 192 40 0 0 chr11_random 1327061 1327086 -2159316 + (TG)n Simple_repeat Simple_repeat 2 26 0 621 262 18 36 chr11_random 1327261 1327482 -2158920 + MER20 DNA MER1_type 1 217 -2 368 324 57 28 chr11_random 1329228 1329389 -2157013 - MER5A DNA MER1_type -19 159 7 1266 282 13 24 chr11_random 1329723 1330177 -2156225 - L1MB8 LINE L1 -6 6172 5724 394 281 117 45 chr11_random 1330459 1330793 -2155609 - LTR16A1 LTR ERVL -99 358 1 181 263 103 61 chr11_random 1331275 1331488 -2154914 - L2 LINE L2 -224 3048 2827 273 75 0 0 chr11_random 1332385 1332425 -2153977 + (CAGCC)n Simple_repeat Simple_repeat 4 43 0 255 192 0 0 chr11_random 1333189 1333262 -2153140 + CT-rich Low_complexity Low_complexity 2 74 0 460 228 3 9 chr11_random 1333279 1333613 -2152789 + CT-rich Low_complexity Low_complexity 1 331 0 2699 186 88 102 chr11_random 1334852 1335078 -2151324 - L1MC4 LINE L1 -11 6333 6105 2170 128 3 6 chr11_random 1335078 1335391 -2151011 - AluSx SINE Alu 0 312 1 2699 186 88 102 chr11_random 1335391 1335455 -2150947 - L1MC4 LINE L1 -239 6105 6042 312 250 0 0 chr11_random 1335455 1335519 -2150883 - MER2 DNA MER2_type 0 345 282 2699 186 88 102 chr11_random 1335519 1335742 -2150660 - L1MC4 LINE L1 -302 6042 5817 2249 110 3 0 chr11_random 1335742 1336034 -2150368 - AluSp SINE Alu -15 298 6 2699 186 88 102 chr11_random 1336034 1336444 -2149958 - L1MC4 LINE L1 -527 5817 5359 1251 110 0 0 chr11_random 1336444 1336607 -2149795 - AluSg/x SINE Alu -18 294 132 321 219 0 0 chr11_random 1336773 1336837 -2149565 + L1MC2 LINE L1 6138 6201 -143 1005 256 32 63 chr11_random 1337017 1337428 -2148974 + MLT1J LTR MaLR 110 507 -4 795 178 0 8 chr11_random 1337584 1337713 -2148689 - FLAM_A SINE Alu -5 128 1 190 245 20 20 chr11_random 1338798 1338847 -2147555 - MIR3 SINE MIR -3 205 157 1493 194 96 18 chr11_random 1338974 1339370 -2147032 + MLT1C LTR MaLR 1 427 -40 * 1742 173 8 75 chr11_random 1339368 1339755 -2146647 - MLT2B3 LTR ERVL -193 361 1 379 328 109 46 chr11_random 1339755 1340454 -2145948 - L1M4 LINE L1 -1714 4432 3690 306 270 355 15 chr11_random 1340800 1341000 -2145402 - L1M4 LINE L1 -3105 3041 2774 894 263 74 3 chr11_random 1341189 1341474 -2144928 - MER46C DNA MER2_type 0 338 34 555 135 87 39 chr11_random 1341649 1341775 -2144627 + FLAM_A SINE Alu 18 142 0 1863 171 0 7 chr11_random 1341843 1342141 -2144261 - AluSx SINE Alu -16 296 1 1793 137 73 28 chr11_random 1342392 1342750 -2143652 - THE1C LTR MaLR 0 375 2 415 200 0 0 chr11_random 1342766 1342846 -2143556 + MER116 DNA Mariner 1 80 0 253 164 27 0 chr11_random 1342964 1343037 -2143365 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 1575 193 33 4 chr11_random 1343431 1343731 -2142671 + AluJo SINE Alu 1 308 0 2257 110 0 3 chr11_random 1344362 1344671 -2141731 + AluSc SINE Alu 1 308 -1 183 240 144 62 chr11_random 1344680 1344826 -2141576 + L2 LINE L2 2702 2859 -455 2024 121 4 7 chr11_random 1344843 1345152 -2141250 - AluSx SINE Alu 0 311 4 311 312 37 0 chr11_random 1345513 1345622 -2140780 + MIR SINE MIR 55 167 -95 236 278 28 42 chr11_random 1346608 1346752 -2139650 + L1MC/D LINE L1 5259 5400 -2408 307 327 50 70 chr11_random 1346866 1347065 -2139337 + L1MC/D LINE L1 5530 5724 -2084 915 311 196 12 chr11_random 1347081 1347771 -2138631 + L1M4 LINE L1 3505 4331 -1815 230 81 27 0 chr11_random 1347771 1347808 -2138594 + (CA)n Simple_repeat Simple_repeat 1 38 0 739 310 129 66 chr11_random 1347839 1348162 -2138240 + L1M4 LINE L1 4400 4701 -1445 3282 56 0 10 chr11_random 1348162 1348574 -2137828 + L1PA5 LINE L1 5747 6154 0 739 310 129 66 chr11_random 1348574 1348991 -2137411 + L1M4 LINE L1 4701 5206 -940 412 181 0 0 chr11_random 1348994 1349066 -2137336 + MLT1B LTR MaLR 114 185 -205 333 98 59 0 chr11_random 1349171 1349222 -2137180 + MLT1K LTR MaLR 133 186 -204 1520 190 24 67 chr11_random 1349335 1349709 -2136693 + MLT1A2 LTR MaLR 1 358 -16 1263 164 21 59 chr11_random 1350004 1350291 -2136111 + MLT1B LTR MaLR 1 276 -114 312 247 200 13 chr11_random 1351242 1351392 -2135010 - MER5B DNA MER1_type 0 178 1 740 241 86 69 chr11_random 1351888 1352307 -2134095 + MLT1K LTR MaLR 143 568 -20 246 238 59 30 chr11_random 1352937 1353038 -2133364 + MIR SINE MIR 33 136 -72 2007 137 29 0 chr11_random 1353118 1353462 -2132940 + MLT1B LTR MaLR 1 354 -36 184 250 74 81 chr11_random 1353479 1353627 -2132775 + L2 LINE L2 2902 3048 -224 485 235 6 0 chr11_random 1353642 1353821 -2132581 + (CA)n Simple_repeat Simple_repeat 1 180 0 543 237 3 0 chr11_random 1353865 1354168 -2132234 + (CA)n Simple_repeat Simple_repeat 1 304 0 1003 185 63 125 chr11_random 1355329 1355712 -2130690 - MLT1B LTR MaLR -10 380 18 22 35 0 0 chr11_random 1355964 1355993 -2130409 + AT_rich Low_complexity Low_complexity 1 29 0 900 223 22 62 chr11_random 1356406 1356680 -2129722 + MLT1A2 LTR MaLR 112 374 0 1646 153 8 8 chr11_random 1356750 1357005 -2129397 + AluJo SINE Alu 1 255 -57 579 127 0 0 chr11_random 1357006 1357085 -2129317 + AluJ/FLAM SINE Alu 10 88 -224 654 284 109 47 chr11_random 1359634 1360039 -2126363 + LTR16A1 LTR ERVL 27 456 -1 1796 220 18 8 chr11_random 1360110 1360492 -2125910 + MLT1B LTR MaLR 5 390 0 240 342 75 0 chr11_random 1362238 1362358 -2124044 + MIR SINE MIR 87 215 -47 2254 102 0 0 chr11_random 1362627 1362931 -2123471 + AluSx SINE Alu 1 304 0 243 0 0 0 chr11_random 1362975 1363002 -2123400 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 324 306 133 46 chr11_random 1363517 1363840 -2122562 + L2 LINE L2 2947 3297 -16 566 383 63 20 chr11_random 1364197 1364688 -2121714 - ERVL LTR ERVL -912 4742 4231 381 70 0 0 chr11_random 1364690 1364747 -2121655 + (TG)n Simple_repeat Simple_repeat 2 58 0 1932 154 7 0 chr11_random 1364747 1365029 -2121373 - AluJb SINE Alu -30 282 1 256 339 88 16 chr11_random 1365056 1365248 -2121154 - ERVL LTR ERVL -3005 2759 2554 440 323 40 36 chr11_random 1365276 1365499 -2120903 + L1MEc LINE L1 79 302 -6094 1338 300 60 44 chr11_random 1365962 1367055 -2119347 + L1MEc LINE L1 666 1813 -4583 1848 312 41 33 chr11_random 1367059 1367791 -2118611 - ERVL LTR ERVL -3205 2559 1819 255 61 0 0 chr11_random 1367791 1367824 -2118578 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 1848 312 41 33 chr11_random 1367824 1367845 -2118557 - ERVL LTR ERVL -3945 1819 1800 384 381 0 0 chr11_random 1368132 1368266 -2118136 - ERVL LTR ERVL -4362 634 501 288 309 36 0 chr11_random 1368590 1368674 -2117728 - ERVL LTR ERVL -4887 109 23 229 321 9 9 chr11_random 1368717 1368826 -2117576 - LTR16C LTR ERVL -24 467 359 997 264 41 118 chr11_random 1370601 1370794 -2115608 - Charlie4a DNA MER1_type -1453 508 302 1950 108 0 0 chr11_random 1370794 1371079 -2115323 + AluSx SINE Alu 25 309 0 2016 120 0 23 chr11_random 1371079 1371387 -2115015 + AluSx SINE Alu 2 302 -10 997 264 41 118 chr11_random 1371387 1371698 -2114704 - Charlie4a DNA MER1_type -1657 304 41 196 305 34 0 chr11_random 1374635 1374694 -2111708 + MIR SINE MIR 195 255 -7 712 313 25 46 chr11_random 1374755 1374872 -2111530 - L2 LINE L2 -85 3228 3110 2215 82 0 0 chr11_random 1374872 1375188 -2111214 + AluSg SINE Alu 1 316 0 712 313 25 46 chr11_random 1375188 1375570 -2110832 - L2 LINE L2 -203 3110 2741 413 261 66 7 chr11_random 1375656 1375883 -2110519 + MLT1I LTR MaLR 117 401 -8 1099 270 111 36 chr11_random 1375888 1376384 -2110018 - L2 LINE L2 -662 2652 2120 2157 93 0 0 chr11_random 1376813 1377115 -2109287 - AluSc SINE Alu 0 302 1 713 219 60 42 chr11_random 1377505 1377558 -2108844 + L1MD3 LINE L1 7777 7828 -167 1997 154 64 14 chr11_random 1377558 1377915 -2108487 - THE1C LTR MaLR 0 375 1 713 219 60 42 chr11_random 1377915 1378045 -2108357 + L1MD3 LINE L1 7828 7967 -28 2048 113 3 23 chr11_random 1378045 1378346 -2108056 + AluSx SINE Alu 1 295 -17 713 219 60 42 chr11_random 1378346 1378376 -2108026 + L1MD3 LINE L1 7967 7995 0 1741 168 0 10 chr11_random 1378630 1378933 -2107469 - AluJb SINE Alu -12 300 1 850 211 0 39 chr11_random 1378961 1379141 -2107261 + FAM SINE Alu 2 174 -1 2078 113 0 7 chr11_random 1379436 1379738 -2106664 - AluSx SINE Alu -12 300 1 25 0 0 0 chr11_random 1379875 1379900 -2106502 + AT_rich Low_complexity Low_complexity 1 25 0 382 277 149 20 chr11_random 1379905 1379971 -2106431 - L1ME4a LINE L1 -4 6117 6061 1977 124 3 10 chr11_random 1379971 1380317 -2106085 + AluSq SINE Alu 3 313 0 382 277 149 20 chr11_random 1380317 1380398 -2106004 - L1ME4a LINE L1 -60 6061 5951 844 154 19 6 chr11_random 1380417 1380579 -2105823 + L1MA9 LINE L1 6043 6206 -106 1796 142 40 13 chr11_random 1380639 1380942 -2105460 + AluJb SINE Alu 1 311 -1 285 211 189 0 chr11_random 1381017 1381107 -2105295 + MER63 DNA MER1_type 2 734 -102 522 0 0 0 chr11_random 1381110 1381168 -2105234 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 363 212 111 0 chr11_random 1381628 1381727 -2104675 + MER103 DNA DNA 55 164 -2 2123 88 3 36 chr11_random 1381810 1382117 -2104285 - AluSc SINE Alu -12 297 1 352 307 159 16 chr11_random 1382241 1382430 -2103972 - L3 LINE CR1 -865 712 497 255 239 28 14 chr11_random 1382934 1383005 -2103397 + (CACCC)n Simple_repeat Simple_repeat 3 74 0 198 0 0 0 chr11_random 1383019 1383041 -2103361 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 249 119 0 0 chr11_random 1383040 1383082 -2103320 + (CA)n Simple_repeat Simple_repeat 1 42 0 1502 110 55 0 chr11_random 1383400 1383618 -2102784 - MER30 DNA MER1_type 0 230 1 2254 107 0 0 chr11_random 1383699 1383999 -2102403 + AluSx SINE Alu 1 300 -12 539 284 129 22 chr11_random 1385262 1385487 -2100915 - MIR SINE MIR 0 262 14 1418 236 100 34 chr11_random 1385613 1386121 -2100281 - MLT1F LTR MaLR 0 542 1 505 319 81 12 chr11_random 1386390 1386710 -2099692 + L2 LINE L2 1436 1777 -1537 927 241 40 20 chr11_random 1387284 1387533 -2098869 - MLT1J LTR MaLR -256 255 2 352 258 82 82 chr11_random 1388228 1388315 -2098087 - L1ME4a LINE L1 0 6121 6035 2155 73 3 93 chr11_random 1388315 1388658 -2097744 + AluSx SINE Alu 1 312 0 352 258 82 82 chr11_random 1388658 1388764 -2097638 - L1ME4a LINE L1 -85 6036 5928 326 146 0 0 chr11_random 1388953 1389008 -2097394 - LTR67 LTR ERVL -13 544 490 924 286 99 9 chr11_random 1389312 1389401 -2097001 + L1MB7 LINE L1 4358 4438 -1708 237 33 0 0 chr11_random 1389401 1389431 -2096971 + (CA)n Simple_repeat Simple_repeat 2 31 0 924 286 99 9 chr11_random 1389431 1389775 -2096627 + L1MB7 LINE L1 4438 4830 -1316 481 212 44 22 chr11_random 1389776 1389913 -2096489 + L1MA9 LINE L1 6115 6254 -58 1843 156 3 0 chr11_random 1390061 1390356 -2096046 + AluJo SINE Alu 1 296 -16 2177 207 63 12 chr11_random 1390371 1390878 -2095524 + L1MB7 LINE L1 5652 6184 0 319 294 67 8 chr11_random 1390993 1391112 -2095290 + MIR SINE MIR 114 239 -23 392 255 157 0 chr11_random 1392498 1392640 -2093762 - MIR SINE MIR -36 226 58 241 286 0 0 chr11_random 1392831 1392887 -2093515 + MIR SINE MIR 84 139 -123 23 33 0 0 chr11_random 1397341 1397371 -2089031 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr11_random 1397587 1397608 -2088794 + AT_rich Low_complexity Low_complexity 1 21 0 211 102 20 20 chr11_random 1398181 1398230 -2088172 + (CCCCCG)n Simple_repeat Simple_repeat 2 50 0 21 57 0 0 chr11_random 1399191 1399226 -2087176 + GC_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr11_random 1399720 1399750 -2086652 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr11_random 1399912 1399951 -2086451 + GC_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr11_random 1400426 1400450 -2085952 + GC_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr11_random 1400533 1400554 -2085848 + GC_rich Low_complexity Low_complexity 1 21 0 192 156 26 0 chr11_random 1407042 1407086 -2079316 + MIR SINE MIR 101 144 -118 234 62 0 0 chr11_random 1408375 1408407 -2077995 + (GGA)n Simple_repeat Simple_repeat 2 33 0 279 54 0 0 chr11_random 1409937 1409974 -2076428 + (CA)n Simple_repeat Simple_repeat 2 38 0 180 0 0 0 chr11_random 1410938 1410958 -2075444 + (TTA)n Simple_repeat Simple_repeat 3 22 0 500 164 68 75 chr11_random 1411740 1411886 -2074516 - MER20 DNA MER1_type -53 166 22 2146 109 42 28 chr11_random 1413685 1414044 -2072358 - THE1B LTR MaLR 0 364 1 785 231 126 0 chr11_random 1416022 1416221 -2070181 - MER58A DNA MER1_type 0 224 1 339 256 0 0 chr11_random 1416221 1416299 -2070103 - MIR SINE MIR -124 138 61 342 304 122 0 chr11_random 1416578 1416693 -2069709 + MIR SINE MIR 18 146 -116 355 228 89 10 chr11_random 1417064 1417165 -2069237 + MLT1K LTR MaLR 36 144 -444 2510 51 10 0 chr11_random 1417601 1417897 -2068505 - AluY SINE Alu -12 299 1 864 228 128 106 chr11_random 1418520 1418845 -2067557 - MLT1C LTR MaLR -5 462 123 1913 121 3 62 chr11_random 1418845 1419152 -2067250 - AluSg SINE Alu -21 289 1 864 228 128 106 chr11_random 1419152 1419278 -2067124 - MLT1C LTR MaLR -344 123 1 2105 144 0 18 chr11_random 1420178 1420519 -2065883 + MER1B DNA MER1_type 3 337 0 1537 172 92 3 chr11_random 1421143 1421491 -2064911 + MLT1B LTR MaLR 1 379 -11 296 309 198 0 chr11_random 1421760 1421977 -2064425 - MLT1L LTR MaLR -104 511 252 295 219 37 24 chr11_random 1422371 1422453 -2063949 + GA-rich Low_complexity Low_complexity 3 85 0 362 268 45 18 chr11_random 1422758 1422870 -2063532 - L1ME4a LINE L1 -1 6120 6006 2082 149 0 0 chr11_random 1423043 1423351 -2063051 + AluSx SINE Alu 1 308 -4 310 327 152 0 chr11_random 1424091 1424256 -2062146 + MIR SINE MIR 57 246 -16 24 0 0 0 chr11_random 1424321 1424345 -2062057 + AT_rich Low_complexity Low_complexity 1 24 0 240 122 24 0 chr11_random 1425802 1425843 -2060559 + MLT1A2 LTR MaLR 277 318 -56 181 254 95 0 chr11_random 1425845 1425908 -2060494 + MIR SINE MIR 123 191 -71 2309 103 0 7 chr11_random 1425916 1426218 -2060184 + AluSx SINE Alu 1 300 -12 415 328 87 69 chr11_random 1426612 1427036 -2059366 + L1ME4a LINE L1 4578 4993 -1153 2091 106 34 0 chr11_random 1427036 1427329 -2059073 + AluSp SINE Alu 1 303 -10 2237 88 0 24 chr11_random 1427338 1427634 -2058768 + AluY SINE Alu 21 309 -2 415 328 87 69 chr11_random 1427634 1427863 -2058539 + L1ME4a LINE L1 5000 5253 -893 225 265 98 23 chr11_random 1427936 1428068 -2058334 + L1M2 LINE L1 5328 5469 -843 351 0 0 0 chr11_random 1428191 1428230 -2058172 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2137 125 10 0 chr11_random 1428235 1428531 -2057871 + AluSx SINE Alu 1 299 -13 424 348 28 4 chr11_random 1428540 1428790 -2057612 + L1ME4a LINE L1 5612 5867 -254 429 168 0 50 chr11_random 1428821 1428922 -2057480 + AluJ/FRAM SINE Alu 216 311 -1 1764 182 6 13 chr11_random 1428990 1429335 -2057067 + AluJo SINE Alu 1 312 0 392 267 27 33 chr11_random 1429335 1429485 -2056917 + L1ME4a LINE L1 5972 6120 -1 22 0 0 0 chr11_random 1429835 1429857 -2056545 + AT_rich Low_complexity Low_complexity 1 22 0 2354 115 3 0 chr11_random 1430156 1430468 -2055934 + AluSq SINE Alu 1 313 0 1355 192 126 4 chr11_random 1430571 1430826 -2055576 + AluJb SINE Alu 1 286 -26 835 136 0 12 chr11_random 1430826 1431081 -2055321 + (CA)n Simple_repeat Simple_repeat 1 251 0 2413 107 0 0 chr11_random 1431372 1431682 -2054720 + AluSq SINE Alu 1 310 -3 30 0 0 0 chr11_random 1431799 1431829 -2054573 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr11_random 1431939 1431960 -2054442 + (CAAAC)n Simple_repeat Simple_repeat 1 21 0 273 244 43 17 chr11_random 1432093 1432208 -2054194 + L1ME4a LINE L1 5955 6072 -49 2024 130 0 33 chr11_random 1432243 1432544 -2053858 + AluJb SINE Alu 2 292 -20 422 205 152 60 chr11_random 1433149 1433300 -2053102 - MLT1I LTR MaLR 0 409 278 317 197 26 13 chr11_random 1433365 1433441 -2052961 - MLT1J1 LTR MaLR -304 142 66 305 220 0 0 chr11_random 1433812 1433871 -2052531 + L2 LINE L2 3214 3272 0 862 117 0 0 chr11_random 1434126 1434237 -2052165 + AluSq/x SINE Alu 2 112 -200 2245 91 14 7 chr11_random 1434413 1434699 -2051703 + AluSx SINE Alu 1 288 -24 1828 144 81 3 chr11_random 1435348 1435633 -2050769 - AluJb SINE Alu -5 307 1 315 309 0 0 chr11_random 1435667 1435751 -2050651 + MIR SINE MIR 104 187 -75 2436 86 3 6 chr11_random 1436365 1436679 -2049723 - AluSq SINE Alu 0 313 1 1504 126 0 22 chr11_random 1437506 1437728 -2048674 + AluSg/x SINE Alu 86 302 -8 560 182 23 30 chr11_random 1437742 1437874 -2048528 - MLT1B LTR MaLR -256 134 4 234 227 0 0 chr11_random 1437883 1437927 -2048475 + (CA)n Simple_repeat Simple_repeat 2 45 0 334 314 151 21 chr11_random 1437943 1438103 -2048299 - L1MC4a LINE L1 -1676 6132 5930 1632 169 4 15 chr11_random 1438103 1438370 -2048032 - AluJo SINE Alu -14 298 35 334 314 151 21 chr11_random 1438370 1438448 -2047954 - L1MC4a LINE L1 -1878 5930 5863 403 256 31 97 chr11_random 1438449 1438676 -2047726 - MLT1I LTR MaLR -28 381 170 244 198 50 40 chr11_random 1438830 1438931 -2047471 - L1MC5 LINE L1 -212 7749 7648 454 222 32 24 chr11_random 1439002 1439128 -2047274 - MLT1B LTR MaLR -256 134 8 252 0 0 0 chr11_random 1439138 1439166 -2047236 + (CA)n Simple_repeat Simple_repeat 2 29 0 1807 161 4 0 chr11_random 1439340 1439607 -2046795 - AluJo SINE Alu -10 302 35 331 229 32 37 chr11_random 1439686 1439828 -2046574 - MLT1I LTR MaLR -28 381 252 317 282 154 34 chr11_random 1439927 1440239 -2046163 - L1MC5 LINE L1 0 8042 7580 561 191 24 16 chr11_random 1440241 1440327 -2046075 - MLT1B LTR MaLR -256 134 45 2178 131 0 0 chr11_random 1440327 1440624 -2045778 - AluSq SINE Alu -16 297 1 561 191 24 16 chr11_random 1440624 1440663 -2045739 - MLT1B LTR MaLR -345 45 8 186 103 0 0 chr11_random 1440679 1440708 -2045694 + (CA)n Simple_repeat Simple_repeat 2 30 0 238 319 0 32 chr11_random 1441015 1441109 -2045293 + GA-rich Low_complexity Low_complexity 1 91 0 2362 208 57 85 chr11_random 1441118 1441318 -2045084 + L1MDa LINE L1 1070 1274 -5266 2154 119 3 20 chr11_random 1441318 1441621 -2044781 + AluJb SINE Alu 1 298 -14 2478 186 9 2 chr11_random 1441628 1442086 -2044316 + MER65C LTR ERV1 1 461 0 2362 208 57 85 chr11_random 1442086 1442146 -2044256 + L1MDa LINE L1 1280 1340 -5200 2288 113 0 0 chr11_random 1442146 1442439 -2043963 + AluSc SINE Alu 1 293 -16 2362 208 57 85 chr11_random 1442439 1443127 -2043275 + L1MDa LINE L1 1340 2001 -4539 1839 121 4 8 chr11_random 1443128 1443385 -2043017 + AluSg SINE Alu 1 256 -54 1860 174 26 3 chr11_random 1443388 1443693 -2042709 + AluJo SINE Alu 1 312 0 1307 114 0 0 chr11_random 1443806 1443982 -2042420 - AluSg/x SINE Alu 0 312 137 193 314 24 101 chr11_random 1444116 1444285 -2042117 - MIR SINE MIR 0 262 107 200 254 8 102 chr11_random 1444428 1444546 -2041856 + MIR SINE MIR 17 123 -85 32 26 0 0 chr11_random 1444913 1444952 -2041450 + AT_rich Low_complexity Low_complexity 1 39 0 380 295 65 45 chr11_random 1445708 1445908 -2040494 + MIR SINE MIR 23 226 -36 199 182 0 0 chr11_random 1447051 1447084 -2039318 + MIR SINE MIR 223 255 -7 186 71 0 0 chr11_random 1447986 1448014 -2038388 + (A)n Simple_repeat Simple_repeat 1 28 0 2317 112 0 0 chr11_random 1448880 1449183 -2037219 - AluSg SINE Alu -7 303 1 372 256 254 3 chr11_random 1449514 1449702 -2036700 - MIR SINE MIR 0 262 34 925 237 116 14 chr11_random 1449977 1450429 -2035973 + MLT1F1 LTR MaLR 1 567 0 2099 134 3 3 chr11_random 1450785 1451083 -2035319 - AluSx SINE Alu -10 302 5 379 318 93 0 chr11_random 1451406 1451545 -2034857 + MIR3 SINE MIR 5 157 -51 241 359 77 0 chr11_random 1451545 1451662 -2034740 - MER5B DNA MER1_type -1 177 52 909 155 31 6 chr11_random 1451678 1451839 -2034563 - FRAM SINE Alu -1 165 1 2452 65 10 0 chr11_random 1451850 1452140 -2034262 - AluY SINE Alu -18 293 1 185 354 0 0 chr11_random 1452147 1452195 -2034207 + MER5B DNA MER1_type 123 170 -8 359 297 158 0 chr11_random 1452453 1452618 -2033784 + MIR SINE MIR 64 254 -8 2400 70 10 0 chr11_random 1453633 1453934 -2032468 + AluSx SINE Alu 6 309 -3 189 0 0 0 chr11_random 1454232 1454253 -2032149 + (A)n Simple_repeat Simple_repeat 1 21 0 2237 87 3 17 chr11_random 1454355 1454653 -2031749 - AluSx SINE Alu -18 294 1 862 117 0 0 chr11_random 1454829 1454940 -2031462 - AluSq/x SINE Alu -201 112 2 305 220 0 0 chr11_random 1455195 1455254 -2031148 - L2 LINE L2 0 3272 3214 317 197 26 13 chr11_random 1455625 1455701 -2030701 + MLT1J1 LTR MaLR 66 142 -304 422 205 152 60 chr11_random 1455766 1455917 -2030485 + MLT1I LTR MaLR 278 409 0 2014 130 0 33 chr11_random 1456522 1456822 -2029580 - AluJb SINE Alu -21 291 2 290 235 43 17 chr11_random 1456857 1456972 -2029430 - L1ME4a LINE L1 -49 6072 5955 189 0 0 0 chr11_random 1457104 1457125 -2029277 + (GTTTG)n Simple_repeat Simple_repeat 1 21 0 30 0 0 0 chr11_random 1457235 1457265 -2029137 + AT_rich Low_complexity Low_complexity 1 30 0 2257 123 7 0 chr11_random 1457382 1457690 -2028712 - AluSq SINE Alu -3 310 1 664 126 36 0 chr11_random 1457703 1457814 -2028588 - L1MC1 LINE L1 0 6333 6219 3015 163 15 21 chr11_random 1457814 1458388 -2028014 - L1MB3 LINE L1 -43 6140 5568 194 140 35 0 chr11_random 1458388 1458445 -2027957 + T-rich Low_complexity Low_complexity 3 61 0 421 287 16 0 chr11_random 1458722 1458844 -2027558 + MIR SINE MIR 113 236 -26 430 376 15 10 chr11_random 1459145 1459347 -2027055 - MIR SINE MIR -54 208 6 187 289 12 72 chr11_random 1459343 1459426 -2026976 + MIR SINE MIR 111 188 -74 * 223 299 58 46 chr11_random 1459756 1459843 -2026559 - L2 LINE L2 -213 3059 2972 1755 166 13 7 chr11_random 1460996 1461304 -2025098 - AluJo SINE Alu -2 310 1 1879 148 0 3 chr11_random 1461344 1461627 -2024775 - AluSx SINE Alu -30 282 1 322 254 9 26 chr11_random 1461634 1461748 -2024654 - Charlie2 DNA MER1_type -178 2684 2573 2318 103 0 0 chr11_random 1461808 1462119 -2024283 - AluSx SINE Alu -1 311 1 2219 106 0 0 chr11_random 1462176 1462469 -2023933 + AluSc SINE Alu 1 293 -16 2097 244 70 55 chr11_random 1462483 1463158 -2023244 + L1MDa LINE L1 1327 1990 -4550 1791 124 0 8 chr11_random 1463158 1463416 -2022986 + AluSg SINE Alu 1 256 -54 1729 184 26 3 chr11_random 1463419 1463724 -2022678 + AluJo SINE Alu 1 312 0 2097 244 70 55 chr11_random 1463724 1464030 -2022372 + L1MDa LINE L1 1991 2327 -4213 2157 175 6 6 chr11_random 1464048 1464396 -2022006 - MER7A DNA MER2_type 0 346 1 633 282 195 21 chr11_random 1464732 1465168 -2021234 + MLT1K LTR MaLR 69 580 -8 201 321 36 0 chr11_random 1465279 1465335 -2021067 - MIR SINE MIR -63 145 88 709 186 18 30 chr11_random 1465479 1465646 -2020756 + MER53 DNA DNA 23 187 -2 392 215 61 86 chr11_random 1466030 1466055 -2020347 + MER5B DNA MER1_type 20 44 -134 2331 84 0 0 chr11_random 1466055 1466351 -2020051 - AluY SINE Alu -15 296 1 392 215 61 86 chr11_random 1466351 1466416 -2019986 + MER5B DNA MER1_type 44 109 -69 1530 152 39 21 chr11_random 1466416 1466779 -2019623 + AluJo SINE Alu 1 312 0 392 215 61 86 chr11_random 1466779 1466850 -2019552 + MER5B DNA MER1_type 109 178 0 338 344 42 47 chr11_random 1466911 1467103 -2019299 - MIR SINE MIR -39 223 33 361 260 67 0 chr11_random 1467905 1468009 -2018393 + MER20 DNA MER1_type 1 111 -108 235 154 0 0 chr11_random 1469111 1469150 -2017252 + L3 LINE CR1 1426 1464 -113 1773 170 0 10 chr11_random 1469974 1470280 -2016122 + AluJb SINE Alu 1 303 -9 277 261 46 7 chr11_random 1470288 1470441 -2015961 + (TA)n Simple_repeat Simple_repeat 2 160 0 190 330 76 25 chr11_random 1470614 1470732 -2015670 + L2 LINE L2 3118 3241 -72 1887 102 0 40 chr11_random 1471299 1471414 -2014988 + AluSq SINE Alu 21 139 -174 2171 118 0 9 chr11_random 1471414 1471729 -2014673 + AluSq SINE Alu 1 312 -1 1887 102 0 40 chr11_random 1471729 1471887 -2014515 + AluSq SINE Alu 139 283 -30 899 204 44 6 chr11_random 1471986 1472167 -2014235 + MER53 DNA DNA 1 188 -1 503 295 51 11 chr11_random 1472372 1472552 -2013850 - MIR3 SINE MIR -6 202 15 331 337 178 20 chr11_random 1473179 1473583 -2012819 - L2 LINE L2 0 3313 2846 744 256 97 51 chr11_random 1473858 1474230 -2012172 + MLT1C LTR MaLR 8 404 -63 2121 126 0 3 chr11_random 1474230 1474539 -2011863 - AluSg SINE Alu -2 308 1 744 256 97 51 chr11_random 1474539 1474599 -2011803 + MLT1C LTR MaLR 404 460 -7 2304 107 0 0 chr11_random 1474754 1475062 -2011340 + AluSx SINE Alu 1 308 -4 275 267 37 29 chr11_random 1475066 1475195 -2011207 + MIR SINE MIR 50 181 -27 264 164 18 18 chr11_random 1475781 1475836 -2010566 + MIR SINE MIR 63 117 -145 1237 197 88 44 chr11_random 1475943 1476104 -2010298 + MLT1B LTR MaLR 8 160 -307 2021 120 0 0 chr11_random 1476104 1476408 -2009994 + AluJb SINE Alu 1 304 0 1237 197 88 44 chr11_random 1476408 1476612 -2009790 + MLT1B LTR MaLR 160 465 -2 2203 82 3 10 chr11_random 1476953 1477290 -2009112 - AluSp SINE Alu 0 313 1 1949 118 38 3 chr11_random 1477292 1477580 -2008822 - AluSx SINE Alu -14 298 1 198 0 0 0 chr11_random 1477785 1477807 -2008595 + (T)n Simple_repeat Simple_repeat 1 22 0 269 248 14 6 chr11_random 1478313 1478400 -2008002 + MIR SINE MIR 61 146 -62 330 260 146 38 chr11_random 1479480 1479768 -2006634 - L1ME4a LINE L1 -206 5915 5597 697 174 0 49 chr11_random 1479776 1479832 -2006570 + L1MA4A LINE L1 6102 6159 -144 2440 82 0 0 chr11_random 1479832 1480137 -2006265 - AluSq SINE Alu -8 305 1 697 174 0 49 chr11_random 1480137 1480224 -2006178 + L1MA4A LINE L1 6159 6238 -65 1732 157 18 0 chr11_random 1480227 1480508 -2005894 + AluJo SINE Alu 1 286 -26 423 56 28 0 chr11_random 1480558 1480630 -2005772 + L1MA4A LINE L1 6225 6298 -5 636 186 55 43 chr11_random 1480781 1480813 -2005589 - L1MC2 LINE L1 0 7768 7738 2133 100 0 0 chr11_random 1480813 1481118 -2005284 + AluSg SINE Alu 1 305 0 636 186 55 43 chr11_random 1481118 1481430 -2004972 - L1MC2 LINE L1 -30 7738 6135 1103 77 7 0 chr11_random 1481432 1481587 -2004815 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 1166 156 0 35 chr11_random 1481596 1481795 -2004607 - AluJo SINE Alu -36 276 85 2122 147 0 0 chr11_random 1481804 1482116 -2004286 - AluSx SINE Alu 0 312 1 2493 55 0 0 chr11_random 1483012 1483323 -2003079 - AluY SINE Alu 0 311 1 443 298 27 58 chr11_random 1483969 1484157 -2002245 + MIR SINE MIR 19 200 -62 2197 118 0 3 chr11_random 1484917 1485223 -2001179 - AluSq SINE Alu -8 305 1 1267 286 76 0 chr11_random 1485699 1486118 -2000284 + MLT1J LTR MaLR 27 477 -34 2251 80 17 0 chr11_random 1486241 1486540 -1999862 - AluY SINE Alu -7 304 1 204 40 0 0 chr11_random 1486542 1486567 -1999835 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2123 92 0 0 chr11_random 1486567 1486850 -1999552 - AluY SINE Alu -28 283 1 913 344 44 50 chr11_random 1486907 1487431 -1998971 - L1M4 LINE L1 -2682 3464 2944 1958 110 7 0 chr11_random 1487446 1487728 -1998674 - AluY SINE Alu -27 284 1 418 351 45 8 chr11_random 1487830 1488098 -1998304 + MER113 DNA MER1_type? 242 519 -2 1906 133 4 0 chr11_random 1488098 1488377 -1998025 + AluSx SINE Alu 29 308 -4 1734 238 56 44 chr11_random 1489660 1490210 -1996192 - MLT1G LTR MaLR -3 587 31 1235 243 74 21 chr11_random 1490625 1491044 -1995358 - MER113 DNA MER1_type? -34 487 47 302 291 34 81 chr11_random 1491118 1491266 -1995136 - MIR SINE MIR -80 182 42 863 128 13 13 chr11_random 1492017 1492173 -1994229 + MLT1A1 LTR MaLR 1 156 -209 1015 98 201 11 chr11_random 1492174 1492358 -1994044 + AluSg1 SINE Alu 1 219 -90 1948 105 0 0 chr11_random 1492358 1492625 -1993777 + AluSg SINE Alu 32 298 -12 1040 152 0 0 chr11_random 1492626 1492784 -1993618 + AluSg/x SINE Alu 133 290 -19 291 118 20 0 chr11_random 1492785 1492836 -1993566 + MLT1A1 LTR MaLR 150 201 -164 430 106 0 0 chr11_random 1492863 1492929 -1993473 + MSTA LTR MaLR 1 66 -362 231 122 0 0 chr11_random 1492927 1492968 -1993434 + Alu SINE Alu 257 297 -4 * 204 333 18 45 chr11_random 1493151 1493262 -1993140 - L2 LINE L2 -23 3249 3142 780 258 68 11 chr11_random 1493453 1493732 -1992670 + LTR16A1 LTR ERVL 161 455 -2 1315 216 50 30 chr11_random 1493940 1494373 -1992029 + MLT1C LTR MaLR 4 459 -8 210 279 66 44 chr11_random 1494396 1494532 -1991870 - L2 LINE L2 -336 2977 2839 1052 264 185 9 chr11_random 1494576 1495041 -1991361 + MLT1H1 LTR MaLR 8 554 -1 1509 167 0 4 chr11_random 1495694 1495933 -1990469 - AluJo SINE Alu -74 238 1 2277 82 6 13 chr11_random 1495976 1496291 -1990111 + AluSp SINE Alu 1 313 0 742 182 53 5 chr11_random 1496505 1496811 -1989591 + MER44D DNA MER2_type 103 527 -78 1876 117 47 3 chr11_random 1496863 1497163 -1989239 + AluSq SINE Alu 1 313 0 368 317 86 0 chr11_random 1497163 1497304 -1989098 + L1M4 LINE L1 1042 3234 -1312 194 268 0 54 chr11_random 1498820 1498876 -1987526 + MIR3 SINE MIR 104 156 -52 210 327 56 19 chr11_random 1499223 1499330 -1987072 + MIR SINE MIR 48 158 -104 334 233 124 47 chr11_random 1499657 1499786 -1986616 + L2 LINE L2 3172 3310 -3 1688 146 56 17 chr11_random 1500035 1500322 -1986080 - AluJo SINE Alu -14 298 1 325 278 52 10 chr11_random 1500451 1500548 -1985854 + MIR SINE MIR 49 149 -113 2243 95 13 0 chr11_random 1501273 1501577 -1984825 + AluSx SINE Alu 5 312 0 225 362 123 18 chr11_random 1501581 1501930 -1984472 - L2 LINE L2 -208 3105 2714 187 329 26 0 chr11_random 1501991 1502067 -1984335 + L2 LINE L2 3173 3250 -22 297 285 90 74 chr11_random 1502757 1502981 -1983421 - L1ME4a LINE L1 -3 6118 5886 1951 106 0 0 chr11_random 1502981 1503246 -1983156 - AluSc SINE Alu -7 302 38 297 285 90 74 chr11_random 1503246 1503344 -1983058 - L1ME4a LINE L1 -235 5886 5791 2300 104 7 0 chr11_random 1503388 1503697 -1982705 - AluSx SINE Alu -1 311 1 1285 256 122 24 chr11_random 1503708 1504231 -1982171 - L1MB2 LINE L1 0 6171 5604 2207 104 13 0 chr11_random 1504231 1504540 -1981862 - AluSp SINE Alu 0 313 1 1285 256 122 24 chr11_random 1504540 1504566 -1981836 - L1MB2 LINE L1 -567 5604 5582 200 135 27 0 chr11_random 1504671 1504708 -1981694 + (CTTTG)n Simple_repeat Simple_repeat 5 42 0 198 273 0 36 chr11_random 1506062 1506117 -1980285 - MIR SINE MIR -140 122 70 363 300 84 16 chr11_random 1506733 1506923 -1979479 + L2 LINE L2 2549 2751 -563 1794 78 4 0 chr11_random 1506923 1507155 -1979247 + AluSg SINE Alu 1 233 -77 204 125 0 0 chr11_random 1507343 1507375 -1979027 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 2345 69 0 0 chr11_random 1507593 1507883 -1978519 - AluY SINE Alu -21 290 1 2165 115 0 6 chr11_random 1507955 1508269 -1978133 - AluSx SINE Alu 0 312 1 259 278 155 32 chr11_random 1508270 1508457 -1977945 - L1ME LINE L1 -331 5831 5622 953 221 48 63 chr11_random 1508465 1508582 -1977820 + MLT1H1 LTR MaLR 168 285 -270 261 0 0 0 chr11_random 1508582 1508611 -1977791 + (GA)n Simple_repeat Simple_repeat 2 30 0 189 0 0 0 chr11_random 1508612 1508633 -1977769 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 953 221 48 63 chr11_random 1508633 1508907 -1977495 + MLT1H1 LTR MaLR 284 555 0 1256 39 17 17 chr11_random 1509520 1509700 -1976702 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 562 212 11 17 chr11_random 1509704 1509883 -1976519 + CT-rich Low_complexity Low_complexity 2 179 0 436 227 31 23 chr11_random 1510457 1510585 -1975817 + MIR SINE MIR 66 194 -68 897 152 0 0 chr11_random 1511421 1511572 -1974830 + AluJb SINE Alu 162 312 0 235 284 0 0 chr11_random 1512449 1512516 -1973886 + MIR SINE MIR 46 112 -150 2550 109 27 8 chr11_random 1513009 1513377 -1973025 + THE1C LTR MaLR 1 375 0 348 284 42 37 chr11_random 1513398 1513613 -1972789 + L2 LINE L2 2236 2451 -863 273 200 33 0 chr11_random 1513752 1513812 -1972590 + L2 LINE L2 2755 2816 -498 245 250 94 0 chr11_random 1513965 1514061 -1972341 + MLT1G LTR MaLR 451 555 -35 338 323 0 24 chr11_random 1514986 1515110 -1971292 + MIR SINE MIR 70 190 -72 270 0 0 0 chr11_random 1515367 1515397 -1971005 + (CA)n Simple_repeat Simple_repeat 1 30 0 218 321 131 15 chr11_random 1517264 1517401 -1969001 + MIR SINE MIR 110 262 0 2069 124 0 0 chr11_random 1517549 1517858 -1968544 - AluSx SINE Alu 0 309 1 467 277 78 86 chr11_random 1517878 1518202 -1968200 - L1ME3A LINE L1 -70 6100 5778 650 75 0 0 chr11_random 1518202 1518282 -1968120 + MADE1 DNA Mariner 1 80 0 467 277 78 86 chr11_random 1518282 1518365 -1968037 - L1ME3A LINE L1 -392 5778 5696 780 171 0 0 chr11_random 1518439 1518556 -1967846 + AluJb SINE Alu 135 251 -61 1300 108 5 0 chr11_random 1518616 1518802 -1967600 + AluSq SINE Alu 123 309 -4 198 0 0 0 chr11_random 1518879 1518901 -1967501 + (T)n Simple_repeat Simple_repeat 1 22 0 2342 78 0 0 chr11_random 1519061 1519355 -1967047 - AluY SINE Alu -14 297 4 2293 110 0 0 chr11_random 1519756 1520066 -1966336 + AluSx SINE Alu 1 310 -2 2051 204 110 30 chr11_random 1521679 1522180 -1964222 + MLT1F LTR MaLR 2 542 0 2137 109 0 0 chr11_random 1522180 1522495 -1963907 + AluSx SINE Alu 1 315 0 312 271 141 26 chr11_random 1522514 1522706 -1963696 - MIR SINE MIR -12 250 37 2131 103 0 7 chr11_random 1522823 1523123 -1963279 - AluSq SINE Alu -15 298 1 1370 248 65 36 chr11_random 1523172 1523453 -1962949 - MLT1C LTR MaLR -1 466 166 2206 118 0 6 chr11_random 1523453 1523767 -1962635 - AluSq SINE Alu -1 312 1 1370 248 65 36 chr11_random 1523767 1523933 -1962469 - MLT1C LTR MaLR -301 166 6 413 288 29 22 chr11_random 1523979 1524118 -1962284 - MIR SINE MIR -80 182 43 384 280 115 28 chr11_random 1524848 1525030 -1961372 - L2 LINE L2 -3 3310 3113 723 88 0 0 chr11_random 1525046 1525137 -1961265 + AluS SINE Alu 11 101 -212 1872 183 69 32 chr11_random 1525529 1525966 -1960436 - MLT1C LTR MaLR -14 453 1 804 157 0 0 chr11_random 1526027 1526148 -1960254 + AluJb SINE Alu 1 121 -191 225 239 0 64 chr11_random 1526376 1526485 -1959917 + MER112 DNA MER1_type 80 181 -79 2127 106 24 0 chr11_random 1526496 1526788 -1959614 + AluSq SINE Alu 1 299 -14 23 0 0 0 chr11_random 1529388 1529411 -1956991 + AT_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr11_random 1530254 1530280 -1956122 + (A)n Simple_repeat Simple_repeat 1 26 0 2373 82 0 0 chr11_random 1530676 1530981 -1955421 + AluSx SINE Alu 1 305 -7 2004 136 0 22 chr11_random 1531160 1531297 -1955105 + AluSx SINE Alu 1 140 -172 2039 121 3 7 chr11_random 1531297 1531594 -1954808 + AluSc SINE Alu 1 296 -13 2004 136 0 22 chr11_random 1531594 1531773 -1954629 + AluSx SINE Alu 140 310 -2 205 309 65 58 chr11_random 1532723 1532764 -1953638 - MIR3 SINE MIR -15 193 154 1612 189 10 7 chr11_random 1532764 1533066 -1953336 + AluJb SINE Alu 1 303 -9 205 309 65 58 chr11_random 1533066 1533163 -1953239 - MIR3 SINE MIR -54 154 54 2318 70 0 3 chr11_random 1533242 1533543 -1952859 - AluY SINE Alu -11 300 1 990 152 86 10 chr11_random 1533614 1533812 -1952590 + L1MB5 LINE L1 5962 6174 0 230 167 19 37 chr11_random 1533823 1533837 -1952565 + A-rich Low_complexity Low_complexity 2 15 -39 2030 102 65 0 chr11_random 1533837 1534130 -1952272 + AluSx SINE Alu 1 312 0 230 167 19 37 chr11_random 1534130 1534169 -1952233 + A-rich Low_complexity Low_complexity 15 54 0 1096 72 0 0 chr11_random 1534347 1534485 -1951917 - AluSq/x SINE Alu -174 138 1 235 182 0 0 chr11_random 1534763 1534807 -1951595 - L1ME LINE L1 -368 5753 5710 2180 110 0 7 chr11_random 1534878 1535187 -1951215 - AluSx SINE Alu -5 307 1 270 274 12 95 chr11_random 1535584 1535752 -1950650 - L2 LINE L2 -1 3312 3159 2089 106 0 0 chr11_random 1535763 1536045 -1950357 + AluSq SINE Alu 30 311 -2 269 98 0 39 chr11_random 1536045 1536096 -1950306 + (GGAGAA)n Simple_repeat Simple_repeat 1 49 0 1658 153 35 14 chr11_random 1536099 1536381 -1950021 + AluJb SINE Alu 1 288 -24 226 227 0 0 chr11_random 1536509 1536553 -1949849 - MER91 DNA MER1_type -96 44 1 273 269 115 0 chr11_random 1536819 1536897 -1949505 - MIR SINE MIR -117 145 59 291 54 0 0 chr11_random 1537770 1537807 -1948595 + (T)n Simple_repeat Simple_repeat 1 37 0 743 109 0 0 chr11_random 1537949 1538050 -1948352 - AluS SINE Alu -210 102 2 857 209 23 0 chr11_random 1538052 1538224 -1948178 + MER58B DNA MER1_type 157 332 -9 2258 84 0 7 chr11_random 1538280 1538576 -1947826 - AluSg SINE Alu -16 294 1 257 226 0 0 chr11_random 1538583 1538645 -1947757 - L1ME LINE L1 -462 5659 5598 700 183 11 17 chr11_random 1538967 1539147 -1947255 + CT-rich Low_complexity Low_complexity 1 179 0 1792 152 4 0 chr11_random 1539155 1539432 -1946970 - AluSx SINE Alu -2 310 33 2253 78 3 19 chr11_random 1539432 1539738 -1946664 - AluY SINE Alu -8 303 1 602 289 98 18 chr11_random 1539738 1540015 -1946387 - Charlie2a DNA MER1_type -603 2259 1961 1207 177 4 9 chr11_random 1540026 1540252 -1946150 - AluJb SINE Alu -5 307 83 832 276 78 51 chr11_random 1540290 1540341 -1946061 - Charlie2a DNA MER1_type -978 1884 1836 1938 121 4 0 chr11_random 1540341 1540652 -1945750 - AluSg SINE Alu 0 312 1 832 276 78 51 chr11_random 1540652 1541008 -1945394 - Charlie2a DNA MER1_type -1026 1836 1465 1329 124 18 14 chr11_random 1541159 1541377 -1945025 - MER30 DNA MER1_type -8 222 4 2064 106 20 3 chr11_random 1541377 1541669 -1944733 + AluSq SINE Alu 1 297 -16 1939 105 3 14 chr11_random 1541671 1541987 -1944415 + AluSp SINE Alu 14 313 0 275 244 0 24 chr11_random 1542384 1542466 -1943936 + L1ME2 LINE L1 6051 6130 -34 728 175 13 13 chr11_random 1542547 1542701 -1943701 - L1MB3 LINE L1 -1 6182 6029 2018 127 23 0 chr11_random 1542701 1543000 -1943402 + AluSx SINE Alu 1 306 -6 258 211 70 28 chr11_random 1543135 1543206 -1943196 - L1MB3 LINE L1 -2047 5761 5688 338 291 69 53 chr11_random 1543365 1543554 -1942848 - MIR SINE MIR -48 214 23 312 275 216 30 chr11_random 1544266 1544433 -1941969 - MIR SINE MIR -28 234 37 1593 151 4 0 chr11_random 1544499 1544744 -1941658 + AluJb SINE Alu 1 246 -66 180 0 0 0 chr11_random 1544744 1544764 -1941638 + (A)n Simple_repeat Simple_repeat 1 20 0 249 294 120 84 chr11_random 1545338 1545695 -1940707 + L2 LINE L2 2897 3266 -6 1890 155 0 3 chr11_random 1546166 1546463 -1939939 - AluSx SINE Alu -16 296 1 2180 104 0 3 chr11_random 1546494 1546793 -1939609 + AluSq SINE Alu 1 298 -15 217 139 25 38 chr11_random 1547331 1547410 -1938992 + CT-rich Low_complexity Low_complexity 3 80 0 412 273 47 0 chr11_random 1548220 1548348 -1938054 - MLT1B LTR MaLR -3 387 254 386 290 77 32 chr11_random 1548398 1548619 -1937783 - MLT1B LTR MaLR -270 235 5 260 237 240 9 chr11_random 1548962 1549185 -1937217 - L2 LINE L2 -278 3035 2759 328 245 85 11 chr11_random 1549606 1549700 -1936702 + Tigger7 DNA MER2_type 8 108 -2379 2154 102 3 19 chr11_random 1549702 1550017 -1936385 - AluSx SINE Alu -2 310 1 550 131 12 0 chr11_random 1550239 1550321 -1936081 - Tigger7 DNA MER2_type 0 2487 2405 1484 136 13 0 chr11_random 1550321 1550557 -1935845 + MER2 DNA MER2_type 1 239 -106 182 239 239 0 chr11_random 1550943 1551031 -1935371 - MIR SINE MIR -94 168 60 278 275 58 33 chr11_random 1551442 1551562 -1934840 + MIR SINE MIR 70 192 -70 227 217 0 72 chr11_random 1552103 1552172 -1934230 + GA-rich Low_complexity Low_complexity 3 66 0 185 179 77 0 chr11_random 1552216 1552255 -1934147 + MIR3 SINE MIR 119 160 -48 181 226 0 81 chr11_random 1552693 1552755 -1933647 - L2 LINE L2 -371 2943 2887 235 274 0 0 chr11_random 1552760 1552811 -1933591 + CT-rich Low_complexity Low_complexity 3 53 0 288 298 12 54 chr11_random 1552833 1553001 -1933401 - L2 LINE L2 -35 3278 3118 394 379 0 6 chr11_random 1553095 1553269 -1933133 + (CA)n Simple_repeat Simple_repeat 2 174 0 300 91 0 0 chr11_random 1553329 1553373 -1933029 + (CA)n Simple_repeat Simple_repeat 1 44 0 1415 79 37 0 chr11_random 1754531 1754721 -1731681 - MER107 DNA MER1_type 0 197 1 1461 208 52 75 chr11_random 1755020 1755462 -1730940 + MSTB1 LTR MaLR 1 432 0 230 293 25 117 chr11_random 1757839 1758078 -1728324 + L2 LINE L2 3040 3256 -16 345 250 179 9 chr11_random 1759153 1759265 -1727137 - MIR SINE MIR -30 232 102 411 322 100 11 chr11_random 1759306 1759486 -1726916 + MIR SINE MIR 55 250 -12 411 320 10 46 chr11_random 1760654 1760848 -1725554 + MIR SINE MIR 20 206 -56 488 311 132 13 chr11_random 1760892 1761120 -1725282 + MIR SINE MIR 8 262 0 1016 243 39 25 chr11_random 1761358 1761696 -1724706 - L1M4 LINE L1 -612 6060 5719 7022 241 86 26 chr11_random 1761912 1763135 -1723267 - L1M4 LINE L1 -1440 5204 4056 1711 164 0 32 chr11_random 1763135 1763447 -1722955 - AluJo SINE Alu -10 302 1 7022 241 86 26 chr11_random 1763447 1766222 -1720180 - L1M4 LINE L1 -2588 4056 775 2079 142 0 0 chr11_random 1766222 1766532 -1719870 - AluSg SINE Alu 0 310 1 7022 241 86 26 chr11_random 1766532 1767343 -1719059 - L1M4 LINE L1 -5869 775 14 1855 211 74 42 chr11_random 1768434 1768960 -1717442 - MER44D DNA MER2_type -7 598 1 372 132 0 4 chr11_random 1770248 1770462 -1715940 + AluJb SINE Alu 1 298 -4 360 179 0 0 chr11_random 1771096 1771174 -1715228 + (TCCA)n Simple_repeat Simple_repeat 4 81 0 1209 117 0 2 chr11_random 1771197 1771556 -1714846 + (TCCA)n Simple_repeat Simple_repeat 1 539 0 511 341 147 18 chr11_random 1771576 1771910 -1714492 + L2 LINE L2 2928 3304 -9 249 252 173 79 chr11_random 1772032 1772246 -1714156 - MIR SINE MIR -26 236 3 288 256 165 23 chr11_random 1772346 1772479 -1713923 + MARNA DNA Mariner 268 419 -167 588 243 28 21 chr11_random 1773217 1773361 -1713041 - MIR SINE MIR -4 258 114 426 291 57 48 chr11_random 1773500 1773529 -1712873 - MIR SINE MIR -34 228 201 1773 158 80 0 chr11_random 1773529 1773840 -1712562 + MER1B DNA MER1_type 2 337 0 426 291 57 48 chr11_random 1773840 1774020 -1712382 - MIR SINE MIR -61 201 17 288 375 42 36 chr11_random 1774010 1774394 -1712008 - L2 LINE L2 -378 2936 2551 * 245 308 63 50 chr11_random 1775721 1775880 -1710522 - L3b LINE CR1 -218 1365 1205 397 148 43 25 chr11_random 1776643 1776805 -1709597 + (TAGA)n Simple_repeat Simple_repeat 2 166 0 398 269 126 34 chr11_random 1777344 1777519 -1708883 + MIR SINE MIR 35 225 -37 2327 30 0 34 chr11_random 1778743 1779039 -1707363 + AluY SINE Alu 1 286 -25 25 31 0 0 chr11_random 1779039 1779071 -1707331 + AT_rich Low_complexity Low_complexity 1 32 0 1279 233 17 3 chr11_random 1782063 1782363 -1704039 + AluJo SINE Alu 1 304 -8 1329 213 25 63 chr11_random 1782363 1782790 -1703612 + L1MB5 LINE L1 5758 6166 -8 283 130 22 0 chr11_random 1783008 1783054 -1703348 + MADE1 DNA Mariner 1 47 -33 1184 261 47 0 chr11_random 1783085 1783403 -1702999 + LTR53 LTR ERVL 1 333 -186 736 203 14 7 chr11_random 1783403 1783551 -1702851 + HERVL74 LTR ERVL 2940 3088 -2597 196 269 231 0 chr11_random 1783885 1783963 -1702439 + MIR SINE MIR 56 151 -57 2389 69 0 3 chr11_random 1784024 1784330 -1702072 - AluY SINE Alu -6 305 1 279 310 19 56 chr11_random 1784518 1784734 -1701668 + L1M4c LINE L1 1 208 -6822 2970 260 59 42 chr11_random 1785060 1785116 -1701286 + L1M4c LINE L1 1272 1326 -5782 354 61 0 0 chr11_random 1785116 1785165 -1701237 + (CA)n Simple_repeat Simple_repeat 1 49 0 2970 260 59 42 chr11_random 1785165 1786417 -1699985 + L1M4c LINE L1 1326 2602 -4506 1306 176 59 0 chr11_random 1786420 1786693 -1699709 + L1MB3 LINE L1 5881 6169 -14 24 0 0 0 chr11_random 1786734 1786758 -1699644 + AT_rich Low_complexity Low_complexity 1 24 0 555 208 0 0 chr11_random 1786778 1786874 -1699528 - FLAM_A SINE Alu -22 120 25 885 186 62 0 chr11_random 1787021 1787182 -1699220 + FAM SINE Alu 1 171 -4 836 341 76 19 chr11_random 1787492 1787976 -1698426 - L2 LINE L2 -578 2736 2225 221 290 0 87 chr11_random 1788002 1788140 -1698262 - L2 LINE L2 -1230 2084 1959 1626 222 34 8 chr11_random 1789048 1789404 -1696998 - MLT1A1 LTR MaLR 0 365 1 297 282 29 100 chr11_random 1789572 1789742 -1696660 - MIR3 SINE MIR -28 180 23 230 298 22 29 chr11_random 1790403 1790513 -1695889 - MIR SINE MIR -95 113 21 212 319 0 42 chr11_random 1790597 1790619 -1695783 - L2 LINE L2 -66 3206 3185 2160 136 32 16 chr11_random 1790619 1790988 -1695414 + THE1C LTR MaLR 1 375 0 212 319 0 42 chr11_random 1790988 1791037 -1695365 - L2 LINE L2 -87 3185 3138 299 216 23 34 chr11_random 1791041 1791114 -1695288 + MER84 LTR ERVI 1 74 -433 3038 143 33 0 chr11_random 1791114 1791604 -1694798 + MER84 LTR ERV1 2 507 0 299 216 23 34 chr11_random 1791604 1791618 -1694784 + MER84 LTR ERVI 74 87 -420 1978 137 0 0 chr11_random 1791663 1791956 -1694446 + AluSx SINE Alu 1 293 -19 442 284 58 54 chr11_random 1793864 1794085 -1692317 - MIR SINE MIR -19 243 17 409 205 116 0 chr11_random 1796549 1796661 -1689741 + MER53 DNA DNA 3 127 -62 283 304 25 0 chr11_random 1801204 1801283 -1685119 + MER94 DNA DNA 1 81 -53 402 261 130 0 chr11_random 1802131 1802246 -1684156 + HERVL74 LTR ERVL 3179 3308 -2377 2475 191 35 18 chr11_random 1802485 1803007 -1683395 + MER41B LTR ERV1 111 466 -12 1886 229 56 28 chr11_random 1803065 1803568 -1682834 + LTR53 LTR ERVL 2 518 -1 329 294 22 11 chr11_random 1803864 1803956 -1682446 - MER5A DNA MER1_type -83 106 14 525 316 29 6 chr11_random 1803977 1804151 -1682251 + MER5B DNA MER1_type 1 178 0 805 168 5 86 chr11_random 1804161 1804370 -1682032 - MER106A DNA MER1_type -2 234 43 657 58 0 0 chr11_random 1804629 1804715 -1681687 + (TG)n Simple_repeat Simple_repeat 1 86 0 233 216 155 17 chr11_random 1805048 1805164 -1681238 + L1ME4a LINE L1 5989 6120 -1 255 211 0 0 chr11_random 1805312 1805402 -1681000 + CT-rich Low_complexity Low_complexity 1 90 0 1715 159 20 19 chr11_random 1805952 1806304 -1680098 + MER4A LTR ERV1 254 664 0 343 188 94 10 chr11_random 1806306 1806402 -1680000 - L1MD3 LINE L1 -127 7868 7765 * 1121 215 41 22 chr11_random 1806371 1806641 -1679761 - L1MD3 LINE L1 -1088 6907 6633 * 2101 259 60 19 chr11_random 1806621 1807581 -1678821 - L1MD3 LINE L1 -77 6087 5098 241 194 0 30 chr11_random 1808664 1808731 -1677671 + (CA)n Simple_repeat Simple_repeat 2 66 0 218 204 0 20 chr11_random 1808780 1808829 -1677573 + CT-rich Low_complexity Low_complexity 1 48 0 837 110 0 0 chr11_random 1808838 1808965 -1677437 + (TTCC)n Simple_repeat Simple_repeat 4 130 0 1088 231 39 29 chr11_random 1809655 1809962 -1676440 + MER66A LTR ERV1 41 350 -128 1945 130 0 0 chr11_random 1809987 1810301 -1676101 + AluSq SINE Alu 6 319 0 9212 99 26 3 chr11_random 1810301 1811655 -1674747 - L1P LINE L1 -2563 3583 2199 12719 87 0 0 chr11_random 1811655 1814173 -1672229 + L1PA7 LINE L1 3632 6146 -8 354 183 0 0 chr11_random 1814180 1814240 -1672162 + MER66B LTR ERV1 380 439 -47 261 273 66 76 chr11_random 1814254 1814373 -1672029 + MIR SINE MIR 71 191 -48 521 274 120 70 chr11_random 1814379 1815183 -1671219 + L1MC4 LINE L1 6681 7538 -423 2278 71 0 7 chr11_random 1815183 1815477 -1670925 + AluY SINE Alu 1 292 -19 521 274 120 70 chr11_random 1815477 1815579 -1670823 + L1MC4 LINE L1 7538 7633 -328 737 262 37 68 chr11_random 1815685 1816067 -1670335 - L1MDb LINE L1 -5278 1131 762 2153 67 32 3 chr11_random 1816280 1816445 -1669957 - AluY SINE Alu -18 293 115 183 42 0 0 chr11_random 1816445 1816469 -1669933 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2153 67 32 3 chr11_random 1816469 1816588 -1669814 - AluY SINE Alu -196 115 1 361 276 55 0 chr11_random 1816690 1816817 -1669585 - L1MC4a LINE L1 -1957 5851 5718 21 36 0 0 chr11_random 1817890 1817918 -1668484 + AT_rich Low_complexity Low_complexity 1 28 0 368 229 70 64 chr11_random 1818416 1818573 -1667829 + LTR50 LTR ERVL 21 178 -617 432 165 63 13 chr11_random 1819171 1819250 -1667152 - MER2 DNA MER2_type 0 345 263 776 182 6 71 chr11_random 1819287 1819457 -1666945 + FRAM SINE Alu 1 158 -18 772 176 20 70 chr11_random 1819471 1819670 -1666732 - MER2 DNA MER2_type -139 206 18 210 231 141 26 chr11_random 1819678 1819756 -1666646 + MIR SINE MIR 176 262 0 180 0 0 0 chr11_random 1820504 1820524 -1665878 + (TATG)n Simple_repeat Simple_repeat 2 21 0 291 93 0 0 chr11_random 1821433 1821476 -1664926 + (GGA)n Simple_repeat Simple_repeat 3 45 0 1811 192 37 6 chr11_random 1822294 1822648 -1663754 - MLT1A1 LTR MaLR 0 365 1 1639 223 39 5 chr11_random 1822666 1823047 -1663355 - MLT1A1-int LTR MaLR -27 1708 1315 283 349 6 18 chr11_random 1826281 1826450 -1659952 + CT-rich Low_complexity Low_complexity 4 170 0 384 330 51 11 chr11_random 1827428 1827604 -1658798 - MIR3 SINE MIR -21 187 5 193 197 155 56 chr11_random 1827689 1827760 -1658642 - L2 LINE L2 -70 3243 3166 265 221 7 7 chr11_random 1828163 1828305 -1658097 + (TG)n Simple_repeat Simple_repeat 1 142 0 412 328 95 44 chr11_random 1828311 1828786 -1657616 - L2 LINE L2 -641 2673 2175 2236 189 71 17 chr11_random 1829188 1829320 -1657082 - L1MA9 LINE L1 -10 6302 6179 189 0 0 0 chr11_random 1829320 1829341 -1657061 + (TG)n Simple_repeat Simple_repeat 2 22 0 2236 189 71 17 chr11_random 1829341 1829699 -1656703 - L1MA9 LINE L1 -133 6179 5780 198 71 0 0 chr11_random 1829699 1829727 -1656675 + (TG)n Simple_repeat Simple_repeat 2 29 0 2236 189 71 17 chr11_random 1829727 1829758 -1656644 - L1MA9 LINE L1 -532 5780 5752 * 2552 168 14 23 chr11_random 1829755 1830310 -1656092 + L1MA9 LINE L1 5203 5759 -553 192 304 0 0 chr11_random 1831234 1831280 -1655122 + MIR SINE MIR 94 139 -69 * 281 304 30 37 chr11_random 1831271 1831406 -1654996 - MER5A DNA MER1_type -24 165 32 306 326 20 0 chr11_random 1831459 1831557 -1654845 - MER5A DNA MER1_type -84 105 6 1355 287 65 38 chr11_random 1832694 1833220 -1653182 + MLT1G1 LTR MaLR 31 570 -25 2132 121 0 0 chr11_random 1834235 1834541 -1651861 - AluSx SINE Alu -6 306 1 233 314 40 8 chr11_random 1835080 1835204 -1651198 + L1ME4a LINE L1 5990 6117 -4 218 313 54 27 chr11_random 1836715 1836827 -1649575 + MIR SINE MIR 5 119 -143 464 327 38 13 chr11_random 1838855 1839014 -1647388 + MIR SINE MIR 59 221 -41 283 285 187 8 chr11_random 1839052 1839175 -1647227 - MIR SINE MIR -79 183 39 190 293 0 17 chr11_random 1840618 1840676 -1645726 - L2 LINE L2 -1043 2271 2215 198 336 157 29 chr11_random 1841966 1842106 -1644296 + MIR SINE MIR 49 206 -56 259 271 0 0 chr11_random 1842189 1842248 -1644154 + L2 LINE L2 3251 3309 -4 26 30 0 0 chr11_random 1842964 1842997 -1643405 + AT_rich Low_complexity Low_complexity 1 33 0 240 259 65 37 chr11_random 1843114 1843222 -1643180 + MIR SINE MIR 92 202 -60 2506 161 23 9 chr11_random 1843224 1843303 -1643099 + L1MB1 LINE L1 5709 5785 -383 5784 179 55 17 chr11_random 1843303 1844489 -1641913 + Tigger3b DNA MER2_type 1 1231 0 2506 161 23 9 chr11_random 1844489 1844843 -1641559 + L1MB1 LINE L1 5785 6148 -20 218 316 25 25 chr11_random 1844935 1845014 -1641388 - L2 LINE L2 -47 3225 3147 27 49 0 0 chr11_random 1845371 1845412 -1640990 + AT_rich Low_complexity Low_complexity 1 41 0 357 345 94 49 chr11_random 1845755 1846228 -1640174 + L2 LINE L2 579 1106 -2208 1179 102 0 0 chr11_random 1846228 1846405 -1639997 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 357 345 94 49 chr11_random 1846405 1846748 -1639654 + L2 LINE L2 1106 1432 -1882 261 253 121 20 chr11_random 1846935 1847034 -1639368 - MIR SINE MIR -111 151 43 211 266 78 0 chr11_random 1847232 1847296 -1639106 + L3b LINE CR1 1404 1472 -111 276 322 120 17 chr11_random 1848706 1848939 -1637463 - MIR SINE MIR 0 262 6 1894 173 17 0 chr11_random 1849051 1849352 -1637050 - AluSx SINE Alu -6 306 1 6123 190 61 35 chr11_random 1849729 1850505 -1635897 + MER39-int LTR ERV1 4414 5168 -1163 2088 129 22 47 chr11_random 1850505 1850869 -1635533 - THE1A LTR MaLR 0 355 1 6123 190 61 35 chr11_random 1850869 1851196 -1635206 + MER39-int LTR ERV1 5168 5485 -846 3284 139 21 50 chr11_random 1851196 1851814 -1634588 - MER4A LTR ERV1 0 600 1 6123 190 61 35 chr11_random 1851814 1852273 -1634129 + MER39-int LTR ERV1 5485 6018 -313 488 231 0 0 chr11_random 1852270 1852361 -1634041 + MER39-int LTR ERV1 6077 6167 -164 * 299 272 78 10 chr11_random 1852465 1852568 -1633834 + MER39 LTR ERV1 3 112 -595 1008 194 105 23 chr11_random 1852583 1853044 -1633358 + LTR29 LTR ERV1 128 592 -3 199 310 0 28 chr11_random 1853107 1853178 -1633224 - L2 LINE L2 -4 3268 3200 1311 219 14 83 chr11_random 1853200 1853620 -1632782 + LTR9 LTR ERV1 1 391 -221 600 281 83 32 chr11_random 1853600 1853878 -1632524 + LTR19C LTR ERV1 488 779 0 * 212 322 113 28 chr11_random 1853898 1854075 -1632327 + MIR SINE MIR 48 239 -23 533 236 140 92 chr11_random 1854077 1854306 -1632096 - MLT1D LTR MaLR 0 505 228 1200 238 103 33 chr11_random 1854319 1854773 -1631629 - LTR29 LTR ERV1 -4 618 133 406 293 63 18 chr11_random 1854861 1855083 -1631319 - MLT1D LTR MaLR -272 233 2 230 295 26 0 chr11_random 1855603 1855681 -1630721 + CT-rich Low_complexity Low_complexity 1 80 0 4445 160 40 17 chr11_random 1855783 1855963 -1630439 - MER4D LTR ERV1 0 903 729 3496 117 45 4 chr11_random 1855963 1856495 -1629907 + MER41A LTR ERV1 1 554 0 4445 160 40 17 chr11_random 1856495 1857197 -1629205 - MER4D LTR ERV1 -174 729 1 34 24 0 0 chr11_random 1857564 1857605 -1628797 + AT_rich Low_complexity Low_complexity 1 41 0 2387 152 19 47 chr11_random 1857825 1858435 -1627967 - MER4B LTR ERV1 -1 778 1 343 283 42 8 chr11_random 1859067 1859187 -1627215 + (CATG)n Simple_repeat Simple_repeat 3 126 0 343 123 14 14 chr11_random 1859754 1859827 -1626575 + CT-rich Low_complexity Low_complexity 1 73 0 245 303 40 74 chr11_random 1859827 1860002 -1626400 - L2 LINE L2 -1 3271 3103 183 361 48 0 chr11_random 1860112 1860195 -1626207 - L2 LINE L2 0 3313 3227 516 179 78 197 chr11_random 1861930 1862265 -1624137 + MER51A LTR ERV1 328 622 -12 654 216 62 66 chr11_random 1862274 1862501 -1623901 + LTR34 LTR ERV1 121 346 -353 397 233 29 19 chr11_random 1862574 1862677 -1623725 + LTR34 LTR ERV1 590 693 -6 830 264 19 41 chr11_random 1862752 1863066 -1623336 - ERVL LTR ERVL -338 5426 5120 183 318 0 94 chr11_random 1864597 1864682 -1621720 - MER5B DNA MER1_type 0 178 102 211 231 0 19 chr11_random 1866992 1867044 -1619358 + MIR SINE MIR 24 74 -134 222 351 52 13 chr11_random 1867128 1867282 -1619120 - L2 LINE L2 -2 3311 3152 3214 108 48 24 chr11_random 1867306 1867686 -1618716 + Tigger3b DNA MER2_type 148 548 -2480 2268 114 3 0 chr11_random 1867686 1867985 -1618417 - AluSx SINE Alu -12 300 1 3214 108 48 24 chr11_random 1867985 1868185 -1618217 + Tigger3b DNA MER2_type 548 742 -489 504 270 16 0 chr11_random 1868232 1868358 -1618044 + Tigger3b DNA MER2_type 1103 1230 -1 264 290 11 75 chr11_random 1870364 1870398 -1616004 - MIR SINE MIR -118 144 109 545 237 151 27 chr11_random 1870398 1870584 -1615818 + MER3 DNA MER1_type 1 209 0 264 290 11 75 chr11_random 1870584 1870642 -1615760 - MIR SINE MIR -153 109 58 493 204 20 126 chr11_random 1871440 1871734 -1614668 - L1MC5 LINE L1 -866 7095 6833 567 206 178 11 chr11_random 1871735 1871915 -1614487 - MER21B LTR ERV1 -634 229 20 370 263 0 0 chr11_random 1871940 1872016 -1614386 - MER21B LTR ERV1 -776 87 12 350 65 0 0 chr11_random 1872259 1872305 -1614097 - MER107 DNA MER1_type -151 46 1 251 59 0 0 chr11_random 1872311 1872345 -1614057 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1872351 1872385 -1614017 - MER107 DNA MER1_type -163 34 1 233 88 0 0 chr11_random 1872391 1872425 -1613977 - MER107 DNA MER1_type -163 34 1 238 62 0 0 chr11_random 1872513 1872545 -1613857 - MER107 DNA MER1_type -165 32 1 234 103 26 0 chr11_random 1872584 1872623 -1613779 - MER107 DNA MER1_type -157 40 1 239 88 0 0 chr11_random 1872668 1872702 -1613700 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1872748 1872782 -1613620 - MER107 DNA MER1_type -163 34 1 238 62 0 0 chr11_random 1872790 1872822 -1613580 - MER107 DNA MER1_type -165 32 1 231 88 0 0 chr11_random 1872828 1872862 -1613540 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1872868 1872902 -1613500 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1872947 1872981 -1613421 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1873027 1873061 -1613341 - MER107 DNA MER1_type -163 34 1 233 88 0 0 chr11_random 1873067 1873101 -1613301 - MER107 DNA MER1_type -163 34 1 233 88 0 0 chr11_random 1873107 1873141 -1613261 - MER107 DNA MER1_type -163 34 1 231 88 0 0 chr11_random 1873267 1873301 -1613101 - MER107 DNA MER1_type -163 34 1 231 88 0 0 chr11_random 1873307 1873341 -1613061 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1873347 1873381 -1613021 - MER107 DNA MER1_type -163 34 1 250 31 0 0 chr11_random 1873429 1873461 -1612941 - MER107 DNA MER1_type -165 32 1 230 62 0 0 chr11_random 1873509 1873541 -1612861 - MER107 DNA MER1_type -165 32 1 251 59 0 0 chr11_random 1873547 1873581 -1612821 - MER107 DNA MER1_type -163 34 1 233 88 0 0 chr11_random 1873587 1873621 -1612781 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1873746 1873780 -1612622 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1873786 1873820 -1612582 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1873826 1873860 -1612542 - MER107 DNA MER1_type -163 34 1 257 59 0 0 chr11_random 1873865 1873899 -1612503 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1873945 1873979 -1612423 - MER107 DNA MER1_type -163 34 1 231 88 0 0 chr11_random 1873985 1874019 -1612383 - MER107 DNA MER1_type -163 34 1 231 88 0 0 chr11_random 1874025 1874059 -1612343 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874185 1874219 -1612183 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874265 1874299 -1612103 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874305 1874339 -1612063 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874385 1874419 -1611983 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1874425 1874459 -1611943 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874465 1874499 -1611903 - MER107 DNA MER1_type -163 34 1 230 62 0 0 chr11_random 1874507 1874539 -1611863 - MER107 DNA MER1_type -165 32 1 231 88 0 0 chr11_random 1874545 1874579 -1611823 - MER107 DNA MER1_type -163 34 1 231 88 0 0 chr11_random 1874585 1874619 -1611783 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874625 1874659 -1611743 - MER107 DNA MER1_type -163 34 1 251 59 0 0 chr11_random 1874665 1874699 -1611703 - MER107 DNA MER1_type -163 34 1 233 88 0 0 chr11_random 1874705 1874739 -1611663 - MER107 DNA MER1_type -163 34 1 239 88 0 0 chr11_random 1874745 1874779 -1611623 - MER107 DNA MER1_type -163 34 1 227 118 0 0 chr11_random 1874784 1874818 -1611584 - MER107 DNA MER1_type -163 34 1 1971 155 128 5 chr11_random 1874875 1875250 -1611152 - MSTA LTR MaLR -7 421 1 1292 212 19 39 chr11_random 1875899 1876210 -1610192 - L1MB1 LINE L1 -1 6167 5863 197 284 74 97 chr11_random 1876217 1876278 -1610124 + MIR SINE MIR 53 114 -148 646 23 35 0 chr11_random 1876278 1876365 -1610037 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 197 284 74 97 chr11_random 1876365 1876385 -1610017 + MIR SINE MIR 114 133 -129 1509 111 0 0 chr11_random 1876385 1876584 -1609818 - AluY SINE Alu -74 237 39 197 284 74 97 chr11_random 1876584 1876677 -1609725 + MIR SINE MIR 133 224 -38 403 292 136 39 chr11_random 1877763 1878146 -1608256 + L2 LINE L2 560 979 -2335 224 278 93 56 chr11_random 1882057 1882165 -1604237 + L2 LINE L2 1314 1425 -1889 1786 201 37 65 chr11_random 1882289 1882752 -1603650 + L1MC3 LINE L1 6405 6854 -931 577 211 0 12 chr11_random 1882763 1883102 -1603300 + (CA)n Simple_repeat Simple_repeat 1 334 0 1677 262 114 12 chr11_random 1883102 1883241 -1603161 + L1MC3 LINE L1 6862 6985 -800 186 43 0 0 chr11_random 1883241 1883264 -1603138 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 1677 262 114 12 chr11_random 1883264 1883762 -1602640 + L1MC3 LINE L1 6985 7564 -221 869 188 6 18 chr11_random 1883787 1883952 -1602450 + FRAM SINE Alu 4 166 0 2205 151 25 63 chr11_random 1885272 1885715 -1600687 - MSTB LTR MaLR 0 426 1 331 266 18 55 chr11_random 1886635 1886744 -1599658 + MIR SINE MIR 87 191 -71 1045 252 241 8 chr11_random 1887216 1887693 -1598709 + Charlie1 DNA MER1_type 1423 2010 -751 424 340 86 45 chr11_random 1888944 1889622 -1596780 + L1MCb LINE L1 877 1643 -4869 442 181 4 0 chr11_random 1890402 1890494 -1595908 + L1MA4 LINE L1 6162 6260 -45 472 306 165 21 chr11_random 1890593 1890922 -1595480 + L1MCb LINE L1 1645 2124 -4440 31 58 0 0 chr11_random 1890926 1890978 -1595424 + AT_rich Low_complexity Low_complexity 1 52 0 405 285 43 89 chr11_random 1891205 1891745 -1594657 + L1MCb LINE L1 3533 4047 -2517 210 322 133 14 chr11_random 1892586 1892729 -1593673 - L2 LINE L2 -2 3311 3152 183 364 0 0 chr11_random 1892921 1892987 -1593415 - L2 LINE L2 0 3272 3207 280 287 74 41 chr11_random 1893728 1893850 -1592552 + MIR SINE MIR 66 191 -71 195 184 0 0 chr11_random 1894763 1894801 -1591601 + (CAT)n Simple_repeat Simple_repeat 3 40 0 273 319 53 0 chr11_random 1895314 1895427 -1590975 + MER5A DNA MER1_type 8 126 -63 335 320 136 7 chr11_random 1896156 1896303 -1590099 - MER5B DNA MER1_type 0 178 13 354 268 197 53 chr11_random 1897336 1897564 -1588838 + MIR SINE MIR 2 262 0 467 185 54 46 chr11_random 1897819 1897949 -1588453 - MLT1D LTR MaLR -374 131 1 648 272 73 45 chr11_random 1897971 1898217 -1588185 - MIR SINE MIR -7 255 3 763 335 110 33 chr11_random 1898715 1899386 -1587016 - L2 LINE L2 -511 2803 2081 291 357 0 0 chr11_random 1900738 1900844 -1585558 - MIR SINE MIR -65 143 38 1736 139 7 4 chr11_random 1901519 1901845 -1584557 - AluSx SINE Alu 0 327 1 1306 152 25 0 chr11_random 1904128 1904365 -1582037 + L1MA7 LINE L1 6049 6291 0 2198 98 0 0 chr11_random 1904901 1905198 -1581204 - AluSc SINE Alu -12 297 1 254 217 36 48 chr11_random 1905879 1905962 -1580440 + MIR SINE MIR 154 235 -27 254 50 25 0 chr11_random 1906379 1906419 -1579983 + (CA)n Simple_repeat Simple_repeat 2 42 0 267 114 0 0 chr11_random 1906887 1906931 -1579471 + (CA)n Simple_repeat Simple_repeat 2 45 0 245 271 115 57 chr11_random 1906946 1907068 -1579334 - L2 LINE L2 -5 3267 3139 206 308 15 0 chr11_random 1907118 1907183 -1579219 + MIR SINE MIR 84 149 -113 216 404 0 35 chr11_random 1908433 1908574 -1577828 + MIR SINE MIR 53 188 -74 351 238 48 48 chr11_random 1908745 1908871 -1577531 - L2 LINE L2 -8 3264 3139 533 347 34 4 chr11_random 1909147 1909412 -1576990 + L1ME LINE L1 92 364 -6032 551 297 142 29 chr11_random 1909718 1910790 -1575612 + L1ME LINE L1 707 1899 -4497 3305 273 40 28 chr11_random 1910794 1912959 -1573443 + L1ME LINE L1 2041 3263 -2952 2151 94 27 7 chr11_random 1912959 1913258 -1573144 + AluSq SINE Alu 1 305 -8 3305 273 40 28 chr11_random 1913258 1913639 -1572763 + L1ME LINE L1 3263 3638 -2577 367 320 73 73 chr11_random 1914209 1914512 -1571890 - L1ME3A LINE L1 -104 6066 5764 1416 173 94 44 chr11_random 1914571 1914889 -1571513 - MER44D DNA MER2_type -5 604 1 290 328 8 15 chr11_random 1915306 1915440 -1570962 + L1ME LINE L1 5605 5737 -502 661 333 67 17 chr11_random 1915894 1916028 -1570374 - LTR16A1 LTR ERVL -1 456 330 1887 149 37 69 chr11_random 1916028 1916404 -1569998 - THE1B LTR MaLR 0 364 1 11677 94 14 0 chr11_random 1916404 1917963 -1568439 - THE1B-int LTR MaLR 0 1580 1 2283 121 33 33 chr11_random 1917963 1918327 -1568075 - THE1B LTR MaLR 0 364 1 661 333 67 17 chr11_random 1918327 1918535 -1567867 - LTR16A1 LTR ERVL -126 331 95 545 259 44 123 chr11_random 1919516 1919995 -1566407 + L1M4 LINE L1 4620 5060 -1086 2399 60 7 0 chr11_random 1921618 1921919 -1564483 + AluY SINE Alu 1 303 -8 2205 77 3 20 chr11_random 1922544 1922843 -1563559 + AluY SINE Alu 1 294 -17 322 306 71 12 chr11_random 1923467 1923637 -1562765 + L1M4 LINE L1 3013 3192 -2954 241 314 49 63 chr11_random 1923793 1923947 -1562455 + L1M4 LINE L1 3390 3545 -2601 1844 150 17 0 chr11_random 1923947 1924247 -1562155 - AluSx SINE Alu -7 305 1 241 314 49 63 chr11_random 1924247 1924458 -1561944 + L1M4 LINE L1 3545 3750 -2396 586 304 8 59 chr11_random 1924691 1924870 -1561532 + MIR SINE MIR 23 187 -75 2121 132 59 6 chr11_random 1924870 1925226 -1561176 + L1PA13 LINE L1 5783 6157 -6 586 304 8 59 chr11_random 1925226 1925299 -1561103 + MIR SINE MIR 187 262 0 1072 223 98 42 chr11_random 1926419 1926755 -1559647 - MLT1A1 LTR MaLR 0 365 11 233 122 49 0 chr11_random 1926829 1926870 -1559532 - MLT2A1 LTR ERVL 0 444 402 2001 130 3 0 chr11_random 1927228 1927528 -1558874 - AluSx SINE Alu -11 301 1 1658 205 52 62 chr11_random 1927659 1928156 -1558246 + MLT1D LTR MaLR 1 492 -13 333 349 0 0 chr11_random 1929627 1929736 -1556666 + (CA)n Simple_repeat Simple_repeat 2 110 0 1740 253 35 6 chr11_random 1931391 1931901 -1554501 - LTR45 LTR ERV1 0 525 1 369 352 69 23 chr11_random 1933340 1933644 -1552758 + HERVL LTR ERVL 3691 4008 -1646 361 318 8 16 chr11_random 1933717 1933843 -1552559 + HERVL LTR ERVL 4165 4289 -1475 431 363 41 0 chr11_random 1935497 1935668 -1550734 + MER5B DNA MER1_type 1 178 0 1569 165 112 22 chr11_random 1935960 1936281 -1550121 - L1M2 LINE L1 -511 5780 5431 306 0 0 0 chr11_random 1936281 1936315 -1550087 + (CA)n Simple_repeat Simple_repeat 2 35 0 1219 158 41 0 chr11_random 1936315 1936536 -1549866 + L1MA9 LINE L1 5795 6024 -288 275 127 48 0 chr11_random 1936532 1936595 -1549807 + L1MA9 LINE L1 5959 6024 -288 * 502 217 103 50 chr11_random 1936651 1936954 -1549448 + L1MA9 LINE L1 5959 6293 -19 237 250 56 0 chr11_random 1938581 1938653 -1547749 - MIR SINE MIR -65 143 68 527 218 38 38 chr11_random 1940624 1940757 -1545645 + MER93b LTR ERV1 1 133 -240 1402 197 13 13 chr11_random 1940927 1941226 -1545176 + AluJo SINE Alu 1 299 -13 3950 210 72 13 chr11_random 1941227 1942993 -1543409 - L1MB7 LINE L1 -60 6124 4257 * 5673 194 32 4 chr11_random 1942989 1944321 -1542081 - L1MC1 LINE L1 0 6333 4936 351 0 0 0 chr11_random 1944321 1944360 -1542042 + (TG)n Simple_repeat Simple_repeat 2 40 0 5673 194 32 4 chr11_random 1944360 1944815 -1541587 - L1MC1 LINE L1 -1397 4936 4495 1823 137 7 7 chr11_random 1945018 1945289 -1541113 + AluSg SINE Alu 23 293 -17 280 246 194 20 chr11_random 1945290 1945460 -1540942 + L1MEc LINE L1 1853 1992 -4404 279 54 0 0 chr11_random 1945460 1945497 -1540905 + (TG)n Simple_repeat Simple_repeat 2 38 0 280 246 194 20 chr11_random 1945497 1945574 -1540828 + L1MEc LINE L1 1992 2143 -4253 304 260 40 10 chr11_random 1945617 1945717 -1540685 + L1MCc LINE L1 51 153 -6270 240 247 13 39 chr11_random 1945882 1945959 -1540443 + L1MCc LINE L1 677 751 -5671 1574 294 64 15 chr11_random 1946546 1947382 -1539020 + L1MCc LINE L1 1150 1944 -4997 2207 168 28 19 chr11_random 1947382 1947810 -1538592 - MSTB1 LTR MaLR 0 432 1 1574 294 64 15 chr11_random 1947810 1948700 -1537702 + L1MCc LINE L1 1944 4628 -2313 1039 258 104 73 chr11_random 1948700 1949332 -1537070 + MER21B LTR ERV1 1 652 -211 800 227 141 44 chr11_random 1949368 1949822 -1536580 + L1MCc LINE L1 4627 5124 -1817 * 2676 196 44 152 chr11_random 1949821 1950214 -1536188 + L1MC3 LINE L1 6707 7141 -644 292 279 19 19 chr11_random 1950214 1950318 -1536084 + MLT1F1 LTR MaLR 25 128 -439 2676 196 44 152 chr11_random 1950318 1951022 -1535380 + L1MC3 LINE L1 7141 7778 -7 1178 202 53 133 chr11_random 1951042 1951874 -1534528 + L1MCc LINE L1 5111 5875 -1066 399 41 0 0 chr11_random 1952220 1952269 -1534133 + (TG)n Simple_repeat Simple_repeat 2 50 0 318 297 45 9 chr11_random 1954708 1954819 -1531583 - MIR SINE MIR -67 195 81 1903 251 57 25 chr11_random 1957589 1958238 -1528164 + L1MC3 LINE L1 7108 7777 -8 658 180 42 36 chr11_random 1958238 1958405 -1527997 + MER53 DNA DNA 21 188 -1 3686 165 66 57 chr11_random 1959162 1960021 -1526381 - L1MA8 LINE L1 -171 6120 5254 999 237 21 85 chr11_random 1960020 1960405 -1525997 + L1 LINE L1 4775 5085 -1061 * 1277 161 41 0 chr11_random 1960405 1960647 -1525755 + L1MA9 LINE L1 6061 6312 0 999 237 21 85 chr11_random 1960647 1960800 -1525602 + L1 LINE L1 5085 5246 -900 1752 107 17 0 chr11_random 1963501 1963735 -1522667 + AluSq SINE Alu 1 238 -75 974 249 115 14 chr11_random 1965415 1965805 -1520597 - L1ME2 LINE L1 -69 6095 5671 454 214 39 52 chr11_random 1965939 1966093 -1520309 + L1MC4 LINE L1 6797 6948 -1094 235 283 51 36 chr11_random 1966129 1966267 -1520135 + L1MC4 LINE L1 6934 7073 -969 2177 153 7 32 chr11_random 1966428 1966833 -1519569 + L1MA4 LINE L1 5900 6294 -6 316 300 38 86 chr11_random 1967240 1967553 -1518849 + L1MC4a LINE L1 7431 7728 -80 379 220 9 151 chr11_random 1967581 1967813 -1518589 + L1MC5 LINE L1 7713 7911 -50 638 176 9 0 chr11_random 1968139 1968247 -1518155 + LTR26B LTR ERV1 1 109 -422 258 152 136 15 chr11_random 1968284 1968350 -1518052 - L1MC5 LINE L1 -181 7780 7707 312 196 10 41 chr11_random 1968603 1968700 -1517702 - L1MC5 LINE L1 -259 7702 7609 2519 46 13 19 chr11_random 1968711 1969018 -1517384 - AluY SINE Alu -6 305 1 1608 226 51 124 chr11_random 1969058 1969959 -1516443 - L1MC5 LINE L1 -491 7470 6636 194 338 25 0 chr11_random 1971732 1971812 -1514590 + MIR SINE MIR 109 190 -72 283 278 126 20 chr11_random 1973836 1973987 -1512415 - MIR SINE MIR -13 249 83 307 325 34 0 chr11_random 1974658 1974775 -1511627 - MIR3 SINE MIR -6 202 82 326 284 11 0 chr11_random 1976399 1976494 -1509908 - MER5A DNA MER1_type -84 105 10 430 180 0 41 chr11_random 1976565 1976687 -1509715 + GA-rich Low_complexity Low_complexity 3 119 0 269 304 10 10 chr11_random 1976687 1976789 -1509613 - MIR SINE MIR -6 256 155 180 386 14 0 chr11_random 1976823 1976893 -1509509 - MIR SINE MIR -179 83 13 934 164 12 0 chr11_random 1977645 1977816 -1508586 - L1MB4 LINE L1 -2 6414 6242 1347 149 35 4 chr11_random 1977817 1978253 -1508149 + LTR54 LTR ERV1 1 510 0 7199 220 55 104 chr11_random 1978275 1980436 -1505966 - L1MB4 LINE L1 -161 6255 3990 1022 213 109 55 chr11_random 1980436 1980840 -1505562 - MSTB LTR MaLR 0 426 1 7199 220 55 104 chr11_random 1980840 1981569 -1504833 - L1MB4 LINE L1 -2426 3990 3227 189 0 0 0 chr11_random 1981569 1981590 -1504812 + (TCTA)n Simple_repeat Simple_repeat 2 22 0 * 218 57 57 0 chr11_random 1981589 1981624 -1504778 + (TATG)n Simple_repeat Simple_repeat 2 38 0 7199 220 55 104 chr11_random 1981590 1981650 -1504752 - L1MB4 LINE L1 -3189 3227 3166 809 196 72 75 chr11_random 1981650 1981915 -1504487 + MLT1B LTR MaLR 127 390 0 7199 220 55 104 chr11_random 1981915 1982193 -1504209 - L1MB4 LINE L1 -3250 3166 2876 303 29 0 0 chr11_random 1982193 1982227 -1504175 + U2 snRNA snRNA 1 34 -154 7199 220 55 104 chr11_random 1982227 1982700 -1503702 - L1MB4 LINE L1 -3540 2876 2381 741 161 0 8 chr11_random 1982700 1982824 -1503578 - FLAM_C SINE Alu -8 125 3 7199 220 55 104 chr11_random 1982824 1983679 -1502723 - L1MB4 LINE L1 -4035 2381 1652 764 174 0 16 chr11_random 1983681 1983990 -1502412 + CT-rich Low_complexity Low_complexity 1 303 0 1154 242 76 90 chr11_random 1984133 1984712 -1501690 - L1MB4 LINE L1 -4764 1620 1050 441 0 0 0 chr11_random 1984722 1984771 -1501631 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1763 187 0 10 chr11_random 1984771 1985059 -1501343 - AluJo SINE Alu -25 287 1 5788 166 32 33 chr11_random 1985099 1987126 -1499276 - L1MA4A LINE L1 -6 7716 5692 5764 192 46 30 chr11_random 1987100 1988757 -1497645 - L1MA4A LINE L1 -3637 3928 2248 * 205 276 142 71 chr11_random 1990854 1990981 -1495421 + MIR3 SINE MIR 11 146 -62 385 279 153 44 chr11_random 1991566 1991971 -1494431 - LTR50 LTR ERVL -152 643 195 2036 140 7 10 chr11_random 1992535 1992843 -1493559 - AluSx SINE Alu -3 309 3 180 0 0 0 chr11_random 1992860 1992880 -1493522 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2035 255 75 21 chr11_random 1993005 1993668 -1492734 - L1MC4a LINE L1 0 7808 7110 240 59 0 0 chr11_random 1993768 1993802 -1492600 + (TC)n Simple_repeat Simple_repeat 1 34 0 346 265 94 53 chr11_random 1994025 1994270 -1492132 - L1MCc LINE L1 -6107 316 62 999 256 130 47 chr11_random 1994313 1994759 -1491643 - MLT1D LTR MaLR 0 505 23 697 285 67 51 chr11_random 1994987 1995377 -1491025 + L2 LINE L2 2910 3305 -8 2544 279 64 27 chr11_random 1995701 1997198 -1489204 - L1MEc LINE L1 -2464 3751 2200 2275 119 0 0 chr11_random 1997490 1997801 -1488601 + AluY SINE Alu 1 311 0 282 95 0 0 chr11_random 2000204 2000246 -1486156 + (TC)n Simple_repeat Simple_repeat 2 43 0 * 292 184 37 22 chr11_random 2000245 2000381 -1486021 + (TA)n Simple_repeat Simple_repeat 1 138 0 414 289 156 14 chr11_random 2000412 2000772 -1485630 + L1ME4a LINE L1 5512 5922 -199 1812 171 0 10 chr11_random 2000806 2001099 -1485303 - AluJo SINE Alu -22 290 1 1696 152 19 10 chr11_random 2001110 2001419 -1484983 - AluSx SINE Alu 0 312 1 266 299 15 22 chr11_random 2002244 2002378 -1484024 + (CATATA)n Simple_repeat Simple_repeat 2 134 0 506 271 129 13 chr11_random 2002494 2002719 -1483683 + MIR SINE MIR 2 252 -10 2163 134 6 13 chr11_random 2003758 2004071 -1482331 + AluSx SINE Alu 1 311 -1 350 250 39 10 chr11_random 2004161 2004265 -1482137 - L1MEc LINE L1 -4327 2069 1963 714 278 48 8 chr11_random 2004294 2004542 -1481860 - L1MEc LINE L1 -4578 1818 1561 375 200 12 0 chr11_random 2004549 2004629 -1481773 + L1MC2 LINE L1 5979 6059 -285 395 195 0 26 chr11_random 2004631 2004708 -1481694 + Tigger2 DNA MER2_type 3 77 -2641 420 325 18 6 chr11_random 2004736 2004902 -1481500 - MER8 DNA MER2_type -62 177 10 1212 210 40 7 chr11_random 2004906 2005178 -1481224 + L1MC2 LINE L1 6062 6342 -2 782 224 50 41 chr11_random 2006258 2006477 -1479925 - MLT1D LTR MaLR -284 221 1 415 159 70 3 chr11_random 2006491 2006611 -1479791 + L1ME1 LINE L1 5732 5860 -334 2283 257 100 48 chr11_random 2007610 2008978 -1477424 + L1MD2 LINE L1 3305 4743 -1403 1229 170 42 0 chr11_random 2008984 2009196 -1477206 + Tigger5 DNA MER2_type 1 221 -2102 2235 194 77 9 chr11_random 2009202 2009656 -1476746 + Tigger5 DNA MER2_type 1838 2322 -1 2762 250 118 9 chr11_random 2009660 2011089 -1475313 + L1MD2 LINE L1 4751 6336 -23 361 325 6 19 chr11_random 2011865 2012025 -1474377 + CT-rich Low_complexity Low_complexity 2 159 0 192 40 0 0 chr11_random 2013548 2013573 -1472829 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 421 156 21 0 chr11_random 2013582 2013678 -1472724 + (TA)n Simple_repeat Simple_repeat 2 99 0 192 40 0 0 chr11_random 2013678 2013703 -1472699 + (GA)n Simple_repeat Simple_repeat 2 26 0 637 167 0 9 chr11_random 2013703 2013811 -1472591 - AluJb SINE Alu -34 278 172 318 285 62 122 chr11_random 2013811 2014310 -1472092 - L2 LINE L2 -600 2714 2246 2061 114 3 10 chr11_random 2015077 2015366 -1471036 + AluSc SINE Alu 1 287 -22 255 359 24 18 chr11_random 2015942 2016112 -1470290 - MER5B DNA MER1_type 0 178 8 254 259 19 74 chr11_random 2016174 2016282 -1470120 + MER5B DNA MER1_type 65 166 -12 1244 212 13 0 chr11_random 2016983 2017219 -1469183 - Tigger3(Golem) DNA MER2_type -1 3028 2790 1106 92 0 14 chr11_random 2017226 2017368 -1469034 + AluSq/x SINE Alu 1 140 -173 527 130 0 0 chr11_random 2018187 2018264 -1468138 + AluS SINE Alu 2 78 -235 833 182 10 0 chr11_random 2019110 2019319 -1467083 + (CATA)n Simple_repeat Simple_repeat 1 210 0 241 176 0 0 chr11_random 2019319 2019370 -1467032 - L1MC4 LINE L1 -1339 6703 6653 547 180 31 0 chr11_random 2019373 2019501 -1466901 + (CATATA)n Simple_repeat Simple_repeat 6 137 0 27 62 0 0 chr11_random 2019505 2019553 -1466849 + AT_rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr11_random 2020247 2020269 -1466133 + AT_rich Low_complexity Low_complexity 1 22 0 214 250 59 0 chr11_random 2020525 2020591 -1465811 - MIR SINE MIR -75 187 118 428 234 65 43 chr11_random 2020591 2020775 -1465627 + MIR SINE MIR 2 189 -73 739 44 0 0 chr11_random 2021215 2021306 -1465096 + MLT2A1 LTR ERVL 1 91 -353 305 48 24 0 chr11_random 2021304 2021346 -1465056 + MLT2A1 LTR ERVL 49 91 -353 * 257 105 0 0 chr11_random 2021344 2021382 -1465020 + MLT2A1 LTR ERVL 49 86 -367 * 1564 141 20 26 chr11_random 2021376 2021682 -1464720 + MLT2A1 LTR ERVL 44 347 -97 1381 240 48 24 chr11_random 2021816 2022237 -1464165 - L1M4 LINE L1 -1617 4529 4099 1599 195 14 20 chr11_random 2022241 2022538 -1463864 + AluJo SINE Alu 5 299 -13 422 155 63 21 chr11_random 2022549 2022691 -1463711 + GA-rich Low_complexity Low_complexity 3 150 0 4009 226 48 11 chr11_random 2022703 2023810 -1462592 - L1M4 LINE L1 -2079 4067 2920 1994 159 0 7 chr11_random 2023952 2024254 -1462148 - AluSx SINE Alu -12 300 1 305 324 62 23 chr11_random 2024496 2024672 -1461730 - LTR33 LTR ERVL -2 519 337 843 206 0 0 chr11_random 2025045 2025225 -1461177 + (CA)n Simple_repeat Simple_repeat 1 180 0 248 312 43 0 chr11_random 2025455 2025548 -1460854 - L1MEc LINE L1 -6047 349 253 293 313 10 0 chr11_random 2026287 2026383 -1460019 - L2 LINE L2 -16 3256 3160 1847 106 106 0 chr11_random 2028209 2028473 -1457929 + AluSg SINE Alu 1 292 -18 21 0 0 0 chr11_random 2030278 2030299 -1456103 + AT_rich Low_complexity Low_complexity 1 21 0 188 317 48 10 chr11_random 2030302 2030406 -1455996 + MIR SINE MIR 45 152 -56 2166 208 38 22 chr11_random 2030504 2031000 -1455402 + MLT2B3 LTR ERVL 5 508 -46 1695 143 18 11 chr11_random 2031021 2031329 -1455073 - AluY SINE Alu 0 312 3 256 257 0 29 chr11_random 2033077 2033147 -1453255 + L2 LINE L2 3199 3266 -6 1748 142 23 19 chr11_random 2033222 2033566 -1452836 - MER4A LTR ERV1 0 664 261 490 165 77 0 chr11_random 2033566 2033657 -1452745 - MER4A LTR ERV1 -566 98 1 2266 104 7 0 chr11_random 2035605 2035893 -1450509 - AluSp SINE Alu -21 292 3 398 301 116 57 chr11_random 2036243 2036732 -1449670 - L2 LINE L2 -15 3298 2772 533 225 67 0 chr11_random 2037814 2037934 -1448468 - MER20 DNA MER1_type -2 217 90 1197 196 54 24 chr11_random 2038073 2038410 -1447992 + MER54B LTR ERVL 539 793 0 2173 116 3 0 chr11_random 2838981 2839273 -647129 + AluSq SINE Alu 1 293 -20 1075 163 6 0 chr11_random 2839295 2839467 -646935 + AluSg/x SINE Alu 137 309 -3 1769 123 24 58 chr11_random 2839523 2839841 -646561 + AluSx SINE Alu 1 308 0 1031 260 92 39 chr11_random 2839933 2840468 -645934 + L1M4 LINE L1 4381 4951 -1195 2276 116 0 0 chr11_random 2840468 2840769 -645633 + AluSg SINE Alu 1 301 -9 1031 260 92 39 chr11_random 2840769 2840822 -645580 + L1M4 LINE L1 4951 5000 -1146 433 164 30 0 chr11_random 2840970 2841037 -645365 + AluJ/FRAM SINE Alu 220 288 -24 1510 191 27 13 chr11_random 2841598 2841896 -644506 + AluJb SINE Alu 1 302 -10 1509 133 141 8 chr11_random 2842153 2842409 -643993 - AluSg1 SINE Alu -19 290 1 1888 126 42 3 chr11_random 2843651 2843937 -642465 + AluSc SINE Alu 1 297 -12 2289 95 0 7 chr11_random 2843948 2844244 -642158 + AluSc SINE Alu 1 294 -15 415 188 0 0 chr11_random 2844244 2844313 -642089 - AluJb SINE Alu -182 130 62 829 227 0 70 chr11_random 2844382 2844611 -641791 + AluJo SINE Alu 6 218 -94 374 326 43 35 chr11_random 2844748 2844910 -641492 - L1ME4a LINE L1 -237 5884 5718 2262 85 7 23 chr11_random 2844910 2845215 -641187 + AluY SINE Alu 1 300 -11 374 326 43 35 chr11_random 2845215 2845282 -641120 - L1ME4a LINE L1 -403 5718 5653 378 0 0 0 chr11_random 2845602 2845644 -640758 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1851 135 0 4 chr11_random 2845661 2845928 -640474 - AluSq SINE Alu -47 266 1 1470 158 19 101 chr11_random 2846214 2846375 -640027 - AluJo SINE Alu -22 290 117 2451 69 7 0 chr11_random 2846375 2846681 -639721 - AluY SINE Alu -3 308 1 1861 146 10 17 chr11_random 2846691 2846979 -639423 - AluSx SINE Alu -26 286 1 1470 158 19 101 chr11_random 2846979 2847122 -639280 - AluJo SINE Alu -204 108 1 224 262 167 32 chr11_random 2848230 2848356 -638046 - MIR SINE MIR -6 256 114 2006 142 7 0 chr11_random 2848365 2848661 -637741 - AluSx SINE Alu -14 298 1 460 197 188 26 chr11_random 2848666 2848783 -637619 - AluSq/x SINE Alu -176 137 2 359 309 66 11 chr11_random 2848784 2848964 -637438 - MIR SINE MIR -15 247 51 2357 82 0 20 chr11_random 2849258 2849561 -636841 - AluY SINE Alu -14 297 1 23 33 0 0 chr11_random 2849580 2849610 -636792 + AT_rich Low_complexity Low_complexity 1 30 0 1673 152 20 37 chr11_random 2849642 2849938 -636464 + AluJo SINE Alu 1 291 -21 274 260 26 0 chr11_random 2850010 2850128 -636274 - L1ME LINE L1 -5948 122 2 408 20 0 0 chr11_random 2850231 2850280 -636122 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 776 128 0 8 chr11_random 2850305 2850422 -635980 - AluJb SINE Alu -195 117 2 1682 178 18 7 chr11_random 2850492 2850778 -635624 - AluSx SINE Alu -21 291 3 614 204 0 0 chr11_random 2850913 2851021 -635381 - AluJb SINE Alu -14 298 191 2332 89 0 7 chr11_random 2851159 2851462 -634940 - AluY SINE Alu -10 301 1 530 247 28 11 chr11_random 2851466 2851644 -634758 - L1M4 LINE L1 -3537 2609 2429 3779 121 4 4 chr11_random 2852004 2852515 -633887 - MER9 LTR ERVK 0 511 1 240 48 0 0 chr11_random 2852532 2852574 -633828 - LTR66 LTR ERVL -171 439 398 204 97 0 0 chr11_random 2852576 2852607 -633795 + (CA)n Simple_repeat Simple_repeat 2 32 0 3379 237 107 42 chr11_random 2852654 2853782 -632620 - L1MC4 LINE L1 -106 7702 6528 2053 131 17 0 chr11_random 2853782 2854080 -632322 - AluSx SINE Alu -9 303 1 3379 237 107 42 chr11_random 2854080 2854541 -631861 - L1MC4 LINE L1 -1280 6528 6098 1996 142 7 0 chr11_random 2854699 2855002 -631400 - AluSg1 SINE Alu -4 305 1 262 213 180 0 chr11_random 2855160 2855221 -631181 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 180 0 0 0 chr11_random 2857025 2857045 -629357 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 22 35 0 0 chr11_random 2857100 2857129 -629273 + AT_rich Low_complexity Low_complexity 1 29 0 258 182 61 15 chr11_random 2857330 2857396 -629006 - MSTD LTR MaLR -5 391 323 705 153 0 0 chr11_random 2857396 2857520 -628882 + CT-rich Low_complexity Low_complexity 3 126 0 1647 158 0 26 chr11_random 2857675 2857948 -628454 - AluJb SINE Alu -23 289 24 42238 65 2 5 chr11_random 2858133 2863531 -622871 + L1P LINE L1 7 5390 -756 237 268 82 21 chr11_random 2863631 2863728 -622674 - L2 LINE L2 -617 2697 2595 1697 187 7 0 chr11_random 2863730 2864024 -622378 + AluJb SINE Alu 1 296 -16 3275 125 32 0 chr11_random 2864278 2864749 -621653 - MER1A DNA MER1_type 0 529 44 347 201 7 117 chr11_random 2865050 2865204 -621198 - LTR41 LTR ERVL -1 772 636 1352 214 6 45 chr11_random 2865204 2865348 -621054 + AluJo SINE Alu 2 150 -162 238 25 25 25 chr11_random 2865348 2865388 -621014 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 1352 214 6 45 chr11_random 2865388 2865556 -620846 + AluJo SINE Alu 150 302 -10 2258 99 3 7 chr11_random 2865857 2866161 -620241 + AluSq SINE Alu 1 303 -10 444 254 138 22 chr11_random 2866170 2866308 -620094 - MIR SINE MIR -86 176 23 27 0 0 0 chr11_random 2867572 2867599 -618803 + AT_rich Low_complexity Low_complexity 1 27 0 2161 140 0 0 chr11_random 2868116 2868423 -617979 + AluSq SINE Alu 1 307 -6 2017 129 0 3 chr11_random 2868772 2869082 -617320 - AluSx SINE Alu 0 312 1 1653 131 67 35 chr11_random 2869478 2869760 -616642 - AluY SINE Alu -20 291 1 339 278 79 24 chr11_random 2870072 2870198 -616204 - MER117 DNA MER1_type -41 156 24 233 309 24 36 chr11_random 2870252 2870336 -616066 - MIR SINE MIR -59 149 67 1928 157 0 3 chr11_random 2871231 2871524 -614878 + AluSx SINE Alu 1 292 -20 1939 138 3 0 chr11_random 2871631 2871927 -614475 + AluSg SINE Alu 1 297 -13 2124 86 0 4 chr11_random 2872015 2872294 -614108 + AluY SINE Alu 22 299 -12 1922 171 0 0 chr11_random 2872470 2872768 -613634 - AluSx SINE Alu -10 302 5 1210 154 10 10 chr11_random 2872813 2873014 -613388 - AluSg/x SINE Alu -16 296 96 48 88 0 0 chr11_random 2873130 2873255 -613147 + AT_rich Low_complexity Low_complexity 1 125 0 251 35 0 0 chr11_random 2873361 2873390 -613012 + AluJo SINE Alu 13 41 -258 1945 142 17 3 chr11_random 2873394 2873696 -612706 - AluSx SINE Alu -5 307 2 1455 195 15 7 chr11_random 2873696 2873968 -612434 + AluJo SINE Alu 27 300 -12 440 280 84 58 chr11_random 2874376 2874687 -611715 + L2 LINE L2 2286 2604 -710 2057 154 17 0 chr11_random 2874784 2875083 -611319 - AluSg SINE Alu -6 304 1 703 276 103 63 chr11_random 2875120 2875199 -611203 + L2 LINE L2 2649 2723 -590 1182 208 18 5 chr11_random 2875199 2875420 -610982 - MER58A DNA MER1_type 0 224 1 703 276 103 63 chr11_random 2875420 2875956 -610446 + L2 LINE L2 2723 3308 -5 590 228 31 24 chr11_random 2876022 2876149 -610253 + AluJb SINE Alu 121 248 -64 1047 209 5 9 chr11_random 2876151 2876366 -610036 + AluJo SINE Alu 85 298 -14 1834 174 3 25 chr11_random 2876369 2876685 -609717 + AluSx SINE Alu 1 309 -3 213 263 93 51 chr11_random 2876690 2876808 -609594 + L2 LINE L2 2707 2829 -485 2168 134 3 0 chr11_random 2877034 2877339 -609063 - AluSg SINE Alu -4 306 1 693 212 35 153 chr11_random 2878531 2878936 -607466 + L1MC4 LINE L1 6717 7073 -888 289 206 98 22 chr11_random 2878958 2879050 -607352 + L1MC5 LINE L1 7808 7906 -55 1724 128 11 40 chr11_random 2879096 2879369 -607033 + AluSq SINE Alu 14 278 -35 1276 142 3 1 chr11_random 2879369 2883226 -603176 - ALR/Alpha Satellite centromeric -4 3864 1 1776 144 7 21 chr11_random 2883326 2883610 -602792 - AluSq SINE Alu -33 280 1 848 187 169 72 chr11_random 2883610 2883888 -602514 - MLT1A1 LTR MaLR -60 305 1 1125 269 74 63 chr11_random 2883888 2884195 -602207 - L1ME3 LINE L1 -254 5908 5606 426 20 0 0 chr11_random 2884195 2884246 -602156 + (TA)n Simple_repeat Simple_repeat 1 51 0 1125 269 74 63 chr11_random 2884246 2884416 -601986 - L1ME3 LINE L1 -556 5606 5420 1374 149 49 98 chr11_random 2884416 2884744 -601658 - AluSx SINE Alu 0 312 1 1125 269 74 63 chr11_random 2884744 2884872 -601530 - L1ME3 LINE L1 -742 5420 5295 504 50 0 0 chr11_random 2885186 2885246 -601156 + L1PA4 LINE L1 6040 6099 -56 246 174 0 10 chr11_random 2885250 2885295 -601107 - Alu SINE Alu -264 36 2 372 92 0 126 chr11_random 2885372 2885510 -600892 + L1PA4 LINE L1 5936 6036 -119 * 32260 46 5 1 chr11_random 2885509 2890235 -596167 + L1PA4 LINE L1 1415 6155 0 457 219 125 0 chr11_random 2890307 2890403 -595999 - Tigger3(Golem) DNA MER2_type -2921 108 1 1446 252 71 21 chr11_random 2891131 2891655 -594747 - Charlie2a DNA MER1_type -1774 1088 539 450 173 13 0 chr11_random 2891818 2891893 -594509 + Tigger3(Golem) DNA MER2_type 1 76 -2953 702 171 93 0 chr11_random 2891894 2892023 -594379 + Tigger3(Golem) DNA MER2_type 2889 3029 0 216 0 0 0 chr11_random 2892548 2892572 -593830 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr11_random 2893766 2893788 -592614 + AT_rich Low_complexity Low_complexity 1 22 0 2133 139 0 0 chr11_random 2894306 2894601 -591801 - AluSg SINE Alu -15 295 1 2044 115 0 56 chr11_random 2895263 2895585 -590817 - AluSx SINE Alu -8 304 1 1452 136 0 5 chr11_random 2897343 2897556 -588846 + AluJo SINE Alu 1 212 -100 11810 121 3 8 chr11_random 2897657 2899388 -587014 - L1P LINE L1 -4414 1732 11 225 0 0 0 chr11_random 2899406 2899431 -586971 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2050 115 0 7 chr11_random 2899435 2899713 -586689 - AluY SINE Alu -35 276 1 444 279 46 83 chr11_random 2899844 2900084 -586318 - MLT1J LTR MaLR -65 446 216 557 296 14 0 chr11_random 2901409 2901551 -584851 + MIR SINE MIR 49 192 -70 2530 165 59 9 chr11_random 2901607 2902049 -584353 - MLT2C2 LTR ERVL 0 464 1 27 0 0 0 chr11_random 2902940 2902967 -583435 + AT_rich Low_complexity Low_complexity 1 27 0 334 23 0 0 chr11_random 2902985 2903028 -583374 - L1PA2 LINE L1 -2 6153 6111 4108 30 8 0 chr11_random 2903029 2903503 -582899 + L1PA2 LINE L1 5624 6101 -54 2850 96 3 0 chr11_random 2904185 2904539 -581863 - THE1A LTR MaLR 0 355 1 9153 166 96 1 chr11_random 2904540 2905983 -580419 - THE1A-int LTR MaLR -1 1579 1 2657 114 8 0 chr11_random 2905983 2906335 -580067 - THE1A LTR MaLR 0 355 1 366 159 16 0 chr11_random 2906399 2906462 -579940 + MIR SINE MIR 86 149 -113 2292 98 3 16 chr11_random 2906464 2906780 -579622 + AluSx SINE Alu 1 312 0 263 200 129 47 chr11_random 2907407 2907492 -578910 + MLT1A1 LTR MaLR 95 186 -188 373 323 19 38 chr11_random 2907599 2907757 -578645 - MIR SINE MIR -30 232 78 1337 213 29 35 chr11_random 2907896 2908239 -578163 + MLT1A1 LTR MaLR 1 341 -24 249 334 103 0 chr11_random 2908243 2908353 -578049 - MIR SINE MIR -69 139 46 804 269 115 40 chr11_random 2908534 2908855 -577547 + MLT1I LTR MaLR 7 361 -48 2082 117 47 70 chr11_random 2908855 2909239 -577163 - THE1C LTR MaLR 0 375 1 804 269 115 40 chr11_random 2909239 2909292 -577110 + MLT1I LTR MaLR 361 409 0 243 253 107 0 chr11_random 2909477 2909552 -576850 - Charlie8 DNA MER1_type -2236 181 99 277 253 96 0 chr11_random 2909677 2909760 -576642 + MIR SINE MIR 55 145 -63 828 201 15 10 chr11_random 2911076 2911275 -575127 + L1MA6 LINE L1 6099 6298 -2 337 373 28 17 chr11_random 2911436 2911613 -574789 + MER5A DNA MER1_type 1 179 -10 685 313 0 25 chr11_random 2911639 2911837 -574565 - MLT1K LTR MaLR -23 565 373 430 342 84 18 chr11_random 2911856 2912081 -574321 - MIR SINE MIR -7 255 16 968 53 0 0 chr11_random 2912986 2913099 -573303 + AluSg/x SINE Alu 170 282 -30 718 11 11 11 chr11_random 2913198 2913290 -573112 + (TTTC)n Simple_repeat Simple_repeat 1 92 0 194 367 0 0 chr11_random 2914122 2914182 -572220 - L2 LINE L2 -12 3260 3201 926 180 0 18 chr11_random 2914362 2914529 -571873 - L1PB4 LINE L1 0 6156 5993 1739 139 21 0 chr11_random 2914530 2914810 -571592 - L1PB4 LINE L1 -213 5943 5658 765 215 82 15 chr11_random 2915098 2915293 -571109 - MER3 DNA MER1_type 0 209 2 195 42 0 0 chr11_random 2916709 2916733 -569669 + (T)n Simple_repeat Simple_repeat 1 24 0 297 344 33 0 chr11_random 2916747 2916898 -569504 + L1ME LINE L1 5496 5651 -470 1574 98 10 0 chr11_random 2916898 2917103 -569299 + AluSq SINE Alu 85 291 -22 617 297 99 5 chr11_random 2917138 2917330 -569072 + MIR SINE MIR 25 234 -28 235 311 66 8 chr11_random 2917408 2917530 -568872 + MIR SINE MIR 72 200 -62 23 68 0 0 chr11_random 2917538 2917582 -568820 + AT_rich Low_complexity Low_complexity 1 44 0 244 74 0 56 chr11_random 2917627 2917681 -568721 + (TATAA)n Simple_repeat Simple_repeat 5 55 0 227 229 57 16 chr11_random 2917684 2917806 -568596 + (TA)n Simple_repeat Simple_repeat 2 128 0 1983 105 0 0 chr11_random 2917957 2918214 -568188 - AluSx SINE Alu -8 304 48 270 0 0 0 chr11_random 2918485 2918515 -567887 + (TG)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr11_random 2918535 2918558 -567844 + AT_rich Low_complexity Low_complexity 1 23 0 1662 164 30 0 chr11_random 2918558 2918826 -567576 - AluJo SINE Alu -23 289 14 332 272 12 12 chr11_random 2919786 2919867 -566535 + L2 LINE L2 3213 3293 -20 2254 66 0 14 chr11_random 2919891 2920180 -566222 + AluY SINE Alu 21 305 -6 577 154 0 0 chr11_random 2920190 2920268 -566134 + AluJ/FLAM SINE Alu 2 79 -233 1751 107 9 0 chr11_random 2920268 2920530 -565872 + AluSx SINE Alu 48 311 0 25 0 0 0 chr11_random 2920542 2920567 -565835 + AT_rich Low_complexity Low_complexity 1 25 0 261 321 97 46 chr11_random 2920572 2920717 -565685 + L1MC3 LINE L1 5355 5491 -635 1683 176 22 22 chr11_random 2920717 2921029 -565373 + AluJo SINE Alu 1 312 0 261 321 97 46 chr11_random 2921029 2921255 -565147 + L1MC3 LINE L1 5491 5746 -380 459 0 0 0 chr11_random 2921494 2921545 -564857 + (TTTAA)n Simple_repeat Simple_repeat 1 51 0 387 269 0 28 chr11_random 2921547 2921655 -564747 - MIR SINE MIR -98 164 60 198 296 182 8 chr11_random 2921680 2921731 -564671 + MIR SINE MIR 34 75 -187 2066 135 3 0 chr11_random 2921731 2922027 -564375 - AluSx SINE Alu -15 297 1 198 296 182 8 chr11_random 2922027 2922107 -564295 + MIR SINE MIR 75 188 -74 850 244 78 38 chr11_random 2922131 2922450 -563952 + L1M4 LINE L1 4113 4444 -1702 5988 178 20 167 chr11_random 2922461 2922749 -563653 + L1MC3 LINE L1 5746 6075 -1710 2187 124 0 0 chr11_random 2922749 2923039 -563363 - AluSx SINE Alu -22 290 1 5988 178 20 167 chr11_random 2923039 2924129 -562273 + L1MC3 LINE L1 6075 7324 -461 2194 114 0 7 chr11_random 2924129 2924426 -561976 + AluSp SINE Alu 1 295 -18 5988 178 20 167 chr11_random 2924426 2924540 -561862 + L1MC3 LINE L1 7324 7453 -332 4324 34 14 4 chr11_random 2924540 2925038 -561364 - L1PA4 LINE L1 0 6155 5653 5988 178 20 167 chr11_random 2925038 2925289 -561113 + L1MC3 LINE L1 7453 7151 -634 243 259 0 0 chr11_random 2925289 2925343 -561059 + MLT1F1 LTR MaLR 71 124 -443 5988 178 20 167 chr11_random 2925343 2925789 -560613 + L1MC3 LINE L1 7150 7660 -125 708 173 43 62 chr11_random 2925795 2925822 -560580 + L1MC3 LINE L1 7564 7590 -195 2140 127 0 0 chr11_random 2925822 2926113 -560289 + AluSp SINE Alu 1 291 -22 708 173 43 62 chr11_random 2926113 2926293 -560109 + L1MC3 LINE L1 7590 7767 -18 609 226 38 8 chr11_random 2927240 2927373 -559029 - AluJo SINE Alu -75 237 101 2968 133 60 11 chr11_random 2927402 2927868 -558534 - LTR22B LTR ERVK -3 489 1 303 282 68 49 chr11_random 2928326 2928489 -557913 - MIR3 SINE MIR -6 202 37 2133 152 0 0 chr11_random 2928830 2929140 -557262 + AluSx SINE Alu 3 312 0 2226 133 42 31 chr11_random 2929731 2930091 -556311 + THE1B LTR MaLR 1 364 0 1552 83 10 0 chr11_random 2930511 2930703 -555699 - AluSq SINE Alu -110 203 10 435 254 26 0 chr11_random 2931423 2931537 -554865 + MIR SINE MIR 92 208 -54 672 97 34 41 chr11_random 2931557 2931853 -554549 + (TAGA)n Simple_repeat Simple_repeat 1 293 0 575 134 29 35 chr11_random 2931883 2932055 -554347 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 295 296 0 0 chr11_random 2932087 2932175 -554227 + (TA)n Simple_repeat Simple_repeat 2 89 0 3031 146 6 10 chr11_random 2932362 2932849 -553553 - L1PB4 LINE L1 -2 6154 5670 226 345 0 27 chr11_random 2932910 2933020 -553382 - L2 LINE L2 -299 2973 2867 2596 169 41 159 chr11_random 2933274 2934098 -552304 - LTR8A LTR ERV1 0 727 1 1747 154 14 10 chr11_random 2935025 2935318 -551084 + AluJo SINE Alu 1 294 -18 260 291 12 18 chr11_random 2935383 2935483 -550919 + MIR SINE MIR 48 143 -65 1964 136 3 0 chr11_random 2935491 2935778 -550624 + AluSx SINE Alu 22 309 -3 336 311 38 0 chr11_random 2935858 2935964 -550438 + MIR3 SINE MIR 61 170 -38 2389 145 63 36 chr11_random 2936079 2936329 -550073 - MSTB LTR MaLR 0 426 158 1745 162 0 0 chr11_random 2936329 2936653 -549749 + AluY SINE Alu 17 340 0 2389 145 63 36 chr11_random 2936653 2936816 -549586 - MSTB LTR MaLR -268 158 1 2118 127 17 0 chr11_random 2937685 2937984 -548418 - AluSx SINE Alu -8 304 1 239 189 42 11 chr11_random 2937989 2938084 -548318 + (TTATA)n Simple_repeat Simple_repeat 5 102 0 23 33 0 0 chr11_random 2938169 2938199 -548203 + AT_rich Low_complexity Low_complexity 1 30 0 1781 203 55 0 chr11_random 2938296 2938626 -547776 - MER7A DNA MER2_type 0 346 1 315 49 0 0 chr11_random 2938666 2938707 -547695 + (TG)n Simple_repeat Simple_repeat 2 42 0 499 145 0 0 chr11_random 2938708 2938777 -547625 - AluSg/x SINE Alu -29 283 215 288 128 0 0 chr11_random 2938778 2938817 -547585 - AluSp SINE Alu -131 172 134 1141 162 19 37 chr11_random 2938999 2939215 -547187 + MLT1D LTR MaLR 3 214 -291 1386 201 39 32 chr11_random 2939215 2939498 -546904 + AluJo SINE Alu 1 285 -17 467 161 0 12 chr11_random 2939499 2939580 -546822 - MLT1D LTR MaLR -391 114 35 400 125 0 0 chr11_random 2939580 2939636 -546766 + Alu SINE Alu 238 293 -19 2420 174 16 19 chr11_random 2940288 2940621 -545781 - MSTB LTR MaLR 0 426 93 2100 142 49 27 chr11_random 2940621 2940988 -545414 + THE1C LTR MaLR 1 375 0 2420 174 16 19 chr11_random 2940988 2941079 -545323 - MSTB LTR MaLR -333 93 3 516 359 11 6 chr11_random 2941841 2942022 -544380 + MIR SINE MIR 11 192 -70 2606 158 59 9 chr11_random 2942078 2942520 -543882 - MLT2C2 LTR ERVL 0 464 1 2866 99 3 0 chr11_random 2944105 2944459 -541943 - THE1A LTR MaLR 0 355 1 12104 107 3 1 chr11_random 2944460 2946036 -540366 - THE1A-int LTR MaLR -1 1579 1 2831 102 3 0 chr11_random 2946036 2946390 -540012 - THE1A LTR MaLR 0 355 1 327 175 16 0 chr11_random 2946454 2946517 -539885 + MIR SINE MIR 86 149 -113 871 113 8 0 chr11_random 2946519 2946643 -539759 + AluSq/x SINE Alu 1 125 -188 6742 105 1 2 chr11_random 2946743 2947733 -538669 - L1P LINE L1 -2597 3549 2561 2146 126 0 0 chr11_random 2949039 2949324 -537078 + AluSx SINE Alu 1 285 -27 21 0 0 0 chr11_random 2949324 2949345 -537057 + AT_rich Low_complexity Low_complexity 1 21 0 1612 154 90 4 chr11_random 2949668 2949947 -536455 - AluSx SINE Alu -8 304 2 422 212 11 52 chr11_random 2950002 2950179 -536223 - MER33 DNA MER1_type -22 302 43 2043 135 0 14 chr11_random 2950330 2950627 -535775 - AluSp SINE Alu -20 293 1 2214 134 0 0 chr11_random 2951121 2951428 -534974 - AluSx SINE Alu -5 307 1 2200 138 0 0 chr11_random 2951922 2952227 -534175 - AluSg SINE Alu -5 305 1 1131 155 0 0 chr11_random 2953535 2953727 -532675 - AluSg/x SINE Alu 0 307 116 276 188 129 47 chr11_random 2953914 2953999 -532403 + MLT1A1 LTR MaLR 95 186 -188 371 323 19 38 chr11_random 2954106 2954264 -532138 - MIR SINE MIR -30 232 78 1378 199 29 19 chr11_random 2954403 2954715 -531687 + MLT1A1 LTR MaLR 1 315 -50 236 314 154 0 chr11_random 2954754 2954860 -531542 - MIR SINE MIR -69 139 46 830 251 120 43 chr11_random 2955041 2955361 -531041 + MLT1I LTR MaLR 7 362 -47 2184 110 47 65 chr11_random 2955361 2955743 -530659 - THE1C LTR MaLR 0 375 1 830 251 120 43 chr11_random 2955743 2955796 -530606 + MLT1I LTR MaLR 362 409 0 252 253 107 0 chr11_random 2955981 2956056 -530346 - Charlie8 DNA MER1_type -2236 181 99 246 261 81 54 chr11_random 2956181 2956292 -530110 + MIR3 SINE MIR 55 168 -40 953 181 15 10 chr11_random 2957622 2957821 -528581 + L1MA6 LINE L1 6099 6298 -2 371 367 28 17 chr11_random 2957981 2958158 -528244 + MER5A DNA MER1_type 1 179 -10 622 293 29 24 chr11_random 2958169 2958377 -528025 - MLT1K LTR MaLR -7 581 373 2136 139 0 13 chr11_random 2959107 2959416 -526986 + AluSx SINE Alu 1 305 -7 351 249 123 37 chr11_random 2959614 2959901 -526501 + MLT1G LTR MaLR 226 541 -8 21 0 0 0 chr11_random 2960262 2960283 -526119 + AT_rich Low_complexity Low_complexity 1 21 0 688 293 38 9 chr11_random 2960283 2960495 -525907 - MIR SINE MIR -35 227 10 2395 39 0 0 chr11_random 2960562 2960842 -525560 - L1P LINE L1 -1772 4374 4095 1319 125 3 3 chr11_random 2961088 2965115 -521287 + ALR/Alpha Satellite centromeric 1 4029 -19 * 4431 94 17 4 chr11_random 2965099 2966110 -520292 + MER11A LTR ERVK 1 1261 -5 1242 137 3 1 chr11_random 2966113 2967895 -518507 + ALR/Alpha Satellite centromeric 1 1785 -53 21161 71 2 6 chr11_random 2967895 2971342 -515060 + L1PA5 LINE L1 2719 6151 -3 1379 126 4 2 chr11_random 2971348 2973132 -513270 + ALR/Alpha Satellite centromeric 1 1785 -60 481 303 41 74 chr11_random 2973550 2973794 -512608 + MLT1J LTR MaLR 216 451 -60 2148 101 0 0 chr11_random 2973917 2974193 -512209 + AluY SINE Alu 1 276 -35 192 40 0 0 chr11_random 2974197 2974222 -512180 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 41153 69 4 3 chr11_random 2974240 2980375 -506027 + L1PA4 LINE L1 11 6152 -3 356 320 82 24 chr11_random 2980763 2980937 -505465 + MIR3 SINE MIR 20 207 -1 1843 157 17 3 chr11_random 2980951 2981245 -505157 + AluSp SINE Alu 2 299 -14 953 248 216 19 chr11_random 2981440 2981949 -504453 - L2 LINE L2 -2 3311 2664 887 116 18 92 chr11_random 2981952 2982116 -504286 + AluSg/x SINE Alu 140 291 -21 602 237 64 0 chr11_random 2982126 2982299 -504103 - L2 LINE L2 -639 2675 2492 243 205 143 80 chr11_random 2982365 2982477 -503925 + L2 LINE L2 3154 3272 0 1534 177 22 48 chr11_random 2982599 2982915 -503487 - AluSx SINE Alu -4 308 1 7083 53 4 0 chr11_random 2983126 2983968 -502434 + L1PA4 LINE L1 5311 6155 0 608 246 0 0 chr11_random 2985049 2985163 -501239 - MER81 DNA DNA 0 114 1 719 192 0 142 chr11_random 2985343 2985562 -500840 + L1MC4a LINE L1 6677 6864 -944 1645 176 3 13 chr11_random 2985566 2985868 -500534 + AluJo SINE Alu 14 312 0 877 158 0 0 chr11_random 2985879 2986012 -500390 + AluSq/x SINE Alu 1 133 -180 2114 129 7 0 chr11_random 2986082 2986384 -500018 + AluSx SINE Alu 1 304 -8 2311 109 0 0 chr11_random 2986924 2987228 -499174 + AluY SINE Alu 1 304 -7 33 25 0 0 chr11_random 2988832 2988872 -497530 + AT_rich Low_complexity Low_complexity 1 40 0 2657 81 27 0 chr11_random 2988855 2989190 -497212 - L1PA7 LINE L1 -2 6152 5809 257 57 0 0 chr11_random 2990099 2990134 -496268 - MADE1 DNA Mariner -45 35 1 212 292 0 0 chr11_random 2990851 2990899 -495503 + (CACG)n Simple_repeat Simple_repeat 1 48 0 3052 174 19 74 chr11_random 2990924 2991655 -494747 + LTR8 LTR ERV1 1 691 0 725 297 90 18 chr11_random 2991695 2992038 -494364 - L2 LINE L2 -137 3176 2809 2150 230 107 33 chr11_random 2992110 2992958 -493444 + L1MC4 LINE L1 6962 7872 -170 5414 116 29 46 chr11_random 2993047 2994621 -491781 - pTR5 LTR ERV1 0 2438 743 237 204 0 0 chr11_random 2994624 2994673 -491729 + L1MC4 LINE L1 7992 8040 -2 261 306 71 0 chr11_random 2995534 2995632 -490770 + MIR SINE MIR 36 140 -122 7757 18 0 0 chr11_random 2996886 2998031 -488371 - L1PA2 LINE L1 0 6155 5010 1134 28 7 0 chr11_random 2998031 2998175 -488227 + L1PA2 LINE L1 4861 5005 -1141 2198 122 0 0 chr11_random 2998177 2998472 -487930 - AluSx SINE Alu -17 295 1 291 28 0 0 chr11_random 2998632 2998668 -487734 + (CA)n Simple_repeat Simple_repeat 2 37 0 437 295 126 40 chr11_random 2998688 2999061 -487341 + L2 LINE L2 2224 2628 -686 22 0 0 0 chr11_random 2999476 2999498 -486904 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr11_random 2999602 2999624 -486778 + AT_rich Low_complexity Low_complexity 1 22 0 408 68 94 26 chr11_random 2999624 3000038 -486364 + (TA)n Simple_repeat Simple_repeat 1 441 0 303 78 91 32 chr11_random 3000054 3000280 -486122 + (TA)n Simple_repeat Simple_repeat 1 239 0 380 110 74 33 chr11_random 3000292 3000800 -485602 + (TA)n Simple_repeat Simple_repeat 1 528 0 264 101 0 87 chr11_random 3000806 3000944 -485458 + (TTA)n Simple_repeat Simple_repeat 3 128 0 28 29 0 0 chr11_random 3000954 3000989 -485413 + AT_rich Low_complexity Low_complexity 1 35 0 434 65 89 24 chr11_random 3000989 3001158 -485244 + (TA)n Simple_repeat Simple_repeat 1 180 0 224 152 0 65 chr11_random 3001158 3001204 -485198 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 312 245 0 34 chr11_random 3001537 3001651 -484751 + FRAM/FAM SINE Alu 21 79 -96 27 29 0 0 chr11_random 3003036 3003070 -483332 + AT_rich Low_complexity Low_complexity 1 34 0 257 230 14 0 chr11_random 3003347 3003421 -482981 + (CATATA)n Simple_repeat Simple_repeat 6 80 0 372 304 110 37 chr11_random 3003459 3003913 -482489 + L1ME4a LINE L1 5635 6121 0 522 252 5 57 chr11_random 3003935 3004145 -482257 + L1ME LINE L1 5605 5803 -318 2323 76 0 3 chr11_random 3004153 3004444 -481958 - AluY SINE Alu -21 290 1 845 152 0 15 chr11_random 3004473 3004605 -481797 + FLAM_C SINE Alu 1 130 -13 237 239 0 15 chr11_random 3005338 3005405 -480997 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 229 235 198 0 chr11_random 3005566 3005647 -480755 - L2 LINE L2 -8 3305 3209 447 276 10 0 chr11_random 3007917 3008015 -478387 - MIR SINE MIR -138 124 26 1862 116 35 64 chr11_random 3008021 3008332 -478070 + AluSx SINE Alu 1 302 -10 257 0 0 29 chr11_random 3008703 3008737 -477665 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 342 0 0 0 chr11_random 3009436 3009474 -476928 + (TG)n Simple_repeat Simple_repeat 2 39 0 7980 135 25 48 chr11_random 3009705 3011182 -475220 - THE1-int LTR MaLR -131 1449 7 228 200 0 0 chr11_random 3011456 3011506 -474896 + (TATG)n Simple_repeat Simple_repeat 2 51 0 804 181 0 0 chr11_random 3011593 3011720 -474682 + AluJb SINE Alu 1 127 -185 336 230 48 85 chr11_random 3012156 3012321 -474081 - MIR SINE MIR -25 237 79 4803 119 113 117 chr11_random 3012429 3013977 -472425 + pTR5 LTR ERV1 743 2438 0 613 228 114 65 chr11_random 3014977 3015223 -471179 + MIR SINE MIR 4 261 -1 2050 140 76 15 chr11_random 3015953 3016295 -470107 + THE1B LTR MaLR 2 364 0 1024 274 65 36 chr11_random 3016425 3016987 -469415 + L2 LINE L2 2481 3057 -256 375 295 0 0 chr11_random 3017078 3017183 -469219 + MER94 DNA DNA 27 131 -3 471 239 22 108 chr11_random 3017195 3017417 -468985 + L2 LINE L2 3111 3313 0 2649 95 20 0 chr11_random 3017683 3018040 -468362 - THE1B LTR MaLR 0 364 1 204 409 65 0 chr11_random 3018296 3018389 -468013 + L2 LINE L2 3185 3283 -30 28 0 0 0 chr11_random 3019320 3019348 -467054 + AT_rich Low_complexity Low_complexity 1 28 0 7417 42 0 0 chr11_random 3019435 3020356 -466046 - L1PA3 LINE L1 0 6155 5235 3368 42 0 0 chr11_random 3020356 3020789 -465613 + L1PA3 LINE L1 4808 5240 -906 26024 65 4 1 chr11_random 3021998 3026352 -460050 - L1PA5 LINE L1 0 6154 1793 1058 136 4 1 chr11_random 3026452 3027297 -459105 - ALR/Alpha Satellite centromeric 0 847 1 5424 156 27 10 chr11_random 3027331 3028361 -458041 - MER11C LTR ERVK -23 1048 1 7244 78 7 0 chr11_random 3028361 3029354 -457048 - HERVK11 LTR ERVK 0 7953 6954 * 44850 105 11 15 chr11_random 3029337 3036130 -450272 - HERVK11 LTR ERVK -1187 6766 1 5255 165 35 25 chr11_random 3036130 3037191 -449211 - MER11C LTR ERVK 0 1071 1 1191 141 3 7 chr11_random 3037191 3037551 -448851 - ALR/Alpha Satellite centromeric -1 1749 1389 1990 134 0 3 chr11_random 3037551 3037843 -448559 - AluY SINE Alu -20 291 1 1191 141 3 7 chr11_random 3037843 3038948 -447454 - ALR/Alpha Satellite centromeric -361 1389 1 1005 163 0 9 chr11_random 3038964 3039206 -447196 - ALR/Alpha Satellite centromeric 0 239 1 1242 135 3 1 chr11_random 3039306 3041162 -445240 + ALR/Alpha Satellite centromeric 1 1860 -53 19782 71 2 7 chr11_random 3041162 3044610 -441792 + L1PA5 LINE L1 2719 6151 -3 1348 125 3 1 chr11_random 3044616 3051606 -434796 + ALR/Alpha Satellite centromeric 1 7001 0 1263 127 3 7 chr11_random 3051618 3054507 -431895 + ALR/Alpha Satellite centromeric 1 2877 -48 4433 86 21 6 chr11_random 3054507 3055524 -430878 + MER11A LTR ERVK 1 1266 0 1251 124 4 2 chr11_random 3055524 3062474 -423928 + ALR/Alpha Satellite centromeric 1 6960 -54 1848 183 0 0 chr11_random 3064598 3064898 -421504 - AluSx SINE Alu -12 300 1 764 181 45 39 chr11_random 3065201 3065356 -421046 - MER21B LTR ERV1 -707 156 1 714 234 15 29 chr11_random 3065359 3065564 -420838 + L1ME1 LINE L1 5785 5986 -180 1614 146 27 8 chr11_random 3065731 3065991 -420411 - AluSq SINE Alu 0 313 49 412 187 7 29 chr11_random 3066370 3066463 -419939 + AluJ/FLAM SINE Alu 1 62 -240 228 292 0 0 chr11_random 3066515 3066645 -419757 + (GTCTG)n Simple_repeat Simple_repeat 3 132 0 285 283 0 0 chr11_random 3066677 3066829 -419573 + (GTCTG)n Simple_repeat Simple_repeat 4 155 0 402 297 0 0 chr11_random 3066832 3066950 -419452 + (CAGTC)n Simple_repeat Simple_repeat 3 120 0 351 281 0 0 chr11_random 3066954 3067114 -419288 + (GTCTG)n Simple_repeat Simple_repeat 4 163 0 269 288 0 0 chr11_random 3067115 3067188 -419214 + (CAGTC)n Simple_repeat Simple_repeat 1 73 0 212 211 14 0 chr11_random 3067192 3067263 -419139 + (GTCTG)n Simple_repeat Simple_repeat 4 75 0 219 224 0 0 chr11_random 3067264 3067313 -419089 + (CAGTC)n Simple_repeat Simple_repeat 1 49 0 300 270 0 0 chr11_random 3067325 3067451 -418951 + (CAGTC)n Simple_repeat Simple_repeat 3 128 0 324 286 0 0 chr11_random 3067540 3067708 -418694 + (GTCTG)n Simple_repeat Simple_repeat 3 170 0 339 295 0 0 chr11_random 3067713 3067808 -418594 + (CAGTC)n Simple_repeat Simple_repeat 5 99 0 183 203 0 0 chr11_random 3067815 3067874 -418528 + (GTCTG)n Simple_repeat Simple_repeat 3 61 0 1481 170 31 7 chr11_random 3067888 3068182 -418220 - AluSq SINE Alu -12 301 1 291 310 128 15 chr11_random 3068271 3068732 -417670 + L1ME3A LINE L1 4263 4775 -1371 21 0 0 0 chr11_random 3069000 3069021 -417381 + AT_rich Low_complexity Low_complexity 1 21 0 642 194 129 48 chr11_random 3069033 3069281 -417121 - MER33 DNA MER1_type 0 324 57 752 299 88 32 chr11_random 3069456 3070021 -416381 + L1ME3A LINE L1 5264 5860 -310 387 140 0 0 chr11_random 3070105 3070162 -416240 + AluJ/FLAM SINE Alu 46 102 -200 1490 150 9 4 chr11_random 3070162 3070395 -416007 - AluSp SINE Alu -79 234 1 1711 199 0 0 chr11_random 3071251 3071548 -414854 - AluJb SINE Alu -15 297 1 3333 216 66 27 chr11_random 3071720 3071809 -414593 + L1MC3 LINE L1 6366 6450 -1335 1970 156 0 0 chr11_random 3071809 3072110 -414292 - AluSg SINE Alu -9 301 1 3333 216 66 27 chr11_random 3072110 3072947 -413455 + L1MC3 LINE L1 6450 7328 -457 424 233 188 7 chr11_random 3073861 3074000 -412402 + MER5A DNA MER1_type 1 184 -5 288 0 0 0 chr11_random 3074849 3074881 -411521 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 260 266 13 38 chr11_random 3076393 3076472 -409930 - MIR SINE MIR -30 232 156 610 219 62 12 chr11_random 3077186 3077346 -409056 + MIR SINE MIR 95 262 0 843 202 26 26 chr11_random 3077355 3077548 -408854 - MER46A DNA MER2_type -1 235 43 1221 139 3 4 chr11_random 3077931 3084566 -401836 + ALR/Alpha Satellite centromeric 1 6630 -1 1239 134 7 0 chr11_random 3084577 3086873 -399529 + ALR/Alpha Satellite centromeric 1 2312 -2 1164 144 4 3 chr11_random 3086887 3090904 -395498 + ALR/Alpha Satellite centromeric 1 4020 -11 1191 142 2 10 chr11_random 3090920 3092026 -394376 + ALR/Alpha Satellite centromeric 1 1383 -368 1983 134 0 3 chr11_random 3092026 3092318 -394084 + AluY SINE Alu 1 291 -20 1191 142 2 10 chr11_random 3092318 3092678 -393724 + ALR/Alpha Satellite centromeric 1383 1744 -7 5327 163 35 25 chr11_random 3092678 3093739 -392663 + MER11C LTR ERVK 1 1071 0 11097 122 30 1 chr11_random 3093739 3095379 -391023 + HERVK11 LTR ERVK 1 1688 -6265 8065 11 0 0 chr11_random 3095389 3096740 -389662 - L1HS LINE L1 0 6155 4805 23240 26 0 0 chr11_random 3096740 3099518 -386884 + L1HS LINE L1 2019 4796 -1350 13163 108 1 17 chr11_random 3099518 3101399 -385003 + HERVK11 LTR ERVK 1679 3529 -4424 23243 97 6 6 chr11_random 3101447 3104681 -381721 + HERVK11 LTR ERVK 3532 6766 -1187 7592 80 7 0 chr11_random 3104664 3105657 -380745 + HERVK11 LTR ERVK 6954 7953 0 * 5809 157 27 9 chr11_random 3105657 3106686 -379716 + MER11C LTR ERVK 1 1048 -23 1260 142 3 2 chr11_random 3106720 3117204 -369198 + ALR/Alpha Satellite centromeric 1 10492 -26 6380 85 0 0 chr11_random 3117205 3118053 -368349 - L1PA4 LINE L1 -5 6150 5303 4408 70 0 0 chr11_random 3118054 3118622 -367780 - L1PA4 LINE L1 -3 6152 5585 1252 153 5 2 chr11_random 3118624 3130512 -355890 - ALR/Alpha Satellite centromeric -1 11924 1 20696 54 7 1 chr11_random 3130514 3133203 -353199 - L1PA4 LINE L1 -1383 4763 2060 6497 80 2 3 chr11_random 3133203 3134584 -351818 + L1PA4 LINE L1 4778 6155 0 1033 162 7 2 chr11_random 3134616 3135708 -350694 - ALR/Alpha Satellite centromeric -1 1096 1 1193 146 7 2 chr11_random 3135720 3137038 -349364 - ALR/Alpha Satellite centromeric 0 1325 1 1195 146 5 2 chr11_random 3137058 3146547 -339855 - ALR/Alpha Satellite centromeric 0 9519 1 5304 157 41 28 chr11_random 3146552 3147605 -338797 - MER11C LTR ERVK -4 1067 1 7456 91 1 0 chr11_random 3147605 3148604 -337798 - HERVK11 LTR ERVK 0 7953 6954 4124 94 11 0 chr11_random 3148588 3149139 -337263 - HERVK11 LTR ERVK -1188 6765 6209 * 28016 126 9 3 chr11_random 3149134 3153271 -333131 - HERVK11 LTR ERVK -3791 4162 1 5584 156 33 24 chr11_random 3153271 3154330 -332072 - MER11C LTR ERVK 0 1071 3 1153 161 9 11 chr11_random 3154332 3156113 -330289 - ALR/Alpha Satellite centromeric 0 1776 1 7829 85 30 1 chr11_random 3156113 3157221 -329181 + L1P LINE L1 3856 4995 -1151 1148 153 6 3 chr11_random 3157221 3157233 -329169 - ALR/Alpha Satellite centromeric 0 6058 6048 2201 23 0 0 chr11_random 3157233 3157486 -328916 + L1PA2 LINE L1 5895 6153 -2 * 6312 88 1 8 chr11_random 3157483 3158634 -327768 + L1PA5 LINE L1 5002 6153 -1 1148 153 6 3 chr11_random 3157486 3163262 -323140 - ALR/Alpha Satellite centromeric -10 6048 1 1206 141 5 1 chr11_random 3163274 3167143 -319259 - ALR/Alpha Satellite centromeric 0 3886 1 2909 176 4 4 chr11_random 3167144 3167655 -318747 + MER9 LTR ERVK 1 511 0 4928 132 7 3 chr11_random 3167655 3168415 -317987 + HERVK9 LTR ERVK 1 763 -5153 210 217 0 83 chr11_random 3168415 3168475 -317927 + MER5B DNA MER1_type 55 109 -69 13107 95 5 0 chr11_random 3168475 3170386 -316016 + HERVK9 LTR ERVK 824 2786 -3130 7265 102 3 2 chr11_random 3170386 3172256 -314146 + HERVK9 LTR ERVK 3711 5634 -282 1901 118 4 0 chr11_random 3172353 3172632 -313770 + HERVK9 LTR ERVK 5637 5916 0 2927 171 4 4 chr11_random 3172632 3173141 -313261 + MER9 LTR ERVK 1 509 -2 1202 148 4 2 chr11_random 3173151 3178923 -307479 - ALR/Alpha Satellite centromeric -1 5783 1 1061 142 4 1 chr11_random 3178974 3179733 -306669 - ALR/Alpha Satellite centromeric 0 761 1 1074 149 9 2 chr11_random 3179747 3180753 -305649 - ALR/Alpha Satellite centromeric 0 1013 1 1251 154 6 1 chr11_random 3180853 3204956 -281446 - ALR/Alpha Satellite centromeric -2 24209 1 15110 32 1 0 chr11_random 3204960 3207537 -278865 + L1PA2 LINE L1 3576 6152 -3 1219 144 5 4 chr11_random 3207538 3211331 -275071 - ALR/Alpha Satellite centromeric -2 3793 1 6742 123 5 0 chr11_random 3211331 3212313 -274089 + HERVK9 LTR ERVK 4596 5582 -334 3125 146 8 14 chr11_random 3212381 3212895 -273507 + MER9 LTR ERVK 1 511 0 1250 152 3 3 chr11_random 3212895 3218697 -267705 - ALR/Alpha Satellite centromeric -7 6316 1 3934 89 47 0 chr11_random 3218805 3219375 -267027 - L1PA7 LINE L1 0 6154 5558 * 9605 50 1 1 chr11_random 3219372 3221331 -265071 + L1PA4 LINE L1 4189 6147 -8 337 148 0 0 chr11_random 3221340 3221401 -265001 + L1P1 LINE L1 5469 5529 -626 1175 164 4 3 chr11_random 3221404 3223986 -262416 - ALR/Alpha Satellite centromeric 0 2584 1 1164 138 15 3 chr11_random 3223997 3224477 -261925 - ALR/Alpha Satellite centromeric 0 485 1 2177 132 0 0 chr11_random 3224781 3225076 -261326 + AluSx SINE Alu 1 295 -17 353 253 119 36 chr11_random 3225274 3225569 -260833 + MLT1G LTR MaLR 226 549 0 21 0 0 0 chr11_random 3225921 3225942 -260460 + AT_rich Low_complexity Low_complexity 1 21 0 684 293 38 9 chr11_random 3225942 3226154 -260248 - MIR SINE MIR -35 227 10 2337 39 0 0 chr11_random 3226221 3226501 -259901 - L1P LINE L1 -1772 4374 4095 301 303 112 24 chr11_random 3226897 3227184 -259218 + Tigger8 DNA MER2_type 237 548 -118 3136 206 29 85 chr11_random 3228086 3229112 -257290 + LTR5 LTR ERVK 1 969 0 408 333 62 1 chr11_random 3230349 3230532 -255870 + MIR SINE MIR 19 208 -39 180 292 194 0 chr11_random 3230788 3230860 -255542 - MIR SINE MIR -5 257 172 246 182 0 0 chr11_random 3230986 3231030 -255372 - L3 LINE CR1 -887 690 647 323 103 0 17 chr11_random 3231467 3231525 -254877 + (TC)n Simple_repeat Simple_repeat 1 57 0 2694 231 51 26 chr11_random 3231769 3232569 -253833 + MER99 DNA DNA 5 824 -4 779 167 68 123 chr11_random 3233389 3233640 -252762 - MLT2B1 LTR ERVL 0 520 284 7652 143 53 7 chr11_random 3233640 3234973 -251429 - Ricksha DNA DNA -39 3207 1821 1484 135 139 0 chr11_random 3234971 3235223 -251179 - Ricksha DNA DNA -2957 289 3 * 1202 211 61 22 chr11_random 3235226 3235538 -250864 - MLT2B1 LTR ERVL -196 324 1 366 331 67 44 chr11_random 3236048 3236389 -250013 - MLT1J LTR MaLR -158 353 5 531 82 0 0 chr11_random 3236451 3236524 -249878 + (CA)n Simple_repeat Simple_repeat 2 74 0 378 0 0 0 chr11_random 3237012 3237054 -249348 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 208 48 48 24 chr11_random 3237196 3237238 -249164 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 3656 45 0 0 chr11_random 3237238 3237686 -248716 - L1PA4 LINE L1 -10 6145 5698 3267 47 2 0 chr11_random 3237680 3238103 -248299 + L1P LINE L1 4975 5398 -748 5943 12 0 1 chr11_random 3238181 3238859 -247543 - L1PA2 LINE L1 -1 6154 5478 196 273 26 39 chr11_random 3239526 3239603 -246799 + L2 LINE L2 3031 3106 -207 22 56 0 0 chr11_random 3239608 3239644 -246758 + AT_rich Low_complexity Low_complexity 1 36 0 1628 177 11 11 chr11_random 3239646 3239923 -246479 - AluJb SINE Alu -25 287 11 596 280 48 43 chr11_random 3239938 3240145 -246257 + L2 LINE L2 3101 3308 -5 187 363 77 0 chr11_random 3240146 3240237 -246165 + MIR SINE MIR 165 262 0 290 241 175 51 chr11_random 3240867 3241004 -245398 - MIR3 SINE MIR -26 182 29 1128 155 4 0 chr11_random 3241560 3242815 -243587 + ALR/Alpha Satellite centromeric 1 1260 -4 540 0 0 0 chr11_random 3242817 3242877 -243525 + (TA)n Simple_repeat Simple_repeat 1 60 0 1241 145 6 4 chr11_random 3242877 3248854 -237548 + ALR/Alpha Satellite centromeric 1 6206 -3567 1535 72 86 5 chr11_random 3248854 3249063 -237339 - AluY SINE Alu -19 292 67 1241 145 6 4 chr11_random 3249063 3252610 -233792 + ALR/Alpha Satellite centromeric 6206 9746 -27 1192 134 3 3 chr11_random 3252623 3254673 -231729 + ALR/Alpha Satellite centromeric 1 2049 -4 550 141 0 0 chr11_random 3254673 3254758 -231644 + AluSg/x SINE Alu 217 301 -8 1300 129 4 2 chr11_random 3254765 3261444 -224958 + ALR/Alpha Satellite centromeric 1 6689 0 2307 120 0 0 chr11_random 3311444 3311768 -174634 - HERVK11 LTR ERVK -676 7277 6954 * 26435 96 9 11 chr11_random 3311752 3315860 -170542 - HERVK11 LTR ERVK -1188 6765 1165 5005 175 19 1 chr11_random 3315860 3316696 -169706 - HERVK11 LTR ERVK -7102 851 1 7976 87 5 2 chr11_random 3316696 3317764 -168638 - MER11C LTR ERVK 0 1071 1 1189 153 8 2 chr11_random 3317768 3319295 -167107 + ALR/Alpha Satellite centromeric 1 1536 -9 1223 147 15 5 chr11_random 3319307 3328187 -158215 + ALR/Alpha Satellite centromeric 1 8976 -64 9217 52 1 0 chr11_random 3328187 3329346 -157056 - L1PA4 LINE L1 -939 5207 4048 6620 60 25 0 chr11_random 3329346 3330270 -156132 + L1PA4 LINE L1 5207 6152 -3 1222 148 5 2 chr11_random 3330285 3334214 -152188 + ALR/Alpha Satellite centromeric 1 3938 -4 4433 66 0 12 chr11_random 3334214 3334804 -151598 + L1PA4 LINE L1 5570 6152 -3 198 0 0 0 chr11_random 3334810 3334832 -151570 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1158 160 5 2 chr11_random 3334843 3336678 -149724 + ALR/Alpha Satellite centromeric 1 1841 -30 2409 68 0 0 chr11_random 3336678 3337000 -149402 - L1PA4 LINE L1 -1 6154 5833 1192 147 5 2 chr11_random 3336998 3345396 -141006 - ALR/Alpha Satellite centromeric 0 8426 1 1192 146 3 1 chr11_random 3345409 3347893 -138509 - ALR/Alpha Satellite centromeric -1 2489 1 1196 166 6 3 chr11_random 3347905 3364529 -121873 + ALR/Alpha Satellite centromeric 1 16674 -11 1289 153 3 2 chr11_random 3364543 3391280 -95122 + ALR/Alpha Satellite centromeric 1 26779 -2 38339 63 3 68 chr11_random 3391289 3393229 -93173 + L1PA3 LINE L1 7 2071 -4084 7354 50 2 0 chr11_random 3393229 3394928 -91474 - L1PA3 LINE L1 0 6155 4456 38339 63 3 68 chr11_random 3394928 3399562 -86840 + L1PA3 LINE L1 2071 6155 0 1245 149 3 1 chr11_random 3399573 3410722 -75680 - ALR/Alpha Satellite centromeric 0 11165 1 1073 194 2 3 chr11_random 3410822 3411996 -74406 - ALR/Alpha Satellite centromeric 0 1173 1 1178 147 5 2 chr11_random 3412128 3418724 -67678 + ALR/Alpha Satellite centromeric 1 6616 -16 14309 54 1 0 chr11_random 3418726 3420724 -65678 - L1PA3 LINE L1 -597 5558 3560 4352 74 20 3 chr11_random 3420724 3421298 -65104 + L1PA3 LINE L1 5549 6153 -2 1198 149 7 4 chr11_random 3421397 3430454 -55948 + ALR/Alpha Satellite centromeric 1 9086 -67 7882 14 0 0 chr11_random 3430466 3431367 -55035 - L1HS LINE L1 -1 6154 5254 1148 144 5 4 chr11_random 3431369 3434944 -51458 + ALR/Alpha Satellite centromeric 1 3578 -1 28836 66 2 2 chr11_random 3434952 3441105 -45297 + L1PA3 LINE L1 7 6155 0 1182 138 9 2 chr11_random 3441122 3443779 -42623 - ALR/Alpha Satellite centromeric -8 2674 1 40123 73 1 5 chr11_random 3443781 3449952 -36450 - L1PA3 LINE L1 -3 6152 7 1209 154 4 2 chr11_random 3449961 3456377 -30025 - ALR/Alpha Satellite centromeric -7 6426 1 1266 162 2 2 chr11_random 3456484 3481622 -4780 - ALR/Alpha Satellite centromeric 0 29928 4492 2313 84 0 0 chr11_random 3481622 3481906 -4496 + AluY SINE Alu 11 294 -17 1266 162 2 2 chr11_random 3481906 3486400 -2 - ALR/Alpha Satellite centromeric -25436 4492 1