4015 190 42 32 chr10 1524 2418 -140314347 + L1MB4 LINE L1 5277 6179 -1 516 80 67 0 chr10 2434 2509 -140314256 + L1MB8 LINE L1 6099 6178 0 756 234 81 5 chr10 2950 3159 -140313606 - L1MB3 LINE L1 0 6183 5959 609 98 6 58 chr10 3583 3757 -140313008 + (CCCTAA)n Simple_repeat Simple_repeat 4 168 0 1523 195 0 27 chr10 4029 4321 -140312444 + AluSx SINE Alu 6 289 -23 2299 94 0 7 chr10 4609 4906 -140311859 + AluSq SINE Alu 1 295 -18 2233 102 7 0 chr10 5270 5565 -140311200 - AluSx SINE Alu -15 297 1 283 81 0 0 chr10 7295 7332 -140309433 + Alu SINE Alu 1 37 -262 2245 109 0 7 chr10 8393 8695 -140308070 - AluSx SINE Alu -12 300 1 422 188 12 0 chr10 8766 8846 -140307919 + AluJ/FRAM SINE Alu 231 311 -1 2379 100 0 0 chr10 8869 9180 -140307585 - AluSx SINE Alu -1 311 1 849 171 38 13 chr10 9180 9338 -140307427 - AluJb SINE Alu -8 304 143 1904 131 13 36 chr10 11525 11831 -140304934 - AluSx SINE Alu -13 299 1 185 108 27 0 chr10 12351 12388 -140304377 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 1743 179 0 7 chr10 12865 13162 -140303603 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr10 13162 13185 -140303580 + AT_rich Low_complexity Low_complexity 1 23 0 415 287 87 41 chr10 13641 13836 -140302929 + MIR SINE MIR 11 214 -48 1953 155 147 5 chr10 14043 14418 -140302347 + MSTA LTR MaLR 1 428 0 351 132 15 44 chr10 14609 14677 -140302088 + MER116 DNA Mariner 3 68 -12 29 0 0 0 chr10 14730 14759 -140302006 + AT_rich Low_complexity Low_complexity 1 29 0 1186 129 0 43 chr10 14762 14948 -140301817 + AluSx SINE Alu 1 178 -134 1523 136 143 8 chr10 15243 15508 -140301257 - AluSx SINE Alu -11 301 1 184 313 0 15 chr10 16010 16077 -140300688 - MIR SINE MIR 0 262 197 2063 130 20 0 chr10 16107 16407 -140300358 - AluSx SINE Alu -6 306 1 201 74 0 0 chr10 16502 16529 -140300236 + (CA)n Simple_repeat Simple_repeat 2 28 0 199 341 154 11 chr10 17676 17767 -140298998 - L2 LINE L2 -19 3253 3150 505 135 27 0 chr10 17805 17879 -140298886 + FRAM SINE Alu 49 124 -52 1315 217 71 0 chr10 18508 18789 -140297976 - AluJb SINE Alu 0 302 2 33 43 0 0 chr10 19125 19172 -140297593 + AT_rich Low_complexity Low_complexity 1 47 0 2409 61 0 0 chr10 19377 19673 -140297092 - AluY SINE Alu -15 296 1 187 194 81 48 chr10 19944 20006 -140296759 - L2 LINE L2 -618 2696 2633 28 29 0 0 chr10 22670 22705 -140294060 + AT_rich Low_complexity Low_complexity 1 35 0 204 198 209 55 chr10 23143 23234 -140293531 + L2 LINE L2 1860 1964 -1350 24802 39 8 0 chr10 23343 26978 -140289787 - L1PA4 LINE L1 -11 6144 2486 930 186 6 6 chr10 27092 27253 -140289512 - AluJb SINE Alu -15 297 137 1085 318 54 23 chr10 27262 27747 -140289018 + L2 LINE L2 2069 2568 -746 2245 234 114 76 chr10 28199 28504 -140288261 - L1M4 LINE L1 -408 5770 5478 1924 131 13 19 chr10 28504 28818 -140287947 - AluJb SINE Alu 0 312 1 2245 234 114 76 chr10 28818 30228 -140286537 - L1M4 LINE L1 -700 5478 3952 13169 160 42 23 chr10 30228 32601 -140284164 - Tigger1 DNA MER2_type 0 2418 1 2245 234 114 76 chr10 32601 32869 -140283896 - L1M4 LINE L1 -2226 3952 3696 800 255 200 43 chr10 32912 33476 -140283289 - HAL1 LINE L1 -571 1936 1284 893 210 99 67 chr10 33513 33885 -140282880 - HAL1 LINE L1 -1320 1187 804 246 333 114 21 chr10 34173 34408 -140282357 + L2 LINE L2 2732 2987 -285 1025 277 41 32 chr10 34442 34781 -140281984 - MLT1I LTR MaLR -6 403 62 240 258 52 0 chr10 34926 35023 -140281742 + HAL1 LINE L1 2331 2432 -75 672 289 213 49 chr10 35103 35774 -140280991 + L2 LINE L2 1718 2498 -816 1932 206 29 55 chr10 35907 36417 -140280348 + L1M4 LINE L1 4726 5222 -924 660 179 49 24 chr10 37547 37670 -140279095 + FLAM_A SINE Alu 1 126 -7 2683 172 25 25 chr10 37809 38298 -140278467 + L1MCa LINE L1 26 514 -5912 3316 206 47 47 chr10 38458 39396 -140277369 - MER52A LTR ERV1 -656 1099 85 4003 170 30 30 chr10 39735 40452 -140276313 - MER4E LTR ERV1 -3 776 57 4147 153 9 8 chr10 40452 41086 -140275679 - MER41B LTR ERV1 0 635 1 4003 170 30 30 chr10 41086 41144 -140275621 - MER4E LTR ERV1 -721 58 1 223 196 22 0 chr10 41464 41510 -140275255 + GA-rich Low_complexity Low_complexity 2 48 0 46 19 0 0 chr10 42284 42337 -140274428 + AT_rich Low_complexity Low_complexity 1 53 0 2313 112 0 0 chr10 42445 42748 -140274017 - AluSx SINE Alu -9 303 1 2039 111 7 7 chr10 42819 43099 -140273666 - AluSq SINE Alu -33 280 1 707 219 128 27 chr10 43291 43478 -140273287 - MER3 DNA MER1_type -3 206 1 2075 134 0 0 chr10 44243 44560 -140272205 - AluSx SINE Alu 0 317 1 2202 137 137 8 chr10 44631 45010 -140271755 - MSTA LTR MaLR 0 428 1 207 250 19 0 chr10 45401 45453 -140271312 + (TA)n Simple_repeat Simple_repeat 2 54 0 4335 85 15 102 chr10 45717 46444 -140270321 + MER4A LTR ERV1 1 664 0 1097 153 0 0 chr10 47315 47485 -140269280 - FRAM SINE Alu -6 170 1 2267 91 0 0 chr10 48198 48496 -140268269 + AluSc SINE Alu 1 298 -11 373 246 65 36 chr10 49138 49276 -140267489 - MIR3 SINE MIR -6 202 61 194 0 39 0 chr10 49305 49331 -140267434 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 791 245 50 10 chr10 49685 49885 -140266880 - MIR SINE MIR -37 225 18 239 297 228 0 chr10 49892 49993 -140266772 - MIR SINE MIR -134 128 5 1862 141 14 0 chr10 50005 50296 -140266469 + AluJb SINE Alu 1 295 -17 1560 177 0 11 chr10 50719 50996 -140265769 - AluJo SINE Alu -38 274 1 398 164 0 0 chr10 51360 51433 -140265332 + LTR30 LTR ERV1 552 624 -98 36 40 0 0 chr10 51437 51487 -140265278 + AT_rich Low_complexity Low_complexity 1 50 0 1348 176 33 0 chr10 53219 53464 -140263301 - Tigger7 DNA MER2_type -22 2469 2217 31 44 0 0 chr10 54083 54128 -140262637 + GC_rich Low_complexity Low_complexity 1 45 0 385 144 70 0 chr10 54368 54457 -140262308 + AluJ/FRAM SINE Alu 219 298 -4 1294 239 12 60 chr10 54459 54881 -140261884 - L1M4 LINE L1 -1293 4853 4455 1880 149 0 3 chr10 54881 55190 -140261575 - AluY SINE Alu -3 308 1 1294 239 12 60 chr10 55190 55248 -140261517 - L1M4 LINE L1 -1691 4455 4396 901 214 25 5 chr10 55248 55449 -140261316 - AluJo SINE Alu -21 291 87 290 56 0 0 chr10 55470 55506 -140261259 - MER31-int LTR ERV1 -3839 1097 1062 691 132 0 0 chr10 55506 55612 -140261153 + MLT2B3 LTR ERVL 1 106 -448 227 343 36 0 chr10 56408 56548 -140260217 - L1MC4 LINE L1 -524 7518 7374 215 339 27 18 chr10 56557 56669 -140260096 + L2 LINE L2 2687 2799 -515 1150 165 148 8 chr10 57108 57351 -140259414 + AluJb SINE Alu 1 277 -35 302 203 130 0 chr10 57362 57431 -140259334 + LTR35 LTR ERV1 453 530 -88 441 169 26 0 chr10 57492 57569 -140259196 + LTR35 LTR ERV1 540 618 0 21 0 0 0 chr10 57615 57636 -140259129 + AT_rich Low_complexity Low_complexity 1 21 0 1479 45 0 0 chr10 57746 57922 -140258843 - L1PA3 LINE L1 -2 6153 5978 1781 133 10 20 chr10 58031 58333 -140258432 + AluSx SINE Alu 13 311 -1 1945 144 0 10 chr10 58491 58804 -140257961 + AluSx SINE Alu 1 310 -2 1768 107 50 7 chr10 58812 59092 -140257673 + AluSq SINE Alu 1 292 -21 1529 169 61 0 chr10 59106 59385 -140257380 + AluJo SINE Alu 1 296 -16 1842 146 3 34 chr10 59405 59728 -140257037 + AluSq SINE Alu 1 313 0 2038 101 3 14 chr10 59734 60031 -140256734 + AluSx SINE Alu 1 294 -18 1931 125 3 13 chr10 60033 60345 -140256420 + AluSg1 SINE Alu 1 309 0 432 127 0 13 chr10 60666 60745 -140256020 - AluJ/FRAM SINE Alu -3 309 232 2247 75 3 10 chr10 60821 61128 -140255637 + AluSp SINE Alu 1 305 -8 2190 90 0 0 chr10 61841 62131 -140254634 + AluSq SINE Alu 15 304 -9 394 82 0 0 chr10 62785 62834 -140253931 + Alu SINE Alu 15 63 -240 800 192 0 0 chr10 64302 64458 -140252307 + AluSg/x SINE Alu 146 301 -11 1680 177 0 10 chr10 64647 64958 -140251807 - AluJb SINE Alu -4 308 1 198 0 0 0 chr10 65077 65099 -140251666 + (T)n Simple_repeat Simple_repeat 1 22 0 188 200 67 0 chr10 65108 65153 -140251612 + MER5B DNA MER1_type 84 131 -47 6384 154 24 75 chr10 65176 67115 -140249650 - L1MA4A LINE L1 -7 6147 4373 2720 98 0 6 chr10 67115 67481 -140249284 + THE1B LTR MaLR 1 364 0 6384 154 24 75 chr10 67481 67863 -140248902 - L1MA4A LINE L1 -1781 4373 3973 288 330 17 0 chr10 69600 69718 -140247047 - L1MEc LINE L1 -6068 328 209 402 21 0 0 chr10 69719 69766 -140246999 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1978 58 0 0 chr10 69775 70015 -140246750 - AluY SINE Alu -37 274 35 5520 42 0 0 chr10 70312 70987 -140245778 - L1P LINE L1 -2255 3891 3217 19034 70 11 0 chr10 70988 73434 -140243331 + L1P LINE L1 449 2921 -3225 485 205 197 0 chr10 74087 74204 -140242561 + MER82 DNA MER2_type 4 143 -510 1861 216 28 56 chr10 74648 75112 -140241653 + MER82 DNA MER2_type 200 650 -3 662 126 0 0 chr10 75293 75380 -140241385 - 5S rRNA rRNA -31 90 4 828 145 0 0 chr10 75806 75930 -140240835 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr10 76185 76206 -140240559 + AT_rich Low_complexity Low_complexity 1 21 0 634 273 45 0 chr10 76475 76651 -140240114 + MER20 DNA MER1_type 7 190 -29 424 290 3 30 chr10 76790 77164 -140239601 + G-rich Low_complexity Low_complexity 1 363 0 * 511 251 17 33 chr10 77100 77370 -140239395 + GA-rich Low_complexity Low_complexity 1 265 0 444 164 0 0 chr10 77440 77507 -140239258 - AluJ/FLAM SINE Alu -240 72 6 770 146 0 49 chr10 77535 77679 -140239086 - FLAM_C SINE Alu 0 143 7 266 256 31 19 chr10 77712 77872 -140238893 + L1M4 LINE L1 4348 4509 -1637 1646 232 96 15 chr10 77911 78497 -140238268 + L1M4 LINE L1 4740 5372 -774 1795 156 3 0 chr10 78501 78789 -140237976 + AluSx SINE Alu 3 291 -21 296 242 110 11 chr10 78801 78886 -140237879 + MLT1D LTR MaLR 278 371 -134 349 230 80 35 chr10 78886 78999 -140237766 + LTR35 LTR ERV1 1 118 -500 327 253 11 11 chr10 79126 79217 -140237548 + LTR58 LTR ERV1 350 440 -239 468 254 51 0 chr10 79374 79492 -140237273 + LTR35 LTR ERV1 495 618 0 * 734 176 0 14 chr10 79492 79610 -140237155 + MLT1C LTR MaLR 280 467 0 747 50 0 0 chr10 81499 81599 -140235166 + (CA)n Simple_repeat Simple_repeat 2 101 0 202 179 54 0 chr10 83131 83187 -140233578 + (CATCC)n Simple_repeat Simple_repeat 4 62 0 246 264 0 0 chr10 84287 84393 -140232372 + (CA)n Simple_repeat Simple_repeat 1 106 0 205 211 0 22 chr10 84564 84654 -140232111 + (CA)n Simple_repeat Simple_repeat 1 88 0 331 246 57 74 chr10 86822 86944 -140229821 - MIR SINE MIR -62 200 81 1980 129 0 13 chr10 86958 87267 -140229498 - AluSx SINE Alu -7 305 1 234 148 113 0 chr10 88417 88473 -140228292 - MIR SINE MIR -61 147 91 373 172 21 86 chr10 88719 88812 -140227953 + AluSg/x SINE Alu 204 290 -10 184 312 75 65 chr10 88821 88914 -140227851 + MIR3 SINE MIR 113 206 -2 360 77 0 0 chr10 89435 89487 -140227278 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 206 89 48 chr10 89914 90060 -140226705 - FAM SINE Alu -20 165 14 815 176 14 0 chr10 91043 91171 -140225594 + AluJb SINE Alu 2 134 -178 2050 139 0 0 chr10 91171 91473 -140225292 + AluSx SINE Alu 1 302 -10 815 176 14 0 chr10 91473 91486 -140225279 + AluJb SINE Alu 134 145 -167 4144 195 84 5 chr10 91488 92819 -140223946 - MER52A LTR ERV1 -2 1753 177 325 326 11 80 chr10 93492 93667 -140223098 + L1MC5 LINE L1 7769 7931 -30 444 37 0 0 chr10 93961 94015 -140222750 + (CA)n Simple_repeat Simple_repeat 2 55 0 1828 139 75 33 chr10 94823 95182 -140221583 - THE1C LTR MaLR -1 374 1 2199 92 3 22 chr10 95183 95500 -140221265 - THE1C-int LTR MaLR -1 1579 1269 283 100 0 83 chr10 95506 95566 -140221199 - L1PA10 LINE L1 -4 6164 6110 819 131 0 0 chr10 95576 95706 -140221059 - L1M2 LINE L1 -818 5473 5344 739 153 6 102 chr10 95705 95882 -140220883 + L1 LINE L1 3802 3961 -2185 * 456 196 140 0 chr10 96001 96108 -140220657 + L1 LINE L1 3975 4096 -2050 655 149 53 0 chr10 96108 96222 -140220543 - MSTB1 LTR MaLR 0 432 313 7497 126 8 68 chr10 96222 97647 -140219118 - THE1C-int LTR MaLR -299 1352 1 1684 145 99 34 chr10 97647 97999 -140218766 - THE1C LTR MaLR 0 375 1 1084 149 99 27 chr10 98270 98492 -140218273 + MER4B LTR ERV1 1 238 -372 10215 92 3 8 chr10 98494 98664 -140218101 - HERVL-A2 LTR ERVL -4306 1348 1179 2142 112 0 0 chr10 98664 98968 -140217797 - AluY SINE Alu -7 304 1 10215 92 3 8 chr10 98968 100152 -140216613 - HERVL-A2 LTR ERVL -4475 1179 1 2911 110 50 11 chr10 100152 100588 -140216177 - MLT2A2 LTR ERVL 0 453 1 2214 106 0 0 chr10 100755 101058 -140215707 - AluSx SINE Alu -9 303 1 23 78 0 0 chr10 101111 101162 -140215603 + AT_rich Low_complexity Low_complexity 1 51 0 1492 180 71 4 chr10 101166 101433 -140215332 + AluJb SINE Alu 4 288 -24 1310 194 110 68 chr10 101585 101940 -140214825 + MLT1A2 LTR MaLR 1 370 -4 239 316 61 10 chr10 102340 102438 -140214327 + MIR SINE MIR 82 184 -78 1797 150 83 107 chr10 102807 103057 -140213708 + MER4B LTR ERV1 3 239 -371 2331 82 0 7 chr10 103057 103361 -140213404 + AluY SINE Alu 10 311 0 1797 150 83 107 chr10 103361 103570 -140213195 + MER4B LTR ERV1 239 451 -159 2837 177 58 6 chr10 104006 104521 -140212244 - MER52A LTR ERV1 0 1755 1214 4907 192 76 14 chr10 104652 105913 -140210852 + L1MC1 LINE L1 570 1751 -4675 318 50 0 0 chr10 105913 105953 -140210812 + (TG)n Simple_repeat Simple_repeat 1 40 0 4907 192 76 14 chr10 105953 107120 -140209645 + L1MC1 LINE L1 1751 3246 -3180 4661 235 24 47 chr10 107116 107366 -140209399 + L1MC1 LINE L1 4164 4418 -2008 * 1840 184 16 27 chr10 107366 107735 -140209030 - MLT1A1 LTR MaLR 0 365 1 4661 235 24 47 chr10 107735 108967 -140207798 + L1MC1 LINE L1 4418 5612 -814 1221 183 48 28 chr10 108967 109219 -140207546 + AluJo SINE Alu 45 301 -11 4305 166 23 7 chr10 109222 109995 -140206770 + L1MC1 LINE L1 5595 6380 -233 1612 134 7 29 chr10 110499 110775 -140205990 + L1MC1 LINE L1 6056 6325 -8 2063 100 0 4 chr10 110804 111085 -140205680 + AluSq SINE Alu 30 309 -4 24 0 0 0 chr10 111236 111260 -140205505 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 43 32 chr10 112294 112388 -140204377 - L2 LINE L2 -291 2981 2887 427 298 16 8 chr10 112546 112670 -140204095 + L2 LINE L2 3189 3313 0 1072 245 14 34 chr10 113236 113587 -140203178 - L1MEc LINE L1 -4286 2110 1767 23 54 0 0 chr10 114071 114108 -140202657 + AT_rich Low_complexity Low_complexity 1 37 0 2180 99 0 7 chr10 115896 116190 -140200575 - AluSg SINE Alu -18 292 1 1770 154 7 3 chr10 116831 117116 -140199649 + AluSx SINE Alu 5 290 -22 1523 231 111 55 chr10 118676 119655 -140197110 - L1MC5 LINE L1 -449 7512 6476 2219 110 7 3 chr10 121026 121334 -140195431 + AluSq SINE Alu 5 313 0 586 200 0 8 chr10 121496 121626 -140195139 - AluSg/x SINE Alu -7 302 174 398 316 172 5 chr10 122413 122628 -140194137 - MIR SINE MIR 0 262 12 327 260 102 16 chr10 122716 122843 -140193922 - MIR SINE MIR -65 197 60 500 288 112 0 chr10 123292 123462 -140193303 - MIR SINE MIR -66 196 8 311 313 51 28 chr10 124113 124547 -140192218 - L1M4 LINE L1 -748 5398 4955 233 261 52 96 chr10 124715 124830 -140191935 + L2 LINE L2 3197 3306 -7 193 288 51 0 chr10 124913 124972 -140191793 + MIR SINE MIR 64 125 -83 1762 202 93 134 chr10 124985 125305 -140191460 - L1ME1 LINE L1 -88 6078 5747 1654 149 4 39 chr10 125305 125586 -140191179 - AluJb SINE Alu -21 291 21 559 138 0 0 chr10 125586 125673 -140191092 - AluJ/FLAM SINE Alu -225 87 1 1762 202 93 134 chr10 125673 126125 -140190640 - L1ME1 LINE L1 -417 5749 5254 437 351 69 48 chr10 126149 126568 -140190197 + HAL1 LINE L1 1236 1663 -844 640 241 73 5 chr10 126750 126941 -140189824 + L1ME3A LINE L1 5746 5949 -221 535 143 9 9 chr10 130544 130656 -140186109 + CT-rich Low_complexity Low_complexity 2 113 0 246 253 118 51 chr10 130700 130766 -140185999 - L1ME LINE L1 -213 5908 5848 1431 193 39 18 chr10 130766 131051 -140185714 - AluJb SINE Alu -21 291 1 246 253 118 51 chr10 131051 131162 -140185603 - L1ME LINE L1 -273 5848 5719 1239 127 0 0 chr10 131185 131350 -140185415 - AluJ SINE Alu -14 298 134 235 237 0 0 chr10 131484 131522 -140185243 - FLAM_C SINE Alu 0 170 133 180 0 0 0 chr10 131524 131544 -140185221 + (TG)n Simple_repeat Simple_repeat 2 21 0 535 104 72 13 chr10 131547 131771 -140184994 + (TA)n Simple_repeat Simple_repeat 1 237 0 803 154 24 0 chr10 131771 131894 -140184871 - FLAM_C SINE Alu -6 127 2 314 298 130 19 chr10 131946 132154 -140184611 - L1ME LINE L1 -479 5642 5412 189 0 0 0 chr10 132904 132925 -140183840 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr10 134374 134402 -140182363 + AT_rich Low_complexity Low_complexity 1 28 0 283 358 0 0 chr10 134432 134541 -140182224 + L1M4 LINE L1 4031 4139 -2007 366 293 37 16 chr10 134615 134803 -140181962 + L1M4 LINE L1 4334 4525 -1621 252 291 0 0 chr10 134841 134927 -140181838 + L1M4 LINE L1 4616 4701 -1445 296 331 37 25 chr10 135258 135421 -140181344 - L1MC/D LINE L1 -1983 5825 5661 348 246 129 75 chr10 135604 135884 -140180881 - L1 LINE L1 -1646 4500 4206 432 331 106 51 chr10 135973 136541 -140180224 - L1 LINE L1 -2139 4007 3409 1784 184 3 0 chr10 136727 137031 -140179734 + AluJb SINE Alu 1 305 -7 2278 91 0 0 chr10 137397 137684 -140179081 + AluSx SINE Alu 1 287 -25 21 0 0 0 chr10 138140 138161 -140178604 + AT_rich Low_complexity Low_complexity 1 21 0 6255 37 5 0 chr10 138161 138914 -140177851 - L1PA3 LINE L1 0 6155 5399 * 7906 31 5 0 chr10 138905 139866 -140176899 + L1PA3 LINE L1 4430 5395 -751 490 197 88 15 chr10 140139 140276 -140176489 - HAL1b LINE L1 -853 495 349 273 163 0 0 chr10 140322 140371 -140176394 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1767 123 12 108 chr10 142200 142533 -140174232 + AluJo SINE Alu 1 301 -11 445 311 41 18 chr10 143804 144012 -140172753 + MIR SINE MIR 3 209 -53 514 265 15 103 chr10 144439 144643 -140172122 + MER91B DNA MER1_type 4 189 -1 713 189 8 0 chr10 145645 145767 -140170998 + FLAM_A SINE Alu 1 123 -10 2025 149 0 0 chr10 146871 147173 -140169592 - AluJo SINE Alu -5 307 6 32 26 0 0 chr10 148180 148219 -140168546 + AT_rich Low_complexity Low_complexity 1 39 0 1727 146 79 7 chr10 148574 148854 -140167911 + AluSx SINE Alu 1 300 -12 757 296 71 0 chr10 148984 149224 -140167541 - MIR SINE MIR 0 262 6 2147 108 0 29 chr10 154355 154661 -140162104 - AluSx SINE Alu -15 297 1 180 125 0 0 chr10 154746 154778 -140161987 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1556 191 16 3 chr10 156666 156969 -140159796 - AluJo SINE Alu -5 307 1 355 241 259 0 chr10 157215 157381 -140159384 + MER3 DNA MER1_type 1 209 0 322 157 0 0 chr10 157342 157393 -140159372 - MER3 DNA MER1_type -123 86 36 * 311 297 78 99 chr10 161439 161516 -140155249 + MER5A DNA MER1_type 2 79 -110 2359 99 0 0 chr10 161516 161819 -140154946 + AluSg SINE Alu 3 305 -5 311 297 78 99 chr10 161819 161933 -140154832 + MER5A DNA MER1_type 79 189 0 224 330 187 0 chr10 162165 162256 -140154509 - L2 LINE L2 -8 3305 3198 1341 198 53 14 chr10 162276 162559 -140154206 + MER58B DNA MER1_type 48 341 0 389 259 9 36 chr10 164409 164521 -140152244 + MER5B DNA MER1_type 15 123 -55 397 259 103 73 chr10 164533 164765 -140152000 - L1ME2 LINE L1 -10 6154 5916 288 0 0 0 chr10 166300 166332 -140150433 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 70 23 93 chr10 166348 166391 -140150374 + L1MA8 LINE L1 6120 6159 -132 376 172 103 11 chr10 166393 166480 -140150285 + L1MA8 LINE L1 6191 6285 -6 * 437 266 87 17 chr10 166449 166690 -140150075 - L1MC4a LINE L1 -1341 6467 6210 1028 95 0 0 chr10 168682 168819 -140147946 + FLAM_C SINE Alu 1 137 -6 26 0 0 0 chr10 169592 169618 -140147147 + AT_rich Low_complexity Low_complexity 1 26 0 1846 152 10 3 chr10 169895 170191 -140146574 + AluJo SINE Alu 13 310 -2 2548 44 0 0 chr10 170290 170587 -140146178 + AluY SINE Alu 1 297 -14 30 0 0 0 chr10 171088 171118 -140145647 + AT_rich Low_complexity Low_complexity 1 30 0 1943 147 3 20 chr10 171242 171548 -140145217 + AluJb SINE Alu 1 301 -11 338 283 0 0 chr10 173802 173894 -140142871 + L1MC4 LINE L1 6610 6701 -1341 * 342 299 0 0 chr10 173827 173914 -140142851 - L1MC4 LINE L1 -1340 6702 6616 304 234 10 15 chr10 173923 174028 -140142737 + L1MC4 LINE L1 1995 6983 -1339 863 159 12 40 chr10 174032 174245 -140142520 - L1P4 LINE L1 -355 5801 5604 26 64 0 0 chr10 174281 174328 -140142437 + AT_rich Low_complexity Low_complexity 1 47 0 8205 84 5 7 chr10 175081 176199 -140140566 + L1P LINE L1 1655 2769 -3377 2448 62 0 13 chr10 176357 176661 -140140104 - AluY SINE Alu -11 300 1 23 54 0 0 chr10 176967 177004 -140139761 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr10 178230 178250 -140138515 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 179941 179968 -140136797 + (TCC)n Simple_repeat Simple_repeat 1 27 0 807 11 0 0 chr10 184647 184737 -140132028 - 5S rRNA rRNA -31 90 1 229 299 143 0 chr10 186821 186898 -140129867 + L2 LINE L2 3160 3247 -25 1965 211 70 2 chr10 187008 187496 -140129269 + L1MA9 LINE L1 5792 6312 0 717 191 140 0 chr10 189637 189773 -140126992 - AluJb SINE Alu -11 301 147 186 43 0 0 chr10 190281 190304 -140126461 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1128 237 110 52 chr10 190314 190761 -140126004 + MLT1J LTR MaLR 1 473 -38 1565 207 7 10 chr10 191807 192102 -140124663 - AluJb SINE Alu -18 294 1 2634 40 0 0 chr10 194899 195200 -140121565 - AluY SINE Alu -10 301 1 22 0 0 0 chr10 195482 195504 -140121261 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 0 chr10 196769 197064 -140119701 + AluSc SINE Alu 2 296 -13 2168 119 0 7 chr10 197729 198023 -140118742 - AluJb SINE Alu -19 293 2 234 167 37 19 chr10 198244 198298 -140118467 - MER5A DNA MER1_type -122 67 13 364 228 20 30 chr10 199739 199840 -140116925 + MIR SINE MIR 162 261 -1 2264 90 0 0 chr10 200131 200419 -140116346 + AluY SINE Alu 1 288 -23 24 77 0 0 chr10 200721 200773 -140115992 + AT_rich Low_complexity Low_complexity 1 52 0 248 323 156 49 chr10 202127 202390 -140114375 + L2 LINE L2 2894 3184 -88 423 152 0 0 chr10 203060 203126 -140113639 - MADE1 DNA Mariner -14 66 1 528 240 14 4 chr10 206559 206768 -140109997 - MER65C LTR ERV1 -159 302 1 826 201 0 13 chr10 206827 206981 -140109784 + FRAM SINE Alu 1 152 -14 1391 201 47 0 chr10 209273 209552 -140107213 + AluJb SINE Alu 21 312 0 23 0 0 0 chr10 209643 209666 -140107099 + AT_rich Low_complexity Low_complexity 1 23 0 1226 133 55 62 chr10 209688 210030 -140106735 + L1MA5A LINE L1 5083 5427 -743 580 165 0 10 chr10 210043 210146 -140106619 - MER41B LTR ERV1 -88 547 446 1225 112 0 51 chr10 210146 210208 -140106557 + L1MA5A LINE L1 5413 5477 -820 2425 71 0 0 chr10 210208 210518 -140106247 + AluY SINE Alu 1 310 -1 1225 112 0 51 chr10 210518 210652 -140106113 + L1MA5A LINE L1 5477 5599 -698 796 115 0 18 chr10 210658 210771 -140105994 + AluSg SINE Alu 37 147 -163 3399 46 2 0 chr10 210771 211202 -140105563 - L1PA5 LINE L1 -748 5398 4967 6157 51 0 0 chr10 211202 211946 -140104819 + L1PA5 LINE L1 5410 6154 0 968 99 56 0 chr10 211946 212113 -140104652 + AluSg SINE Alu 134 308 0 294 29 0 0 chr10 212132 212167 -140104598 + (CA)n Simple_repeat Simple_repeat 1 35 0 3365 169 75 5 chr10 212168 212823 -140103942 + L1MA5A LINE L1 5596 6296 -1 1552 250 136 8 chr10 212824 213420 -140103345 - L1MC3 LINE L1 -3 7782 7111 895 238 117 67 chr10 213895 214357 -140102408 - L1MC4 LINE L1 -6 8036 7552 22 0 0 0 chr10 214368 214390 -140102375 + AT_rich Low_complexity Low_complexity 1 22 0 3486 186 49 47 chr10 214390 215415 -140101350 + L1MB3 LINE L1 4985 6028 -155 180 320 0 13 chr10 215896 215974 -140100791 - L2 LINE L2 -1279 2035 1959 378 328 143 0 chr10 217069 217258 -140099507 - MIR SINE MIR -16 246 31 1510 237 105 5 chr10 217418 217819 -140098946 - Tigger3b DNA MER2_type 0 1231 791 245 222 19 0 chr10 217915 217969 -140098796 - Tigger3b DNA MER2_type -386 845 791 * 270 178 0 0 chr10 217966 218011 -140098754 - Tigger3b DNA MER2_type -386 846 802 2822 193 97 50 chr10 218172 218396 -140098369 - Tigger3b DNA MER2_type -2184 844 632 2380 78 3 0 chr10 218396 218705 -140098060 - AluSp SINE Alu -3 310 1 2822 193 97 50 chr10 218705 219285 -140097480 - Tigger3b DNA MER2_type -2396 632 2 204 320 51 0 chr10 219408 219486 -140097279 + (CATG)n Simple_repeat Simple_repeat 1 82 0 376 255 27 20 chr10 219537 219686 -140097079 + (CA)n Simple_repeat Simple_repeat 1 150 0 319 320 11 22 chr10 220047 220225 -140096540 + (CA)n Simple_repeat Simple_repeat 1 176 0 1488 203 0 7 chr10 220530 220811 -140095954 - AluJo SINE Alu -20 292 14 29 0 0 0 chr10 220848 220877 -140095888 + AT_rich Low_complexity Low_complexity 1 29 0 1710 193 97 0 chr10 221751 222124 -140094641 + MSTB1 LTR MaLR 24 432 0 297 248 116 16 chr10 223758 223879 -140092886 - MER20 DNA MER1_type -60 159 27 1886 136 27 0 chr10 224431 224725 -140092040 - AluSx SINE Alu -10 302 1 1538 195 82 0 chr10 228282 228600 -140088165 - MER2 DNA MER2_type 0 344 1 831 208 72 22 chr10 229537 229804 -140086961 - MLT1A1 LTR MaLR -7 367 1 492 303 123 44 chr10 230010 230350 -140086415 - L1MCc LINE L1 -4410 2712 2346 644 287 82 51 chr10 230481 231114 -140085651 - L1MCc LINE L1 -4887 1536 1252 331 317 127 17 chr10 231583 231883 -140084882 - L1MCc LINE L1 -6074 349 17 22 0 0 0 chr10 231885 231907 -140084858 + AT_rich Low_complexity Low_complexity 1 22 0 320 284 23 0 chr10 232117 232205 -140084560 + MER58 DNA MER1_type 177 266 -2154 1941 133 0 29 chr10 233717 234026 -140082739 - AluSx SINE Alu -12 300 1 1851 110 0 4 chr10 235076 235339 -140081426 + AluSg SINE Alu 36 297 -13 843 152 0 14 chr10 235450 235595 -140081170 + FLAM_C SINE Alu 1 143 0 305 212 169 8 chr10 237441 237559 -140079206 + L1ME4a LINE L1 5985 6121 0 2040 121 0 0 chr10 238798 239103 -140077662 + AluY SINE Alu 1 305 -6 1820 131 12 44 chr10 239714 240034 -140076731 + AluJb SINE Alu 1 310 -2 679 195 0 17 chr10 241396 241514 -140075251 - FLAM_A SINE Alu -17 116 1 489 151 244 34 chr10 243859 243978 -140072787 + MER58A DNA MER1_type 46 189 -35 600 209 118 13 chr10 244536 244689 -140072076 - MER20 DNA MER1_type -9 210 42 568 252 167 9 chr10 244689 244899 -140071866 - L2 LINE L2 -1366 1948 1706 24 0 0 0 chr10 245507 245531 -140071234 + AT_rich Low_complexity Low_complexity 1 24 0 2066 93 3 23 chr10 248103 248404 -140068361 + AluSx SINE Alu 1 295 -17 190 380 120 9 chr10 248836 248944 -140067821 - MIR SINE MIR -141 121 2 380 159 439 8 chr10 249167 249299 -140067466 - MER5A DNA MER1_type 0 189 1 367 235 161 37 chr10 249525 249687 -140067078 - MER5A DNA MER1_type 0 189 8 854 197 175 11 chr10 249758 250027 -140066738 - MER33 DNA MER1_type 0 324 12 269 282 27 45 chr10 250609 250719 -140066046 - L2 LINE L2 -24 3289 3182 203 273 0 0 chr10 251440 251484 -140065281 + (TATG)n Simple_repeat Simple_repeat 4 47 0 742 186 0 0 chr10 251544 251668 -140065097 + FLAM_C SINE Alu 5 128 -5 3003 163 61 40 chr10 252292 252919 -140063846 - LTR49-int LTR ERV1 -3127 3204 2565 2404 82 0 25 chr10 252924 253243 -140063522 + AluY SINE Alu 1 311 0 2133 127 14 0 chr10 253271 253563 -140063202 - AluSg1 SINE Alu -13 296 1 1764 227 52 22 chr10 253563 254070 -140062695 - LTR49-int LTR ERV1 -3858 2473 1517 601 150 74 104 chr10 254144 254298 -140062467 - LTR49-int LTR ERV1 -2645 2235 2078 2062 113 46 0 chr10 254298 254580 -140062185 + AluSc SINE Alu 3 297 -12 601 150 74 104 chr10 254580 254671 -140062094 - LTR49-int LTR ERV1 -2802 2078 1501 250 146 0 36 chr10 254670 254725 -140062040 - LTR49-int LTR ERV1 -4996 1335 1283 * 254 268 42 0 chr10 254725 254796 -140061969 - tRNA-Glu-GAG tRNA tRNA 0 75 2 261 244 13 13 chr10 254818 254896 -140061869 - LTR49-int LTR ERV1 -5138 1193 1116 322 172 0 31 chr10 255022 255086 -140061679 - LTR49-int LTR ERV1 -3690 1181 1120 3244 134 10 4 chr10 255839 256333 -140060432 - LOR1a LTR ERV1 0 497 1 1330 157 19 83 chr10 256504 256637 -140060128 - LTR56 LTR ERV1 -1 444 304 2307 128 0 0 chr10 256637 256949 -140059816 - AluSx SINE Alu 0 312 1 1330 157 19 83 chr10 256949 257127 -140059638 - LTR56 LTR ERV1 -141 304 153 888 198 20 20 chr10 258068 258270 -140058495 - LTR56 LTR ERV1 -234 211 10 7473 37 6 7 chr10 258271 259491 -140057274 + L1PA5 LINE L1 4932 6151 -3 439 191 64 0 chr10 259502 259612 -140057153 - LTR37A LTR ERV1 -264 162 46 449 262 162 80 chr10 259698 260339 -140056426 + L1MC4a LINE L1 5326 6019 -1789 945 260 60 0 chr10 261718 261999 -140054766 + MER58B DNA MER1_type 34 331 -10 275 327 27 9 chr10 262661 262771 -140053994 - MER5A DNA MER1_type -74 115 4 2108 128 3 0 chr10 264832 265129 -140051636 + AluSc SINE Alu 1 298 -11 529 308 174 49 chr10 368608 369219 -139947546 + HAL1 LINE L1 1417 2103 -404 24 96 0 0 chr10 370491 370564 -139946201 + AT_rich Low_complexity Low_complexity 1 73 0 1214 115 6 22 chr10 371568 371751 -139945014 + AluSq SINE Alu 124 303 -10 257 250 15 15 chr10 372651 372719 -139944046 - MIR SINE MIR -114 148 81 319 296 30 24 chr10 373299 373468 -139943297 + (TCTA)n Simple_repeat Simple_repeat 3 172 0 284 318 34 0 chr10 373513 373601 -139943164 + L2 LINE L2 3182 3272 -41 208 403 86 0 chr10 373641 373827 -139942938 - L2 LINE L2 -457 2857 2656 2262 123 0 0 chr10 373885 374186 -139942579 + AluSx SINE Alu 1 301 -11 2125 108 3 48 chr10 374709 375023 -139941742 - AluSp SINE Alu -13 300 1 2727 87 0 3 chr10 375543 375923 -139940842 - L1PA7 LINE L1 -7 6147 5769 1877 85 60 0 chr10 375927 375959 -139940806 - L1P5 LINE L1 -334 5822 5793 16146 31 3 0 chr10 375959 378732 -139938033 - L1PA2 LINE L1 -2 6153 3372 1877 85 60 0 chr10 378732 379000 -139937765 - L1P5 LINE L1 -363 5793 5498 2059 144 3 7 chr10 379570 379875 -139936890 - AluSg SINE Alu -6 304 1 1810 150 28 0 chr10 384064 384350 -139932415 - AluJo SINE Alu -18 294 1 2561 68 10 0 chr10 387809 388117 -139928648 - AluY SINE Alu 0 311 1 193 279 15 29 chr10 388645 388713 -139928052 - MIR SINE MIR -118 144 78 246 67 133 0 chr10 392807 392852 -139923913 + Alu SINE Alu 238 288 -14 2750 209 39 46 chr10 394981 395697 -139921068 + L1MA9 LINE L1 5495 6205 -107 653 227 85 0 chr10 395842 396018 -139920747 + MER2 DNA MER2_type 1 191 -154 238 279 58 0 chr10 396241 396327 -139920438 + MER2 DNA MER2_type 101 191 -154 248 260 52 0 chr10 396639 396716 -139920049 + MER2 DNA MER2_type 101 181 -164 280 264 46 0 chr10 396880 396967 -139919798 + MER2 DNA MER2_type 101 191 -154 251 263 66 0 chr10 396960 397036 -139919729 + MER2 DNA MER2_type 101 181 -164 * 781 245 46 33 chr10 397039 397084 -139919681 + MER2 DNA MER2_type 101 144 -201 2198 103 0 3 chr10 397084 397366 -139919399 + AluY SINE Alu 1 281 -30 180 0 0 0 chr10 397368 397388 -139919377 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 781 245 46 33 chr10 397388 397580 -139919185 + MER2 DNA MER2_type 144 344 -1 1704 176 25 0 chr10 398123 398407 -139918358 - AluJb SINE Alu -21 291 1 942 167 12 153 chr10 399588 400037 -139916728 - THE1B LTR MaLR 0 364 1 180 217 87 0 chr10 400767 400813 -139915952 - L2 LINE L2 -2 3311 3262 314 314 34 17 chr10 401984 402102 -139914663 - L2 LINE L2 0 3313 3194 1770 180 18 7 chr10 402104 402388 -139914377 + AluJb SINE Alu 1 287 -25 464 299 61 30 chr10 402590 402754 -139914011 + L1M4 LINE L1 2921 3089 -3057 472 319 91 7 chr10 402769 403172 -139913593 + L1M4 LINE L1 4160 4607 -1539 226 235 99 0 chr10 403562 403643 -139913122 + L1M LINE L1 5301 5389 -970 231 36 0 0 chr10 405212 405240 -139911525 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 317 222 103 34 chr10 409544 409661 -139907104 - MIR SINE MIR -115 147 23 263 324 131 14 chr10 410374 410519 -139906246 - MIR SINE MIR -1 261 100 1632 158 9 85 chr10 412519 412848 -139903917 + AluJb SINE Alu 1 304 -8 2171 122 6 16 chr10 412875 413186 -139903579 + AluSq SINE Alu 1 308 -5 1967 159 3 7 chr10 415682 415991 -139900774 + AluSx SINE Alu 1 308 -4 348 117 39 0 chr10 416582 416659 -139900106 + G-rich Low_complexity Low_complexity 1 80 0 1070 206 81 12 chr10 418692 419012 -139897753 + MLT1A1 LTR MaLR 23 364 -1 184 266 47 0 chr10 421748 421812 -139894953 + MIR SINE MIR 45 111 -97 3886 242 67 1 chr10 422029 423084 -139893681 - L1MC1 LINE L1 -1 6332 5208 244 304 20 0 chr10 424684 424786 -139891979 + (TA)n Simple_repeat Simple_repeat 1 104 0 223 200 246 0 chr10 426098 426208 -139890557 - MER5A DNA MER1_type -18 171 35 230 289 60 0 chr10 428326 428409 -139888356 + MLT1J LTR MaLR 346 433 -78 743 173 7 14 chr10 430048 430187 -139886578 - AluJb SINE Alu -19 293 156 960 134 0 0 chr10 430802 430936 -139885829 + FLAM_C SINE Alu 6 139 -4 244 114 23 23 chr10 431001 431045 -139885720 + MER101B LTR ERV1 13 56 -514 642 273 84 8 chr10 431247 431485 -139885280 + LTR51 LTR ERV1 228 483 -188 369 316 0 0 chr10 432820 433057 -139883708 + GA-rich Low_complexity Low_complexity 1 237 0 699 166 0 64 chr10 433064 433281 -139883484 - AluJb SINE Alu -36 276 1 767 157 40 26 chr10 433801 434029 -139882736 + MER4A LTR ERV1 1 303 -361 363 140 10 194 chr10 434035 434166 -139882599 + MER4B LTR ERV1 517 610 0 2914 13 0 0 chr10 434927 435237 -139881528 - AluYb8 SINE Alu -8 310 1 816 262 112 29 chr10 436267 436652 -139880113 - MLT1C LTR MaLR -4 463 47 257 241 108 0 chr10 436784 436867 -139879898 - MLT1C LTR MaLR -366 101 10 1978 132 10 3 chr10 438055 438351 -139878414 - AluSx SINE Alu -14 298 1 1505 189 22 11 chr10 438429 438704 -139878061 - AluJo SINE Alu -22 290 13 1216 241 89 0 chr10 439523 439826 -139876939 - MER2 DNA MER2_type -14 331 2 567 212 196 6 chr10 440806 440985 -139875780 + L1MB3 LINE L1 5970 6182 -1 975 260 19 11 chr10 443987 444256 -139872509 - L1MB7 LINE L1 -19 6165 5895 2257 207 105 25 chr10 444459 445256 -139871509 - L1MB7 LINE L1 -274 5904 5020 987 210 75 68 chr10 445256 445399 -139871366 + MLT1B LTR MaLR 1 141 -249 2056 125 57 0 chr10 445399 445695 -139871070 - AluSq SINE Alu 0 313 1 987 210 75 68 chr10 445695 445936 -139870829 + MLT1B LTR MaLR 141 388 -2 2257 207 105 25 chr10 445936 446057 -139870708 - L1MB7 LINE L1 -1158 5020 4910 331 167 121 0 chr10 446161 446227 -139870538 - Charlie1 DNA MER1_type 0 2761 2688 2091 127 13 16 chr10 446234 446542 -139870223 + AluSx SINE Alu 1 307 -5 1347 292 155 4 chr10 446542 447278 -139869487 - Charlie1 DNA MER1_type -150 2611 1765 267 168 20 10 chr10 448684 448785 -139867980 + (CAGG)n Simple_repeat Simple_repeat 2 103 0 243 0 0 0 chr10 449151 449178 -139867587 + (A)n Simple_repeat Simple_repeat 1 27 0 416 280 40 40 chr10 449443 449618 -139867147 - MER106A DNA MER1_type -16 220 46 434 245 83 31 chr10 450210 450246 -139866519 - MER3 DNA MER1_type -1 208 175 2198 129 7 0 chr10 450246 450549 -139866216 - AluSx SINE Alu -7 305 1 434 245 83 31 chr10 450549 450704 -139866061 - MER3 DNA MER1_type -34 175 7 2349 83 3 0 chr10 452808 453096 -139863669 + AluY SINE Alu 1 289 -22 184 321 19 0 chr10 455911 455964 -139860801 + MER5A DNA MER1_type 67 120 -69 247 252 28 19 chr10 459117 459224 -139857541 + CT-rich Low_complexity Low_complexity 2 109 0 2234 164 108 24 chr10 459868 460427 -139856338 + MER4B LTR ERV1 1 903 0 2372 238 81 49 chr10 462624 463456 -139853309 + Cheshire DNA MER1_type 509 1366 -1054 459 248 153 0 chr10 463544 463681 -139853084 - L1MEc LINE L1 -6201 195 38 443 328 66 6 chr10 463725 463908 -139852857 + MIR SINE MIR 48 241 -21 251 284 31 102 chr10 466214 466341 -139850424 + MER5A DNA MER1_type 9 126 -52 1948 130 0 11 chr10 466347 466617 -139850148 - AluSg SINE Alu -7 303 37 1735 156 43 0 chr10 466811 467093 -139849672 - AluSx SINE Alu -18 294 1 2718 36 3 0 chr10 467649 467955 -139848810 + AluY SINE Alu 1 307 -4 266 234 52 0 chr10 468312 468389 -139848376 + MER58C DNA MER1_type 117 197 -18 232 323 83 0 chr10 469389 469485 -139847280 - MIR SINE MIR -58 204 101 378 242 24 24 chr10 470597 470721 -139846044 + CT-rich Low_complexity Low_complexity 4 127 0 1723 170 0 3 chr10 472578 472861 -139843904 - AluJb SINE Alu -25 287 6 1807 154 7 36 chr10 475783 476089 -139840676 + AluSx SINE Alu 1 297 -15 203 114 23 0 chr10 476948 476992 -139839773 + T-rich Low_complexity Low_complexity 3 47 0 266 254 10 83 chr10 477862 478055 -139838710 + (CATA)n Simple_repeat Simple_repeat 1 179 0 288 287 25 32 chr10 478347 478504 -139838261 + (CATA)n Simple_repeat Simple_repeat 3 158 0 266 297 22 33 chr10 478570 478752 -139838013 + (CATA)n Simple_repeat Simple_repeat 1 180 0 329 253 28 55 chr10 478862 479044 -139837721 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 355 251 40 29 chr10 478923 479098 -139837667 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 346 264 22 50 chr10 479220 479402 -139837363 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 246 325 24 30 chr10 479343 479509 -139837256 + (TATG)n Simple_repeat Simple_repeat 1 165 0 * 300 314 23 29 chr10 479521 479696 -139837069 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 208 307 12 49 chr10 479665 479828 -139836937 + (CATA)n Simple_repeat Simple_repeat 1 157 0 * 1392 156 59 103 chr10 481028 481368 -139835397 - MER1B DNA MER1_type 0 339 15 1209 183 0 9 chr10 481542 481761 -139835004 + AluJo SINE Alu 89 305 -7 230 143 0 36 chr10 484814 484870 -139831895 - L1MA4 LINE L1 -295 6005 5952 235 321 36 0 chr10 486448 486532 -139830233 + MIR SINE MIR 86 172 -90 210 325 37 0 chr10 487262 487425 -139829340 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 1079 296 83 33 chr10 487968 488761 -139828004 - L1ME LINE L1 -465 5699 4863 2261 101 0 10 chr10 490274 490580 -139826185 - AluSx SINE Alu -9 303 1 307 273 84 56 chr10 491560 491703 -139825062 + L1ME2 LINE L1 5731 5877 -289 270 111 44 0 chr10 492231 492276 -139824489 + Alu SINE Alu 1 47 -254 199 271 9 75 chr10 492648 492755 -139824010 + L2 LINE L2 2994 3093 -179 240 319 129 0 chr10 492926 493042 -139823723 + L2 LINE L2 3133 3263 -9 337 228 13 0 chr10 494466 494545 -139822220 - MER116 DNA Mariner 0 80 1 666 234 119 23 chr10 494775 494993 -139821772 + MER8 DNA MER2_type 1 239 0 2180 107 47 0 chr10 495383 495681 -139821084 + AluSq SINE Alu 2 313 0 667 284 147 29 chr10 496102 496552 -139820213 + MLT2B2 LTR ERVL 9 511 -4 224 267 0 0 chr10 497696 497756 -139819009 + C-rich Low_complexity Low_complexity 2 61 0 971 258 192 2 chr10 500858 501312 -139815453 - MER92B LTR ERV1 -96 540 1 769 232 135 12 chr10 501546 501805 -139814960 + MLT1A1 LTR MaLR 2 292 -73 958 110 0 7 chr10 502349 502485 -139814280 + AluSg/x SINE Alu 175 309 -1 272 164 119 0 chr10 502873 502952 -139813813 - MLT1D LTR MaLR 0 505 464 228 274 71 0 chr10 503033 503146 -139813619 + (CCCCAG)n Simple_repeat Simple_repeat 4 124 0 216 0 0 0 chr10 504979 505003 -139811762 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 746 146 132 6 chr10 506756 506961 -139809804 - MER61D LTR ERV1 -216 218 1 245 215 11 0 chr10 506973 507066 -139809699 + (TATAG)n Simple_repeat Simple_repeat 1 94 0 2115 122 3 3 chr10 508440 508752 -139808013 - AluSx SINE Alu 0 312 1 953 238 36 0 chr10 509815 510038 -139806727 - MER8 DNA MER2_type 0 239 9 351 310 0 26 chr10 516711 516824 -139799941 - HAL1b LINE L1 -863 485 376 2302 78 3 3 chr10 518379 518685 -139798080 - AluY SINE Alu -5 306 1 1934 107 7 52 chr10 518687 518996 -139797769 - AluSx SINE Alu -17 295 1 276 254 82 45 chr10 519546 519680 -139797085 + MER5A DNA MER1_type 51 189 0 1554 142 38 11 chr10 519871 520138 -139796627 - AluJo SINE Alu -6 306 33 431 345 0 0 chr10 521162 521339 -139795426 + C-rich Low_complexity Low_complexity 2 178 0 192 305 105 11 chr10 522105 522200 -139794565 + MIR SINE MIR 68 171 -91 1668 188 47 9 chr10 524240 524580 -139792185 + MLT1A1 LTR MaLR 13 365 0 294 236 0 42 chr10 524587 524659 -139792106 + MLT1A1 LTR MaLR 297 365 0 283 250 0 42 chr10 524666 524738 -139792027 + MLT1A1 LTR MaLR 297 365 0 291 307 24 8 chr10 525494 525621 -139791144 + L1MC4 LINE L1 7914 8042 0 1395 127 5 5 chr10 527136 527348 -139789417 - AluSq SINE Alu 0 313 102 29 28 0 0 chr10 530682 530718 -139786047 + AT_rich Low_complexity Low_complexity 1 36 0 234 343 0 0 chr10 531809 531882 -139784883 - MIR3 SINE MIR -12 196 124 240 167 179 12 chr10 533010 533094 -139783671 + MER20 DNA MER1_type 67 164 -55 594 234 60 43 chr10 533480 533664 -139783101 - LTR55 LTR ERV -361 187 1 266 316 105 7 chr10 533735 533887 -139782878 + MIR SINE MIR 51 217 -45 247 265 0 33 chr10 538176 538457 -139778308 + CT-rich Low_complexity Low_complexity 1 271 0 216 324 29 0 chr10 539040 539108 -139777657 + L2 LINE L2 3195 3264 -8 182 211 26 0 chr10 540156 540194 -139776571 - L3b LINE CR1 -123 1460 1422 187 354 152 15 chr10 540231 540429 -139776336 - L3b LINE CR1 -250 1333 1109 295 214 14 28 chr10 544211 544356 -139772409 + (TATG)n Simple_repeat Simple_repeat 4 146 0 394 273 48 12 chr10 544392 544557 -139772208 + (TATG)n Simple_repeat Simple_repeat 2 172 0 266 180 16 0 chr10 544590 544651 -139772114 + (TG)n Simple_repeat Simple_repeat 1 62 0 210 367 0 0 chr10 545200 545377 -139771388 + (CCCCAG)n Simple_repeat Simple_repeat 4 180 0 200 246 35 0 chr10 547218 547275 -139769490 + (AATAG)n Simple_repeat Simple_repeat 1 59 0 24607 92 22 3 chr10 547424 551322 -139765443 - L1P3 LINE L1 -673 5499 1527 298 325 62 19 chr10 552571 552780 -139763985 + Charlie1 DNA MER1_type 20 237 -2524 * 357 273 94 0 chr10 552766 552894 -139763871 + Charlie1 DNA MER1_type 2622 2761 0 1586 176 20 3 chr10 554064 554359 -139762406 + AluJo SINE Alu 1 300 -12 497 348 86 0 chr10 554506 554693 -139762072 + L1M4 LINE L1 2946 3148 -2998 551 252 32 13 chr10 554706 554861 -139761904 + L1MCa LINE L1 19 176 -6250 * 569 197 61 0 chr10 554859 554991 -139761774 + L1MCa LINE L1 988 1127 -5299 287 208 69 0 chr10 554978 555050 -139761715 + L1MCa LINE L1 1857 1933 -4493 * 242 296 82 10 chr10 555744 555842 -139760923 - MIR SINE MIR -65 197 93 387 216 0 34 chr10 559247 559335 -139757430 - Tigger5 DNA MER2_type -3 2320 2236 232 260 41 27 chr10 559393 559466 -139757299 - Tigger5 DNA MER2_type -2249 74 1 368 201 88 0 chr10 560276 560435 -139756330 + (CA)n Simple_repeat Simple_repeat 2 174 0 299 186 32 85 chr10 560346 560534 -139756231 + (CACAA)n Simple_repeat Simple_repeat 2 179 0 * 368 355 0 0 chr10 561933 562040 -139754725 + (CA)n Simple_repeat Simple_repeat 1 107 0 543 276 0 0 chr10 562065 562235 -139754530 + (CA)n Simple_repeat Simple_repeat 1 170 0 423 316 60 57 chr10 563008 563290 -139753475 - L1MC/D LINE L1 -2222 5586 5304 2095 120 11 0 chr10 564156 564440 -139752325 + AluSx SINE Alu 1 287 -25 751 325 21 23 chr10 564510 564894 -139751871 + L1MEc LINE L1 1627 2009 -4387 350 365 72 51 chr10 564958 565251 -139751514 + L1MDa LINE L1 51 349 -6191 343 244 194 49 chr10 565411 565735 -139751030 - L1M2 LINE L1 -5723 1126 756 24 0 0 0 chr10 566540 566564 -139750201 + AT_rich Low_complexity Low_complexity 1 24 0 2465 87 0 3 chr10 568718 569029 -139747736 + AluSq SINE Alu 1 310 -3 402 21 0 0 chr10 569029 569076 -139747689 + (TA)n Simple_repeat Simple_repeat 1 47 0 180 0 0 0 chr10 569520 569540 -139747225 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2081 131 10 0 chr10 569549 569846 -139746919 + AluSx SINE Alu 3 302 -10 2292 99 0 7 chr10 574087 574379 -139742386 + AluSg SINE Alu 1 290 -20 303 28 0 0 chr10 574379 574415 -139742350 + (TA)n Simple_repeat Simple_repeat 2 37 0 2287 109 0 3 chr10 580622 580926 -139735839 - AluSx SINE Alu -9 303 1 264 54 0 27 chr10 580967 581004 -139735761 + U6 snRNA snRNA 1 36 -71 1355 219 61 48 chr10 581013 581080 -139735685 - MLT1C LTR MaLR 0 467 402 1409 174 77 43 chr10 581080 581379 -139735386 + AluJo SINE Alu 1 309 -3 1355 219 61 48 chr10 581379 581772 -139734993 - MLT1C LTR MaLR -65 402 1 234 247 26 13 chr10 582558 582712 -139734053 + (TG)n Simple_repeat Simple_repeat 1 156 0 317 269 150 57 chr10 582932 583125 -139733640 + HAL1 LINE L1 1912 2122 -385 413 248 113 28 chr10 583133 583274 -139733491 - L1ME LINE L1 -4142 2254 2102 1264 292 112 45 chr10 583289 584339 -139732426 - L1ME LINE L1 -4452 1944 765 4210 126 31 19 chr10 584339 584508 -139732257 - L1MA3 LINE L1 0 6305 6140 2297 103 3 3 chr10 584508 584808 -139731957 - AluSq SINE Alu -9 304 5 4210 126 31 19 chr10 584808 585368 -139731397 - L1MA3 LINE L1 -165 6140 5567 1264 292 112 45 chr10 585368 585475 -139731290 - L1ME LINE L1 -5631 765 667 316 309 78 78 chr10 585812 586042 -139730723 - L1ME LINE L1 -5992 404 175 2115 155 0 0 chr10 586077 586387 -139730378 - AluSg SINE Alu 0 310 1 429 210 89 85 chr10 586591 586852 -139729913 + HAL1 LINE L1 1860 2243 -264 972 121 0 0 chr10 586852 586984 -139729781 + FLAM_C SINE Alu 1 132 -1 429 210 89 85 chr10 586984 587088 -139729677 + HAL1 LINE L1 2243 2345 -162 2565 84 0 0 chr10 587091 587402 -139729363 + AluY SINE Alu 1 311 0 303 254 25 82 chr10 587695 587817 -139728948 - L1ME3 LINE L1 -83 6062 5948 394 215 91 59 chr10 587865 588099 -139728666 - L1ME2 LINE L1 -214 5939 5682 705 268 59 74 chr10 588218 588878 -139727887 - L1ME2 LINE L1 -1317 4812 4163 3506 226 121 15 chr10 588881 589905 -139726860 - MSTD-int LTR MaLR -601 1134 2 641 114 5 0 chr10 589915 590019 -139726746 - ALR/Alpha Satellite centromeric -20 151 47 1571 149 221 0 chr10 590019 590327 -139726438 - MSTD LTR MaLR -20 376 1 224 196 0 39 chr10 590529 590580 -139726185 + A-rich Low_complexity Low_complexity 2 50 0 1262 283 78 60 chr10 590777 591060 -139725705 - L1ME2 LINE L1 -2406 3723 3447 929 73 0 22 chr10 591060 591196 -139725569 - L1PA4 LINE L1 0 6155 6023 1262 283 78 60 chr10 591196 592313 -139724452 - L1ME2 LINE L1 -2682 3447 2297 471 268 63 123 chr10 592326 592471 -139724294 - L1ME2 LINE L1 -5073 1046 894 1579 186 0 11 chr10 592471 592735 -139724030 - AluJo SINE Alu -51 261 1 471 268 63 123 chr10 592735 592940 -139723825 - L1ME2 LINE L1 -5225 894 717 306 295 72 66 chr10 593125 593291 -139723474 - L1ME2 LINE L1 -5508 611 445 1389 159 4 35 chr10 593669 593816 -139722949 + AluJb SINE Alu 1 140 -172 2563 100 22 14 chr10 593816 594177 -139722588 + THE1B LTR MaLR 1 364 0 1389 159 4 35 chr10 594177 594261 -139722504 + AluJb SINE Alu 140 225 -87 232 254 0 0 chr10 594261 594320 -139722445 + AluSg/x SINE Alu 178 236 -66 647 200 0 33 chr10 594354 594474 -139722291 + AluSg/x SINE Alu 173 288 -21 286 263 106 73 chr10 594832 595011 -139721754 - MIR3 SINE MIR -1 207 23 330 325 132 15 chr10 595461 595658 -139721107 - L1ME3A LINE L1 -28 6142 5923 906 127 0 0 chr10 595747 595873 -139720892 - FLAM_C SINE Alu -17 126 1 1075 294 54 43 chr10 595881 596740 -139720025 - L1ME3A LINE L1 -264 5906 5032 539 272 83 74 chr10 596788 597355 -139719410 + L1ME LINE L1 24 595 -5475 449 364 79 38 chr10 597504 597564 -139719201 - L1ME3A LINE L1 -1123 5023 4967 2109 123 13 7 chr10 597564 597874 -139718891 - AluSx SINE Alu 0 312 1 449 364 79 38 chr10 597874 598258 -139718507 - L1ME3A LINE L1 -1179 4967 4561 1402 307 74 33 chr10 598323 598474 -139718291 - L1ME3A LINE L1 -1611 4535 4392 2156 124 0 0 chr10 598474 598765 -139718000 - AluSc SINE Alu -18 291 1 1402 307 74 33 chr10 598765 599544 -139717221 - L1ME3A LINE L1 -1754 4392 3567 2155 109 0 0 chr10 601407 601682 -139715083 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 601685 601705 -139715060 + (TAA)n Simple_repeat Simple_repeat 2 21 0 186 196 59 0 chr10 602956 603007 -139713758 + L2 LINE L2 3255 3308 -5 23 0 0 0 chr10 603192 603215 -139713550 + AT_rich Low_complexity Low_complexity 1 23 0 458 239 43 0 chr10 603482 603599 -139713166 + L1 LINE L1 5113 5234 -912 * 2763 23 0 0 chr10 603599 603900 -139712865 - AluY SINE Alu -10 301 1 763 185 53 21 chr10 603900 604079 -139712686 + L1MA9 LINE L1 6125 6312 0 311 315 19 9 chr10 604248 604356 -139712409 - L1ME LINE L1 -382 5739 5631 403 321 46 8 chr10 605063 605194 -139711571 - L2 LINE L2 -1 3271 3136 333 283 20 30 chr10 606263 606362 -139710403 - L2 LINE L2 -1 3271 3174 1999 104 11 11 chr10 606631 606761 -139710004 + AluSq SINE Alu 4 281 -32 2168 137 12 41 chr10 606761 607213 -139709552 + AluSp SINE Alu 1 309 -4 194 0 39 0 chr10 607213 607239 -139709526 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 240 345 0 47 chr10 608554 608725 -139708040 + (CCCA)n Simple_repeat Simple_repeat 3 165 0 360 307 0 45 chr10 608740 608916 -139707849 + (CCCA)n Simple_repeat Simple_repeat 3 170 0 2010 138 6 3 chr10 610073 610384 -139706381 + AluSx SINE Alu 1 312 0 372 295 35 0 chr10 610786 610959 -139705806 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 382 278 35 0 chr10 611045 611218 -139705547 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 232 347 13 0 chr10 611278 611353 -139705412 - MER91B DNA MER1_type -60 130 55 2406 75 0 0 chr10 612094 612399 -139704366 - AluSc SINE Alu -4 305 1 1801 195 7 0 chr10 613381 613688 -139703077 + AluJo SINE Alu 1 309 -3 2136 88 15 0 chr10 613809 614176 -139702589 - AluSx SINE Alu 0 375 5 262 241 37 0 chr10 614332 614386 -139702379 + MER5A DNA MER1_type 109 164 -25 230 257 40 0 chr10 616091 616165 -139700600 + LTR16C LTR ERVL 408 484 -7 729 224 52 5 chr10 619024 619216 -139697549 + L1MB3 LINE L1 5470 5670 -501 1618 184 14 20 chr10 619216 619367 -139697398 - AluJo SINE Alu -16 296 146 2733 95 16 0 chr10 619367 619736 -139697029 + THE1C LTR MaLR 1 375 0 1618 184 14 20 chr10 619736 619877 -139696888 - AluJo SINE Alu -166 146 6 1715 211 136 0 chr10 619877 620332 -139696433 + L1MB3 LINE L1 5657 6173 -10 884 181 6 6 chr10 623947 624107 -139692658 - AluJb SINE Alu -22 290 131 326 300 154 11 chr10 624692 624952 -139691813 + MLT1A2 LTR MaLR 26 322 -52 2424 75 0 3 chr10 625211 625518 -139691247 - AluSx SINE Alu -4 308 3 1231 144 229 0 chr10 628171 628407 -139688358 + AluJo SINE Alu 1 290 -22 322 317 0 0 chr10 629246 629639 -139687126 + (TG)n Simple_repeat Simple_repeat 1 393 0 1113 166 0 10 chr10 630183 630376 -139686389 + AluJb SINE Alu 116 306 -6 307 222 218 56 chr10 631052 631286 -139685479 + L1M4 LINE L1 4297 4568 -1578 463 264 88 0 chr10 631925 632073 -139684692 + L1M4 LINE L1 4552 4712 -1434 6084 138 36 12 chr10 632074 632761 -139684004 + L1P4 LINE L1 1190 1916 -4933 2121 181 89 26 chr10 632761 633220 -139683545 + LTR2B LTR ERV1 3 490 0 6084 138 36 12 chr10 633220 633659 -139683106 + L1P4 LINE L1 1916 2343 -4506 2574 116 6 3 chr10 633660 634023 -139682742 + THE1B LTR MaLR 1 364 0 4692 106 83 60 chr10 634023 634938 -139681827 + THE1B-int LTR MaLR 1 936 -644 3902 122 47 56 chr10 634907 635614 -139681151 - THE1B-int LTR MaLR -833 747 46 * 2061 120 3 20 chr10 635614 635915 -139680850 - AluSq SINE Alu -17 296 1 3902 122 47 56 chr10 635915 635960 -139680805 - THE1B-int LTR MaLR -1534 46 2 2516 107 19 25 chr10 635961 636326 -139680439 - THE1B LTR MaLR 0 364 2 4836 241 106 8 chr10 636334 636391 -139680374 + L1P4 LINE L1 2348 2398 -4451 405 0 0 0 chr10 636391 636436 -139680329 + (CA)n Simple_repeat Simple_repeat 2 46 0 4836 241 106 8 chr10 636436 638217 -139678548 + L1P4 LINE L1 2398 4371 -2478 3716 160 28 58 chr10 638216 638430 -139678335 + L1P4 LINE L1 5036 5255 -1614 * 2273 82 0 16 chr10 638430 638735 -139678030 - AluY SINE Alu -10 301 2 3716 160 28 58 chr10 638735 639698 -139677067 + L1P4 LINE L1 5255 6163 -706 1779 175 0 7 chr10 639698 639990 -139676775 - AluJo SINE Alu -22 290 1 3716 160 28 58 chr10 639990 640079 -139676686 + L1P4 LINE L1 6163 6253 -616 235 227 82 27 chr10 640446 640556 -139676209 + Charlie5 DNA MER1_type 2402 2517 -95 237 263 53 0 chr10 641702 641778 -139674987 + MER116 DNA Mariner 1 80 0 184 227 23 0 chr10 642394 642438 -139674327 + L2 LINE L2 1877 1921 -1393 228 252 151 58 chr10 643877 644016 -139672749 + MLT1L LTR MaLR 41 192 -423 421 314 76 22 chr10 644546 644833 -139671932 + L1MEc LINE L1 2219 2525 -3690 335 321 28 0 chr10 645926 646032 -139670733 - L2 LINE L2 -10 3262 3154 347 380 20 64 chr10 646102 646352 -139670413 + L1M4 LINE L1 4777 5015 -1131 474 189 0 0 chr10 646677 646788 -139669977 + GA-rich Low_complexity Low_complexity 3 113 0 312 277 127 11 chr10 647591 647858 -139668907 + L1M4 LINE L1 5062 5359 -787 21 0 0 0 chr10 648308 648329 -139668436 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 650589 650629 -139666136 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr10 651789 651812 -139664953 + GC_rich Low_complexity Low_complexity 1 23 0 2104 114 0 7 chr10 652599 652898 -139663867 - AluSc SINE Alu -12 297 1 191 59 0 29 chr10 652902 652936 -139663829 + (TTA)n Simple_repeat Simple_repeat 1 33 0 311 286 36 19 chr10 654334 654484 -139662281 - MIR SINE MIR -36 172 17 2140 119 0 0 chr10 654744 655037 -139661728 + AluSx SINE Alu 1 293 -19 195 374 24 0 chr10 656417 656500 -139660265 + MIR SINE MIR 178 262 0 24 0 0 0 chr10 657258 657282 -139659483 + AT_rich Low_complexity Low_complexity 1 24 0 493 293 55 6 chr10 660533 660697 -139656068 + ERVL LTR ERVL 3223 3394 -2370 291 288 159 6 chr10 662244 662414 -139654351 + LTR50 LTR ERVL 14 209 -586 1757 183 0 0 chr10 663007 663322 -139653443 + AluJo SINE Alu 1 315 0 26 0 0 0 chr10 663798 663824 -139652941 + AT_rich Low_complexity Low_complexity 1 26 0 2355 71 0 7 chr10 665789 666086 -139650679 + AluY SINE Alu 1 295 -16 189 0 0 0 chr10 670073 670094 -139646671 + (T)n Simple_repeat Simple_repeat 1 21 0 348 247 113 20 chr10 670124 670274 -139646491 + L1ME1 LINE L1 36 199 -6197 1624 208 124 47 chr10 670346 670828 -139645937 + L1ME1 LINE L1 469 1007 -5389 2623 58 0 0 chr10 670828 671139 -139645626 - AluY SINE Alu 0 311 1 1624 208 124 47 chr10 671139 671253 -139645512 + L1ME1 LINE L1 1007 1111 -5285 1292 242 138 23 chr10 671335 671848 -139644917 + L1ME1 LINE L1 1408 1979 -4417 1386 104 0 45 chr10 671942 672164 -139644601 + MER30 DNA MER1_type 2 213 -17 1260 198 87 43 chr10 672174 672406 -139644359 + L1ME1 LINE L1 2057 2277 -4119 2295 105 3 0 chr10 672406 672710 -139644055 + AluSc SINE Alu 1 305 -4 1260 198 87 43 chr10 672710 672916 -139643849 + L1ME1 LINE L1 2277 2514 -3882 386 22 0 0 chr10 673665 673711 -139643054 + AluSg SINE Alu 1 46 -256 1132 79 0 0 chr10 673711 673851 -139642914 + AluSg/x SINE Alu 158 297 -15 1895 108 0 0 chr10 674495 674745 -139642020 + AluSg SINE Alu 47 296 -14 28 61 0 0 chr10 674915 674964 -139641801 + AT_rich Low_complexity Low_complexity 1 49 0 415 292 60 0 chr10 675848 676016 -139640749 + L1ME1 LINE L1 3337 3514 -2701 947 292 73 10 chr10 676055 676463 -139640302 + L1ME1 LINE L1 4492 4925 -1290 704 258 55 19 chr10 676509 676780 -139639985 + L1ME1 LINE L1 5026 5306 -909 6119 181 34 6 chr10 676831 678232 -139638533 + L1MC1 LINE L1 4885 6328 -5 2217 233 110 31 chr10 678243 679053 -139637712 + L1ME1 LINE L1 5355 6228 -7 24 32 0 0 chr10 679260 679291 -139637474 + AT_rich Low_complexity Low_complexity 1 31 0 1939 152 3 7 chr10 679665 679961 -139636804 + AluSx SINE Alu 1 295 -17 2087 132 3 3 chr10 680995 681291 -139635474 - AluSc SINE Alu -13 296 1 2360 103 0 0 chr10 682212 682514 -139634251 + AluSq SINE Alu 1 302 -11 331 303 114 56 chr10 684975 685388 -139631377 - L2 LINE L2 -9 3263 2827 290 319 184 23 chr10 685598 685902 -139630863 - L2 LINE L2 -1155 2159 1807 604 308 81 39 chr10 686166 686313 -139630452 + L1MC1 LINE L1 40 179 -6217 2317 80 0 39 chr10 686313 686624 -139630141 - AluSg SINE Alu -11 299 1 604 308 81 39 chr10 686624 686995 -139629770 + L1MC1 LINE L1 179 580 -5816 1634 255 103 7 chr10 686997 687581 -139629184 + L1MC1 LINE L1 607 1246 -5150 549 332 40 12 chr10 687618 687940 -139628825 + L1MC1 LINE L1 1760 2090 -4306 1456 175 183 99 chr10 688012 688380 -139628385 + L1MD3 LINE L1 6701 7036 -959 255 253 0 13 chr10 688380 688455 -139628310 + MLT1F1 LTR MaLR 52 125 -442 1456 175 183 99 chr10 688455 688978 -139627787 + L1MD3 LINE L1 7036 7983 -12 6053 254 108 29 chr10 688982 689976 -139626789 + L1MC1 LINE L1 2179 3094 -3121 2228 114 0 0 chr10 689976 690275 -139626490 - AluSx SINE Alu -9 303 5 6053 254 108 29 chr10 690275 690582 -139626183 + L1MC1 LINE L1 3094 3376 -2839 1752 164 4 4 chr10 690582 690857 -139625908 + AluJb SINE Alu 5 279 -33 6053 254 108 29 chr10 690857 691991 -139624774 + L1MC1 LINE L1 3376 4853 -1362 13341 144 49 15 chr10 691991 692197 -139624568 - Tigger1 DNA MER2_type 0 2418 2220 2016 158 0 0 chr10 692197 692500 -139624265 + AluSx SINE Alu 1 303 -9 13341 144 49 15 chr10 692500 694629 -139622136 - Tigger1 DNA MER2_type -198 2220 4 6053 254 108 29 chr10 694629 694916 -139621849 + L1MC1 LINE L1 4853 5116 -1099 345 239 147 0 chr10 695032 695141 -139621624 + L1MC1 LINE L1 5323 5447 -2407 4869 194 49 12 chr10 695151 696203 -139620562 + L1MCa LINE L1 30 1120 -5306 338 85 0 0 chr10 696221 696268 -139620497 + MER39B LTR ERV1 1 47 -606 1175 133 133 18 chr10 696280 696506 -139620259 + LTR49-int LTR ERV1 375 626 -5705 * 1519 167 141 95 chr10 696504 696988 -139619777 + LTR49-int LTR ERV1 751 1256 -5075 2124 216 62 4 chr10 696990 697665 -139619100 + L1M3 LINE L1 4788 5491 -692 987 118 0 0 chr10 697665 697800 -139618965 + AluSq/x SINE Alu 1 135 -177 2059 118 28 0 chr10 697800 698087 -139618678 + AluSg SINE Alu 1 295 -15 935 141 0 25 chr10 698088 698251 -139618514 + L1M3 LINE L1 5483 5641 -542 4660 152 6 17 chr10 698251 699020 -139617745 + L1MC1 LINE L1 5632 6402 0 1655 234 58 29 chr10 699021 699537 -139617228 + L1ME2 LINE L1 5390 5920 -244 238 200 83 0 chr10 699537 699597 -139617168 + FRAM/FAM SINE Alu 15 79 -87 2385 82 0 0 chr10 699670 699964 -139616801 + AluY SINE Alu 1 294 -17 225 0 0 0 chr10 701052 701077 -139615688 + (A)n Simple_repeat Simple_repeat 1 25 0 2032 97 8 0 chr10 701313 701580 -139615185 + AluY SINE Alu 40 308 -3 2463 43 3 23 chr10 702022 702324 -139614441 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 702472 702493 -139614272 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 703213 703234 -139613531 + AT_rich Low_complexity Low_complexity 1 21 0 2235 103 7 0 chr10 703467 703769 -139612996 + AluSx SINE Alu 1 304 -8 264 281 94 41 chr10 704175 704346 -139612419 + L2 LINE L2 2723 2902 -412 21 36 0 0 chr10 705814 705842 -139610923 + AT_rich Low_complexity Low_complexity 1 28 0 309 295 116 0 chr10 706042 706171 -139610594 - MIR SINE MIR -27 235 92 2270 123 0 3 chr10 706374 706682 -139610083 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 707172 707193 -139609572 + AT_rich Low_complexity Low_complexity 1 21 0 1805 116 27 62 chr10 708401 708700 -139608065 + AluSx SINE Alu 1 288 -24 424 0 0 0 chr10 708700 708747 -139608018 + (TAA)n Simple_repeat Simple_repeat 2 180 0 180 339 18 18 chr10 709271 709327 -139607438 + L3 LINE CR1 570 625 -952 258 326 11 0 chr10 712591 712683 -139604082 + L1MC4 LINE L1 7826 7918 -124 2029 98 0 11 chr10 712745 713055 -139603710 + AluSx SINE Alu 1 307 0 281 229 96 108 chr10 713654 713820 -139602945 - MIR SINE MIR 0 262 99 570 262 66 33 chr10 713959 714142 -139602623 + MIR SINE MIR 10 198 -64 182 209 68 122 chr10 714134 714282 -139602483 + L2 LINE L2 2764 2903 -411 * 675 180 34 4 chr10 714332 714481 -139602284 - MSTC LTR MaLR -9 419 271 674 186 6 51 chr10 714488 714644 -139602121 - MSTC LTR MaLR -247 149 1 3744 211 48 60 chr10 714655 714899 -139601866 - MSTC-int LTR MaLR -13 1722 1476 2065 112 10 7 chr10 714899 715204 -139601561 + AluSp SINE Alu 1 306 -7 3744 211 48 60 chr10 715204 715983 -139600782 - MSTC-int LTR MaLR -259 1476 712 989 186 0 0 chr10 716030 716191 -139600574 + FRAM SINE Alu 1 161 -5 807 164 21 21 chr10 716300 716440 -139600325 + MIR SINE MIR 22 161 -101 634 249 202 27 chr10 716565 717150 -139599615 - L2 LINE L2 -15 3298 2601 353 276 19 0 chr10 717344 717449 -139599316 + L1ME3A LINE L1 6048 6154 -16 1515 144 114 4 chr10 718292 718563 -139598202 - AluJo SINE Alu -1 301 1 2414 73 0 0 chr10 718568 718869 -139597896 - AluSq SINE Alu -12 301 1 732 183 0 7 chr10 719576 719713 -139597052 + AluSg/x SINE Alu 177 312 0 282 162 108 77 chr10 720106 720238 -139596527 - MLT1D LTR MaLR 0 505 464 377 262 49 12 chr10 720266 720430 -139596335 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 548 234 36 12 chr10 720436 720603 -139596162 - MLT1D LTR MaLR -263 242 72 406 216 0 34 chr10 723906 723994 -139592771 - Tigger5 DNA MER2_type -3 2320 2236 249 260 41 27 chr10 724052 724125 -139592640 - Tigger5 DNA MER2_type -2249 74 1 390 165 15 8 chr10 724489 724622 -139592143 + (CA)n Simple_repeat Simple_repeat 2 135 0 1664 246 90 11 chr10 725915 726481 -139590284 + L1MA4 LINE L1 5690 6300 0 692 112 9 0 chr10 726535 726642 -139590123 + MSTA LTR MaLR 2 109 -319 370 70 18 0 chr10 726646 726703 -139590062 + MSTA LTR MaLR 52 109 -319 370 70 18 0 chr10 726707 726764 -139590001 + MSTA LTR MaLR 52 109 -319 370 103 20 13 chr10 726755 726832 -139589933 + MSTA LTR MaLR 45 119 -256 302 123 18 0 chr10 726829 726886 -139589879 + MSTA LTR MaLR 52 109 -319 * 325 98 0 0 chr10 726890 726941 -139589824 + MSTA LTR MaLR 52 102 -326 1682 138 163 9 chr10 726943 727268 -139589497 + MSTA LTR MaLR 45 419 -9 1934 105 17 3 chr10 727905 728199 -139588566 + AluSx SINE Alu 1 298 -14 204 135 27 0 chr10 731501 731538 -139585227 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 273 201 19 chr10 733161 733315 -139583450 + MIR SINE MIR 6 187 -75 775 237 103 9 chr10 735118 735342 -139581423 - MLT1D LTR MaLR -5 500 256 645 137 20 26 chr10 738151 738304 -139578461 + GA-rich Low_complexity Low_complexity 1 152 0 1289 277 58 16 chr10 739212 739803 -139576962 + L1ME LINE L1 2112 2762 -3890 690 155 66 94 chr10 739903 740084 -139576681 + MLT2B2 LTR ERVL 340 515 0 1778 165 42 22 chr10 740086 740443 -139576322 + L1MB3 LINE L1 5813 6176 -7 26 0 0 0 chr10 740443 740469 -139576296 + AT_rich Low_complexity Low_complexity 1 26 0 413 301 98 33 chr10 740744 741080 -139575685 + L1ME LINE L1 4448 4805 -1735 * 2187 136 21 38 chr10 741063 741251 -139575514 + L1MA7 LINE L1 5175 5365 -926 2049 129 7 0 chr10 741251 741545 -139575220 + AluSx SINE Alu 1 296 -16 2187 136 21 38 chr10 741545 741833 -139574932 + L1MA7 LINE L1 5365 5648 -643 459 228 0 0 chr10 741880 741959 -139574806 - Tigger5 DNA MER2_type -2244 79 1 3513 167 9 36 chr10 741964 742623 -139574142 + L1MA7 LINE L1 5650 6290 -1 1346 199 21 28 chr10 742636 742923 -139573842 + AluJo SINE Alu 3 287 -25 34 72 0 0 chr10 743141 743210 -139573555 + AT_rich Low_complexity Low_complexity 1 69 0 480 314 54 4 chr10 743351 743612 -139573153 + L1ME LINE L1 4814 5087 -1453 301 196 137 20 chr10 744232 744334 -139572431 + L1ME LINE L1 5142 5255 -1285 2419 74 0 0 chr10 744439 744750 -139572015 + AluY SINE Alu 1 311 0 21 0 0 0 chr10 745583 745604 -139571161 + AT_rich Low_complexity Low_complexity 1 21 0 15534 175 44 18 chr10 745615 750331 -139566434 + L1M1 LINE L1 3 4933 -2072 2142 116 0 0 chr10 750331 750624 -139566141 + AluSx SINE Alu 1 293 -19 15534 175 44 18 chr10 750624 752018 -139564747 + L1M1 LINE L1 4933 6289 -716 2684 137 43 2 chr10 752014 752299 -139564466 + L1MA4A LINE L1 5494 5805 -498 * 285 29 0 0 chr10 752299 752333 -139564432 + (CA)n Simple_repeat Simple_repeat 2 35 0 2684 137 43 2 chr10 752333 752493 -139564272 + L1MA4A LINE L1 5805 5957 -346 737 168 74 62 chr10 752498 752711 -139564054 + L1MA4A LINE L1 6037 6239 -52 354 145 0 0 chr10 753523 753592 -139563173 + L1MA4A LINE L1 6230 6298 -5 293 233 128 8 chr10 753667 753800 -139562965 + L1ME4a LINE L1 5973 6121 0 * 1721 286 113 38 chr10 753794 755152 -139561613 + L1MEc LINE L1 9 1468 -4928 1969 130 31 0 chr10 755152 755444 -139561321 + AluSx SINE Alu 1 301 -11 918 214 104 6 chr10 755476 755836 -139560929 + L1ME LINE L1 5543 5931 -629 2038 118 0 0 chr10 755984 756271 -139560494 + AluSx SINE Alu 1 287 -25 1648 176 91 18 chr10 756290 756620 -139560145 + MLT1A1 LTR MaLR 12 365 0 311 317 154 48 chr10 756651 756859 -139559906 + L1MC4a LINE L1 6542 6771 -1037 251 273 20 10 chr10 757052 757151 -139559614 + L1MC4 LINE L1 6810 6909 -1133 442 271 97 20 chr10 757321 757568 -139559197 + L1MC5 LINE L1 6955 7220 -741 2182 119 9 0 chr10 758229 758557 -139558208 + L1PA10 LINE L1 5827 6157 -11 642 189 104 25 chr10 759255 759456 -139557309 + Charlie5 DNA MER1_type 2380 2596 -16 2173 109 3 0 chr10 759706 760009 -139556756 - AluSp SINE Alu -9 304 1 307 336 134 16 chr10 760467 760788 -139555977 - L1M2 LINE L1 -5717 1132 774 1878 125 10 14 chr10 761378 761674 -139555091 + AluSx SINE Alu 1 295 -17 236 140 88 35 chr10 761747 761804 -139554961 - L1 LINE L1 -3326 2820 2761 563 197 21 14 chr10 763088 763230 -139553535 + L1MB8 LINE L1 6027 6169 -9 1703 94 0 0 chr10 763364 763588 -139553177 - AluY SINE Alu -15 296 73 2101 103 6 6 chr10 764205 764516 -139552249 + AluSp SINE Alu 3 313 0 39 22 0 0 chr10 764535 764581 -139552184 + AT_rich Low_complexity Low_complexity 1 46 0 887 118 0 37 chr10 764625 764761 -139552004 + FLAM_C SINE Alu 1 131 -2 32 43 0 0 chr10 764835 764881 -139551884 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr10 765139 765174 -139551591 + AT_rich Low_complexity Low_complexity 1 35 0 1493 207 119 14 chr10 766051 766481 -139550284 + MER39 LTR ERV1 232 706 -1 22 0 0 0 chr10 766783 766805 -139549960 + AT_rich Low_complexity Low_complexity 1 22 0 4640 167 48 45 chr10 767047 767090 -139549675 + L1MA9 LINE L1 5254 5295 -1017 198 0 0 0 chr10 767090 767112 -139549653 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4640 167 48 45 chr10 767112 767782 -139548983 + L1MA9 LINE L1 5295 5961 -351 1886 122 11 0 chr10 767782 768060 -139548705 + AluSp SINE Alu 2 282 -31 183 42 0 0 chr10 768060 768084 -139548681 + (CA)n Simple_repeat Simple_repeat 1 24 0 4640 167 48 45 chr10 768084 768387 -139548378 + L1MA9 LINE L1 5960 6275 -37 1883 148 6 3 chr10 768401 768712 -139548053 + AluSx SINE Alu 1 312 0 1829 131 7 7 chr10 768715 769006 -139547759 + AluSx SINE Alu 1 291 -21 1961 133 7 7 chr10 769011 769319 -139547446 + AluSx SINE Alu 1 308 -4 3874 146 63 40 chr10 769449 769732 -139547033 - MER6 DNA MER2_type -75 790 515 1724 171 7 0 chr10 769732 770041 -139546724 + AluJb SINE Alu 1 311 -1 3874 146 63 40 chr10 770041 770522 -139546243 - MER6 DNA MER2_type -350 515 9 1627 109 40 8 chr10 770625 770873 -139545892 + AluSx SINE Alu 31 286 -26 183 42 0 0 chr10 771637 771661 -139545104 + (TTA)n Simple_repeat Simple_repeat 1 24 0 554 239 241 52 chr10 772021 772593 -139544172 + L1MC5 LINE L1 7246 7925 -36 2418 55 0 0 chr10 773639 773932 -139542833 - AluY SINE Alu -17 294 2 1859 143 0 19 chr10 773997 774311 -139542454 - AluSx SINE Alu -4 308 1 695 276 43 0 chr10 774572 774782 -139541983 - L1MD3 LINE L1 -170 7825 7607 304 333 87 0 chr10 774969 775095 -139541670 + L1MC5 LINE L1 6973 7109 -852 499 239 81 125 chr10 775322 775988 -139540777 + L1MC5 LINE L1 7273 7909 -52 1874 119 3 7 chr10 775998 776334 -139540431 + AluSx SINE Alu 1 335 0 1312 142 123 26 chr10 776525 776793 -139539972 + AluSx SINE Alu 14 307 -5 349 229 132 62 chr10 776825 776969 -139539796 + L1ME4a LINE L1 5852 6005 -116 21 36 0 0 chr10 777007 777035 -139539730 + AT_rich Low_complexity Low_complexity 1 28 0 601 232 20 33 chr10 777263 777414 -139539351 + Charlie1 DNA MER1_type 2 150 -2611 * 1465 187 68 64 chr10 777398 777885 -139538880 + Charlie1 DNA MER1_type 2272 2760 -1 3708 202 18 63 chr10 777961 778801 -139537964 + L1ME LINE L1 4499 5250 -914 2203 117 0 0 chr10 778801 779110 -139537655 + AluSx SINE Alu 1 309 -3 3708 202 18 63 chr10 779110 779586 -139537179 + L1ME LINE L1 5250 5746 -418 205 321 199 0 chr10 779817 779948 -139536817 - MIR SINE MIR -34 228 72 477 103 15 0 chr10 781160 781228 -139535537 + AluS SINE Alu 2 70 -243 1668 158 34 10 chr10 781430 781722 -139535043 + AluJb SINE Alu 5 303 -9 1776 99 19 83 chr10 782924 783237 -139533528 - AluSx SINE Alu 0 312 20 225 259 71 24 chr10 783354 783439 -139533326 - L2 LINE L2 -3 3310 3222 1910 121 3 16 chr10 783649 783954 -139532811 + AluSq SINE Alu 1 301 -12 1946 237 89 60 chr10 784072 784252 -139532513 + L1MC4 LINE L1 6993 7166 -876 2121 126 0 0 chr10 784252 784554 -139532211 - AluJb SINE Alu -10 302 1 1946 237 89 60 chr10 784554 785073 -139531692 + L1MC4 LINE L1 7166 7668 -374 1989 105 3 7 chr10 785073 785395 -139531370 - AluSx SINE Alu 0 312 3 1946 237 89 60 chr10 785395 785457 -139531308 + L1MC4 LINE L1 7668 7727 -315 2362 65 0 10 chr10 785457 785766 -139530999 - AluY SINE Alu -5 306 1 1946 237 89 60 chr10 785766 785908 -139530857 + L1MC4 LINE L1 7727 7925 -117 241 247 0 14 chr10 786048 786121 -139530644 + L1MC5 LINE L1 7706 7777 -184 2093 106 0 29 chr10 787027 787198 -139529567 - AluSx SINE Alu -10 302 142 2445 63 3 0 chr10 787198 787500 -139529265 - AluSp SINE Alu -8 305 3 2093 106 0 29 chr10 787500 787639 -139529126 - AluSx SINE Alu -170 142 1 371 143 0 0 chr10 787639 787695 -139529070 - AluSg/x SINE Alu -167 133 78 2074 76 7 28 chr10 788493 788806 -139527959 - AluSq SINE Alu 0 307 1 917 145 0 0 chr10 788921 789106 -139527659 - FRAM SINE Alu 0 40 1 335 228 43 54 chr10 789270 789362 -139527403 - L1ME LINE L1 -678 5443 5353 428 214 309 0 chr10 789960 790128 -139526637 + MLT1F1 LTR MaLR 189 408 -159 2174 118 0 0 chr10 790128 790432 -139526333 - AluSx SINE Alu -8 304 1 946 203 0 0 chr10 790604 790786 -139525979 - AluJb SINE Alu -1 311 130 26 50 0 0 chr10 792236 792276 -139524489 + AT_rich Low_complexity Low_complexity 1 40 0 1132 84 0 0 chr10 792287 792429 -139524336 + AluSq/x SINE Alu 1 142 -170 231 61 122 41 chr10 792574 792623 -139524142 - L1MC/D LINE L1 -668 5574 5522 * 258 186 36 0 chr10 792614 792684 -139524081 - L1M3 LINE L1 -587 5593 5522 1210 180 24 87 chr10 792685 792974 -139523791 - L1MC/D LINE L1 -659 5583 5357 1377 161 120 0 chr10 792974 793241 -139523524 - AluJo SINE Alu -13 299 1 1210 180 24 87 chr10 793241 793588 -139523177 - L1MC/D LINE L1 -885 5357 4990 * 1752 245 39 51 chr10 793571 794430 -139522335 - L1M3 LINE L1 -1397 4749 3951 2078 90 14 3 chr10 794432 794721 -139522044 + AluSx SINE Alu 1 292 -20 212 321 25 12 chr10 795035 795116 -139521649 + MIR3 SINE MIR 78 159 -49 1911 145 3 3 chr10 795287 795583 -139521182 - AluSx SINE Alu -16 296 1 2306 78 3 7 chr10 796029 796336 -139520429 - AluSp SINE Alu -7 306 1 2442 229 77 13 chr10 796619 796706 -139520059 - L1MD1 LINE L1 0 6242 6162 1736 106 4 4 chr10 796706 796960 -139519805 - AluSq SINE Alu -59 254 1 2442 229 77 13 chr10 796960 797550 -139519215 - L1MD1 LINE L1 -80 6162 5522 268 179 34 0 chr10 797606 797674 -139519091 - L1M3 LINE L1 -587 5593 5524 268 179 34 0 chr10 797671 797739 -139519026 - L1M3 LINE L1 -587 5593 5524 * 304 142 35 0 chr10 797736 797804 -139518961 - L1M3 LINE L1 -587 5593 5524 * 331 155 34 0 chr10 797801 797870 -139518895 - L1M4 LINE L1 -581 5593 5523 2269 46 23 29 chr10 800658 800964 -139515801 - AluY SINE Alu -7 304 1 2032 132 0 13 chr10 801472 801783 -139514982 - AluSx SINE Alu -5 307 1 22 0 0 0 chr10 801987 802009 -139514756 + AT_rich Low_complexity Low_complexity 1 22 0 1742 164 13 0 chr10 802109 802414 -139514351 - AluJb SINE Alu -3 309 1 432 324 0 22 chr10 803699 803881 -139512884 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 365 343 0 17 chr10 803899 804080 -139512685 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 350 210 28 39 chr10 804074 804255 -139512510 + CT-rich Low_complexity Low_complexity 2 180 0 * 1861 170 6 20 chr10 804354 804707 -139512058 + L1MC1 LINE L1 5798 6145 -188 2205 109 6 10 chr10 804743 805054 -139511711 + AluSx SINE Alu 2 311 -1 546 235 143 21 chr10 805145 805383 -139511382 + L1MCa LINE L1 31 297 -6129 680 85 21 0 chr10 805433 805527 -139511238 + L1MCa LINE L1 1780 1875 -4551 1111 89 19 0 chr10 805550 805707 -139511058 - MSTB1 LTR MaLR 0 432 273 297 127 36 0 chr10 805706 805761 -139511004 - MSTB1 LTR MaLR -103 329 273 * 281 143 36 0 chr10 805759 805815 -139510950 - MSTB1 LTR MaLR -102 330 273 * 316 107 36 0 chr10 805813 805869 -139510896 - MSTB1 LTR MaLR -102 330 273 260 132 38 0 chr10 805869 805922 -139510843 - MSTB1 LTR MaLR -104 328 274 1733 173 35 0 chr10 805922 806240 -139510525 - MSTB1 LTR MaLR -103 329 1 944 182 53 53 chr10 806245 806327 -139510438 - MLT1B LTR MaLR -163 227 146 2185 105 0 13 chr10 806327 806640 -139510125 + AluSp SINE Alu 1 309 -4 944 182 53 53 chr10 806640 806782 -139509983 - MLT1B LTR MaLR -243 147 3 195 288 17 0 chr10 806782 806841 -139509924 - L2 LINE L2 -1041 2273 2214 928 256 154 50 chr10 806855 807375 -139509390 + MLT1E1 LTR MaLR 69 642 -12 1083 201 247 25 chr10 807970 808294 -139508471 - MSTD LTR MaLR 0 396 1 2185 98 0 0 chr10 808391 808688 -139508077 - AluSg SINE Alu -13 297 1 275 85 21 0 chr10 810365 810412 -139506353 + (TG)n Simple_repeat Simple_repeat 1 48 0 1997 161 0 3 chr10 810496 810801 -139505964 + AluJo SINE Alu 1 304 -8 1039 276 87 38 chr10 811237 811824 -139504941 + HAL1 LINE L1 574 1189 -1318 1885 88 0 4 chr10 812087 812325 -139504440 - AluSx SINE Alu -75 237 1 250 337 11 32 chr10 812393 812488 -139504277 + L3 LINE CR1 1482 1574 -3 674 327 77 23 chr10 813164 813513 -139503252 + L3 LINE CR1 900 1267 -310 2018 159 3 16 chr10 813771 814086 -139502679 + AluSx SINE Alu 1 311 -1 445 359 80 11 chr10 814519 814781 -139501984 + L3 LINE CR1 1297 1576 -1 420 313 16 1 chr10 815888 816048 -139500717 + L1ME LINE L1 7 169 -5901 1021 214 102 14 chr10 816174 816351 -139500414 + MSTD LTR MaLR 18 178 -187 2215 117 0 10 chr10 816351 816651 -139500114 - AluSq SINE Alu -16 297 1 1021 214 102 14 chr10 816651 816809 -139499956 + MSTD LTR MaLR 178 356 -9 2446 75 0 0 chr10 817682 817974 -139498791 - AluY SINE Alu -19 292 1 268 346 73 0 chr10 818761 818897 -139497868 + MIR SINE MIR 63 208 -54 185 328 164 8 chr10 819057 819179 -139497586 + MIR SINE MIR 122 262 0 309 241 58 11 chr10 819638 819725 -139497040 + L2 LINE L2 3174 3264 -8 1441 158 39 0 chr10 821455 821722 -139495043 - AluJb SINE Alu 0 321 46 1031 157 0 35 chr10 821725 821897 -139494868 + AluJb SINE Alu 147 312 0 422 136 0 0 chr10 821892 821951 -139494814 - AluJb SINE Alu -247 65 7 * 1379 137 26 0 chr10 821962 822188 -139494577 - MER2 DNA MER2_type -112 233 2 314 191 59 112 chr10 822414 822566 -139494199 - L1MEc LINE L1 -2872 3257 3114 518 283 108 36 chr10 822710 822933 -139493832 - L1MEc LINE L1 -4134 2176 1938 344 308 31 54 chr10 823087 823426 -139493339 - L1MEc LINE L1 -861 1629 1325 364 254 65 43 chr10 823447 823585 -139493180 - L1MEc LINE L1 -4909 1210 1070 925 284 104 7 chr10 823600 824012 -139492753 + LTR33 LTR ERVL 2 453 -68 2296 89 0 0 chr10 824012 824292 -139492473 + AluY SINE Alu 1 280 -31 8434 156 22 4 chr10 824292 825731 -139491034 - MLT1A2-int LTR MaLR -186 1465 1 608 129 0 0 chr10 825733 825826 -139490939 - MSTB LTR MaLR -333 93 1 2179 119 10 0 chr10 825885 826188 -139490577 - AluSg SINE Alu -4 306 1 1841 133 91 3 chr10 826427 826713 -139490052 - AluSx SINE Alu -1 311 1 24 0 0 0 chr10 826725 826749 -139490016 + AT_rich Low_complexity Low_complexity 1 24 0 303 228 114 57 chr10 827676 827706 -139489059 + MLT1I LTR MaLR 280 307 -102 1428 201 28 76 chr10 827706 828099 -139488666 - MLT1A2 LTR MaLR 0 374 1 303 228 114 57 chr10 828099 828191 -139488574 + MLT1I LTR MaLR 307 409 0 22 35 0 0 chr10 828239 828268 -139488497 + AT_rich Low_complexity Low_complexity 1 29 0 1385 139 0 42 chr10 829038 829281 -139487484 + AluSg/x SINE Alu 74 307 0 245 340 65 22 chr10 829331 829508 -139487257 + MIR SINE MIR 10 193 -67 189 326 63 0 chr10 829672 829767 -139486998 + MIR SINE MIR 150 250 -12 196 295 67 19 chr10 830125 830230 -139486535 - L2 LINE L2 -3 3269 3160 2271 95 3 3 chr10 830990 831286 -139485479 + AluSx SINE Alu 11 306 -6 353 266 101 0 chr10 831544 831653 -139485112 + L3 LINE CR1 664 783 -794 556 228 151 53 chr10 831739 831945 -139484820 + MIR SINE MIR 2 227 -35 2239 87 27 7 chr10 833436 833734 -139483031 - AluSq SINE Alu -9 304 1 2098 145 14 0 chr10 834060 834356 -139482409 - AluSx SINE Alu -12 300 1 212 296 157 35 chr10 834637 834752 -139482013 - L2 LINE L2 0 3313 3185 2551 49 0 19 chr10 834760 835067 -139481698 + AluY SINE Alu 1 301 -10 287 274 123 0 chr10 835508 835581 -139481184 + L2 LINE L2 3136 3217 -55 2861 22 0 0 chr10 836003 836314 -139480451 - AluY SINE Alu 0 311 1 2549 67 0 0 chr10 836438 836736 -139480029 + AluY SINE Alu 1 298 -13 198 191 270 0 chr10 837055 837118 -139479647 - MIR SINE MIR -63 145 66 2113 123 20 7 chr10 837567 837868 -139478897 - AluSx SINE Alu -7 305 1 1973 82 4 0 chr10 838136 838380 -139478385 - AluSq SINE Alu -68 245 1 240 214 107 0 chr10 838454 838510 -139478255 + L2 LINE L2 3211 3272 0 2128 109 7 7 chr10 838578 838888 -139477877 - AluSx SINE Alu 0 310 1 299 265 312 12 chr10 839135 839305 -139477460 - L2 LINE L2 -19 3294 3074 639 279 293 12 chr10 839437 840199 -139476566 - L2 LINE L2 -1050 2264 1289 21 36 0 0 chr10 840394 840422 -139476343 + AT_rich Low_complexity Low_complexity 1 28 0 200 246 56 84 chr10 841186 841328 -139475437 + MER5A DNA MER1_type 10 147 -42 21 0 0 0 chr10 842381 842402 -139474363 + AT_rich Low_complexity Low_complexity 1 21 0 1940 169 0 16 chr10 842402 842715 -139474050 - AluJb SINE Alu 0 312 5 482 290 54 11 chr10 842866 843052 -139473713 - MER3 DNA MER1_type -1 208 15 2203 122 0 13 chr10 843429 843741 -139473024 - AluSq SINE Alu -4 309 2 2277 135 0 0 chr10 843997 844309 -139472456 + AluSq SINE Alu 1 312 -1 2491 63 13 0 chr10 844556 844856 -139471909 - AluY SINE Alu -7 304 1 267 174 22 0 chr10 845882 845928 -139470837 + MER5A DNA MER1_type 2 48 -141 1115 204 28 45 chr10 845928 846231 -139470534 - L1 LINE L1 -3222 3945 3638 2249 119 6 3 chr10 846231 846542 -139470223 - AluSx SINE Alu 0 312 1 1115 204 28 45 chr10 846542 846831 -139469934 - L1 LINE L1 -3529 3638 3252 * 8508 194 80 24 chr10 846816 849449 -139467316 - L1 LINE L1 -4178 2990 181 2302 76 3 10 chr10 849449 849763 -139467002 - AluY SINE Alu 0 311 1 8508 194 80 24 chr10 849763 849952 -139466813 - L1 LINE L1 -6987 181 4 2285 96 3 0 chr10 850676 850967 -139465798 + AluSq SINE Alu 1 292 -21 956 138 0 0 chr10 851772 851910 -139464855 + FLAM_C SINE Alu 1 138 -5 380 305 177 55 chr10 852184 852451 -139464314 - L1M4 LINE L1 -801 5345 5112 2041 116 35 3 chr10 852451 852735 -139464030 + AluSx SINE Alu 2 294 -18 380 305 177 55 chr10 852735 853054 -139463711 - L1M4 LINE L1 -1034 5112 4687 1738 154 62 0 chr10 854049 854321 -139462444 + AluJb SINE Alu 1 289 -23 1908 114 0 22 chr10 857289 857562 -139459203 - AluSx SINE Alu -4 308 42 198 191 270 0 chr10 858078 858141 -139458624 - MIR SINE MIR -63 145 66 2263 104 3 3 chr10 858592 858890 -139457875 - AluSg SINE Alu -12 298 1 2325 75 20 3 chr10 858892 859186 -139457579 - AluSq SINE Alu -13 300 2 2125 122 10 10 chr10 860611 860914 -139455851 - AluSx SINE Alu -8 304 2 620 156 0 0 chr10 861979 862075 -139454690 + Tigger4(Zombi) DNA MER2_type 1 96 -2635 226 103 0 26 chr10 862072 862111 -139454654 + Tigger4(Zombi) DNA MER2_type 2136 2173 -558 * 622 259 0 8 chr10 862111 862242 -139454523 + FLAM_A SINE Alu 2 131 -2 1880 159 6 22 chr10 862244 862558 -139454207 + AluJb SINE Alu 1 309 -3 22 35 0 0 chr10 862558 862587 -139454178 + AT_rich Low_complexity Low_complexity 1 29 0 3281 160 40 5 chr10 862587 863143 -139453622 + Tigger4(Zombi) DNA MER2_type 2156 2730 -1 238 263 132 0 chr10 865135 865211 -139451554 + L2 LINE L2 3168 3253 -19 3644 201 84 22 chr10 865592 865896 -139450869 + MER21B LTR ERV1 1 285 -578 2226 95 0 23 chr10 865896 866201 -139450564 + AluSx SINE Alu 1 298 -14 3644 201 84 22 chr10 866201 866695 -139450070 + MER21B LTR ERV1 285 848 -15 187 167 0 0 chr10 866905 866935 -139449830 + L2 LINE L2 3216 3245 -27 2593 62 0 0 chr10 866985 867290 -139449475 + AluY SINE Alu 1 305 -6 2216 117 0 0 chr10 867476 867774 -139448991 + AluSq SINE Alu 1 298 -15 2310 121 70 17 chr10 867931 868346 -139448419 + LTR23 LTR ERV1 1 437 0 3542 208 54 60 chr10 869224 870166 -139446599 + LTR23-int LTR ERV1 1558 2493 -3838 1071 62 72 135 chr10 870166 870374 -139446391 + MER30 DNA MER1_type 1 195 -35 711 203 172 55 chr10 870390 870564 -139446201 + LTR23-int LTR ERV1 769 984 -4139 1383 141 97 62 chr10 870564 870854 -139445911 + AluJb SINE Alu 1 300 -12 711 203 172 55 chr10 870854 870935 -139445830 + LTR23-int LTR ERV1 984 1054 -4069 323 247 45 11 chr10 870936 871025 -139445740 + MER34C LTR ERV1 241 332 -253 1901 196 126 105 chr10 871035 871613 -139445152 + LTR23-int LTR ERV1 1160 1724 -3399 266 200 0 36 chr10 871613 871635 -139445130 + AluSg/x SINE Alu 116 135 -167 289 79 0 0 chr10 871635 871673 -139445092 + Alu SINE Alu 1 38 -262 * 1461 156 0 0 chr10 871673 871898 -139444867 + AluSg/x SINE Alu 73 297 -15 1901 196 126 105 chr10 871898 872401 -139444364 + LTR23-int LTR ERV1 1727 2325 -2798 531 77 26 0 chr10 872407 872485 -139444280 + AluSg/x SINE Alu 217 296 -16 2042 102 0 22 chr10 872494 872769 -139443996 + AluSg SINE Alu 6 274 -36 1369 210 61 6 chr10 872819 873147 -139443618 + LTR23-int LTR ERV1 2319 2664 -2459 841 153 8 0 chr10 873147 873278 -139443487 + FRAM SINE Alu 35 166 -10 3636 128 92 48 chr10 873279 873497 -139443268 + LTR23-int LTR ERV1 3810 4017 -2314 2219 67 3 89 chr10 873497 873824 -139442941 + AluY SINE Alu 1 299 -12 3636 128 92 48 chr10 873824 874358 -139442407 + LTR23-int LTR ERV1 4017 4595 -1736 2290 91 3 0 chr10 874387 874673 -139442092 + AluSp SINE Alu 1 287 -26 206 313 50 0 chr10 874941 875021 -139441744 + MIR SINE MIR 97 180 -82 2068 119 0 11 chr10 875087 875372 -139441393 - AluSx SINE Alu -30 282 1 210 42 62 42 chr10 875424 875472 -139441293 + T-rich Low_complexity Low_complexity 3 51 0 1603 151 48 11 chr10 875811 876083 -139440682 + AluJb SINE Alu 1 282 -30 2211 92 0 35 chr10 876440 876756 -139440009 - AluSq SINE Alu -8 305 1 2179 106 3 13 chr10 877627 877929 -139438836 - AluSx SINE Alu -13 299 1 25 0 0 0 chr10 878316 878341 -139438424 + AT_rich Low_complexity Low_complexity 1 25 0 2214 103 0 0 chr10 878850 879159 -139437606 + AluSx SINE Alu 1 309 0 442 300 55 38 chr10 879575 879812 -139436953 + L2 LINE L2 3069 3309 -4 1366 147 100 47 chr10 880437 880716 -139436049 - AluJo SINE Alu -18 294 1 479 203 0 0 chr10 881311 881390 -139435375 - tRNA-Ser-TCA tRNA tRNA -4 81 3 2130 111 3 10 chr10 881595 881893 -139434872 - AluY SINE Alu -15 296 1 387 0 0 0 chr10 881965 882008 -139434757 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 502 162 0 76 chr10 882010 882115 -139434650 - AluJo SINE Alu -31 281 185 592 224 8 0 chr10 882127 882252 -139434513 - AluJo SINE Alu -186 126 1 1905 130 3 89 chr10 882316 882685 -139434080 + MER1B DNA MER1_type 1 337 0 2491 87 3 0 chr10 883380 883692 -139433073 - AluSp SINE Alu 0 313 1 1898 156 7 7 chr10 883890 884192 -139432573 - AluSx SINE Alu -10 302 1 186 245 82 0 chr10 884426 884475 -139432290 - MIR SINE MIR -126 82 30 316 130 0 0 chr10 885300 885346 -139431419 - tRNA-Gly-GGC tRNA tRNA -28 46 1 24 32 0 0 chr10 885500 885531 -139431234 + AT_rich Low_complexity Low_complexity 1 31 0 2358 61 0 17 chr10 885585 885879 -139430886 - AluY SINE Alu -22 289 1 2085 134 3 3 chr10 886017 886323 -139430442 - AluJb SINE Alu -6 306 1 507 125 313 9 chr10 886350 886462 -139430303 - LTR23 LTR ERV1 0 437 292 515 189 54 0 chr10 886509 886620 -139430145 - LTR23-int LTR ERV1 -223 4900 4784 6076 140 36 12 chr10 886636 887678 -139429087 - LTR23-int LTR ERV1 -663 5668 4602 1617 188 4 4 chr10 887678 887950 -139428815 + AluJo SINE Alu 3 274 -38 25 0 0 0 chr10 888345 888370 -139428395 + AT_rich Low_complexity Low_complexity 1 25 0 1808 163 42 22 chr10 888370 888727 -139428038 - L1MB3 LINE L1 -7 6176 5813 682 155 66 94 chr10 888729 888910 -139427855 - MLT2B2 LTR ERVL 0 515 340 1259 283 58 16 chr10 889010 889601 -139427164 - L1MDb LINE L1 -3890 2650 2112 4032 190 30 7 chr10 889686 890235 -139426530 + MER44D DNA MER2_type 6 448 -2039 1617 101 8 38 chr10 890235 890473 -139426292 + AluSx SINE Alu 1 231 -81 4032 190 30 7 chr10 890473 890635 -139426130 + MER44D DNA MER2_type 448 605 0 2295 102 3 0 chr10 890664 890967 -139425798 - AluY SINE Alu -7 304 1 1798 212 50 18 chr10 890969 891465 -139425300 - L1MDb LINE L1 -4488 2052 1541 24233 31 2 0 chr10 891480 895124 -139421641 - L1PA3 LINE L1 0 6155 2513 3601 63 9 0 chr10 895128 895588 -139421177 - L1PA3 LINE L1 -5626 520 57 743 233 54 18 chr10 895589 895858 -139420907 - L1MDb LINE L1 -4988 1555 1196 804 80 0 0 chr10 896050 896150 -139420615 - AluSp/q SINE Alu -15 298 199 1449 71 0 0 chr10 896161 896330 -139420435 + AluY SINE Alu 1 169 -142 810 206 17 0 chr10 896438 896613 -139420152 + AluY SINE Alu 111 288 -23 1101 171 0 6 chr10 896639 896820 -139419945 - AluSx SINE Alu -132 180 1 369 258 158 54 chr10 897259 897701 -139419064 + L1M2 LINE L1 756 1243 -5606 225 351 21 64 chr10 897956 898144 -139418621 - L1MDb LINE L1 -6310 230 51 814 324 21 24 chr10 898215 898592 -139418173 - L1MEc LINE L1 -4394 2002 1627 2132 122 0 0 chr10 898658 898945 -139417820 - AluSx SINE Alu -25 287 1 466 299 44 28 chr10 899810 900061 -139416704 + L1MB3 LINE L1 5304 5558 -2250 1060 123 0 7 chr10 900547 900702 -139416063 + FRAM SINE Alu 1 154 -12 1330 191 61 29 chr10 900949 901294 -139415471 + L1MB3 LINE L1 5807 6162 -21 1314 77 0 22 chr10 901295 901460 -139415305 - AluSc SINE Alu -13 296 134 2267 119 7 0 chr10 901460 901763 -139415002 - AluSx SINE Alu -7 305 1 1314 77 0 22 chr10 901763 901778 -139414987 - AluSc SINE Alu -175 134 120 696 188 5 0 chr10 901965 902184 -139414581 + (CA)n Simple_repeat Simple_repeat 1 220 0 516 244 0 0 chr10 902232 902412 -139414353 + (CA)n Simple_repeat Simple_repeat 1 180 0 189 171 0 0 chr10 905360 905395 -139411370 + T-rich Low_complexity Low_complexity 1 35 0 4864 174 16 7 chr10 905403 906380 -139410385 - L1PB4 LINE L1 -3 6153 5171 3262 187 14 6 chr10 906381 907023 -139409742 - L1PB4 LINE L1 -1131 5015 4369 215 244 9 0 chr10 907142 907257 -139409508 + (CA)n Simple_repeat Simple_repeat 1 116 0 318 165 25 41 chr10 907418 907539 -139409226 + GA-rich Low_complexity Low_complexity 2 120 0 1148 184 9 18 chr10 907776 907999 -139408766 - AluSg SINE Alu -52 258 38 2177 118 0 0 chr10 909058 909347 -139407418 + AluSx SINE Alu 11 299 -13 514 285 29 17 chr10 909468 909640 -139407125 + MIR SINE MIR 64 237 -25 518 197 8 47 chr10 909700 909827 -139406938 + MER33 DNA MER1_type 34 155 -169 431 297 27 76 chr10 909837 910100 -139406665 + AluJb SINE Alu 1 250 -52 1908 163 0 0 chr10 910310 910593 -139406172 + AluJb SINE Alu 1 283 -29 238 228 88 0 chr10 911433 911490 -139405275 - AluJ/FLAM SINE Alu -240 62 1 1733 130 23 47 chr10 911569 911869 -139404896 + AluSx SINE Alu 1 293 -19 262 264 11 11 chr10 911870 911957 -139404808 - L1ME LINE L1 -325 5796 5710 183 222 19 56 chr10 911973 912027 -139404738 + L2 LINE L2 3006 3057 -215 30 0 0 0 chr10 913486 913516 -139403249 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 913801 913821 -139402944 + (A)n Simple_repeat Simple_repeat 1 20 0 1960 79 120 0 chr10 916120 916386 -139400379 - AluSc SINE Alu 0 299 2 251 250 12 0 chr10 916465 916545 -139400220 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 2276 74 0 0 chr10 917876 918173 -139398592 + AluY SINE Alu 1 297 -14 3366 176 18 22 chr10 918853 919092 -139397673 + L1MA4 LINE L1 5590 5828 -472 2295 88 0 3 chr10 919092 919397 -139397368 + AluY SINE Alu 1 304 -7 3366 176 18 22 chr10 919397 919868 -139396897 + L1MA4 LINE L1 5828 6297 -3 21 0 0 0 chr10 919878 919899 -139396866 + AT_rich Low_complexity Low_complexity 1 21 0 1285 201 115 3 chr10 919910 920309 -139396456 - MER31A LTR ERV1 -1 660 11 378 0 0 0 chr10 920909 920951 -139395814 + (CA)n Simple_repeat Simple_repeat 1 42 0 2213 93 0 7 chr10 921156 921458 -139395307 + AluSx SINE Alu 1 300 -12 231 152 0 0 chr10 921857 921903 -139394862 + CT-rich Low_complexity Low_complexity 1 46 0 2195 83 0 7 chr10 921999 922299 -139394466 - AluSx SINE Alu -9 303 6 643 311 27 18 chr10 923043 923262 -139393503 - MIR SINE MIR -4 258 38 231 302 0 0 chr10 923839 923902 -139392863 + HAL1b LINE L1 245 307 -1041 264 269 90 35 chr10 923910 924055 -139392710 + L2 LINE L2 1390 1542 -1772 997 105 0 0 chr10 924062 924195 -139392570 + AluSq/x SINE Alu 1 133 -180 2309 79 0 3 chr10 924197 924502 -139392263 + AluY SINE Alu 1 304 -7 574 264 116 27 chr10 924508 924766 -139391999 + L2 LINE L2 1552 1832 -1482 1904 112 7 17 chr10 925288 925575 -139391190 - AluSx SINE Alu -26 286 3 23 0 0 0 chr10 925660 925683 -139391082 + AT_rich Low_complexity Low_complexity 1 23 0 1473 141 28 8 chr10 925900 926149 -139390616 + AluJb SINE Alu 6 259 -53 1282 195 64 20 chr10 926587 926931 -139389834 - L1M4 LINE L1 -2117 4029 3671 2090 104 3 0 chr10 927048 927337 -139389428 + AluSg SINE Alu 3 292 -18 376 114 46 80 chr10 927457 927632 -139389133 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 24 32 0 0 chr10 927637 927668 -139389097 + AT_rich Low_complexity Low_complexity 1 31 0 596 190 7 49 chr10 927698 927753 -139389012 - L1M4 LINE L1 -2520 3626 3570 2260 92 3 0 chr10 927753 928057 -139388708 - AluSq SINE Alu -8 305 1 596 190 7 49 chr10 928057 928143 -139388622 - L1M4 LINE L1 -2576 3570 3491 1552 107 37 97 chr10 928261 928560 -139388205 - AluSx SINE Alu -7 305 25 2416 47 0 3 chr10 928857 929156 -139387609 - AluY SINE Alu -13 298 1 2177 29 4 7 chr10 930112 930384 -139386381 + AluY SINE Alu 27 297 -14 209 261 0 0 chr10 930975 931021 -139385744 - MIR SINE MIR -5 257 212 2188 90 0 10 chr10 931887 932197 -139384568 - AluSg SINE Alu -3 307 1 269 303 68 15 chr10 932275 932407 -139384358 - L2 LINE L2 -222 3050 2912 554 245 206 12 chr10 932881 933134 -139383631 - L1ME3 LINE L1 -31 6131 5830 231 224 20 0 chr10 933526 933575 -139383190 - L1ME3 LINE L1 -648 5518 5469 276 150 21 16 chr10 933577 933640 -139383125 - L1ME3 LINE L1 -729 5433 5366 2506 167 106 0 chr10 933642 934163 -139382602 - L1MC1 LINE L1 -2 6331 5756 428 221 33 13 chr10 936157 936334 -139380431 + MER20 DNA MER1_type 1 218 -1 2306 81 7 10 chr10 937691 938000 -139378765 - AluSg SINE Alu -2 308 1 538 250 88 7 chr10 940287 940433 -139376332 - MER105 DNA DNA -1 203 46 232 175 0 0 chr10 940433 940473 -139376292 - MER58 DNA MER1_type 0 2420 2381 827 206 122 55 chr10 940475 940713 -139376052 - MER58 DNA MER1_type -2165 255 2 1909 153 0 0 chr10 941047 941335 -139375430 - AluSx SINE Alu -18 294 7 285 75 0 0 chr10 941441 941481 -139375284 + (TG)n Simple_repeat Simple_repeat 2 41 0 636 240 8 0 chr10 941646 941767 -139374998 + MER2 DNA MER2_type 1 122 -223 738 226 7 0 chr10 941779 941916 -139374849 + Tigger3(Golem) DNA MER2_type 5 142 -2887 528 155 68 142 chr10 941914 942062 -139374703 + Tigger3(Golem) DNA MER2_type 2772 2908 -121 * 345 267 155 0 chr10 942559 942675 -139374090 + Tigger3(Golem) DNA MER2_type 2888 3021 -8 778 162 146 22 chr10 942692 942877 -139373888 + MER2 DNA MER2_type 138 345 0 533 137 226 32 chr10 942956 943080 -139373685 - AluSg/x SINE Alu -29 283 136 21 0 0 0 chr10 943867 943888 -139372877 + GC_rich Low_complexity Low_complexity 1 21 0 1834 131 14 0 chr10 944709 945000 -139371765 - AluSp SINE Alu -18 295 1 624 203 199 16 chr10 945114 945365 -139371400 - Charlie1 DNA MER1_type 0 2761 2465 2913 160 71 11 chr10 945400 945938 -139370827 - MER6A DNA MER2_type 0 605 36 3088 178 44 58 chr10 945952 946740 -139370025 - Charlie1 DNA MER1_type -397 2364 1588 * 3923 203 110 92 chr10 946728 946931 -139369834 - Tigger1 DNA MER2_type -210 2208 2010 2065 118 0 0 chr10 946931 947219 -139369546 - AluSg SINE Alu -22 288 1 3923 203 110 92 chr10 947219 948061 -139368704 - Tigger1 DNA MER2_type -408 2010 1185 1549 134 17 0 chr10 948061 948293 -139368472 - AluSx SINE Alu -19 293 58 3923 203 110 92 chr10 948293 948835 -139367930 - Tigger1 DNA MER2_type -1233 1185 654 1150 111 0 33 chr10 948835 949015 -139367750 - AluJo SINE Alu -15 297 124 3923 203 110 92 chr10 949015 949393 -139367372 - Tigger1 DNA MER2_type -1764 654 1 1885 190 114 12 chr10 949808 950230 -139366535 + MLT1C LTR MaLR 1 465 -2 2224 62 7 0 chr10 951246 951534 -139365231 - AluSg SINE Alu -20 290 1 327 337 54 30 chr10 953429 953595 -139363170 - L3 LINE CR1 -423 1154 985 214 342 111 0 chr10 953633 953750 -139363015 + MIR SINE MIR 73 202 -60 626 328 111 32 chr10 953812 954245 -139362520 - L3 LINE CR1 -605 972 506 2013 122 0 3 chr10 954524 954820 -139361945 + AluSx SINE Alu 1 295 -17 194 309 0 0 chr10 955036 955091 -139361674 - L2 LINE L2 -1 3271 3217 2157 154 3 11 chr10 955548 955899 -139360866 + MER7A DNA MER2_type 1 346 0 262 305 86 51 chr10 956015 956212 -139360553 + L2 LINE L2 926 1129 -2185 251 133 22 22 chr10 956226 956238 -139360527 - MER46A DNA MER2_type -83 153 142 1149 176 134 58 chr10 956238 956394 -139360371 + MER46B DNA MER2_type 3 71 -2660 1867 135 7 3 chr10 956394 956690 -139360075 + AluSx SINE Alu 1 297 -15 1149 176 134 58 chr10 956690 956846 -139359919 + MER46B DNA MER2_type 71 214 -22 1932 293 67 30 chr10 957547 957642 -139359123 + L1MDa LINE L1 21 111 -6429 1920 140 7 0 chr10 957642 957935 -139358830 + AluSg SINE Alu 1 295 -15 1932 293 67 30 chr10 957935 958584 -139358181 + L1MDa LINE L1 111 793 -5747 4344 202 175 20 chr10 958629 959420 -139357345 + L1MDa LINE L1 874 1541 -4999 2096 106 13 10 chr10 959420 959731 -139357034 - AluSx SINE Alu 0 312 1 4344 202 175 20 chr10 959731 960318 -139356447 + L1MDa LINE L1 1541 2466 -4074 1891 248 92 26 chr10 960326 960958 -139355807 + L1MB8 LINE L1 3776 4365 -1877 2187 85 0 3 chr10 960958 961252 -139355513 - AluY SINE Alu -18 293 1 1891 248 92 26 chr10 961252 961553 -139355212 + L1MB8 LINE L1 4365 4645 -1597 2335 96 59 31 chr10 961553 961907 -139354858 - THE1B LTR MaLR 0 364 1 1891 248 92 26 chr10 961907 962586 -139354179 + L1MB8 LINE L1 4645 5489 -753 * 2150 154 27 36 chr10 962583 963024 -139353741 + L1MA4A LINE L1 5674 6110 -193 2039 47 95 0 chr10 963036 963310 -139353455 + AluY SINE Alu 1 300 -11 280 227 40 0 chr10 963318 963393 -139353372 + L1MA4A LINE L1 6182 6259 -44 2160 201 121 53 chr10 963405 964051 -139352714 + L1MB8 LINE L1 5473 6162 -16 1698 248 127 19 chr10 964053 964207 -139352558 + L1MD2 LINE L1 5587 5723 -636 180 0 0 0 chr10 964207 964227 -139352538 + (TA)n Simple_repeat Simple_repeat 2 21 0 1698 248 127 19 chr10 964227 964758 -139352007 + L1MD2 LINE L1 5723 6346 -13 2041 132 0 7 chr10 964760 965063 -139351702 + AluSx SINE Alu 1 301 -11 713 192 215 0 chr10 966494 966713 -139350052 + MER33 DNA MER1_type 55 320 -4 22 0 0 0 chr10 966810 966832 -139349933 + AT_rich Low_complexity Low_complexity 1 22 0 1816 118 21 0 chr10 967287 967567 -139349198 - AluSp SINE Alu -25 288 3 1595 177 21 67 chr10 968530 968903 -139347862 - MLT1B LTR MaLR 0 390 35 702 215 44 39 chr10 968918 969123 -139347642 + MER3 DNA MER1_type 1 206 -3 200 232 54 18 chr10 970138 970194 -139346571 + MIR SINE MIR 93 150 -112 1553 70 0 19 chr10 970234 970447 -139346318 - L1PA7 LINE L1 0 6154 5946 2112 111 7 0 chr10 970737 971035 -139345730 - AluSx SINE Alu -12 300 1 2212 101 0 0 chr10 971490 971787 -139344978 + AluY SINE Alu 1 297 -14 1676 98 161 4 chr10 971854 972109 -139344656 + AluSc SINE Alu 2 296 -3 22 56 0 0 chr10 972866 972902 -139343863 + AT_rich Low_complexity Low_complexity 1 36 0 426 154 56 58 chr10 973172 973274 -139343491 - MLT1E2 LTR MaLR 0 626 468 30 0 0 0 chr10 973297 973327 -139343438 + AT_rich Low_complexity Low_complexity 1 30 0 803 147 0 0 chr10 973787 973903 -139342862 - FLAM_C SINE Alu -23 120 5 2112 123 0 0 chr10 974177 974477 -139342288 - AluSx SINE Alu -12 300 1 2117 98 27 0 chr10 974622 974917 -139341848 - AluSg SINE Alu -7 303 1 2343 68 0 13 chr10 975239 975546 -139341219 + AluY SINE Alu 1 303 -8 2195 92 0 13 chr10 976287 976591 -139340174 + AluSg SINE Alu 1 300 -10 432 167 94 10 chr10 976706 976802 -139339963 + AluJb SINE Alu 191 294 -18 213 204 0 74 chr10 977260 977629 -139339136 + (CTGGGG)n Simple_repeat Simple_repeat 1 341 0 224 318 124 8 chr10 978456 978585 -139338180 + MIR3 SINE MIR 44 187 -21 2159 92 3 0 chr10 980057 980352 -139336413 + AluSg SINE Alu 1 296 -14 1835 94 7 42 chr10 980439 980748 -139336017 + AluY SINE Alu 1 298 -13 935 417 41 17 chr10 984784 985079 -139331686 - AluSx SINE Alu 0 302 1 8107 138 50 38 chr10 987261 988701 -139328064 - Tigger1 DNA MER2_type -960 1458 1 390 265 108 64 chr10 989499 989703 -139327062 - HAL1 LINE L1 -2268 239 27 1176 131 0 0 chr10 989779 989954 -139326811 - AluSg/x SINE Alu -17 295 121 21 0 0 0 chr10 989954 989975 -139326790 + AT_rich Low_complexity Low_complexity 1 21 0 1983 124 3 0 chr10 989975 990266 -139326499 - AluSx SINE Alu -20 292 1 2461 53 3 0 chr10 991706 992010 -139324755 + AluY SINE Alu 1 305 -6 799 95 112 0 chr10 992032 992148 -139324617 + AluSg SINE Alu 2 130 -180 296 54 0 0 chr10 992180 992217 -139324548 - Alu SINE Alu -9 291 255 489 111 0 0 chr10 992339 992411 -139324354 - AluS SINE Alu -236 73 2 1144 163 5 45 chr10 992432 992653 -139324112 + AluJb SINE Alu 99 310 -2 690 280 57 0 chr10 993998 994191 -139322574 - MER58A DNA MER1_type -15 209 6 976 225 86 47 chr10 996177 996537 -139320228 + MLT1A2 LTR MaLR 1 374 0 1814 251 116 21 chr10 996537 997209 -139319556 + MLT1A2-int LTR MaLR 1 736 -635 309 262 36 0 chr10 997329 997413 -139319352 + MLT1A2-int LTR MaLR 686 772 -963 1766 251 21 23 chr10 997472 997947 -139318818 + MLT1A2-int LTR MaLR 1262 1735 0 623 226 11 45 chr10 997955 998132 -139318633 + MLT1A2 LTR MaLR 9 179 -195 2284 74 3 3 chr10 998185 998483 -139318282 - AluSc SINE Alu -11 298 1 414 320 5 2 chr10 998510 998693 -139318072 + MLT1B LTR MaLR 190 374 0 1746 166 47 52 chr10 1001040 1001425 -139315340 - MLT1B LTR MaLR -7 383 1 312 304 97 32 chr10 1001586 1001803 -139314962 + L2 LINE L2 2945 3175 -138 1944 170 77 20 chr10 1002228 1002629 -139314136 - MSTA LTR MaLR 0 428 5 227 321 0 57 chr10 1002641 1002747 -139314018 + L2 LINE L2 3127 3226 -87 1342 230 88 65 chr10 1003936 1004571 -139312194 - MLT1E1 LTR MaLR 0 654 5 245 309 21 69 chr10 1005612 1005653 -139311112 + L2 LINE L2 2305 2346 -968 2405 45 0 0 chr10 1005653 1005944 -139310821 - AluY SINE Alu -20 291 1 245 309 21 69 chr10 1005944 1006090 -139310675 + L2 LINE L2 2346 2483 -831 198 0 0 0 chr10 1006370 1006392 -139310373 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2075 103 0 0 chr10 1006395 1006676 -139310089 - AluSx SINE Alu -31 281 1 239 236 33 26 chr10 1007287 1007381 -139309384 - L1MC5 LINE L1 -10 7916 7679 656 271 73 50 chr10 1007930 1008270 -139308495 - L1MC4 LINE L1 -197 7845 7498 2034 67 63 25 chr10 1009303 1009588 -139307177 + AluSp SINE Alu 1 296 -17 1212 111 0 0 chr10 1011750 1011912 -139304853 - AluSg/x SINE Alu -2 310 149 12705 155 48 12 chr10 1011922 1013809 -139302956 + Tigger1 DNA MER2_type 15 2002 -416 2295 124 0 3 chr10 1013809 1014115 -139302650 - AluSx SINE Alu -7 305 1 12705 155 48 12 chr10 1014115 1014548 -139302217 + Tigger1 DNA MER2_type 2002 2418 0 322 359 0 0 chr10 1015871 1016013 -139300752 - L1PB4 LINE L1 -9 6147 6006 610 215 29 53 chr10 1016201 1016410 -139300355 - L1PB4 LINE L1 -135 6021 5818 1905 155 3 10 chr10 1016902 1017212 -139299553 - AluJb SINE Alu -4 308 1 246 224 20 0 chr10 1019624 1019673 -139297092 + L2 LINE L2 3259 3308 -5 1090 214 59 2 chr10 1023113 1023519 -139293246 - L1MB4 LINE L1 -6 6174 5698 1854 153 43 3 chr10 1074095 1074377 -139242388 + AluSx SINE Alu 1 293 -19 208 170 38 0 chr10 1076016 1076069 -139240696 + CT-rich Low_complexity Low_complexity 2 56 0 2148 118 17 0 chr10 1076069 1076358 -139240407 - AluSg SINE Alu -16 294 1 181 238 71 0 chr10 1077601 1077643 -139239122 + L2 LINE L2 92 136 -3178 186 294 96 75 chr10 1079013 1079159 -139237606 + MIR SINE MIR 58 206 -56 1387 159 142 3 chr10 1081771 1082073 -139234692 + L1PA16 LINE L1 5814 6157 -9 2056 104 47 24 chr10 1082098 1082396 -139234369 + AluSx SINE Alu 1 305 -7 264 182 0 18 chr10 1082396 1082442 -139234323 - MER58 DNA MER1_type -168 47 1 1721 88 4 9 chr10 1084282 1084510 -139232255 + AluY SINE Alu 79 305 -6 3083 207 56 41 chr10 1084510 1085470 -139231295 + L1MDa LINE L1 1741 2706 -3834 1050 163 6 0 chr10 1085472 1085668 -139231097 + AluJo SINE Alu 126 322 0 4341 282 64 25 chr10 1085672 1087450 -139229315 + L1MDa LINE L1 2714 4560 -1980 2596 229 74 14 chr10 1087554 1088454 -139228311 - L1MCa LINE L1 -4634 1792 748 276 80 21 0 chr10 1092257 1092321 -139224444 + L1MC1 LINE L1 5232 5296 -850 1047 101 0 0 chr10 1092321 1092460 -139224305 + AluY SINE Alu 167 305 -6 5864 142 13 25 chr10 1092460 1092739 -139224026 + L1MC1 LINE L1 5310 5591 -742 2225 127 42 23 chr10 1092739 1093093 -139223672 - THE1B LTR MaLR -2 362 2 5864 142 13 25 chr10 1093093 1093842 -139222923 + L1MC1 LINE L1 5591 6325 -8 325 228 79 44 chr10 1093886 1094000 -139222765 + L1MC4 LINE L1 7924 8041 -1 492 241 76 19 chr10 1094211 1094369 -139222396 - Charlie8 DNA MER1_type -2179 238 72 245 304 78 9 chr10 1095307 1095422 -139221343 + Charlie7 DNA MER1_type 1754 1876 -736 1092 256 46 3 chr10 1096032 1096399 -139220366 + L1ME1 LINE L1 3045 3427 -2719 650 216 63 11 chr10 1096718 1096908 -139219857 - L1MCa LINE L1 -6211 215 16 * 1343 241 73 27 chr10 1096906 1097434 -139219331 + L1ME1 LINE L1 5550 6122 -44 280 267 30 30 chr10 1097356 1097491 -139219274 + L1MA10 LINE L1 6200 6334 0 * 390 248 8 48 chr10 1097764 1097889 -139218876 + MARNA DNA Mariner 122 241 -345 1796 122 0 4 chr10 1098371 1098626 -139218139 + AluJb SINE Alu 59 312 0 268 245 32 0 chr10 1098745 1098839 -139217926 - L1ME3A LINE L1 -219 5951 5855 385 295 66 24 chr10 1098994 1099160 -139217605 - MER5A DNA MER1_type -1 188 16 294 296 157 26 chr10 1099195 1099618 -139217147 - L1ME3A LINE L1 -542 5628 5138 371 238 6 0 chr10 1100364 1100536 -139216229 + CT-rich Low_complexity Low_complexity 2 174 0 257 122 67 22 chr10 1100552 1100642 -139216123 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 198 204 45 0 chr10 1102593 1102637 -139214128 - MIR3 SINE MIR -52 156 111 665 263 148 31 chr10 1102891 1103343 -139213422 + MLT1D LTR MaLR 1 505 0 2453 84 7 0 chr10 1105573 1105882 -139210883 + AluSx SINE Alu 1 311 -1 236 262 0 0 chr10 1108112 1108173 -139208592 - MLT1J LTR MaLR -3 508 448 259 332 40 60 chr10 1108298 1108497 -139208268 - MLT1J LTR MaLR -60 451 257 406 238 90 0 chr10 1108772 1108894 -139207871 + LTR16C LTR ERVL 359 491 0 2409 65 7 3 chr10 1109398 1109688 -139207077 - AluSc SINE Alu -11 298 8 350 307 84 12 chr10 1111938 1112104 -139204661 + MIR SINE MIR 78 255 -7 453 246 48 0 chr10 1112290 1112416 -139204349 - L1MA6 LINE L1 0 6300 6169 230 156 11 113 chr10 1112422 1112608 -139204157 + (CAT)n Simple_repeat Simple_repeat 2 168 0 2304 189 90 63 chr10 1112973 1113593 -139203172 - L1MA6 LINE L1 -106 6194 5558 341 294 88 19 chr10 1113594 1113754 -139203011 - MIR3 SINE MIR -7 201 31 23822 34 4 1 chr10 1115684 1118719 -139198046 - L1P LINE L1 -1044 5102 2058 225 234 0 0 chr10 1118772 1118836 -139197929 + GA-rich Low_complexity Low_complexity 2 65 0 197 379 0 0 chr10 1122318 1122421 -139194344 - MER5A DNA MER1_type -3 186 84 234 301 18 35 chr10 1124435 1124548 -139192217 + L3b LINE CR1 1326 1436 -147 1370 180 20 108 chr10 1124900 1125300 -139191465 - MLT1A1 LTR MaLR 0 365 1 2820 133 17 2 chr10 1125361 1125829 -139190936 - L1MC1 LINE L1 -179 6154 5680 418 296 33 19 chr10 1125833 1126046 -139190719 - L1 LINE L1 -1127 5019 4804 1599 150 8 0 chr10 1126203 1126469 -139190296 - MSTB2 LTR MaLR 0 457 190 1095 180 57 12 chr10 1126465 1126710 -139190055 - MSTB2 LTR MaLR -201 256 1 * 528 363 39 13 chr10 1126756 1127216 -139189549 - L1 LINE L1 -1525 4621 4150 258 32 0 0 chr10 1127298 1127329 -139189436 + (TG)n Simple_repeat Simple_repeat 1 31 0 1758 171 0 7 chr10 1127495 1127788 -139188977 - AluJo SINE Alu -21 291 1 248 312 56 0 chr10 1128752 1128877 -139187888 + LTR16A1 LTR ERVL 260 391 -66 11465 25 7 2 chr10 1129436 1131606 -139185159 + L1PA4 LINE L1 3973 6146 -9 2132 102 17 7 chr10 1134322 1134615 -139182150 - AluSq SINE Alu -17 296 1 324 230 27 14 chr10 1136914 1137062 -139179703 + (CA)n Simple_repeat Simple_repeat 1 150 0 338 268 27 18 chr10 1137084 1137196 -139179569 + (CA)n Simple_repeat Simple_repeat 1 113 0 312 245 132 19 chr10 1138248 1138354 -139178411 + L2 LINE L2 3180 3297 -16 1625 157 3 101 chr10 1139207 1139545 -139177220 - AluJb SINE Alu -7 305 1 2458 84 3 0 chr10 1140482 1140781 -139175984 + AluY SINE Alu 1 300 -11 2220 95 3 3 chr10 1142588 1142883 -139173882 - AluSc SINE Alu -14 295 1 1112 75 0 0 chr10 1143502 1143635 -139173130 + AluJb SINE Alu 7 139 -173 288 333 56 0 chr10 1150119 1150227 -139166538 + MIR SINE MIR 57 170 -92 198 0 0 0 chr10 1151182 1151204 -139165561 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 607 271 29 6 chr10 1151264 1151434 -139165331 - MER45A DNA AcHobo -4 174 1 226 227 0 0 chr10 1154273 1154317 -139162448 + T-rich Low_complexity Low_complexity 4 47 0 760 234 70 42 chr10 1156156 1156593 -139160172 - MLT1D LTR MaLR 0 467 5 193 300 78 0 chr10 1157523 1157613 -139159152 + MIR SINE MIR 17 113 -149 2093 91 39 11 chr10 1158361 1158647 -139158118 + AluY SINE Alu 1 294 -17 364 307 108 16 chr10 1159312 1159745 -139157020 - L1MCa LINE L1 -4656 1875 1246 1419 249 8 32 chr10 1159788 1160162 -139156603 + MLT2D LTR ERVL 1 365 -49 376 42 56 14 chr10 1160166 1160238 -139156527 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 299 289 76 5 chr10 1160239 1160436 -139156329 - L1MCa LINE L1 -5014 1402 1192 192 40 0 0 chr10 1161081 1161106 -139155659 + (T)n Simple_repeat Simple_repeat 1 25 0 439 289 179 10 chr10 1161771 1162072 -139154693 + L2 LINE L2 2960 3311 -2 28 48 0 0 chr10 1162235 1162277 -139154488 + AT_rich Low_complexity Low_complexity 1 42 0 826 152 0 0 chr10 1162459 1162591 -139154174 - FLAM_C SINE Alu 0 133 2 273 245 0 0 chr10 1165303 1165356 -139151409 + (CGGG)n Simple_repeat Simple_repeat 4 56 0 883 141 0 22 chr10 1167798 1167933 -139148832 - AluJo/FLAM SINE Alu -170 132 1 415 149 0 103 chr10 1167933 1168031 -139148734 - AluJ/FRAM SINE Alu -7 305 217 * 825 158 0 22 chr10 1168029 1168168 -139148597 - AluJo SINE Alu -175 137 2 301 294 100 6 chr10 1169237 1169397 -139147368 - MER5B DNA MER1_type -3 175 1 707 224 38 6 chr10 1169508 1169691 -139147074 + MER5A DNA MER1_type 1 189 0 258 297 15 123 chr10 1169961 1170156 -139146609 + L1MC/D LINE L1 5611 5784 -2024 445 281 26 0 chr10 1171301 1171454 -139145311 + MLT1A1 LTR MaLR 153 309 -56 2098 88 7 3 chr10 1172755 1173038 -139143727 + AluSx SINE Alu 1 284 -28 327 234 105 16 chr10 1173932 1174056 -139142709 - MLT1C LTR MaLR -6 461 327 180 320 172 8 chr10 1174426 1174548 -139142217 - L2 LINE L2 -20 3252 3111 209 264 22 22 chr10 1174938 1175116 -139141649 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 288 260 14 14 chr10 1175240 1175386 -139141379 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 188 33 0 33 chr10 1176766 1176796 -139139969 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 22908 47 10 3 chr10 1176914 1179860 -139136905 - L1P LINE L1 -3180 2966 1 192 77 0 0 chr10 1180235 1180261 -139136504 + (ATG)n Simple_repeat Simple_repeat 1 26 0 370 309 0 4 chr10 1181947 1182187 -139134578 + (TG)n Simple_repeat Simple_repeat 1 238 0 286 90 56 34 chr10 1184431 1184520 -139132245 + (CA)n Simple_repeat Simple_repeat 1 91 0 252 149 75 15 chr10 1184633 1184767 -139131998 + (TG)n Simple_repeat Simple_repeat 1 142 0 321 119 73 26 chr10 1184803 1184954 -139131811 + (TG)n Simple_repeat Simple_repeat 1 158 0 181 159 65 41 chr10 1184929 1185099 -139131666 + (GTGTG)n Simple_repeat Simple_repeat 2 175 0 * 353 132 72 24 chr10 1185084 1185251 -139131514 + (TG)n Simple_repeat Simple_repeat 1 175 0 7660 19 14 0 chr10 1185803 1187323 -139129442 + L1PA2 LINE L1 4659 6174 0 7524 32 7 7 chr10 1187323 1188293 -139128472 + L1PA4 LINE L1 5177 6146 -9 1057 141 0 22 chr10 1189286 1189653 -139127112 + (CACCAT)n Simple_repeat Simple_repeat 1 360 0 279 0 0 0 chr10 1190287 1190318 -139126447 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 74 0 0 chr10 1191852 1191879 -139124886 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 21317 31 6 3 chr10 1192037 1195394 -139121371 + L1PA4 LINE L1 2644 6007 -148 181 116 23 23 chr10 1195577 1195620 -139121145 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 237 349 47 28 chr10 1195621 1195727 -139121038 - L2 LINE L2 -19 3253 3146 1386 219 103 25 chr10 1195816 1196214 -139120551 + MER63B DNA MER1_type 4 432 -4 456 161 0 72 chr10 1197355 1197548 -139119217 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 483 309 69 56 chr10 1201528 1201832 -139114933 - MER58B DNA MER1_type -8 333 26 362 363 32 0 chr10 1201840 1201997 -139114768 + MIR SINE MIR 46 207 -55 2271 103 0 0 chr10 1202255 1202565 -139114200 - AluSx SINE Alu -2 310 1 483 309 69 56 chr10 1204212 1204516 -139112249 - MER58B DNA MER1_type -8 333 26 362 363 32 0 chr10 1204524 1204681 -139112084 + MIR SINE MIR 46 207 -55 800 190 98 0 chr10 1204939 1205102 -139111663 - AluSg/x SINE Alu -2 308 130 2980 201 80 7 chr10 1205102 1205988 -139110777 + L1MB3 LINE L1 5152 6100 -83 1993 125 0 55 chr10 1206485 1206812 -139109953 - AluSx SINE Alu -3 309 1 1596 176 0 14 chr10 1206960 1207255 -139109510 - AluJo SINE Alu -11 301 11 2149 114 13 0 chr10 1207259 1207566 -139109199 - AluSx SINE Alu -1 311 1 231 366 0 38 chr10 1208860 1209043 -139107722 + C-rich Low_complexity Low_complexity 4 179 0 1854 138 43 0 chr10 1209771 1210053 -139106712 + AluSx SINE Alu 1 294 -18 19095 49 2 4 chr10 1214108 1217301 -139099464 - L1PA4 LINE L1 -1 6154 2969 186 294 96 75 chr10 1219338 1219484 -139097281 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1221136 1221360 -139095405 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1221568 1221789 -139094976 + HAL1 LINE L1 1512 1749 -758 268 255 179 33 chr10 1222503 1222715 -139094050 + HAL1 LINE L1 2265 2507 0 213 240 40 0 chr10 1223449 1223499 -139093266 + C-rich Low_complexity Low_complexity 1 52 0 317 295 67 0 chr10 1223675 1223780 -139092985 + L2 LINE L2 3184 3295 -18 667 293 29 3 chr10 1223791 1223995 -139092770 - MIR SINE MIR 0 262 55 285 211 18 26 chr10 1225906 1226020 -139090745 + (CA)n Simple_repeat Simple_repeat 1 113 0 474 296 107 26 chr10 1226204 1226437 -139090328 + MIR SINE MIR 7 258 -4 619 249 107 29 chr10 1227152 1227503 -139089262 - MLT1C LTR MaLR -7 460 89 939 203 0 0 chr10 1227618 1227781 -139088984 - FRAM SINE Alu -3 163 1 228 228 20 119 chr10 1228358 1228459 -139088306 - L2 LINE L2 -188 3084 2994 7616 33 48 3 chr10 1229864 1230927 -139085838 - L1PA4 LINE L1 -1 6154 5077 10604 40 2 0 chr10 1230927 1232285 -139084480 + L1P LINE L1 2453 3813 -2333 189 0 0 0 chr10 1232289 1232310 -139084455 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 2118 124 0 34 chr10 1232314 1232637 -139084128 - AluSx SINE Alu 0 312 1 1575 127 137 13 chr10 1232650 1232964 -139083801 - L1PA16 LINE L1 0 6166 5814 742 238 25 20 chr10 1233423 1233625 -139083140 - MLT1B LTR MaLR 0 390 188 1783 168 7 7 chr10 1233661 1233972 -139082793 - AluJo SINE Alu 0 311 1 232 235 12 49 chr10 1233974 1234055 -139082710 - MLT1B LTR MaLR -207 167 90 1362 242 3 20 chr10 1234059 1234402 -139082363 + MLT1C-int LTR MaLR 1399 1735 0 763 205 6 23 chr10 1234461 1234632 -139082133 - MLT1A2 LTR MaLR -202 172 5 281 324 9 9 chr10 1237651 1237762 -139079003 - MIR SINE MIR -15 247 137 327 283 35 18 chr10 1238445 1238558 -139078207 - L2 LINE L2 0 3313 3199 270 318 83 23 chr10 1238897 1239029 -139077736 - MIR SINE MIR -64 198 59 220 359 58 26 chr10 1240927 1241083 -139075682 + MIR SINE MIR 6 166 -96 1369 224 99 0 chr10 1241618 1241931 -139074834 - L1MA7 LINE L1 0 6291 5948 491 370 34 13 chr10 1242708 1242943 -139073822 - MIR SINE MIR 0 262 23 3995 112 32 2 chr10 1243230 1243821 -139072944 + MER4B LTR ERV1 1 609 -1 242 347 13 73 chr10 1244795 1244945 -139071820 - MIR SINE MIR -115 147 7 721 132 0 16 chr10 1246510 1246631 -139070134 - FLAM_C SINE Alu -24 119 1 597 187 18 26 chr10 1247309 1247535 -139069230 + GA-rich Low_complexity Low_complexity 1 224 0 639 163 22 22 chr10 1247705 1247883 -139068882 + GA-rich Low_complexity Low_complexity 3 180 0 364 298 60 12 chr10 1249330 1249498 -139067267 + MER5B DNA MER1_type 3 178 0 418 228 94 58 chr10 1251561 1251732 -139065033 + MLT1C LTR MaLR 6 182 -285 1259 234 88 38 chr10 1251794 1252269 -139064496 + LTR55 LTR ERV 34 532 -16 461 260 56 5 chr10 1252279 1252523 -139064242 + MLT1C LTR MaLR 192 373 -17 787 270 40 40 chr10 1253233 1253533 -139063232 - AluSq SINE Alu 0 313 14 418 225 69 27 chr10 1254766 1254917 -139061848 - L1P5 LINE L1 -460 5661 5526 1760 165 7 14 chr10 1256309 1256606 -139060159 - AluJo SINE Alu -11 301 7 207 231 0 58 chr10 1256814 1256866 -139059899 + G-rich Low_complexity Low_complexity 1 49 0 3313 251 88 17 chr10 1258209 1259976 -139056789 + L1MD2 LINE L1 4448 6349 -10 181 281 88 0 chr10 1261438 1261495 -139055270 + MIR SINE MIR 62 123 -85 224 237 17 0 chr10 1261525 1261584 -139055181 + GA-rich Low_complexity Low_complexity 1 60 0 1843 173 3 22 chr10 1263636 1263949 -139052816 + AluJb SINE Alu 1 307 -5 228 67 0 0 chr10 1264857 1264887 -139051878 + (T)n Simple_repeat Simple_repeat 1 30 0 594 259 11 52 chr10 1265381 1265555 -139051210 + L1MB7 LINE L1 3969 4135 -2011 3651 185 68 42 chr10 1265566 1266688 -139050077 + L1MB7 LINE L1 5032 6184 0 242 192 247 0 chr10 1266699 1266772 -139049993 - Charlie7 DNA MER1_type -2516 96 6 1576 188 3 41 chr10 1267050 1267370 -139049395 + AluJb SINE Alu 2 309 -3 195 178 111 0 chr10 1267590 1267635 -139049130 + L3 LINE CR1 1525 1574 -3 227 307 207 27 chr10 1268254 1268404 -139048361 - MIR SINE MIR -84 178 2 231 253 25 13 chr10 1270242 1270321 -139046444 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 228 310 129 9 chr10 1270721 1270837 -139045928 - MER5A DNA MER1_type -3 186 57 220 236 127 73 chr10 1270878 1270988 -139045777 + L2 LINE L2 3154 3269 -3 418 225 81 12 chr10 1271288 1271448 -139045317 + MER76 LTR ERV 1 171 -517 200 222 0 0 chr10 1272320 1272356 -139044409 - L2 LINE L2 -1 3271 3236 222 174 0 0 chr10 1273317 1273363 -139043402 + CT-rich Low_complexity Low_complexity 3 48 0 1099 190 113 12 chr10 1273525 1273772 -139042993 - L1MC1 LINE L1 0 6333 6062 43203 34 23 10 chr10 1273775 1279851 -139036914 + L1PA2 LINE L1 3 6154 -1 3304 170 66 2 chr10 1279864 1280482 -139036283 - L1MC1 LINE L1 -261 6072 5415 238 305 12 12 chr10 1281878 1281960 -139034805 - L2 LINE L2 0 3313 3232 224 292 15 0 chr10 1282311 1282376 -139034389 - L2 LINE L2 -4 3309 3244 257 268 12 49 chr10 1282867 1282949 -139033816 + MIR SINE MIR 40 118 -90 297 310 86 0 chr10 1284497 1284649 -139032116 - MIR SINE MIR -68 140 17 240 100 0 0 chr10 1286325 1286365 -139030400 + (TCC)n Simple_repeat Simple_repeat 3 42 0 22 0 0 0 chr10 1289121 1289143 -139027622 + AT_rich Low_complexity Low_complexity 1 22 0 1042 224 103 24 chr10 1340614 1340944 -138975821 + MLT1A2 LTR MaLR 19 374 0 894 144 7 0 chr10 1341206 1341345 -138975420 + L1P LINE L1 4882 5021 -1125 269 270 95 40 chr10 1341974 1342100 -138974665 + MIR SINE MIR 59 191 -71 10548 37 2 0 chr10 1342765 1344046 -138972719 - L1P LINE L1 -2361 3785 2503 194 326 90 35 chr10 1344146 1344246 -138972519 + MIR SINE MIR 107 219 -43 2254 118 0 0 chr10 1344246 1344551 -138972214 + AluSx SINE Alu 1 305 -7 194 326 90 35 chr10 1344551 1344594 -138972171 + MIR SINE MIR 219 258 -4 1062 203 50 5 chr10 1345296 1345518 -138971247 + L1PA15-16 LINE L1 1453 1684 -5165 254 176 132 0 chr10 1345520 1345588 -138971177 + polypurine Low_complexity Low_complexity 3 79 0 4423 134 31 15 chr10 1345588 1346369 -138970396 + L1PA15-16 LINE L1 1617 2409 -4440 2646 221 20 11 chr10 1346469 1347202 -138969563 + L1 LINE L1 3506 4245 -2604 31 0 0 0 chr10 1348914 1348945 -138967820 + AT_rich Low_complexity Low_complexity 1 31 0 205 296 0 0 chr10 1349072 1349116 -138967649 - L2 LINE L2 -8 3305 3262 197 211 96 19 chr10 1349080 1349132 -138967633 - MIR SINE MIR -10 252 197 * 257 189 176 0 chr10 1349303 1349377 -138967388 + MLT1J LTR MaLR 419 505 -6 447 137 0 27 chr10 1349980 1350053 -138966712 - 5S rRNA rRNA -20 101 31 384 265 17 87 chr10 1350560 1350790 -138965975 - L1ME4a LINE L1 -12 6109 5896 987 176 18 0 chr10 1351933 1352098 -138964667 + MER68 LTR ERV1 395 562 0 461 323 5 5 chr10 1352207 1352405 -138964360 + L1M3 LINE L1 2703 2900 -3246 277 167 0 0 chr10 1352408 1352450 -138964315 - Tigger5 DNA MER2_type 0 2323 2282 * 309 237 17 0 chr10 1352448 1352507 -138964258 + Tigger5 DNA MER2_type 2259 2318 -5 265 182 227 30 chr10 1352507 1352573 -138964192 - Tigger5 DNA MER2_type -2243 80 2 344 178 0 0 chr10 1352575 1352648 -138964117 + L1M3 LINE L1 2904 2976 -3170 226 211 0 39 chr10 1352650 1352702 -138964063 + L1M4 LINE L1 435 484 -6091 443 250 91 40 chr10 1352732 1352908 -138963857 + L1M3c LINE L1 64 248 -6294 1333 222 64 12 chr10 1353073 1353411 -138963354 + L1M3 LINE L1 5231 5580 -600 22 0 0 0 chr10 1354943 1354965 -138961800 + AT_rich Low_complexity Low_complexity 1 22 0 480 331 6 0 chr10 1355242 1355420 -138961345 + (CA)n Simple_repeat Simple_repeat 2 180 0 2430 92 0 0 chr10 1356087 1356392 -138960373 - AluSx SINE Alu -7 305 1 3947 144 58 5 chr10 1356645 1357297 -138959468 + L1PA16 LINE L1 5470 6156 -10 534 201 10 10 chr10 1358062 1358357 -138958408 + (TG)n Simple_repeat Simple_repeat 1 295 0 189 147 0 0 chr10 1359503 1359537 -138957228 + (TC)n Simple_repeat Simple_repeat 1 34 0 213 193 18 18 chr10 1360096 1360153 -138956612 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 330 54 15 chr10 1361486 1361689 -138955076 + L1M3c LINE L1 652 862 -5772 358 237 26 105 chr10 1361936 1362088 -138954677 + L1M4 LINE L1 2088 2227 -4598 219 36 0 0 chr10 1362111 1362139 -138954626 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 342 0 0 0 chr10 1362138 1362176 -138954589 + (TA)n Simple_repeat Simple_repeat 1 38 0 337 291 63 63 chr10 1362438 1362644 -138954121 + L1M3c LINE L1 881 1086 -5479 1857 231 160 45 chr10 1362772 1363572 -138953193 + L1M4c LINE L1 542 1794 -4519 3620 244 33 11 chr10 1363672 1364719 -138952046 + L1P LINE L1 2639 3708 -2438 8574 78 13 0 chr10 1364819 1365955 -138950810 - L1P LINE L1 -4660 1486 336 1754 176 65 40 chr10 1366055 1366425 -138950340 + L1MC1 LINE L1 5950 6328 -5 602 152 27 0 chr10 1366430 1366542 -138950223 + L1MB7 LINE L1 6051 6165 -19 2935 150 44 22 chr10 1366562 1366889 -138949876 - L1MD2 LINE L1 -423 5936 5591 1691 160 35 11 chr10 1366889 1367176 -138949589 - AluJo SINE Alu -18 294 1 2935 150 44 22 chr10 1367176 1367396 -138949369 - L1MD2 LINE L1 -768 5591 5377 518 224 33 33 chr10 1367406 1367558 -138949207 + L1MC5 LINE L1 7314 7465 -496 5808 167 40 3 chr10 1367688 1368820 -138947945 - L1PBa LINE L1 -4453 2410 1093 2800 184 71 17 chr10 1368821 1369413 -138947352 - L1PBa LINE L1 -5815 1048 425 21 36 0 0 chr10 1369688 1369716 -138947049 + AT_rich Low_complexity Low_complexity 1 28 0 5839 163 38 10 chr10 1371208 1372434 -138944331 + L1PA12 LINE L1 225 2004 -5577 999 159 12 0 chr10 1372432 1372595 -138944170 + L1PA13 LINE L1 339 503 -6284 * 21 36 0 0 chr10 1372855 1372883 -138943882 + AT_rich Low_complexity Low_complexity 1 28 0 210 315 0 14 chr10 1373156 1373229 -138943536 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 247 191 0 0 chr10 1373678 1373720 -138943045 + MIR SINE MIR 111 152 -56 1290 139 43 9 chr10 1374531 1374761 -138942004 + MLT1B LTR MaLR 151 388 -2 22 56 0 0 chr10 1375004 1375040 -138941725 + AT_rich Low_complexity Low_complexity 1 36 0 2324 88 16 0 chr10 1377556 1377861 -138938904 + AluSg SINE Alu 1 310 0 4395 183 44 35 chr10 1379247 1380291 -138936474 - L1 LINE L1 -1279 5049 3997 1477 234 61 16 chr10 1380397 1380842 -138935923 - L1ME2 LINE L1 -142 6022 5558 2954 137 41 2 chr10 1380844 1381327 -138935438 - L1PA16 LINE L1 -3 6163 5662 2195 124 0 3 chr10 1381346 1381652 -138935113 - AluSx SINE Alu -7 305 1 906 287 123 21 chr10 1381653 1382538 -138934227 - L1ME2 LINE L1 -1890 4256 3261 5318 184 23 32 chr10 1382656 1384174 -138932591 - L1 LINE L1 -4296 2032 3 186 224 0 0 chr10 1384521 1384570 -138932195 + (TG)n Simple_repeat Simple_repeat 2 50 0 356 327 92 0 chr10 1384744 1384897 -138931868 - MIR SINE MIR -66 196 30 258 241 74 37 chr10 1384966 1385074 -138931691 - L1MA10 LINE L1 0 6334 6223 936 187 7 1 chr10 1385123 1385308 -138931457 - L1ME1 LINE L1 -290 5882 5693 4680 164 38 14 chr10 1385309 1386340 -138930425 + L1MB2 LINE L1 5105 6164 -7 247 169 0 123 chr10 1386345 1386410 -138930355 + L1ME3A LINE L1 5962 6018 -152 418 93 0 0 chr10 1386984 1387038 -138929727 - Alu SINE Alu -250 60 7 463 186 44 18 chr10 1387499 1387612 -138929153 + MER4C LTR ERV1 4 119 -346 226 224 0 0 chr10 1387677 1387726 -138929039 + MER4A LTR ERV1 136 184 -480 399 217 59 129 chr10 1387758 1388146 -138928619 + MER4A LTR ERV1 189 656 -43 4763 187 5 32 chr10 1388766 1389960 -138926805 + L1P4 LINE L1 4316 5472 -694 442 319 44 28 chr10 1389955 1390568 -138926197 + L1ME LINE L1 4934 5557 -605 * 268 206 124 84 chr10 1392041 1392183 -138924582 - MLT1L LTR MaLR -304 207 49 1073 229 47 0 chr10 1392183 1392397 -138924368 - MER58A DNA MER1_type 0 224 1 268 206 124 84 chr10 1392397 1392446 -138924319 - MLT1L LTR MaLR -462 49 3 1902 76 4 0 chr10 1396785 1397035 -138919730 - L1PA8 LINE L1 -3 6169 5919 8273 163 11 12 chr10 1397135 1398149 -138918616 - L1P LINE L1 -1953 4193 3179 2352 93 6 6 chr10 1398149 1398460 -138918305 - AluY SINE Alu 0 311 1 8273 163 11 12 chr10 1398460 1398926 -138917839 - L1P LINE L1 -2967 3179 2714 1764 117 0 0 chr10 1398925 1399164 -138917601 + L1P LINE L1 1 239 -5907 * 312 250 77 0 chr10 1399265 1399369 -138917396 - LTR43 LTR ERV1 -479 123 12 475 329 103 16 chr10 1399459 1399906 -138916859 - L1ME1 LINE L1 -4 6162 5677 849 245 24 21 chr10 1400248 1400611 -138916154 - L1ME1 LINE L1 -782 5364 5155 251 106 0 21 chr10 1401010 1401057 -138915708 + Alu SINE Alu 263 308 0 5307 141 12 15 chr10 1401057 1401926 -138914839 + L1PA15 LINE L1 5297 6165 0 905 240 115 13 chr10 1401937 1402249 -138914516 - L1ME1 LINE L1 -3600 2546 2203 3392 240 80 21 chr10 1402360 1403585 -138913180 - L1 LINE L1 -2550 3596 2300 1801 163 38 20 chr10 1403586 1403930 -138912835 + MER65A LTR ERV1 1 350 -95 3249 123 7 2 chr10 1403932 1404395 -138912370 + HSMAR1 DNA Mariner 27 491 -796 265 345 18 9 chr10 1404495 1404608 -138912157 - L2 LINE L2 -20 3293 3180 238 313 56 56 chr10 1405674 1405818 -138910947 - MIR SINE MIR -72 190 47 252 257 68 0 chr10 1406176 1406250 -138910515 + L1MA9 LINE L1 6057 6135 -177 786 207 112 90 chr10 1409701 1410058 -138906707 + MLT1A1 LTR MaLR 1 365 0 7176 220 113 9 chr10 1412326 1414416 -138902349 - L1PA13 LINE L1 -3979 2818 499 760 100 0 0 chr10 1414416 1414516 -138902249 + THE1C LTR MaLR 1 100 -275 6432 136 30 9 chr10 1414991 1417213 -138899552 - L1PA14 LINE L1 0 6161 3898 225 0 0 0 chr10 1418053 1418078 -138898687 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 561 167 0 0 chr10 1418900 1419002 -138897763 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 8605 204 61 16 chr10 1419108 1420626 -138896139 + L1M1 LINE L1 3344 4793 -2772 659 232 8 0 chr10 1420626 1420751 -138896014 + FLAM_A SINE Alu 2 127 -6 8605 204 61 16 chr10 1420751 1422053 -138894712 + L1M1 LINE L1 4793 6418 -1147 792 77 19 0 chr10 1422049 1422153 -138894612 + L1PA12 LINE L1 1 106 -7475 * 279 29 0 0 chr10 1422153 1422188 -138894577 - MADE1 DNA Mariner -34 46 12 246 215 115 110 chr10 1422646 1422837 -138893928 - MLT1J LTR MaLR -112 399 208 5617 205 137 49 chr10 1422843 1424708 -138892057 - L1MCa LINE L1 -4392 2034 6 382 216 11 0 chr10 1424686 1424774 -138891991 - L1M LINE L1 -766 5688 5600 * 2410 150 50 43 chr10 1424874 1425553 -138891212 - L1M4 LINE L1 -401 5777 5091 977 226 35 42 chr10 1425833 1426120 -138890645 - L1ME1 LINE L1 -18 6148 5864 2096 148 77 0 chr10 1426126 1426464 -138890301 + THE1B LTR MaLR 1 364 0 4990 90 3 1 chr10 1426464 1427128 -138889637 + THE1B-int LTR MaLR 1 665 -915 362 73 0 0 chr10 1427109 1427164 -138889601 + THE1B-int LTR MaLR 1521 1575 -5 * 191 311 49 0 chr10 1428204 1428265 -138888500 - L2 LINE L2 -8 3264 3201 247 292 109 58 chr10 1429477 1429614 -138887151 - L2 LINE L2 -1 3271 3128 299 380 0 0 chr10 1429735 1429864 -138886901 + (TGAG)n Simple_repeat Simple_repeat 4 132 0 1574 170 71 3 chr10 1432037 1432360 -138884405 - MLT1B LTR MaLR -38 352 8 21 36 0 0 chr10 1432833 1432861 -138883904 + AT_rich Low_complexity Low_complexity 1 28 0 304 271 157 52 chr10 1434173 1434383 -138882382 - L1M2 LINE L1 -5598 1251 1020 12610 34 3 2 chr10 1435829 1438036 -138878729 + L1PA4 LINE L1 3880 6090 -65 641 136 14 27 chr10 1438149 1438296 -138878469 + (TCCA)n Simple_repeat Simple_repeat 2 146 0 765 157 11 11 chr10 1438338 1438516 -138878249 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 295 252 0 103 chr10 1439153 1439260 -138877505 + MIR SINE MIR 89 184 -78 407 329 110 0 chr10 1439370 1439516 -138877249 - MIR SINE MIR -57 205 44 398 295 53 27 chr10 1439541 1439781 -138876984 + MIR SINE MIR 12 256 -6 337 301 39 0 chr10 1440246 1440349 -138876416 + MIR SINE MIR 88 194 -68 1154 163 15 0 chr10 1440553 1440756 -138876009 - L1PA15 LINE L1 -7 6158 5953 1686 162 14 0 chr10 1440857 1441141 -138875624 - MSTA LTR MaLR -140 288 1 994 162 81 0 chr10 1441304 1441501 -138875264 + AluJb SINE Alu 55 267 -45 318 286 109 8 chr10 1443234 1443353 -138873412 - MER5A DNA MER1_type -52 137 7 2070 126 0 0 chr10 1443562 1443863 -138872902 + AluSg SINE Alu 1 301 -9 5013 181 15 30 chr10 1445374 1445398 -138871367 - L1MC1 LINE L1 -6 6327 6304 3301 110 31 90 chr10 1445398 1445545 -138871220 - MER4A LTR ERV1 0 600 446 2201 75 0 0 chr10 1445545 1445850 -138870915 - AluY SINE Alu 0 307 3 3301 110 31 90 chr10 1445850 1446336 -138870429 - MER4A LTR ERV1 -154 446 3 5013 181 15 30 chr10 1446336 1447336 -138869429 - L1MC1 LINE L1 -29 6304 5319 892 264 70 98 chr10 1448563 1449105 -138867660 + MER77 LTR ERV1 79 605 0 419 210 10 0 chr10 1449641 1449741 -138867024 + CT-rich Low_complexity Low_complexity 1 101 0 270 284 0 34 chr10 1450456 1450544 -138866221 - L2 LINE L2 -3 3269 3185 209 57 29 0 chr10 1452162 1452197 -138864568 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1174 22 0 0 chr10 1453553 1453687 -138863078 + L1PA3 LINE L1 6022 6155 0 311 233 89 22 chr10 1454546 1454636 -138862129 - MIR SINE MIR -131 131 36 250 246 72 14 chr10 1454698 1454767 -138861998 - L2 LINE L2 -16 3297 3225 279 319 11 33 chr10 1455799 1455890 -138860875 + L2 LINE L2 3221 3309 -4 849 254 90 3 chr10 1456022 1456310 -138860455 + MER33 DNA MER1_type 9 321 -3 189 0 0 0 chr10 1458245 1458266 -138858499 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 267 224 149 0 chr10 1459348 1459415 -138857350 + Charlie8 DNA MER1_type 118 194 -2223 465 110 0 0 chr10 1459926 1459999 -138856766 + (CA)n Simple_repeat Simple_repeat 2 74 0 202 397 127 15 chr10 1460659 1460933 -138855832 - L2 LINE L2 0 3272 2937 1642 194 0 19 chr10 1460933 1461248 -138855517 - AluJb SINE Alu -3 309 1 202 397 127 15 chr10 1461248 1461376 -138855389 - L2 LINE L2 -335 2937 2825 7242 114 67 8 chr10 1462331 1463493 -138853272 - Tigger3b DNA MER2_type 0 1231 1 617 258 30 6 chr10 1464173 1464340 -138852425 + MER3 DNA MER1_type 35 205 -4 304 200 55 0 chr10 1466088 1466198 -138850567 + (CTGTG)n Simple_repeat Simple_repeat 4 119 0 251 261 15 0 chr10 1467524 1467589 -138849176 + L2 LINE L2 3247 3312 -1 296 320 137 23 chr10 1468735 1468910 -138847855 + MIR3 SINE MIR 6 200 -8 21 57 0 0 chr10 1469604 1469639 -138847126 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr10 1470699 1470727 -138846038 + (GA)n Simple_repeat Simple_repeat 1 28 0 1976 210 167 4 chr10 1470974 1471532 -138845233 + L1MB3 LINE L1 5534 6182 -1 522 324 0 0 chr10 1473503 1473922 -138842843 + (TATG)n Simple_repeat Simple_repeat 1 419 0 505 302 0 0 chr10 1473939 1474212 -138842553 + (TAGG)n Simple_repeat Simple_repeat 1 273 0 1818 120 31 51 chr10 1475108 1475276 -138841489 + L1PA13 LINE L1 5780 5950 -213 1988 134 10 0 chr10 1475276 1475568 -138841197 + AluSq SINE Alu 1 295 -18 1818 120 31 51 chr10 1475568 1475749 -138841016 + L1PA13 LINE L1 5950 6122 -41 261 189 0 38 chr10 1475764 1475817 -138840948 + L1PA13 LINE L1 6072 6122 -41 261 189 0 38 chr10 1475798 1475851 -138840914 + L1PA13 LINE L1 6072 6122 -41 227 226 0 38 chr10 1475866 1475919 -138840846 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1475968 1476021 -138840744 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1476002 1476055 -138840710 + L1PA13 LINE L1 6072 6122 -41 * 277 219 35 31 chr10 1476036 1476123 -138840642 + L1PA13 LINE L1 6072 6141 -22 243 208 0 38 chr10 1476138 1476191 -138840574 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1476172 1476241 -138840524 + L1PA13 LINE L1 6072 6141 -22 241 233 0 33 chr10 1476233 1476293 -138840472 + L1PA13 LINE L1 6065 6122 -41 * 227 226 0 38 chr10 1476444 1476497 -138840268 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1476478 1476547 -138840218 + L1PA13 LINE L1 6072 6141 -22 259 217 0 33 chr10 1476539 1476599 -138840166 + L1PA13 LINE L1 6065 6122 -41 * 236 211 0 39 chr10 1476580 1476632 -138840133 + L1PA13 LINE L1 6072 6121 -42 * 234 226 0 38 chr10 1476614 1476667 -138840098 + L1PA13 LINE L1 6072 6122 -41 * 246 208 0 38 chr10 1476648 1476701 -138840064 + L1PA13 LINE L1 6072 6122 -41 425 125 62 25 chr10 1476725 1476805 -138839960 + L1PA13 LINE L1 6081 6163 0 21 0 0 0 chr10 1477336 1477357 -138839408 + AT_rich Low_complexity Low_complexity 1 21 0 2110 120 0 10 chr10 1477546 1477838 -138838927 + AluSx SINE Alu 1 289 -23 659 240 0 6 chr10 1478329 1478681 -138838084 + (TG)n Simple_repeat Simple_repeat 1 349 0 586 244 66 77 chr10 1479722 1480086 -138836679 + MLT1A2 LTR MaLR 2 361 -13 245 258 61 15 chr10 1480978 1481044 -138835721 + MIR SINE MIR 55 123 -85 220 265 243 15 chr10 1481289 1481425 -138835340 + MIR SINE MIR 15 181 -81 2111 130 3 13 chr10 1481496 1481804 -138834961 + AluSx SINE Alu 1 305 -7 1711 185 7 7 chr10 1482983 1483457 -138833308 - AluJo SINE Alu 0 312 7 1102 77 0 0 chr10 1484212 1484342 -138832423 + AluYb8 SINE Alu 1 130 -188 21223 114 12 17 chr10 1484352 1487747 -138829018 + L1P LINE L1 11 3388 -2758 414 0 0 0 chr10 1489028 1489074 -138827691 + (CA)n Simple_repeat Simple_repeat 1 46 0 285 271 171 0 chr10 1489321 1489450 -138827315 - MIR SINE MIR -90 172 22 1996 196 217 10 chr10 1489782 1490390 -138826375 + L1MC1 LINE L1 5600 6333 0 1487 180 23 23 chr10 1490499 1490799 -138825966 + L1PA15 LINE L1 5865 6164 -1 2264 106 3 3 chr10 1492755 1493056 -138823709 + AluSq SINE Alu 1 301 -12 225 94 0 0 chr10 1493129 1493161 -138823604 + (TC)n Simple_repeat Simple_repeat 1 32 0 2167 85 0 41 chr10 1493775 1494070 -138822695 + AluSg SINE Alu 12 294 -16 943 151 17 6 chr10 1495200 1495379 -138821386 - MSTB LTR MaLR -245 181 1 345 273 0 0 chr10 1495688 1495816 -138820949 + (CA)n Simple_repeat Simple_repeat 2 129 0 528 258 0 0 chr10 1495839 1496017 -138820748 + (CA)n Simple_repeat Simple_repeat 1 178 0 471 50 25 12 chr10 1497603 1497683 -138819082 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 182 275 0 0 chr10 1497690 1497730 -138819035 + L2 LINE L2 3255 3294 -19 300 172 0 0 chr10 1497752 1497810 -138818955 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 1026 93 7 0 chr10 1499711 1499851 -138816914 - MER4E LTR ERV1 0 766 626 211 306 121 45 chr10 1500630 1500829 -138815936 - L2 LINE L2 -42 3271 3058 1835 112 0 79 chr10 1502138 1502468 -138814297 - AluSx SINE Alu 0 306 1 610 326 96 48 chr10 1502474 1503201 -138813564 - L2 LINE L2 -1904 1410 649 209 173 333 0 chr10 1503496 1503577 -138813188 + MER5A DNA MER1_type 61 168 -21 219 69 0 0 chr10 1506931 1506960 -138809805 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2812 73 0 19 chr10 1507043 1507412 -138809353 + L1PA7 LINE L1 5792 6153 -1 398 276 88 0 chr10 1507491 1507661 -138809104 - MER5A DNA MER1_type 0 189 5 518 206 38 19 chr10 1507823 1507983 -138808782 - L1M4 LINE L1 -945 5201 5039 253 374 12 23 chr10 1508310 1508481 -138808284 - L2 LINE L2 -529 2785 2617 383 302 94 50 chr10 1508558 1508717 -138808048 + L2 LINE L2 3104 3269 -3 560 294 109 25 chr10 1508870 1508986 -138807779 + L2 LINE L2 1809 1914 -1400 189 0 0 0 chr10 1508986 1509007 -138807758 + (TC)n Simple_repeat Simple_repeat 1 21 0 560 294 109 25 chr10 1509007 1509165 -138807600 + L2 LINE L2 1914 2106 -1208 662 207 25 0 chr10 1509166 1509287 -138807478 - FRAM SINE Alu -21 155 32 525 276 23 6 chr10 1509306 1509480 -138807285 + MER5B DNA MER1_type 1 177 -1 1504 280 149 31 chr10 1509481 1510501 -138806264 + L2 LINE L2 2110 3309 -4 183 42 0 0 chr10 1510988 1511012 -138805753 + (CAA)n Simple_repeat Simple_repeat 2 25 0 285 229 0 0 chr10 1511357 1511418 -138805347 - LTR16A LTR ERVL -9 441 381 2590 134 3 3 chr10 1511419 1511793 -138804972 - THE1C LTR MaLR 0 375 2 1120 80 11 11 chr10 1511795 1511970 -138804795 - THE1C-int LTR MaLR -1 1579 1405 * 6422 115 53 8 chr10 1511968 1512968 -138803797 - THE1C-int LTR MaLR -535 1045 1 373 143 182 0 chr10 1512979 1513056 -138803709 - THE1C LTR MaLR -149 226 136 441 229 34 34 chr10 1513056 1513235 -138803530 + (CATGT)n Simple_repeat Simple_repeat 1 179 0 29537 97 8 16 chr10 1513342 1517807 -138798958 - L1P LINE L1 -1356 4790 358 1684 57 9 26 chr10 1517921 1518149 -138798616 + L1PA8 LINE L1 5947 6170 -2 372 373 158 6 chr10 1518178 1518500 -138798265 + L2 LINE L2 2452 2822 -492 235 264 108 48 chr10 1518526 1518693 -138798072 + L2 LINE L2 3122 3298 -15 214 217 22 0 chr10 1518745 1518791 -138797974 + L2 LINE L2 3220 3266 -6 2740 236 69 42 chr10 1519753 1520761 -138796004 + L1 LINE L1 2873 3908 -2238 22288 45 0 0 chr10 1520761 1524369 -138792396 + L1PA4 LINE L1 2585 6153 -2 245 269 20 12 chr10 1524377 1524502 -138792263 + L1 LINE L1 4247 4375 -1771 315 229 123 16 chr10 1524508 1524630 -138792135 + LTR33 LTR ERVL 2 136 -385 180 77 0 0 chr10 1524732 1524758 -138792007 + (CCA)n Simple_repeat Simple_repeat 3 28 0 268 229 14 14 chr10 1526102 1526172 -138790593 + L1MCa LINE L1 20 89 -6337 23 0 0 0 chr10 1527866 1527889 -138788876 + AT_rich Low_complexity Low_complexity 1 23 0 369 305 72 18 chr10 1528388 1528611 -138788154 - MARNA DNA Mariner -166 420 186 963 184 134 20 chr10 1529424 1529625 -138787140 + MER58A DNA MER1_type 1 224 0 292 336 116 14 chr10 1530029 1530175 -138786590 - MIR3 SINE MIR -11 197 37 411 280 100 10 chr10 1530217 1530417 -138786348 - LTR33 LTR ERVL 0 521 304 183 286 54 0 chr10 1530671 1530727 -138786038 + L2 LINE L2 3255 3313 0 1535 210 12 18 chr10 1530919 1531257 -138785508 - MLT1E3 LTR MaLR 0 624 289 670 150 19 3 chr10 1531285 1531457 -138785308 - MLT1E1 LTR MaLR -424 230 5 21 0 0 0 chr10 1531555 1531576 -138785189 + AT_rich Low_complexity Low_complexity 1 21 0 229 67 0 167 chr10 1531851 1531911 -138784854 + MER50 LTR ERV1 658 707 -27 1837 155 16 13 chr10 1531936 1532246 -138784519 - AluJb SINE Alu -1 311 1 347 202 11 0 chr10 1534768 1534857 -138781908 + GA-rich Low_complexity Low_complexity 1 90 0 2446 133 14 0 chr10 1535869 1536237 -138780528 + MER83C LTR ERV1 1 373 0 4568 214 52 24 chr10 1538641 1539060 -138777705 + L1 LINE L1 3950 4355 -1791 2352 84 0 14 chr10 1539060 1539357 -138777408 + AluY SINE Alu 1 293 -18 4568 214 52 24 chr10 1539357 1540212 -138776553 + L1 LINE L1 4355 5261 -885 214 346 53 30 chr10 1540473 1540606 -138776159 + L3 LINE CR1 812 947 -630 1676 138 7 22 chr10 1541429 1541705 -138775060 - AluSx SINE Alu -6 306 35 671 283 28 31 chr10 1542457 1542830 -138773935 + L1MA9 LINE L1 5935 6306 -6 240 86 0 0 chr10 1543423 1543458 -138773307 + (CA)n Simple_repeat Simple_repeat 1 35 0 2385 100 0 3 chr10 1545777 1546087 -138770678 + AluSg SINE Alu 1 309 -1 4421 165 14 7 chr10 1549081 1549966 -138766799 + L1PB4 LINE L1 5183 6072 -84 524 233 15 0 chr10 1550068 1550201 -138766564 + L1PB4 LINE L1 6022 6156 0 209 326 45 0 chr10 1551059 1551148 -138765617 + MIR SINE MIR 117 209 -53 1754 160 13 26 chr10 1551506 1551812 -138764953 - AluJb SINE Alu -10 302 1 2252 124 0 3 chr10 1552146 1552452 -138764313 + AluSx SINE Alu 1 305 -7 542 239 6 0 chr10 1554385 1554561 -138762204 + (CA)n Simple_repeat Simple_repeat 2 178 0 542 254 3 3 chr10 1554604 1554955 -138761810 + (CA)n Simple_repeat Simple_repeat 1 351 0 202 222 0 22 chr10 1555613 1555658 -138761107 + L2 LINE L2 3261 3304 -9 345 269 148 9 chr10 1556977 1557085 -138759680 - MER5A DNA MER1_type -1 188 66 251 229 0 29 chr10 1557366 1557436 -138759329 + CT-rich Low_complexity Low_complexity 1 68 0 319 266 132 82 chr10 1557885 1558362 -138758403 - L1MEc LINE L1 -4657 1906 1406 222 272 0 26 chr10 1558520 1558709 -138758056 + CT-rich Low_complexity Low_complexity 1 184 0 210 200 32 42 chr10 1558722 1558817 -138757948 + (TCTCG)n Simple_repeat Simple_repeat 2 95 0 345 316 37 0 chr10 1559926 1560062 -138756703 + (CATG)n Simple_repeat Simple_repeat 3 143 0 315 122 0 0 chr10 1562628 1562677 -138754088 + (GA)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr10 1563128 1563156 -138753609 + (TG)n Simple_repeat Simple_repeat 1 28 0 368 230 0 6 chr10 1563947 1564125 -138752640 + CT-rich Low_complexity Low_complexity 2 178 0 323 306 183 31 chr10 1564165 1564613 -138752152 - L1MEc LINE L1 -5063 1321 806 213 146 0 0 chr10 1564657 1564705 -138752060 + (TC)n Simple_repeat Simple_repeat 1 48 0 2495 94 173 5 chr10 1566592 1567008 -138749757 + LTR19A LTR ERV1 1 486 0 873 254 139 68 chr10 1567809 1568371 -138748394 + MLT1E2 LTR MaLR 20 621 -5 26 30 0 0 chr10 1568848 1568881 -138747884 + AT_rich Low_complexity Low_complexity 1 33 0 2381 209 51 41 chr10 1568897 1569393 -138747372 - L1MC3 LINE L1 -1 7784 7294 2224 121 7 0 chr10 1569393 1569690 -138747075 - AluSx SINE Alu -13 299 1 2381 209 51 41 chr10 1569690 1569866 -138746899 - L1MC3 LINE L1 -491 7294 5648 283 329 0 0 chr10 1569868 1570026 -138746739 + (TG)n Simple_repeat Simple_repeat 2 159 0 861 231 16 0 chr10 1570041 1570240 -138746525 - L1MC/D LINE L1 -583 5572 5493 261 315 76 51 chr10 1570360 1570557 -138746208 - MIR SINE MIR -37 225 24 644 206 6 17 chr10 1571728 1571908 -138744857 + (TATG)n Simple_repeat Simple_repeat 2 179 0 184 338 73 50 chr10 1572776 1572995 -138743770 - MIR SINE MIR -14 248 25 212 310 126 0 chr10 1576267 1576354 -138740411 - L2 LINE L2 -3 3310 3213 187 266 9 9 chr10 1580250 1580359 -138736406 + (TG)n Simple_repeat Simple_repeat 1 109 0 418 313 50 0 chr10 1580359 1580519 -138736246 + (CATG)n Simple_repeat Simple_repeat 1 168 0 205 264 28 7 chr10 1580536 1580680 -138736085 + (TG)n Simple_repeat Simple_repeat 2 148 0 193 311 0 14 chr10 1580815 1580889 -138735876 - L3b LINE CR1 -210 1373 1301 1603 91 45 0 chr10 1581189 1581409 -138735356 - MER30 DNA MER1_type 0 230 1 1921 166 0 3 chr10 1583085 1583386 -138733379 - AluSx SINE Alu -12 300 1 231 269 83 9 chr10 1587413 1587521 -138729244 + L1ME4a LINE L1 6006 6121 0 225 301 88 37 chr10 1587723 1587939 -138728826 - L2 LINE L2 -215 3098 2872 * 310 288 64 0 chr10 1587915 1588040 -138728725 - L2 LINE L2 -1579 1735 1603 516 183 39 0 chr10 1588494 1588598 -138728167 - MLT1F1 LTR MaLR -3 564 457 3304 138 25 6 chr10 1588624 1589138 -138727627 - MER1A DNA MER1_type -5 524 1 23 0 0 0 chr10 1589587 1589610 -138727155 + AT_rich Low_complexity Low_complexity 1 23 0 345 269 32 11 chr10 1593181 1593274 -138723491 + MIR SINE MIR 124 218 -44 181 228 158 79 chr10 1596044 1596145 -138720620 + MIR SINE MIR 18 126 -82 1172 99 0 0 chr10 1596797 1596939 -138719826 - AluSq/x SINE Alu -170 142 1 256 250 65 46 chr10 1599100 1599208 -138717557 + MER5A DNA MER1_type 59 168 -21 667 166 24 19 chr10 1601276 1601468 -138715297 + GA-rich Low_complexity Low_complexity 1 190 -237 186 43 0 0 chr10 1601468 1601491 -138715274 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 667 166 24 19 chr10 1601491 1601701 -138715064 + GA-rich Low_complexity Low_complexity 190 427 0 189 300 89 11 chr10 1603206 1603296 -138713469 + L2 LINE L2 1354 1450 -1864 588 218 0 0 chr10 1603583 1603757 -138713008 + (CA)n Simple_repeat Simple_repeat 1 174 0 225 163 61 0 chr10 1603758 1603807 -138712958 - MLT1B LTR MaLR -336 54 3 328 296 138 0 chr10 1605346 1605505 -138711260 - MIR SINE MIR -64 198 18 247 202 18 175 chr10 1605507 1605621 -138711144 + MER58 DNA MER1_type 1 96 -119 418 214 41 0 chr10 1605625 1605723 -138711042 + MER58 DNA MER1_type 2318 2419 -1 2496 67 0 0 chr10 1607464 1607762 -138709003 + AluY SINE Alu 1 298 -13 235 273 68 0 chr10 1609182 1609270 -138707495 + LTR33 LTR ERVL 2 95 -426 273 274 53 0 chr10 1610839 1610952 -138705813 + LTR33 LTR ERVL 385 503 -18 537 239 8 0 chr10 1611387 1611504 -138705261 - AluSg/x SINE Alu -21 289 172 744 242 15 14 chr10 1611900 1612193 -138704572 + L1ME1 LINE L1 2286 2576 -3806 3614 274 84 19 chr10 1612196 1612295 -138704470 + L1ME1 LINE L1 2802 2893 -3489 2141 118 14 0 chr10 1612295 1612582 -138704183 - AluSc SINE Alu -18 291 1 3614 274 84 19 chr10 1612582 1614225 -138702540 + L1ME1 LINE L1 2893 4658 -1724 1342 184 0 0 chr10 1614236 1614453 -138702312 - AluJb SINE Alu 0 312 96 2684 231 66 32 chr10 1614489 1615639 -138701126 + L1ME1 LINE L1 4674 5855 -547 805 327 18 3 chr10 1615786 1616119 -138700646 + L1ME1 LINE L1 5891 6228 -174 529 229 88 35 chr10 1616761 1616902 -138699863 - MIR SINE MIR -72 190 37 1642 203 3 16 chr10 1616902 1617246 -138699519 + AluJb SINE Alu 6 312 0 529 229 88 35 chr10 1617246 1617274 -138699491 - MIR SINE MIR -225 37 12 24 0 0 0 chr10 1617597 1617621 -138699144 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 1617908 1617938 -138698827 + AT_rich Low_complexity Low_complexity 1 30 0 259 114 0 0 chr10 1619770 1619814 -138696951 - HSMAR1 DNA Mariner -1243 44 1 184 321 57 0 chr10 1622132 1622185 -138694580 - MIR3 SINE MIR -48 160 105 330 328 103 29 chr10 1623110 1623314 -138693451 - L2 LINE L2 -1 3312 3094 1998 120 0 11 chr10 1623653 1623971 -138692794 + AluSg SINE Alu 33 310 0 222 222 0 19 chr10 1624157 1624211 -138692554 + CT-rich Low_complexity Low_complexity 1 53 0 322 261 13 21 chr10 1625187 1625427 -138691338 + (CA)n Simple_repeat Simple_repeat 1 237 0 1575 215 35 81 chr10 1625747 1626243 -138690522 + MLT2B1 LTR ERVL 1 518 -2 1055 206 59 0 chr10 1626243 1626462 -138690303 + MER46A DNA MER2_type 1 232 -4 796 74 8 8 chr10 1626470 1626592 -138690173 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 1575 215 35 81 chr10 1626592 1626631 -138690134 + MLT2B1 LTR ERVL 481 520 0 1970 159 10 0 chr10 1629181 1629476 -138687289 + AluJb SINE Alu 1 298 -14 207 162 35 35 chr10 1629615 1629788 -138686977 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 171 57 0 chr10 1629801 1629889 -138686876 + (TA)n Simple_repeat Simple_repeat 1 93 0 505 320 39 11 chr10 1631502 1631683 -138685082 - MIR SINE MIR -10 252 67 2086 89 7 14 chr10 1632508 1632822 -138683943 + AluSg SINE Alu 1 312 0 268 31 0 0 chr10 1632790 1632842 -138683923 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 271 234 0 0 chr10 1633030 1633077 -138683688 - L3 LINE CR1 -112 1465 1419 252 137 0 0 chr10 1633582 1633633 -138683132 + (CA)n Simple_repeat Simple_repeat 2 52 0 2254 107 0 0 chr10 1634677 1634968 -138681797 + AluSx SINE Alu 1 291 -21 285 340 97 0 chr10 1635146 1635249 -138681516 + L2 LINE L2 3199 3311 -2 21 0 0 0 chr10 1635511 1635532 -138681233 + AT_rich Low_complexity Low_complexity 1 21 0 347 211 0 7 chr10 1635635 1635782 -138680983 + (CA)n Simple_repeat Simple_repeat 2 147 0 302 297 159 12 chr10 1635962 1636128 -138680637 - MIR SINE MIR -58 150 14 285 217 86 99 chr10 1638887 1639039 -138677726 - L2 LINE L2 -93 3179 3030 180 219 0 0 chr10 1640267 1640308 -138676457 + (TG)n Simple_repeat Simple_repeat 1 41 0 308 330 23 0 chr10 1640321 1640409 -138676356 - L1MC4 LINE L1 -1339 6703 6614 225 186 71 29 chr10 1640410 1640480 -138676285 + L1MCa LINE L1 1996 2068 -4358 248 264 0 9 chr10 1640482 1640592 -138676173 + (TATG)n Simple_repeat Simple_repeat 4 112 0 332 246 107 3 chr10 1643108 1643272 -138673493 + MER67D LTR ERV1 274 514 0 353 175 10 0 chr10 1644386 1644489 -138672276 + (CA)n Simple_repeat Simple_repeat 1 104 0 540 200 0 0 chr10 1644551 1644731 -138672034 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 191 0 22 chr10 1644762 1644945 -138671820 + (CA)n Simple_repeat Simple_repeat 2 180 0 275 372 40 0 chr10 1645349 1645548 -138671217 + Charlie8 DNA MER1_type 26 232 -2185 215 291 18 0 chr10 1647841 1647896 -138668869 - MIR SINE MIR -64 144 89 330 26 0 0 chr10 1648310 1648349 -138668416 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 363 71 0 chr10 1648815 1648928 -138667837 + MIR SINE MIR 48 168 -94 200 238 95 71 chr10 1650150 1650276 -138666489 + MIR SINE MIR 24 152 -110 630 203 68 0 chr10 1651003 1651121 -138665644 - FLAM_A SINE Alu -7 126 1 426 207 0 0 chr10 1653709 1653791 -138662974 - MER94 DNA DNA -52 82 1 498 380 22 0 chr10 1655955 1656139 -138660626 + MIR3 SINE MIR 14 201 -7 196 303 278 25 chr10 1657522 1657684 -138659081 - MIR SINE MIR -28 234 32 21 0 0 0 chr10 1659157 1659178 -138657587 + AT_rich Low_complexity Low_complexity 1 21 0 192 200 0 0 chr10 1659651 1659711 -138657054 + (TG)n Simple_repeat Simple_repeat 1 60 0 2180 112 14 0 chr10 1661500 1661794 -138654971 - AluSx SINE Alu -12 300 3 23 33 0 0 chr10 1662094 1662124 -138654641 + AT_rich Low_complexity Low_complexity 1 30 0 2649 127 33 55 chr10 1663452 1663908 -138652857 - MER83 LTR ERV1 -2 446 1 340 291 108 54 chr10 1664029 1664324 -138652441 - L1MC4a LINE L1 -1934 5874 5564 223 26 77 0 chr10 1664449 1664488 -138652277 + T-rich Low_complexity Low_complexity 1 42 0 2295 168 8 0 chr10 1665486 1665873 -138650892 + MLT1B LTR MaLR 1 390 0 290 259 63 63 chr10 1666004 1666162 -138650603 + Charlie5 DNA MER1_type 2440 2597 -15 198 0 0 0 chr10 1666370 1666392 -138650373 + (TG)n Simple_repeat Simple_repeat 1 22 0 257 303 55 28 chr10 1666444 1666553 -138650212 + L2 LINE L2 3199 3310 -3 1597 21 0 16 chr10 1669796 1669986 -138646779 - L1PA4 LINE L1 -4 6151 5965 287 274 129 16 chr10 1671502 1671626 -138645139 - MER103 DNA DNA -12 154 17 210 91 0 0 chr10 1672100 1672133 -138644632 + (T)n Simple_repeat Simple_repeat 1 33 0 447 159 0 28 chr10 1672396 1672503 -138644262 + CT-rich Low_complexity Low_complexity 3 106 0 1994 159 7 0 chr10 1672511 1672819 -138643946 - AluSx SINE Alu 0 312 3 210 143 0 0 chr10 1672996 1673031 -138643734 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 180 0 0 0 chr10 1673919 1673939 -138642826 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1897 127 0 12 chr10 1673948 1674207 -138642558 - AluSx SINE Alu -56 256 1 4661 154 47 9 chr10 1674469 1675465 -138641300 + L1PA16 LINE L1 5118 6161 -5 254 57 0 0 chr10 1675465 1675500 -138641265 + L1PA16 LINE L1 6127 6161 -5 237 286 0 59 chr10 1677841 1677882 -138638883 + (CATATA)n Simple_repeat Simple_repeat 3 45 -69 183 80 0 0 chr10 1677882 1677907 -138638858 + (CA)n Simple_repeat Simple_repeat 2 26 0 237 286 0 59 chr10 1677907 1677984 -138638781 + (CATATA)n Simple_repeat Simple_repeat 45 114 0 248 307 72 42 chr10 1678327 1678493 -138638272 + MIR3 SINE MIR 14 184 -24 671 207 0 0 chr10 1678970 1679091 -138637674 + MLT1B LTR MaLR 1 121 -269 415 233 103 0 chr10 1679837 1679953 -138636812 + MIR SINE MIR 133 260 -2 281 267 27 0 chr10 1681933 1682008 -138634757 + L2 LINE L2 3191 3267 -5 273 147 29 15 chr10 1687117 1687185 -138629580 + (TA)n Simple_repeat Simple_repeat 2 70 0 180 0 0 0 chr10 1689235 1689255 -138627510 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 1689825 1689846 -138626919 + AT_rich Low_complexity Low_complexity 1 21 0 449 238 156 0 chr10 1693630 1693752 -138623013 + MIR SINE MIR 36 176 -86 316 292 128 32 chr10 1695452 1695671 -138621094 - MIR SINE MIR -21 241 2 1789 110 0 0 chr10 1696854 1697119 -138619646 + AluSx SINE Alu 50 314 0 1078 164 5 21 chr10 1701629 1701818 -138614947 + AluJb SINE Alu 34 219 -93 1901 270 28 24 chr10 1703099 1703681 -138613084 + L1MC2 LINE L1 156 739 -5825 783 175 81 6 chr10 1703681 1703841 -138612924 + MER30B DNA MER1_type 19 190 0 3685 196 57 21 chr10 1703888 1705060 -138611705 + L1MC2 LINE L1 574 1802 -4762 * 4762 178 39 24 chr10 1705047 1705145 -138611620 + L1MC2 LINE L1 5609 5704 -1058 2517 8 0 0 chr10 1705145 1705413 -138611352 + AluY SINE Alu 44 311 0 4762 178 39 24 chr10 1705413 1706353 -138610412 + L1MC2 LINE L1 5704 6664 -98 282 329 0 0 chr10 1707058 1707140 -138609625 + MER5B DNA MER1_type 97 178 0 230 140 40 140 chr10 1709886 1709986 -138606779 + MER39 LTR ERV1 62 151 -556 486 0 0 0 chr10 1710567 1710621 -138606144 + (CA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr10 1711201 1711223 -138605542 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 1711661 1711693 -138605072 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 273 176 0 88 chr10 1711696 1711798 -138604967 + L1MC4 LINE L1 6611 6703 -1339 285 288 0 0 chr10 1762549 1762622 -138554143 + (TA)n Simple_repeat Simple_repeat 2 74 0 1670 53 5 0 chr10 1763255 1763461 -138553304 - AluY SINE Alu -3 308 102 1772 140 19 0 chr10 1763978 1764242 -138552523 - AluSg SINE Alu -18 292 24 1537 165 38 52 chr10 1764272 1764563 -138552202 - AluJb SINE Alu -25 287 1 23 0 0 0 chr10 1764752 1764775 -138551990 + AT_rich Low_complexity Low_complexity 1 23 0 1772 111 96 4 chr10 1764803 1765096 -138551669 + AluSp SINE Alu 1 317 0 2482 129 26 7 chr10 1765836 1766263 -138550502 + MER83 LTR ERV1 5 439 -9 266 226 73 15 chr10 1766398 1766535 -138550230 - L1ME4a LINE L1 -210 5911 5767 30 69 0 0 chr10 1766538 1766596 -138550169 + AT_rich Low_complexity Low_complexity 1 58 0 29 0 0 0 chr10 1766683 1766712 -138550053 + AT_rich Low_complexity Low_complexity 1 29 0 309 240 39 19 chr10 1766762 1766884 -138549881 - L1MC2 LINE L1 -10 6334 6206 4641 200 23 11 chr10 1766980 1768448 -138548317 - L1MC3 LINE L1 -109 8487 5535 1202 149 8 56 chr10 1768448 1768716 -138548049 - MER44D DNA MER2_type -84 525 1 441 246 0 0 chr10 1769774 1769908 -138546857 + (CA)n Simple_repeat Simple_repeat 1 134 0 180 122 163 0 chr10 1770294 1770343 -138546422 - MER5C DNA MER1_type -226 98 42 570 169 0 0 chr10 1770538 1770656 -138546109 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 321 226 10 10 chr10 1770659 1770761 -138546004 - L1MC2 LINE L1 -2337 5471 5370 252 86 0 0 chr10 1770975 1771010 -138545755 + (TG)n Simple_repeat Simple_repeat 1 35 0 1079 204 18 18 chr10 1772227 1772507 -138544258 + L1 LINE L1 4000 4279 -1867 322 337 69 31 chr10 1772552 1772843 -138543922 - L1MC3 LINE L1 -1863 5094 4793 249 280 94 24 chr10 1772912 1773241 -138543524 - L1MC3 LINE L1 -2406 4551 4200 261 165 44 22 chr10 1773276 1773367 -138543398 + (TA)n Simple_repeat Simple_repeat 2 94 0 242 276 25 45 chr10 1773392 1773591 -138543174 - L1MC3 LINE L1 -2832 4125 3931 22 56 0 0 chr10 1773925 1773961 -138542804 + AT_rich Low_complexity Low_complexity 1 36 0 1353 167 85 35 chr10 1774000 1774282 -138542483 + AluJb SINE Alu 3 298 -14 28 61 0 0 chr10 1775089 1775138 -138541627 + AT_rich Low_complexity Low_complexity 1 49 0 2385 26 0 13 chr10 1776123 1776427 -138540338 - L1PA4 LINE L1 -181 5974 5675 1283 67 0 46 chr10 1776427 1776654 -138540111 + L1PA4 LINE L1 5970 6155 0 24 32 0 0 chr10 1778832 1778863 -138537902 + AT_rich Low_complexity Low_complexity 1 31 0 824 55 31 0 chr10 1780155 1780282 -138536483 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1810 163 25 0 chr10 1780340 1780623 -138536142 + AluSx SINE Alu 1 290 -22 1211 156 20 8 chr10 1780988 1781238 -138535527 - L1MA4 LINE L1 0 6300 6048 21 0 0 0 chr10 1781556 1781577 -138535188 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 1782380 1782401 -138534364 + AT_rich Low_complexity Low_complexity 1 21 0 785 302 121 6 chr10 1783416 1784094 -138532671 - L1MC3 LINE L1 -3161 3796 3041 450 293 87 16 chr10 1784535 1785056 -138531709 - L1MC3 LINE L1 -4471 2486 1971 338 242 123 76 chr10 1785064 1785366 -138531399 - L1MC3 LINE L1 -5046 1914 1599 186 393 0 22 chr10 1785397 1785486 -138531279 - L2 LINE L2 -43 3229 3143 1320 179 126 60 chr10 1785721 1786176 -138530589 - L1MA9 LINE L1 -4 6308 5825 1060 279 61 0 chr10 1789421 1789797 -138526968 - L1MC3 LINE L1 -6086 773 375 233 296 20 0 chr10 1789913 1790011 -138526754 - L1MC3 LINE L1 -6457 402 303 2097 118 28 0 chr10 1790193 1790480 -138526285 + AluSx SINE Alu 1 295 -17 24 77 0 0 chr10 1790947 1790999 -138525766 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr10 1791526 1791548 -138525217 + (T)n Simple_repeat Simple_repeat 1 22 0 1601 193 11 0 chr10 1792401 1792686 -138524079 + AluJo SINE Alu 5 292 -20 385 295 46 18 chr10 1793681 1793966 -138522799 + HAL1 LINE L1 993 1285 -1222 22 0 0 0 chr10 1796614 1796636 -138520129 + AT_rich Low_complexity Low_complexity 1 22 0 2131 125 0 3 chr10 1796638 1796941 -138519824 + AluSx SINE Alu 1 302 -10 254 226 0 10 chr10 1797126 1797228 -138519537 + (CAT)n Simple_repeat Simple_repeat 2 102 0 4475 211 50 16 chr10 1798188 1799327 -138517438 + L1MC2 LINE L1 19 1196 -5230 6861 240 34 41 chr10 1799333 1799737 -138517028 + L1MC2 LINE L1 2756 3161 -3463 2099 150 3 6 chr10 1799737 1800050 -138516715 + AluSx SINE Alu 1 312 0 6861 240 34 41 chr10 1800050 1802288 -138514477 + L1MC2 LINE L1 3161 5365 -1259 2195 98 10 14 chr10 1802288 1802583 -138514182 - AluSg1 SINE Alu -15 294 1 6861 240 34 41 chr10 1802583 1803386 -138513379 + L1MC2 LINE L1 5365 6172 -452 2554 180 19 6 chr10 1803386 1803903 -138512862 + L1MC1 LINE L1 5810 6333 0 22 35 0 0 chr10 1804996 1805025 -138511740 + AT_rich Low_complexity Low_complexity 1 29 0 7254 39 2 2 chr10 1805324 1806572 -138510193 - L1PA5 LINE L1 -4 6150 4904 260 322 63 24 chr10 1806816 1807071 -138509694 + MLT2E LTR ERVL 342 606 -22 2215 116 0 0 chr10 1807648 1807940 -138508825 + AluSx SINE Alu 5 296 -16 612 211 7 26 chr10 1809848 1810000 -138506765 + MLT2B2 LTR ERVL 1 149 -366 1491 243 39 0 chr10 1810299 1810711 -138506054 + MLT2B1 LTR ERVL 91 518 -2 222 37 0 0 chr10 1811125 1811152 -138505613 + (CA)n Simple_repeat Simple_repeat 1 27 0 2002 145 3 0 chr10 1811183 1811490 -138505275 + AluSx SINE Alu 1 308 0 1389 239 19 3 chr10 1813309 1813681 -138503084 - MLT1B LTR MaLR -7 383 6 364 259 130 12 chr10 1813734 1813896 -138502869 + MLT1G1 LTR MaLR 27 207 -388 788 118 8 0 chr10 1815154 1815281 -138501484 + (TTCC)n Simple_repeat Simple_repeat 2 129 0 7457 135 2 1 chr10 1815317 1816533 -138500232 + L1P LINE L1 3518 4735 -1411 252 0 0 0 chr10 1817127 1817155 -138499610 + (T)n Simple_repeat Simple_repeat 1 28 0 246 266 0 0 chr10 1817765 1817844 -138498921 + (CA)n Simple_repeat Simple_repeat 1 79 0 345 269 128 13 chr10 1818940 1819089 -138497676 - L1MC/D LINE L1 -2332 5476 5311 21 36 0 0 chr10 1819099 1819127 -138497638 + AT_rich Low_complexity Low_complexity 1 28 0 209 204 0 61 chr10 1819326 1819375 -138497390 - L2 LINE L2 -81 3232 3187 279 318 29 6 chr10 1819917 1820090 -138496675 + L1MC4a LINE L1 5731 5907 -437 345 301 33 20 chr10 1820124 1820277 -138496488 + L1ME1 LINE L1 5991 6145 -21 403 243 130 40 chr10 1820285 1820462 -138496303 + L1MC4a LINE L1 6171 6363 -1445 314 165 37 11 chr10 1820616 1820712 -138496053 + L1MC4a LINE L1 6523 6615 -1193 425 317 20 24 chr10 1820832 1821094 -138495671 + L1MC4a LINE L1 6587 6904 -939 2279 263 58 22 chr10 1821233 1822957 -138493808 + L1MCb LINE L1 122 2019 -4545 6186 275 50 29 chr10 1823108 1823399 -138493366 + L1MCb LINE L1 2305 2588 -4090 2722 31 0 0 chr10 1823399 1823719 -138493046 - L1PA4 LINE L1 -3 6152 5833 6186 275 50 29 chr10 1823719 1825340 -138491425 + L1MCb LINE L1 2588 4174 -2504 1614 170 0 47 chr10 1825340 1825658 -138491107 + AluJb SINE Alu 8 310 -2 6186 275 50 29 chr10 1825658 1827291 -138489474 + L1MCb LINE L1 4174 5920 -758 2300 111 0 0 chr10 1827438 1827744 -138489021 - AluSq SINE Alu -6 307 2 2195 96 7 0 chr10 1829584 1829887 -138486878 - AluSg SINE Alu -5 305 1 474 228 43 47 chr10 1830754 1830986 -138485779 - MER76 LTR ERV -457 231 1 601 333 51 30 chr10 1831002 1831338 -138485427 + L2 LINE L2 2261 2603 -711 343 325 32 0 chr10 1833322 1833448 -138483317 - MIR SINE MIR -117 145 16 28 107 0 0 chr10 1833789 1833901 -138482864 + AT_rich Low_complexity Low_complexity 1 112 0 299 234 0 39 chr10 1834299 1834376 -138482389 + GA-rich Low_complexity Low_complexity 3 76 0 1378 216 28 48 chr10 1834774 1834958 -138481807 + MLT1C LTR MaLR 1 187 -280 2544 74 0 0 chr10 1834958 1835269 -138481496 + AluY SINE Alu 1 311 0 1378 216 28 48 chr10 1835269 1835546 -138481219 + MLT1C LTR MaLR 187 453 -14 461 299 65 23 chr10 1836326 1836677 -138480088 - LTR16C LTR ERVL -2 489 124 1873 143 0 34 chr10 1837192 1837516 -138479249 - AluSx SINE Alu 0 314 1 224 291 0 0 chr10 1838029 1838084 -138478681 + L2 LINE L2 3253 3307 -6 205 161 0 0 chr10 1838086 1838117 -138478648 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2207 124 0 0 chr10 1838702 1839009 -138477756 + AluSg SINE Alu 1 307 -3 216 314 0 0 chr10 1844558 1844628 -138472137 + A-rich Low_complexity Low_complexity 2 71 0 204 245 0 0 chr10 1844729 1844778 -138471987 + A-rich Low_complexity Low_complexity 1 49 0 1843 158 0 7 chr10 1845453 1845756 -138471009 - AluJo SINE Alu -11 301 1 700 193 0 8 chr10 1845975 1846094 -138470671 + AluJb SINE Alu 12 129 -183 327 203 0 0 chr10 1846423 1846492 -138470273 + (CA)n Simple_repeat Simple_repeat 2 70 0 2843 200 38 22 chr10 1846518 1847233 -138469532 - ERVL LTR ERVL -1934 3830 3105 318 50 0 0 chr10 1847239 1847279 -138469486 + (CA)n Simple_repeat Simple_repeat 2 41 0 798 251 45 0 chr10 1847294 1847517 -138469248 - MLT2C2 LTR ERVL -231 233 1 1602 179 55 10 chr10 1847544 1847834 -138468931 + AluJb SINE Alu 1 303 -9 313 322 43 6 chr10 1848357 1848693 -138468072 + L1ME LINE L1 5155 5501 -663 2293 108 0 0 chr10 1848988 1849285 -138467480 - AluSq SINE Alu -16 297 1 225 0 0 0 chr10 1849405 1849430 -138467335 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 184 299 62 31 chr10 1851038 1851135 -138465630 - MIR SINE MIR -85 177 78 264 352 16 16 chr10 1851398 1851526 -138465239 - MIR SINE MIR -118 144 17 1749 163 36 28 chr10 1851649 1852121 -138464644 - MLT2A2 LTR ERVL -81 461 1 936 225 55 37 chr10 1852415 1852795 -138463970 - L1MA9 LINE L1 -25 6266 5859 190 54 27 27 chr10 1853108 1853145 -138463620 + (TAA)n Simple_repeat Simple_repeat 3 39 0 457 257 0 0 chr10 1853147 1853260 -138463505 + L1M2 LINE L1 5681 5793 -519 225 182 15 30 chr10 1853753 1853819 -138462946 - Charlie5 DNA MER1_type -129 2483 2419 1434 94 0 0 chr10 1853824 1854016 -138462749 + L1PA7 LINE L1 5950 6141 -13 232 241 0 0 chr10 1857392 1857446 -138459319 - MIR SINE MIR -26 236 183 994 270 59 28 chr10 1857983 1858336 -138458429 - L1MB2 LINE L1 -38 6133 5768 675 306 65 7 chr10 1858364 1858639 -138458126 - L2 LINE L2 -1005 2309 2019 225 0 100 0 chr10 1861433 1861473 -138455292 + T-rich Low_complexity Low_complexity 2 45 0 21 57 0 0 chr10 1861768 1861803 -138454962 + AT_rich Low_complexity Low_complexity 1 35 0 258 259 86 25 chr10 1862522 1862684 -138454081 - L1MB2 LINE L1 -1501 4645 4474 201 133 0 0 chr10 1862809 1862839 -138453926 + (TC)n Simple_repeat Simple_repeat 1 30 0 2043 81 11 0 chr10 1863370 1863631 -138453134 + AluSq SINE Alu 1 264 -49 352 257 71 0 chr10 1863936 1864076 -138452689 - L1MB2 LINE L1 -2222 3924 3775 434 261 62 26 chr10 1864776 1864971 -138451794 + MER3 DNA MER1_type 1 202 -7 22 0 0 0 chr10 1865160 1865182 -138451583 + AT_rich Low_complexity Low_complexity 1 22 0 2332 106 3 0 chr10 1867130 1867432 -138449333 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr10 1870013 1870041 -138446724 + AT_rich Low_complexity Low_complexity 1 28 0 902 186 0 0 chr10 1870075 1870236 -138446529 + MER2 DNA MER2_type 3 163 -182 363 307 85 28 chr10 1872678 1872890 -138443875 - MIR SINE MIR -12 250 27 234 91 0 0 chr10 1874462 1874495 -138442270 + (TG)n Simple_repeat Simple_repeat 2 34 0 916 99 0 23 chr10 1875036 1875167 -138441598 + Charlie3 DNA MER1_type 2347 2474 -236 624 322 120 7 chr10 1875192 1875651 -138441114 + L2 LINE L2 1415 1925 -1389 421 227 104 25 chr10 1877299 1877462 -138439303 - MLT1F LTR MaLR -8 534 359 192 125 0 0 chr10 1878451 1878483 -138438282 + (A)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr10 1878603 1878633 -138438132 + AT_rich Low_complexity Low_complexity 1 30 0 1431 175 137 30 chr10 1879304 1879641 -138437124 - THE1C LTR MaLR -2 373 1 856 210 0 0 chr10 1879834 1880001 -138436764 - AluJb SINE Alu -9 303 137 192 40 0 0 chr10 1880671 1880696 -138436069 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 213 196 0 0 chr10 1881158 1881204 -138435561 + (CA)n Simple_repeat Simple_repeat 2 47 0 2130 125 3 0 chr10 1881692 1881987 -138434778 - AluSg SINE Alu -14 296 1 328 228 139 0 chr10 1883716 1883817 -138432948 + MLT1E LTR MaLR 22 136 -457 837 236 75 12 chr10 1883901 1884142 -138432623 + MLT1E LTR MaLR 289 544 -49 522 304 34 29 chr10 1884210 1884417 -138432348 + MIR SINE MIR 23 230 -32 686 268 115 102 chr10 1885668 1887237 -138429528 - HAL1 LINE L1 -110 2397 808 279 328 86 27 chr10 1887669 1887855 -138428910 - MIR SINE MIR -19 243 47 470 128 0 70 chr10 1888392 1888478 -138428287 + MADE1 DNA Mariner 1 80 0 4588 51 45 4 chr10 1888550 1889103 -138427662 - L1PA7 LINE L1 -7 6147 5572 208 312 9 64 chr10 1890014 1890123 -138426642 + MIR SINE MIR 45 147 -61 216 319 104 52 chr10 1890774 1890909 -138425856 + MIR SINE MIR 47 188 -74 2158 228 84 16 chr10 1891880 1892485 -138424280 + L1MB5 LINE L1 5529 6174 0 294 50 0 0 chr10 1892502 1892542 -138424223 + L1MB4 LINE L1 6139 6178 -2 371 73 18 0 chr10 1892543 1892598 -138424167 - Alu SINE Alu -1 300 245 2324 96 0 0 chr10 1892716 1893018 -138423747 - AluY SINE Alu -8 303 2 207 0 0 0 chr10 1893617 1893640 -138423125 + (T)n Simple_repeat Simple_repeat 1 23 0 643 274 96 5 chr10 1893810 1894029 -138422736 - MIR SINE MIR -20 242 4 231 277 69 40 chr10 1895127 1895228 -138421537 - MER5A DNA MER1_type -48 141 38 188 286 58 52 chr10 1895329 1895483 -138421282 - MIR SINE MIR -106 156 2 31 58 0 0 chr10 1896519 1896571 -138420194 + AT_rich Low_complexity Low_complexity 1 52 0 225 57 38 57 chr10 1897129 1897182 -138419583 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 581 106 33 50 chr10 1897215 1897395 -138419370 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 598 115 59 49 chr10 1897409 1897882 -138418883 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 1723 177 0 19 chr10 1898011 1898322 -138418443 + AluJb SINE Alu 7 311 -1 302 80 20 0 chr10 1899242 1899292 -138417473 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 554 0 15 0 chr10 1899325 1899391 -138417374 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 315 0 0 0 chr10 1899901 1899936 -138416829 + (CA)n Simple_repeat Simple_repeat 2 36 0 364 181 60 45 chr10 1900368 1900501 -138416264 - LTR16A1 LTR ERVL -1 456 322 206 246 44 9 chr10 1900998 1901112 -138415653 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 258 250 34 34 chr10 1901124 1901300 -138415465 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 359 322 28 17 chr10 1901579 1901592 -138415173 + MIR SINE MIR 77 88 -174 1860 162 88 20 chr10 1901592 1901943 -138414822 + THE1C LTR MaLR 1 375 0 359 322 28 17 chr10 1901943 1902109 -138414656 + MIR SINE MIR 88 258 -4 2247 105 3 16 chr10 1902664 1902970 -138413795 + AluSx SINE Alu 1 302 -10 61 37 0 0 chr10 1904330 1904412 -138412353 + AT_rich Low_complexity Low_complexity 1 82 0 24 0 0 0 chr10 1904955 1904979 -138411786 + AT_rich Low_complexity Low_complexity 1 24 0 3316 109 10 41 chr10 1904990 1905505 -138411260 - L1MA1 LINE L1 -4 6298 5800 701 139 9 5 chr10 1905541 1905670 -138411095 - L1ME LINE L1 -358 5806 5676 541 92 26 13 chr10 1907175 1907251 -138409514 - MADE1 DNA Mariner 0 80 4 21 36 0 0 chr10 1907256 1907284 -138409481 + AT_rich Low_complexity Low_complexity 1 28 0 319 298 30 23 chr10 1907344 1907475 -138409290 - MER115 DNA AcHobo -11 682 551 859 140 0 22 chr10 1908543 1908679 -138408086 + AluSq/x SINE Alu 1 133 -179 2123 126 0 31 chr10 1908681 1908998 -138407767 + AluSx SINE Alu 1 307 -5 675 282 78 3 chr10 1910016 1910364 -138406401 - LTR16A LTR ERVL -20 430 57 23 68 0 0 chr10 1911152 1911196 -138405569 + AT_rich Low_complexity Low_complexity 1 44 0 836 263 127 58 chr10 1911780 1912213 -138404552 + MLT1C LTR MaLR 1 463 -4 1982 234 29 29 chr10 1912217 1912651 -138404114 + MLT1C-int LTR MaLR 1 414 -957 2001 112 63 0 chr10 1912651 1912936 -138403829 + AluSc SINE Alu 1 303 -6 1982 234 29 29 chr10 1912936 1913174 -138403591 + MLT1C-int LTR MaLR 414 650 -721 1106 256 86 14 chr10 1913245 1913593 -138403172 + MLT1C-int LTR MaLR 974 1346 -25 1088 228 66 89 chr10 1913604 1914074 -138402691 + MLT1C LTR MaLR 1 459 -8 213 338 0 0 chr10 1914117 1914194 -138402571 + MIR SINE MIR 67 143 -65 21 36 0 0 chr10 1915003 1915031 -138401734 + AT_rich Low_complexity Low_complexity 1 28 0 2469 101 51 25 chr10 1915127 1915482 -138401283 - THE1B LTR MaLR 0 364 1 2188 118 7 7 chr10 1915714 1916020 -138400745 - AluSc SINE Alu -3 306 1 29 28 0 0 chr10 1916248 1916284 -138400481 + AT_rich Low_complexity Low_complexity 1 36 0 259 269 219 17 chr10 1917748 1917986 -138398779 - L2 LINE L2 -2740 574 289 1432 247 31 3 chr10 1919667 1920019 -138396746 + MLT1A1 LTR MaLR 1 362 -3 1857 145 16 10 chr10 1920797 1920865 -138395900 - AluSx SINE Alu 0 589 523 1114 47 0 62 chr10 1920865 1921057 -138395708 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1857 145 16 10 chr10 1921057 1921384 -138395381 - AluSx SINE Alu -66 523 1 21 0 0 0 chr10 1923233 1923254 -138393511 + AT_rich Low_complexity Low_complexity 1 21 0 1935 174 12 26 chr10 1923254 1923678 -138393087 - L1MA7 LINE L1 0 6291 5874 2004 116 17 33 chr10 1923964 1924265 -138392500 + AluJb SINE Alu 3 298 -14 232 309 0 0 chr10 1924579 1924663 -138392102 + (TA)n Simple_repeat Simple_repeat 2 85 0 1471 134 138 79 chr10 1925226 1925517 -138391248 - AluJb SINE Alu -4 308 1 351 286 64 26 chr10 1925887 1926153 -138390612 + MLT1H LTR MaLR 72 347 -202 263 116 0 0 chr10 1926239 1926282 -138390483 + MLT1H LTR MaLR 485 527 -22 253 359 0 9 chr10 1926577 1926683 -138390082 + MLT1-int LTR MaLR 441 545 -826 210 71 0 0 chr10 1928550 1928578 -138388187 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 389 300 47 107 chr10 1929087 1929387 -138387378 + L1ME3 LINE L1 248 529 -6078 1203 284 55 22 chr10 1929470 1930105 -138386660 + L1ME1 LINE L1 5506 6161 -5 978 236 28 31 chr10 1930113 1930486 -138386279 + L1ME3 LINE L1 1741 2212 -4395 343 343 76 4 chr10 1930491 1930742 -138386023 + L1ME3 LINE L1 2238 2506 -4101 2190 285 90 32 chr10 1930757 1930794 -138385971 + L1ME3 LINE L1 3696 3729 -2697 1850 124 16 0 chr10 1930794 1931052 -138385713 + AluSq SINE Alu 34 295 -18 2190 285 90 32 chr10 1931052 1932777 -138383988 + L1ME3 LINE L1 3729 5560 -866 937 231 25 32 chr10 1932847 1933163 -138383602 + L1ME3 LINE L1 5573 5886 -558 25 51 0 0 chr10 1933324 1933363 -138383402 + AT_rich Low_complexity Low_complexity 1 39 0 6074 137 7 1 chr10 1933380 1934596 -138382169 - L1PB1 LINE L1 -1 6150 4925 790 266 113 11 chr10 1934597 1934950 -138381815 + L1ME3 LINE L1 6036 6424 -18 2477 70 0 0 chr10 1935180 1935481 -138381284 - AluY SINE Alu -10 301 1 28 48 0 0 chr10 1935695 1935737 -138381028 + AT_rich Low_complexity Low_complexity 1 42 0 494 31 16 0 chr10 1936596 1936660 -138380105 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 236 337 18 6 chr10 1936871 1937034 -138379731 - L1MCc LINE L1 -5098 1325 1161 2255 93 7 0 chr10 1937719 1938008 -138378757 - AluSx SINE Alu -21 291 1 562 240 0 0 chr10 1938764 1938893 -138377872 - L1PB4 LINE L1 -5 6151 6023 249 196 0 0 chr10 1939079 1939130 -138377635 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 39 22 0 0 chr10 1939931 1939977 -138376788 + AT_rich Low_complexity Low_complexity 1 46 0 226 188 62 10 chr10 1990348 1990444 -138326321 + (CCGCG)n Simple_repeat Simple_repeat 1 101 0 322 328 95 43 chr10 1990457 1990710 -138326055 + L1M2 LINE L1 537 802 -6047 2120 129 8 6 chr10 1990772 1991128 -138325637 + MER4D LTR ERV1 547 903 0 1176 134 18 80 chr10 1991232 1991456 -138325309 + AluJb SINE Alu 82 291 -21 486 75 0 0 chr10 1991457 1991524 -138325241 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 514 300 57 17 chr10 1991762 1992062 -138324703 - L1ME3A LINE L1 -301 5869 5558 368 320 22 67 chr10 1992077 1992130 -138324635 - L1ME3A LINE L1 -875 5271 5217 2048 115 7 3 chr10 1992130 1992416 -138324349 - AluSq SINE Alu -26 287 1 368 320 22 67 chr10 1992416 1992587 -138324178 - L1ME3A LINE L1 -929 5217 5057 336 48 0 0 chr10 1992688 1992730 -138324035 + (TG)n Simple_repeat Simple_repeat 2 43 0 251 319 39 16 chr10 1992765 1992947 -138323818 - L1ME3A LINE L1 -1199 4947 4762 21 0 0 0 chr10 1993099 1993120 -138323645 + AT_rich Low_complexity Low_complexity 1 21 0 523 86 0 0 chr10 1993167 1993237 -138323528 - U6 snRNA snRNA 0 107 38 281 314 88 10 chr10 1993239 1993443 -138323322 - L1ME3A LINE L1 -1369 4777 4558 409 276 113 33 chr10 1993447 1993748 -138323017 - L1ME3A LINE L1 -2458 3688 3364 993 259 82 22 chr10 1993794 1994600 -138322165 - L1M4 LINE L1 -1390 5254 4362 356 137 0 82 chr10 1994725 1994798 -138321967 - MSTD LTR MaLR -328 68 2 249 233 0 0 chr10 1994799 1994859 -138321906 - L1P LINE L1 -2351 3795 3736 32 43 0 0 chr10 1994894 1994940 -138321825 + AT_rich Low_complexity Low_complexity 1 46 0 804 276 46 39 chr10 1995037 1995287 -138321478 - L1M4 LINE L1 -4543 2103 1847 222 37 0 0 chr10 1995287 1995314 -138321451 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 804 276 46 39 chr10 1995314 1995497 -138321268 - L1M4 LINE L1 -4799 1847 1667 * 1769 272 25 53 chr10 1995494 1996251 -138320514 - L1M4 LINE L1 -5794 748 13 234 0 71 24 chr10 1996311 1996353 -138320412 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 475 316 67 98 chr10 1998034 1998275 -138318490 + HAL1 LINE L1 22 269 -2238 1721 177 17 7 chr10 1998275 1998574 -138318191 + AluJb SINE Alu 3 304 -8 475 316 67 98 chr10 1998574 1998675 -138318090 + HAL1 LINE L1 269 372 -2135 1183 246 33 87 chr10 1998675 1999225 -138317540 + MLT2B1 LTR ERVL 1 520 0 475 316 67 98 chr10 1999225 1999419 -138317346 + HAL1 LINE L1 372 542 -1965 300 339 62 14 chr10 1999499 1999791 -138316974 + HAL1 LINE L1 630 935 -1572 781 167 24 0 chr10 1999800 1999926 -138316839 + AluJb SINE Alu 136 264 -48 225 0 0 0 chr10 1999927 1999952 -138316813 + (GA)n Simple_repeat Simple_repeat 2 26 0 547 278 147 42 chr10 1999961 2000089 -138316676 + HAL1 LINE L1 965 1078 -1429 2438 53 7 7 chr10 2000089 2000391 -138316374 + AluY SINE Alu 1 302 -9 547 278 147 42 chr10 2000391 2000568 -138316197 + HAL1 LINE L1 1078 1302 -1205 667 295 56 36 chr10 2000590 2000980 -138315785 + HAL1 LINE L1 1483 1880 -627 382 270 46 66 chr10 2001416 2001612 -138315153 + L1MC4a LINE L1 5574 5765 -2043 433 182 34 7 chr10 2001618 2001766 -138314999 + (TAGA)n Simple_repeat Simple_repeat 4 155 0 1196 133 0 0 chr10 2001858 2002031 -138314734 - AluSg/x SINE Alu -3 309 137 324 181 0 56 chr10 2002032 2002104 -138314661 - AluJ/FLAM SINE Alu -234 68 1 306 252 102 24 chr10 2002105 2002232 -138314533 + L1MC4a LINE L1 5843 5979 -1829 4947 37 2 0 chr10 2002589 2003179 -138313586 - LTR10C LTR ERV1 0 591 1 324 0 0 0 chr10 2004108 2004144 -138312621 + (CATA)n Simple_repeat Simple_repeat 2 37 0 635 44 0 22 chr10 2006942 2007032 -138309733 + L1PA5 LINE L1 6064 6151 -3 727 99 99 0 chr10 2007033 2007154 -138309611 + L1PA16 LINE L1 6025 6157 -9 4539 228 54 65 chr10 2007210 2008154 -138308611 - L1MC3 LINE L1 -12 7773 6820 180 0 0 0 chr10 2008154 2008174 -138308591 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4539 228 54 65 chr10 2008174 2008313 -138308452 - L1MC3 LINE L1 -965 6820 6681 1323 161 150 29 chr10 2008313 2008587 -138308178 + AluSg1 SINE Alu 1 307 -2 4539 228 54 65 chr10 2008587 2009258 -138307507 - L1MC3 LINE L1 -1104 6681 6037 1764 176 0 23 chr10 2009780 2010087 -138306678 - AluJo SINE Alu -12 300 1 372 328 174 44 chr10 2010954 2011570 -138305195 - L1MEd LINE L1 -5218 901 206 247 329 84 16 chr10 2012048 2012358 -138304407 + L1MC4 LINE L1 7270 7600 -442 364 301 117 20 chr10 2012406 2012602 -138304163 + L1MC4 LINE L1 7687 7901 -141 189 0 0 0 chr10 2012604 2012625 -138304140 + (TA)n Simple_repeat Simple_repeat 1 21 0 209 225 28 14 chr10 2012662 2012733 -138304032 + GA-rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 2012807 2012842 -138303923 + AT_rich Low_complexity Low_complexity 1 35 0 608 326 80 32 chr10 2012985 2013379 -138303386 - L2 LINE L2 -1 3312 2890 935 84 0 53 chr10 2013379 2013569 -138303196 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 608 326 80 32 chr10 2013569 2013647 -138303118 - L2 LINE L2 -423 2890 2817 219 350 8 26 chr10 2013769 2013886 -138302879 - MER5B DNA MER1_type -60 118 4 330 234 215 24 chr10 2013913 2014118 -138302647 - L2 LINE L2 -534 2780 2537 1192 252 22 11 chr10 2014155 2014520 -138302245 + MLT1A2 LTR MaLR 6 374 0 337 288 123 6 chr10 2014527 2014690 -138302075 - L2 LINE L2 -803 2511 2330 509 96 0 48 chr10 2015976 2016008 -138300757 + MADE1 DNA Mariner 2 34 -46 2376 78 0 44 chr10 2016008 2016328 -138300437 - AluY SINE Alu -5 306 1 509 96 0 48 chr10 2016328 2016378 -138300387 + MADE1 DNA Mariner 34 80 0 225 354 50 43 chr10 2016524 2016685 -138300080 + MIR SINE MIR 76 237 -25 2134 113 0 0 chr10 2018142 2018424 -138298341 - AluSx SINE Alu -30 282 1 329 287 21 64 chr10 2020027 2020215 -138296550 + L2 LINE L2 3031 3210 -103 2624 77 34 0 chr10 2020933 2021284 -138295481 + THE1B LTR MaLR 1 363 -1 627 235 92 0 chr10 2023467 2023620 -138293145 + MER5A DNA MER1_type 4 170 -19 186 43 0 0 chr10 2024361 2024384 -138292381 + (TTC)n Simple_repeat Simple_repeat 2 24 0 905 200 0 6 chr10 2025043 2025218 -138291547 + AluJb SINE Alu 137 310 -2 22 35 0 0 chr10 2026835 2026864 -138289901 + AT_rich Low_complexity Low_complexity 1 29 0 4168 185 39 22 chr10 2026871 2027671 -138289094 - L1MA6 LINE L1 -1 6299 5483 2041 125 3 29 chr10 2027671 2027984 -138288781 - AluSx SINE Alu -7 305 1 4168 185 39 22 chr10 2027984 2028032 -138288733 - L1MA6 LINE L1 -817 5483 5437 2305 137 91 10 chr10 2028178 2028572 -138288193 - MSTB LTR MaLR 0 426 1 256 0 0 71 chr10 2031100 2031142 -138285623 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 2055 140 156 11 chr10 2031153 2031525 -138285240 + MSTA LTR MaLR 2 427 -1 1491 196 11 0 chr10 2031525 2031801 -138284964 - AluJb SINE Alu -33 279 1 22 0 0 0 chr10 2032729 2032751 -138284014 + AT_rich Low_complexity Low_complexity 1 22 0 924 252 133 44 chr10 2032808 2033400 -138283365 + MER114 LTR ERV 1 645 -3 1595 216 54 43 chr10 2033570 2034014 -138282751 - MSTB2 LTR MaLR -2 455 7 1223 229 107 33 chr10 2034369 2034705 -138282060 - MLT1A2 LTR MaLR -13 361 1 387 330 45 6 chr10 2035766 2035942 -138280823 + L2 LINE L2 2229 2411 -903 451 205 25 19 chr10 2036006 2036167 -138280598 + CT-rich Low_complexity Low_complexity 2 163 0 518 304 136 50 chr10 2036238 2036887 -138279878 + L2 LINE L2 2587 3285 -28 1152 196 31 13 chr10 2037388 2037612 -138279153 - MLT1A1 LTR MaLR -2 363 136 426 205 0 0 chr10 2037621 2037704 -138279061 - MLT1A1 LTR MaLR -171 194 112 1010 177 15 35 chr10 2037710 2037908 -138278857 - MLT1A1 LTR MaLR -171 194 1 1348 231 54 0 chr10 2037925 2038276 -138278489 - L1MC3 LINE L1 0 7785 7416 * 2134 245 52 60 chr10 2038273 2038996 -138277769 - L1MC3 LINE L1 -1098 6687 5971 1551 184 33 23 chr10 2038996 2039295 -138277470 - AluJb SINE Alu -10 302 1 2134 245 52 60 chr10 2039295 2039490 -138277275 - L1MC3 LINE L1 -1814 5971 5776 2795 178 20 79 chr10 2039752 2040400 -138276365 + LTR9 LTR ERV1 3 612 0 2037 119 1 48 chr10 2040658 2041192 -138275573 - MER4A LTR ERV1 0 664 1 3610 163 16 21 chr10 2042192 2042932 -138273833 + LTR1B LTR ERV1 1 826 0 30 45 0 0 chr10 2044413 2044457 -138272308 + AT_rich Low_complexity Low_complexity 1 44 0 1297 185 30 26 chr10 2046051 2046179 -138270586 + AluJo SINE Alu 1 127 -185 185 83 28 0 chr10 2046179 2046215 -138270550 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 1297 185 30 26 chr10 2046215 2046388 -138270377 + AluJo SINE Alu 127 303 -9 2119 190 33 13 chr10 2047003 2047397 -138269368 + MER57A LTR ERV1 1 402 -1 24 0 0 0 chr10 2048140 2048164 -138268601 + AT_rich Low_complexity Low_complexity 1 24 0 704 196 42 0 chr10 2048373 2048516 -138268249 - L1MB1 LINE L1 -1 6167 6019 855 161 0 60 chr10 2048570 2048769 -138267996 + L1MA4 LINE L1 6108 6294 -6 285 344 0 0 chr10 2048849 2048942 -138267823 - MIR SINE MIR -64 144 52 222 164 49 16 chr10 2049464 2049525 -138267240 + (CATAA)n Simple_repeat Simple_repeat 3 65 0 239 311 118 7 chr10 2049537 2049672 -138267093 - MIR SINE MIR -3 259 110 989 138 20 31 chr10 2049717 2049912 -138266853 - L1MA4 LINE L1 0 6300 6108 1955 53 0 0 chr10 2049922 2050150 -138266615 + L1PA5 LINE L1 5927 6154 0 728 201 49 0 chr10 2050198 2050342 -138266423 + L1MB1 LINE L1 6017 6167 -1 1223 207 48 42 chr10 2050344 2050721 -138266044 - MLT1D LTR MaLR -106 399 21 764 206 12 0 chr10 2050738 2050908 -138265857 + L1MC1 LINE L1 4727 4898 -1248 1392 301 52 7 chr10 2050910 2051504 -138265261 - L1M4 LINE L1 -1384 4762 4142 315 379 15 15 chr10 2052973 2053242 -138263523 - ERVL LTR ERVL -2260 3504 3236 212 0 36 0 chr10 2053508 2053536 -138263229 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 27 49 0 0 chr10 2055933 2055974 -138260791 + AT_rich Low_complexity Low_complexity 1 41 0 652 200 205 0 chr10 2056400 2056595 -138260170 - MER46A DNA MER2_type 0 236 2 914 153 10 89 chr10 2057060 2057263 -138259502 + AluJb SINE Alu 121 307 -5 5530 174 26 17 chr10 2057263 2057671 -138259094 + L1MC1 LINE L1 5207 5610 -723 2007 212 15 5 chr10 2057671 2058062 -138258703 + MSTD LTR MaLR 2 396 0 5530 174 26 17 chr10 2058062 2058762 -138258003 + L1MC1 LINE L1 5610 6328 -5 837 214 0 6 chr10 2059191 2059359 -138257406 - MER44D DNA MER2_type 0 705 539 1218 218 29 39 chr10 2059476 2059783 -138256982 + MLT2B3 LTR ERVL 251 554 0 * 2029 221 0 3 chr10 2059783 2060160 -138256605 - MER44D DNA MER2_type -166 439 9 800 363 148 9 chr10 2060411 2061249 -138255516 + L2 LINE L2 1716 2669 -645 683 250 51 21 chr10 2061269 2061534 -138255231 + MER58 DNA MER1_type 18 2384 -36 1910 139 30 3 chr10 2061538 2061833 -138254932 - AluSx SINE Alu -9 303 1 286 224 142 30 chr10 2061894 2062028 -138254737 + L2 LINE L2 2653 2801 -513 190 301 124 42 chr10 2062164 2062201 -138254564 + L2 LINE L2 2804 2837 -476 1077 229 47 28 chr10 2062201 2062564 -138254201 - MLT1A2 LTR MaLR -4 370 1 190 301 124 42 chr10 2062564 2062945 -138253820 + L2 LINE L2 2837 3298 -15 225 346 77 10 chr10 2064117 2064221 -138252544 + L2 LINE L2 3162 3272 0 722 188 33 12 chr10 2064395 2064565 -138252200 + MLT1A1 LTR MaLR 215 405 -4 21 0 0 0 chr10 2064919 2064940 -138251825 + AT_rich Low_complexity Low_complexity 1 21 0 1250 183 57 103 chr10 2065058 2065359 -138251406 + AluJb SINE Alu 2 288 -14 2090 128 3 7 chr10 2065944 2066242 -138250523 + AluSx SINE Alu 14 310 -2 22 0 0 0 chr10 2066951 2066973 -138249792 + AT_rich Low_complexity Low_complexity 1 22 0 252 168 69 46 chr10 2067931 2068104 -138248661 + (AAGTG)n Simple_repeat Simple_repeat 4 180 0 355 254 58 96 chr10 2068272 2068387 -138248378 + L1ME3 LINE L1 5865 5983 -187 2301 101 10 0 chr10 2068387 2068693 -138248072 + AluSx SINE Alu 1 309 -3 355 254 58 96 chr10 2068693 2068881 -138247884 + L1ME3 LINE L1 5983 6170 0 228 200 0 0 chr10 2070477 2070547 -138246218 + (TA)n Simple_repeat Simple_repeat 1 70 0 186 337 61 18 chr10 2071432 2071595 -138245170 + MIR SINE MIR 23 192 -70 208 219 78 16 chr10 2071636 2071700 -138245065 + L3 LINE CR1 206 273 -1304 1817 168 21 71 chr10 2071773 2072155 -138244610 + THE1B LTR MaLR 1 363 -1 2087 273 41 19 chr10 2072632 2073361 -138243404 - L1ME1 LINE L1 -4 6162 5418 216 336 14 41 chr10 2073720 2073780 -138242985 - MIR SINE MIR -10 252 192 2172 125 7 0 chr10 2073780 2074076 -138242689 - AluSx SINE Alu -14 298 1 216 336 14 41 chr10 2074076 2074161 -138242604 - MIR SINE MIR -70 192 111 22 0 0 0 chr10 2074209 2074231 -138242534 + AT_rich Low_complexity Low_complexity 1 22 0 1294 222 34 54 chr10 2075432 2075910 -138240855 - L1M4 LINE L1 -2927 3219 2752 3312 247 84 38 chr10 2075912 2077802 -138238963 + L1MC/D LINE L1 3729 5716 -766 1242 146 6 1 chr10 2077903 2080204 -138236561 - ALR/Alpha Satellite centromeric 0 2313 1 1217 159 10 1 chr10 2080304 2083543 -138233222 - ALR/Alpha Satellite centromeric 0 3268 1 1469 201 99 3 chr10 2084544 2084877 -138231888 + MLT1A1 LTR MaLR 1 365 0 233 206 0 15 chr10 2085473 2085541 -138231224 + CT-rich Low_complexity Low_complexity 5 71 0 493 355 37 25 chr10 2086077 2086401 -138230364 + L1MEc LINE L1 45 372 -6024 368 284 133 33 chr10 2086745 2086956 -138229809 + L1MEc LINE L1 786 1017 -5379 1931 286 119 53 chr10 2086982 2088160 -138228605 + L1MCc LINE L1 17 1307 -5116 1988 151 14 0 chr10 2088160 2088451 -138228314 - AluSx SINE Alu -17 295 1 1931 286 119 53 chr10 2088451 2088697 -138228068 + L1MCc LINE L1 1307 1535 -4888 303 336 7 14 chr10 2088722 2088868 -138227897 + L1MCc LINE L1 1552 1696 -5245 922 256 49 47 chr10 2089103 2089536 -138227229 + L1M4 LINE L1 4597 5033 -1113 2815 22 0 10 chr10 2089536 2089850 -138226915 + AluY SINE Alu 1 311 0 922 256 49 47 chr10 2089850 2089927 -138226838 + L1M4 LINE L1 5033 5108 -1038 2441 147 18 35 chr10 2090199 2090581 -138226184 + MSTA LTR MaLR 1 388 -40 2269 104 3 0 chr10 2090581 2090870 -138225895 + AluSp SINE Alu 1 290 -23 306 0 0 0 chr10 2090873 2090907 -138225858 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2441 147 18 35 chr10 2090907 2090955 -138225810 + MSTA LTR MaLR 390 428 0 228 283 0 0 chr10 2091232 2091292 -138225473 + L2 LINE L2 3254 3313 0 363 167 0 0 chr10 2092223 2092283 -138224482 - L1MA5 LINE L1 -220 6080 6021 1215 118 10 20 chr10 2092301 2092505 -138224260 + L1MA5 LINE L1 6095 6296 -4 208 364 39 34 chr10 2093167 2093373 -138223392 + L3 LINE CR1 249 455 -1122 27 73 0 0 chr10 2093897 2093952 -138222813 + AT_rich Low_complexity Low_complexity 1 55 0 1222 229 85 15 chr10 2094752 2095154 -138221611 + MER31B LTR ERV1 1 430 -36 344 233 282 6 chr10 2096285 2096448 -138220317 - L1MC4 LINE L1 -1115 6927 6720 366 231 8 34 chr10 2098053 2098170 -138218595 + MIR SINE MIR 12 125 -137 347 286 44 20 chr10 2098324 2098527 -138218238 - L2 LINE L2 -1391 1923 1716 225 194 11 43 chr10 2098537 2098630 -138218135 + (TG)n Simple_repeat Simple_repeat 2 91 0 4998 213 37 25 chr10 2100833 2102398 -138214367 - L1MC1 LINE L1 -18 6298 4720 238 248 0 59 chr10 2102397 2102498 -138214267 - L1MC1 LINE L1 -1817 4312 4218 * 586 122 0 0 chr10 2102738 2102820 -138213945 + AluSg/x SINE Alu 212 293 -17 1439 234 30 55 chr10 2103106 2103581 -138213184 + MLT1C LTR MaLR 5 467 0 183 315 36 27 chr10 2103999 2104110 -138212655 - MIR3 SINE MIR -28 180 69 293 250 40 0 chr10 2104499 2104575 -138212190 + MER45A DNA AcHobo 99 177 -1 534 290 106 65 chr10 2106581 2106734 -138210031 - L1MC1 LINE L1 -4929 1381 1236 367 19 19 19 chr10 2106734 2106787 -138209978 + (CA)n Simple_repeat Simple_repeat 2 54 0 534 290 106 65 chr10 2106787 2107441 -138209324 - L1MC1 LINE L1 -5074 1236 520 22 56 0 0 chr10 2107846 2107882 -138208883 + AT_rich Low_complexity Low_complexity 1 36 0 334 207 49 12 chr10 2108024 2108106 -138208659 + LTR16A LTR ERVL 53 137 -313 250 269 34 42 chr10 2108210 2108329 -138208436 + LTR16A LTR ERVL 303 420 -30 1892 168 0 13 chr10 2108734 2109032 -138207733 + AluSx SINE Alu 1 294 -18 22 80 0 0 chr10 2109812 2109862 -138206903 + AT_rich Low_complexity Low_complexity 1 50 0 1733 71 0 0 chr10 2109942 2110153 -138206612 - AluY SINE Alu -18 293 83 405 174 23 23 chr10 2110154 2110240 -138206525 + MLT1A2 LTR MaLR 127 212 -162 2054 118 0 57 chr10 2110253 2110567 -138206198 + AluSx SINE Alu 3 298 -14 376 341 32 23 chr10 2110631 2110848 -138205917 + MIR SINE MIR 44 262 0 565 222 98 31 chr10 2111350 2111544 -138205221 + MER3 DNA MER1_type 3 209 0 1762 122 34 27 chr10 2111857 2112152 -138204613 - AluSx SINE Alu -15 297 1 25 0 0 0 chr10 2113955 2113980 -138202785 + AT_rich Low_complexity Low_complexity 1 25 0 850 194 61 116 chr10 2114341 2114737 -138202028 - MLT1A2 LTR MaLR 0 374 1 687 299 119 13 chr10 2115411 2115799 -138200966 + MLT1G LTR MaLR 68 496 -94 914 300 35 25 chr10 2116408 2116811 -138199954 - MLT1I LTR MaLR -2 407 1 23 0 0 0 chr10 2117139 2117162 -138199603 + AT_rich Low_complexity Low_complexity 1 23 0 220 203 0 86 chr10 2118641 2118838 -138197927 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 295 294 0 0 chr10 2119129 2119214 -138197551 - MIR SINE MIR -67 141 57 609 142 20 81 chr10 2120489 2120637 -138196128 - L1M LINE L1 -775 5393 5255 251 154 0 19 chr10 2121083 2121135 -138195630 + CT-rich Low_complexity Low_complexity 1 51 0 452 271 17 0 chr10 2121475 2121593 -138195172 - L2 LINE L2 -10 3262 3143 1507 180 58 6 chr10 2121854 2121999 -138194766 - L1ME LINE L1 -712 5454 5318 276 30 0 0 chr10 2121999 2122032 -138194733 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1507 180 58 6 chr10 2122032 2122288 -138194477 - L1ME LINE L1 -848 5318 5043 2934 185 100 14 chr10 2122294 2122595 -138194170 + L1MB1 LINE L1 5463 5737 -431 438 20 0 0 chr10 2122595 2122646 -138194119 + (TG)n Simple_repeat Simple_repeat 1 51 0 2934 185 100 14 chr10 2122646 2122993 -138193772 + L1MB1 LINE L1 5737 6167 -1 297 63 16 63 chr10 2123034 2123097 -138193668 + (GGA)n Simple_repeat Simple_repeat 3 62 0 300 194 0 16 chr10 2123835 2123897 -138192868 - MER31B LTR ERV1 0 466 406 2006 264 31 16 chr10 2124538 2125245 -138191520 - L1ME LINE L1 -2227 3919 3202 824 214 5 20 chr10 2125246 2125442 -138191323 - AluJo SINE Alu -1 311 119 2648 260 65 7 chr10 2125442 2126400 -138190365 - L1ME LINE L1 -2961 3185 2173 198 356 79 28 chr10 2127625 2127841 -138188924 + MIR SINE MIR 34 260 -2 396 0 0 0 chr10 2128482 2128526 -138188239 + (CA)n Simple_repeat Simple_repeat 2 45 0 237 163 0 0 chr10 2128526 2128575 -138188190 + (TA)n Simple_repeat Simple_repeat 2 50 0 2199 125 29 35 chr10 2128577 2128954 -138187811 + THE1C LTR MaLR 1 375 0 902 199 49 135 chr10 2130181 2130588 -138186177 + MLT1B LTR MaLR 1 372 -18 411 238 67 50 chr10 2131408 2131648 -138185117 - L1MC5 LINE L1 -102 7859 7616 35 0 0 0 chr10 2131848 2131883 -138184882 + AT_rich Low_complexity Low_complexity 1 35 0 25 95 0 0 chr10 2131910 2131984 -138184781 + AT_rich Low_complexity Low_complexity 1 74 0 1481 176 37 11 chr10 2133336 2133609 -138183156 - AluJo SINE Alu -32 280 1 33 0 0 0 chr10 2134845 2134878 -138181887 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 2137732 2137760 -138179005 + AT_rich Low_complexity Low_complexity 1 28 0 225 230 0 0 chr10 2139116 2139242 -138177523 + (TG)n Simple_repeat Simple_repeat 2 127 0 437 218 6 0 chr10 2139285 2139455 -138177310 + (TG)n Simple_repeat Simple_repeat 2 172 0 22 0 0 0 chr10 2140234 2140256 -138176509 + AT_rich Low_complexity Low_complexity 1 22 0 297 330 26 0 chr10 2140403 2140518 -138176247 + MIR SINE MIR 30 147 -61 2194 85 0 30 chr10 2142740 2143045 -138173720 + AluSc SINE Alu 1 296 -13 458 262 25 98 chr10 2143164 2143408 -138173357 - L1MC3 LINE L1 -7 7778 7553 1404 201 28 14 chr10 2143834 2144123 -138172642 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr10 2144145 2144167 -138172598 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr10 2144189 2144225 -138172540 + GA-rich Low_complexity Low_complexity 2 37 0 1962 128 6 35 chr10 2144342 2144654 -138172111 - AluSx SINE Alu -9 303 1 198 269 13 51 chr10 2145387 2145465 -138171300 + MER5A DNA MER1_type 30 104 -85 2187 140 48 28 chr10 2146678 2147035 -138169730 + THE1B LTR MaLR 1 364 0 308 281 73 83 chr10 2147726 2147905 -138168860 + L1M4 LINE L1 3784 3963 -2183 2120 133 0 3 chr10 2147905 2148213 -138168552 + AluSx SINE Alu 1 307 -5 308 281 73 83 chr10 2148213 2148417 -138168348 + L1M4 LINE L1 3963 4163 -1983 2010 274 31 15 chr10 2149063 2149775 -138166990 - L1M4 LINE L1 -1017 5129 4407 188 234 0 16 chr10 2149775 2149839 -138166926 + CT-rich Low_complexity Low_complexity 1 63 0 921 189 98 20 chr10 2149855 2149937 -138166828 - L1MB3 LINE L1 -1 6182 6108 471 96 96 0 chr10 2149937 2150010 -138166755 + MADE1 DNA Mariner 1 80 0 921 189 98 20 chr10 2150010 2150181 -138166584 - L1MB3 LINE L1 -75 6108 5909 803 148 19 39 chr10 2150811 2150966 -138165799 - L1MA4 LINE L1 -16 6284 6133 534 185 99 0 chr10 2151298 2151449 -138165316 - L1MA4 LINE L1 -169 6131 5966 25 0 0 0 chr10 2153680 2153705 -138163060 + AT_rich Low_complexity Low_complexity 1 25 0 2562 58 3 0 chr10 2153797 2154106 -138162659 + AluY SINE Alu 1 310 -1 27 0 0 0 chr10 2154204 2154231 -138162534 + AT_rich Low_complexity Low_complexity 1 27 0 869 214 6 0 chr10 2154231 2154390 -138162375 - FRAM SINE Alu -19 157 1 1835 116 0 58 chr10 2157073 2157365 -138159400 + AluSx SINE Alu 32 306 -6 1672 173 13 86 chr10 2161086 2161341 -138155424 - MER39 LTR ERV1 -3 704 487 1578 119 13 0 chr10 2161341 2161567 -138155198 + AluSx SINE Alu 58 286 -26 1672 173 13 86 chr10 2161567 2161705 -138155060 - MER39 LTR ERV1 -220 487 340 926 266 43 14 chr10 2161785 2162063 -138154702 + MLT1F LTR MaLR 1 286 -256 277 273 23 68 chr10 2163223 2163399 -138153366 + (CAGCC)n Simple_repeat Simple_repeat 5 172 0 445 205 17 0 chr10 2164292 2164409 -138152356 + (TATG)n Simple_repeat Simple_repeat 2 120 0 238 194 32 16 chr10 2164935 2164997 -138151768 + GA-rich Low_complexity Low_complexity 2 64 0 1462 170 11 11 chr10 2166572 2166866 -138149899 + AluJo SINE Alu 12 305 0 251 333 52 26 chr10 2167151 2167304 -138149461 - MIR3 SINE MIR -33 175 19 1046 198 0 0 chr10 2167496 2167678 -138149087 - Tigger5 DNA MER2_type 0 2323 2142 187 333 17 0 chr10 2168488 2168548 -138148217 + L2 LINE L2 3200 3260 -12 231 61 0 0 chr10 2169414 2169447 -138147318 + (TG)n Simple_repeat Simple_repeat 2 34 0 1219 206 59 45 chr10 2170006 2170590 -138146175 + L1MCa LINE L1 1769 2452 -3974 782 237 59 0 chr10 2170601 2170787 -138145978 + MER74A LTR ERVL 43 239 -319 23 33 0 0 chr10 2171413 2171443 -138145322 + AT_rich Low_complexity Low_complexity 1 30 0 1817 113 0 12 chr10 2171931 2172188 -138144577 - AluSg SINE Alu -17 293 40 1106 65 7 0 chr10 2172190 2172328 -138144437 - AluSq/x SINE Alu -174 139 1 37 23 0 0 chr10 2172595 2172639 -138144126 + AT_rich Low_complexity Low_complexity 1 44 0 297 308 0 0 chr10 2173083 2173174 -138143591 + (TG)n Simple_repeat Simple_repeat 1 91 0 428 316 7 0 chr10 2173188 2173343 -138143422 + (TG)n Simple_repeat Simple_repeat 2 157 0 1578 99 130 16 chr10 2173430 2173711 -138143054 - AluSg1 SINE Alu 0 310 1 3332 110 18 18 chr10 2173956 2174111 -138142654 + MER75 DNA T2_type 3 157 -357 2128 99 11 0 chr10 2174111 2174416 -138142349 - AluSp SINE Alu 0 308 1 3332 110 18 18 chr10 2174416 2174757 -138142008 + MER75 DNA T2_type 156 500 -14 333 339 17 39 chr10 2174968 2175148 -138141617 - MER5B DNA MER1_type 0 178 3 3012 126 28 16 chr10 2176805 2177312 -138139453 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr10 2177607 2177627 -138139138 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 384 239 68 106 chr10 2178704 2179026 -138137739 + MLT1H LTR MaLR 230 539 -10 25 31 0 0 chr10 2179552 2179584 -138137181 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr10 2180053 2180085 -138136680 + AT_rich Low_complexity Low_complexity 1 32 0 1779 119 0 11 chr10 2180093 2180353 -138136412 + AluSc SINE Alu 1 257 -52 1690 132 60 0 chr10 2180970 2181289 -138135476 - L1MA5A LINE L1 0 6297 5960 654 235 130 72 chr10 2182914 2183259 -138133506 + MLT1D LTR MaLR 1 365 -140 2088 108 85 18 chr10 2183591 2183932 -138132833 + THE1B LTR MaLR 1 364 0 552 185 0 0 chr10 2186392 2186484 -138130281 - AluJ/FLAM SINE Alu -220 92 1 2004 101 42 14 chr10 2187250 2187538 -138129227 + AluSx SINE Alu 1 296 -16 2309 206 37 85 chr10 2188498 2188985 -138127780 - L1MC2 LINE L1 -396 5948 5497 2051 138 10 0 chr10 2188985 2189275 -138127490 - AluSg SINE Alu -17 293 1 2309 206 37 85 chr10 2189275 2189648 -138127117 - L1MC2 LINE L1 -847 5497 5107 2273 71 0 0 chr10 2190052 2190373 -138126392 + AluY SINE Alu 1 321 0 2132 104 0 4 chr10 2190769 2191049 -138125716 - AluSq SINE Alu -34 279 1 203 363 29 0 chr10 2191163 2191265 -138125500 - MIR SINE MIR -58 204 100 1601 233 25 0 chr10 2191302 2191709 -138125056 - MER47B DNA MER2_type 0 418 2 274 243 21 95 chr10 2192240 2192483 -138124282 + L1MC5 LINE L1 7549 7773 -188 191 122 0 49 chr10 2192496 2192537 -138124228 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 201 365 0 32 chr10 2193133 2193289 -138123476 + (CAATG)n Simple_repeat Simple_repeat 3 153 0 306 234 24 24 chr10 2193551 2193843 -138122922 + GA-rich Low_complexity Low_complexity 1 292 0 180 0 0 0 chr10 2194739 2194759 -138122006 + (TA)n Simple_repeat Simple_repeat 2 21 0 2191 115 0 0 chr10 2194765 2195060 -138121705 - AluSq SINE Alu -18 295 1 908 233 125 15 chr10 2195070 2195413 -138121352 - L1MC3 LINE L1 -1 7784 7404 3279 245 108 26 chr10 2195858 2197281 -138119484 - L1MC3 LINE L1 -335 7450 5919 202 314 115 32 chr10 2197542 2197698 -138119067 + L2 LINE L2 2614 2782 -532 754 194 22 0 chr10 2197717 2197856 -138118909 - FLAM_C SINE Alu 0 143 2 3966 24 0 0 chr10 2197865 2198326 -138118439 - L1PA3 LINE L1 0 6155 5695 32 26 0 0 chr10 2198388 2198427 -138118338 + AT_rich Low_complexity Low_complexity 1 39 0 296 195 23 35 chr10 2199848 2199935 -138116830 - MER53 DNA DNA -1 188 103 512 175 0 0 chr10 2200424 2200521 -138116244 - L1MA5A LINE L1 -10 6287 6191 753 239 157 11 chr10 2200970 2201250 -138115515 + MER33 DNA MER1_type 1 321 -3 1135 184 4 12 chr10 2201600 2201845 -138114920 - L1MA6 LINE L1 -1 6299 6057 295 109 0 0 chr10 2201870 2201916 -138114849 + L1M2 LINE L1 5444 5489 -811 1943 106 7 3 chr10 2201922 2202253 -138114512 + AluSx SINE Alu 1 332 0 529 329 112 47 chr10 2202744 2203578 -138113187 + L1M4 LINE L1 2225 3112 -3034 1779 106 13 0 chr10 2203757 2203992 -138112773 + AluSx SINE Alu 64 301 -11 424 287 103 0 chr10 2204278 2204414 -138112351 + MIR SINE MIR 4 153 -109 323 322 44 16 chr10 2206361 2206544 -138110221 - MER46C DNA MER2_type -46 292 105 298 176 22 33 chr10 2206820 2206911 -138109854 + (TA)n Simple_repeat Simple_repeat 1 90 0 28 61 0 0 chr10 2206946 2206995 -138109770 + AT_rich Low_complexity Low_complexity 1 49 0 302 136 64 16 chr10 2207007 2207132 -138109633 + (TA)n Simple_repeat Simple_repeat 1 131 0 297 133 20 41 chr10 2207171 2207269 -138109496 + (TA)n Simple_repeat Simple_repeat 1 96 0 395 196 68 7 chr10 2207283 2207551 -138109214 + (TA)n Simple_repeat Simple_repeat 1 284 0 24 32 0 0 chr10 2207677 2207708 -138109057 + AT_rich Low_complexity Low_complexity 1 31 0 243 61 0 0 chr10 2209452 2209485 -138107280 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1428 250 57 38 chr10 2209622 2210758 -138106007 + L1MCb LINE L1 475 1638 -4885 1815 142 40 7 chr10 2210758 2211054 -138105711 + AluSx SINE Alu 1 306 -6 1428 250 57 38 chr10 2211054 2211090 -138105675 + L1MCb LINE L1 1638 1672 -4851 1246 222 104 21 chr10 2211088 2211567 -138105198 + L1M4 LINE L1 5312 5828 -346 * 2298 222 12 42 chr10 2211574 2212219 -138104546 - L1 LINE L1 -3311 2835 2210 219 338 95 0 chr10 2212586 2212660 -138104105 - L2 LINE L2 -38 3234 3154 258 254 0 0 chr10 2213582 2213649 -138103116 + (TG)n Simple_repeat Simple_repeat 2 68 0 1638 177 0 38 chr10 2213886 2214203 -138102562 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr10 2214269 2214299 -138102466 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 2215267 2215297 -138101468 + AT_rich Low_complexity Low_complexity 1 30 0 7852 13 7 0 chr10 2217503 2218524 -138098241 - L1PA2 LINE L1 0 6155 5133 5001 191 32 20 chr10 2221197 2222776 -138093989 + L1MC1 LINE L1 4732 6331 -2 315 216 0 0 chr10 2222793 2222867 -138093898 + AluJ/FRAM SINE Alu 228 301 -1 27 0 0 0 chr10 2223640 2223667 -138093098 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr10 2223706 2223735 -138093030 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr10 2224003 2224041 -138092724 + AT_rich Low_complexity Low_complexity 1 38 0 305 307 135 5 chr10 2224868 2225083 -138091682 + MLT1J1 LTR MaLR 202 444 -2 290 314 44 7 chr10 2225548 2225685 -138091080 + MLT1J2 LTR MaLR 47 188 -262 26 30 0 0 chr10 2225899 2225932 -138090833 + AT_rich Low_complexity Low_complexity 1 33 0 1947 104 11 31 chr10 2226232 2226519 -138090246 - AluSg SINE Alu -3 307 27 280 179 0 0 chr10 2226608 2226664 -138090101 - MER4-int LTR ERV1 -5431 1167 1112 212 196 62 21 chr10 2226667 2226764 -138090001 + (CATG)n Simple_repeat Simple_repeat 2 102 0 * 354 297 0 0 chr10 2226744 2226889 -138089876 + (CA)n Simple_repeat Simple_repeat 1 145 0 398 286 183 43 chr10 2228230 2228765 -138088000 + L2 LINE L2 2366 2975 -339 189 333 10 62 chr10 2228983 2229079 -138087686 + L2 LINE L2 3142 3232 -40 898 246 36 70 chr10 2229829 2230186 -138086579 - MLT1A2 LTR MaLR 0 374 30 21 0 0 0 chr10 2230404 2230425 -138086340 + AT_rich Low_complexity Low_complexity 1 21 0 361 168 77 0 chr10 2230566 2230721 -138086044 + (TA)n Simple_repeat Simple_repeat 1 167 0 299 333 33 39 chr10 2231278 2231614 -138085151 + L1ME4a LINE L1 5540 5873 -248 2164 144 44 47 chr10 2231946 2232329 -138084436 + MER83 LTR ERV1 1 382 -66 26 0 0 0 chr10 2232329 2232355 -138084410 + AT_rich Low_complexity Low_complexity 1 26 0 1207 211 20 56 chr10 2232539 2232894 -138083871 - MLT1A1 LTR MaLR 0 365 24 752 208 119 36 chr10 2233860 2234054 -138082711 - L1MDb LINE L1 -5342 1201 972 2335 113 52 19 chr10 2234054 2234417 -138082348 + THE1C LTR MaLR 1 375 0 752 208 119 36 chr10 2234417 2234525 -138082240 - L1MDb LINE L1 -5571 972 874 327 286 112 29 chr10 2234733 2234939 -138081826 - L1MDb LINE L1 -6146 394 172 1114 58 0 0 chr10 2234979 2235116 -138081649 + AluY SINE Alu 172 308 -3 26 30 0 0 chr10 2235833 2235866 -138080899 + AT_rich Low_complexity Low_complexity 1 33 0 256 314 8 40 chr10 2235919 2236043 -138080722 - L1MEc LINE L1 -4646 1750 1631 2403 74 3 7 chr10 2237147 2237457 -138079308 - AluY SINE Alu -2 309 1 1919 136 0 3 chr10 2238469 2238756 -138078009 + AluSx SINE Alu 23 308 -4 21 57 0 0 chr10 2238829 2238864 -138077901 + AT_rich Low_complexity Low_complexity 1 35 0 663 223 54 45 chr10 2240021 2240263 -138076502 + LTR40a LTR ERVL 212 512 -7 592 255 74 10 chr10 2241485 2241730 -138075035 - MIR SINE MIR 0 262 3 21 0 0 0 chr10 2242381 2242402 -138074363 + AT_rich Low_complexity Low_complexity 1 21 0 2172 114 0 3 chr10 2244080 2244369 -138072396 - AluSx SINE Alu -24 288 1 207 257 239 0 chr10 2244427 2244536 -138072229 - MIR SINE MIR -46 216 82 203 367 73 0 chr10 2244859 2244968 -138071797 - MIR SINE MIR -111 151 35 22 109 0 0 chr10 2245680 2245772 -138070993 + AT_rich Low_complexity Low_complexity 1 92 0 715 261 30 0 chr10 2245927 2246126 -138070639 - L1MC3 LINE L1 -21 7764 7560 2101 184 49 11 chr10 2246137 2246588 -138070177 + MER50 LTR ERV1 12 479 -255 1649 113 8 0 chr10 2246723 2246961 -138069804 + MER50 LTR ERV1 463 702 -32 2249 243 57 16 chr10 2246971 2247658 -138069107 - L1MC3 LINE L1 -221 7564 6850 317 222 10 0 chr10 2247707 2247806 -138068959 + (TG)n Simple_repeat Simple_repeat 1 100 0 1680 231 110 27 chr10 2247806 2248369 -138068396 - L1MC3 LINE L1 -928 6857 6248 3570 113 21 25 chr10 2249146 2249704 -138067061 + MER4B LTR ERV1 1 556 -54 286 77 0 0 chr10 2249700 2249739 -138067026 + Alu SINE Alu 13 51 -249 * 486 211 0 46 chr10 2249753 2249862 -138066903 - LTR62 LTR ERVK -610 109 6 1434 211 97 50 chr10 2250530 2250994 -138065771 - MER66B LTR ERV1 0 486 1 1512 130 65 0 chr10 2251488 2251704 -138065061 - MER30 DNA MER1_type 0 230 1 23 33 0 0 chr10 2253150 2253180 -138063585 + AT_rich Low_complexity Low_complexity 1 30 0 236 321 131 0 chr10 2253188 2253325 -138063440 + L1M4 LINE L1 3731 3885 -2261 252 0 0 0 chr10 2253680 2253708 -138063057 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 433 244 0 0 chr10 2253986 2254072 -138062693 - U6 snRNA snRNA -19 88 3 606 239 100 13 chr10 2254074 2254304 -138062461 + MLT2D LTR ERVL 100 349 -65 575 138 54 6 chr10 2254318 2254485 -138062280 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 376 163 72 0 chr10 2254552 2254718 -138062047 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 509 123 71 0 chr10 2254762 2254917 -138061848 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 633 121 55 0 chr10 2254987 2255152 -138061613 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2125 135 0 0 chr10 2256011 2256322 -138060443 + AluSx SINE Alu 1 311 -1 1298 247 34 29 chr10 2256359 2256739 -138060026 - MLT1B LTR MaLR -8 382 1 362 285 125 0 chr10 2257803 2257947 -138058818 + LTR16C LTR ERVL 88 249 -242 323 259 74 53 chr10 2257952 2258141 -138058624 + L1ME3A LINE L1 5965 6157 -13 21 0 0 0 chr10 2258142 2258163 -138058602 + AT_rich Low_complexity Low_complexity 1 21 0 2804 115 0 0 chr10 2259079 2259443 -138057322 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr10 2259676 2259701 -138057064 + AT_rich Low_complexity Low_complexity 1 25 0 2390 79 0 3 chr10 2261227 2261532 -138055233 - AluY SINE Alu -7 304 1 226 163 0 20 chr10 2261696 2261745 -138055020 + A-rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr10 2262452 2262474 -138054291 + AT_rich Low_complexity Low_complexity 1 22 0 2319 136 101 20 chr10 2262689 2263085 -138053680 + MSTA LTR MaLR 1 428 0 541 284 84 37 chr10 2263526 2263847 -138052918 - MLT1I LTR MaLR -4 405 70 232 171 57 0 chr10 2263919 2263989 -138052776 + C-rich Low_complexity Low_complexity 3 76 0 248 276 66 83 chr10 2265606 2265749 -138051016 - HAL1b LINE L1 -2 1346 1202 273 75 0 0 chr10 2265749 2265789 -138050976 + (TG)n Simple_repeat Simple_repeat 1 40 0 248 276 66 83 chr10 2265789 2266055 -138050710 - HAL1b LINE L1 -146 1202 944 1541 199 13 13 chr10 2266059 2266370 -138050395 + AluJb SINE Alu 1 311 -1 492 300 79 44 chr10 2266587 2266994 -138049771 - HAL1b LINE L1 -513 835 415 1394 45 0 6 chr10 2267094 2267273 -138049492 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1593 190 16 57 chr10 2267273 2267641 -138049124 - MLT1B LTR MaLR -37 353 1 204 236 34 34 chr10 2268153 2268242 -138048523 + T-rich Low_complexity Low_complexity 2 90 0 22 35 0 0 chr10 2268782 2268811 -138047954 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr10 2269585 2269613 -138047152 + (CA)n Simple_repeat Simple_repeat 2 29 0 297 268 65 82 chr10 2269846 2270137 -138046628 - MLT1H LTR MaLR -214 335 50 2000 194 26 11 chr10 2272031 2272413 -138044352 + MLT1B LTR MaLR 3 390 0 813 136 0 15 chr10 2272556 2272688 -138044077 + AluJo SINE Alu 5 134 -178 692 220 0 0 chr10 2276819 2276960 -138039805 + FLAM_C SINE Alu 3 143 0 1624 40 0 0 chr10 2277042 2277240 -138039525 + L1PA2 LINE L1 5958 6155 0 279 0 0 0 chr10 2277491 2277522 -138039243 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr10 2277873 2277894 -138038871 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 1231 118 0 0 chr10 2278515 2278684 -138038081 + AluSg/x SINE Alu 131 299 -13 307 341 142 37 chr10 2279006 2279329 -138037436 + HAL1 LINE L1 1414 1770 -737 2421 81 0 3 chr10 2280014 2280322 -138036443 + AluY SINE Alu 1 307 -4 1479 291 97 15 chr10 2280563 2281411 -138035354 + L1M4b LINE L1 44 960 -5899 419 250 23 0 chr10 2281405 2281537 -138035228 - L1M4 LINE L1 -4853 1689 1555 * 228 185 0 19 chr10 2281557 2281611 -138035154 + (TA)n Simple_repeat Simple_repeat 1 53 0 268 74 0 37 chr10 2281898 2281915 -138034850 + (TA)n Simple_repeat Simple_repeat 1 17 -35 189 0 0 0 chr10 2281915 2281936 -138034829 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 74 0 37 chr10 2281936 2281972 -138034793 + (TA)n Simple_repeat Simple_repeat 17 52 0 365 202 0 64 chr10 2282010 2282104 -138034661 + L1MC4 LINE L1 6616 6703 -1339 243 0 0 0 chr10 2282112 2282139 -138034626 + (GA)n Simple_repeat Simple_repeat 2 28 0 240 100 0 0 chr10 2282196 2282236 -138034529 + (TA)n Simple_repeat Simple_repeat 1 40 0 256 307 20 0 chr10 2282468 2282569 -138034196 + L1ME LINE L1 5735 5837 -333 508 103 0 13 chr10 2282617 2282695 -138034070 + MADE1 DNA Mariner 4 80 0 378 0 0 0 chr10 2282696 2282738 -138034027 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 314 239 9 0 chr10 2283372 2283481 -138033284 + (TA)n Simple_repeat Simple_repeat 1 110 0 400 333 16 58 chr10 2283546 2283829 -138032936 - L1MEd LINE L1 -4992 1078 784 305 277 27 54 chr10 2284271 2284383 -138032382 - L1MEd LINE L1 -5887 183 75 2487 81 7 0 chr10 2284961 2285269 -138031496 + AluY SINE Alu 2 311 0 302 313 21 0 chr10 2286599 2286695 -138030070 + L1ME LINE L1 5735 5832 -338 313 261 0 43 chr10 2286724 2286912 -138029853 + (TA)n Simple_repeat Simple_repeat 1 180 0 267 156 0 0 chr10 2286927 2286972 -138029793 - MSTA LTR MaLR -383 45 1 240 318 0 0 chr10 2287244 2287307 -138029458 + L2 LINE L2 2729 2791 -523 1399 165 81 0 chr10 2288194 2288430 -138028335 + AluJb SINE Alu 40 294 -18 2785 19 0 6 chr10 2288565 2288876 -138027889 + AluY SINE Alu 1 309 -2 1126 268 79 63 chr10 2290191 2290854 -138025911 - L1ME1 LINE L1 -3 6232 5524 2022 95 15 0 chr10 2290854 2291127 -138025638 - AluSp SINE Alu -35 278 2 1126 268 79 63 chr10 2291127 2291611 -138025154 - L1ME1 LINE L1 -711 5524 5049 979 316 57 35 chr10 2291642 2292229 -138024536 - L1ME1 LINE L1 -5415 981 365 1432 157 70 76 chr10 2292229 2292573 -138024192 + MER61A LTR ERV1 1 342 -1 979 316 57 35 chr10 2292573 2292903 -138023862 - L1ME1 LINE L1 -6031 365 44 30 0 0 0 chr10 2293451 2293481 -138023284 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr10 2293508 2293544 -138023221 + (A)n Simple_repeat Simple_repeat 1 36 0 1227 179 10 5 chr10 2293813 2294020 -138022745 + AluJb SINE Alu 59 266 -46 186 209 0 0 chr10 2295143 2295186 -138021579 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 500 278 67 0 chr10 2295819 2296013 -138020752 - MER20 DNA MER1_type -7 212 6 447 19 0 0 chr10 2296355 2296407 -138020358 + (CA)n Simple_repeat Simple_repeat 2 53 0 446 170 0 10 chr10 2297609 2297709 -138019056 + (CA)n Simple_repeat Simple_repeat 2 100 0 290 243 100 67 chr10 2297914 2298086 -138018679 + L1MA9 LINE L1 6058 6240 -72 204 40 0 0 chr10 2298086 2298111 -138018654 + (TA)n Simple_repeat Simple_repeat 2 26 0 290 243 100 67 chr10 2298111 2298148 -138018617 + L1MA9 LINE L1 6240 6274 -38 216 0 0 0 chr10 2300091 2300115 -138016650 + (T)n Simple_repeat Simple_repeat 1 24 0 200 293 0 27 chr10 2301556 2301631 -138015134 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 323 322 91 34 chr10 2302059 2302323 -138014442 - L1M4 LINE L1 -1377 4769 4491 199 349 24 0 chr10 2302499 2302582 -138014183 - MIR SINE MIR -103 105 21 321 287 83 26 chr10 2303034 2303264 -138013501 - LTR43 LTR ERV1 -167 435 193 249 218 0 68 chr10 2306521 2306668 -138010097 + (TGG)n Simple_repeat Simple_repeat 2 138 0 365 145 0 58 chr10 2306680 2306852 -138009913 + (TGG)n Simple_repeat Simple_repeat 2 163 0 377 275 41 35 chr10 2308547 2308718 -138008047 + MIR SINE MIR 81 252 -10 21 36 0 0 chr10 2309129 2309157 -138007608 + AT_rich Low_complexity Low_complexity 1 28 0 414 302 122 12 chr10 2309603 2309848 -138006917 + MER69 DNA AcHobo 25 296 -2230 988 266 128 38 chr10 2310005 2310670 -138006095 - MER50 LTR ERV1 0 734 10 581 265 160 19 chr10 2310857 2311276 -138005489 + MER69 DNA AcHobo 2049 2526 0 712 228 106 5 chr10 2311339 2311528 -138005237 + MER58A DNA MER1_type 2 209 -15 25 31 0 0 chr10 2312106 2312138 -138004627 + AT_rich Low_complexity Low_complexity 1 32 0 3563 84 18 2 chr10 2313336 2313836 -138002929 - MER41A LTR ERV1 -46 508 1 2201 127 0 6 chr10 2314627 2314942 -138001823 + AluSq SINE Alu 1 313 0 380 250 0 46 chr10 2315298 2315406 -138001359 - MIR SINE MIR 0 262 160 2384 134 10 63 chr10 2315411 2315890 -138000875 + MER4D LTR ERV1 1 454 -418 1170 54 0 0 chr10 2315900 2316047 -138000718 - L1PA4 LINE L1 -3 6152 6006 1824 163 3 3 chr10 2316494 2316815 -137999950 - AluSx SINE Alu 0 312 1 2527 128 49 2 chr10 2316966 2317374 -137999391 - MSTA LTR MaLR -1 427 1 1054 249 92 12 chr10 2318105 2318531 -137998234 - MLT1C LTR MaLR -7 460 1 1292 213 66 3 chr10 2319097 2319417 -137997348 + MLT1B LTR MaLR 7 346 -44 325 217 0 0 chr10 2319421 2319490 -137997275 + MLT1B LTR MaLR 315 383 -7 629 155 17 17 chr10 2319768 2319884 -137996881 + FLAM_C SINE Alu 1 116 -17 207 0 0 0 chr10 2319900 2319923 -137996842 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 459 0 0 0 chr10 2319925 2319976 -137996789 + (TA)n Simple_repeat Simple_repeat 2 52 0 211 244 0 0 chr10 2319979 2320020 -137996745 + MIR SINE MIR 113 153 -109 852 140 110 0 chr10 2320685 2320887 -137995878 - AluSg/x SINE Alu 0 347 131 352 259 28 61 chr10 2322598 2322810 -137993955 + MER46C DNA MER2_type 1 205 -133 693 133 18 0 chr10 2322937 2323050 -137993715 + AluSg/x SINE Alu 192 306 -6 449 182 10 0 chr10 2323198 2323297 -137993468 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 344 276 23 0 chr10 2323297 2323384 -137993381 + L1MC4 LINE L1 6614 6702 -1340 207 182 0 0 chr10 2323385 2323418 -137993347 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1137 128 0 0 chr10 2323418 2323598 -137993167 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 99 0 0 chr10 2323739 2323840 -137992925 + AT_rich Low_complexity Low_complexity 1 101 0 843 290 153 17 chr10 2324198 2324970 -137991795 + L1ME3A LINE L1 5294 6170 0 763 308 47 18 chr10 2328924 2329376 -137987389 - L1ME3A LINE L1 -214 6374 5910 503 283 72 33 chr10 2329620 2329924 -137986841 - L1ME3A LINE L1 -913 5651 5336 1567 270 21 22 chr10 2330025 2330655 -137986110 + L1MC/D LINE L1 4024 4652 -1494 1403 164 9 4 chr10 2330663 2330894 -137985871 - AluSg/x SINE Alu -10 302 71 914 176 109 0 chr10 2330902 2331112 -137985653 - L1MA4A LINE L1 -134 6169 5937 1936 221 43 37 chr10 2331117 2332233 -137984532 + L1MC/D LINE L1 4645 5773 -571 916 277 52 13 chr10 2332233 2332692 -137984073 - L1ME3A LINE L1 -3058 3506 3030 382 241 55 41 chr10 2332705 2332850 -137983915 - L1ME3A LINE L1 -5882 163 17 335 255 168 0 chr10 2332984 2333145 -137983620 - L1MCa LINE L1 -3965 2461 2274 835 171 0 11 chr10 2333335 2333510 -137983255 + GA-rich Low_complexity Low_complexity 4 176 0 1380 231 66 52 chr10 2333819 2334421 -137982344 + L1MC4 LINE L1 7426 8036 -6 270 0 0 0 chr10 2334818 2334848 -137981917 + (T)n Simple_repeat Simple_repeat 1 30 0 318 193 114 57 chr10 2335695 2335783 -137980982 + MIR SINE MIR 20 112 -150 23 68 0 0 chr10 2335833 2335877 -137980888 + AT_rich Low_complexity Low_complexity 1 44 0 2738 23 0 0 chr10 2336801 2337109 -137979656 - AluYa5 SINE Alu -3 308 1 516 280 107 85 chr10 2337138 2337762 -137979003 + L1M4 LINE L1 4341 4978 -1168 1215 135 6 0 chr10 2338407 2338585 -137978180 - AluSq SINE Alu -1 312 134 399 284 245 29 chr10 2338600 2338673 -137978092 - L2 LINE L2 -1830 1484 1428 279 0 0 0 chr10 2338673 2338704 -137978061 + (TG)n Simple_repeat Simple_repeat 1 31 0 399 284 245 29 chr10 2338704 2338838 -137977927 - L2 LINE L2 -1886 1428 1232 1821 52 0 9 chr10 2339675 2339907 -137976858 + L1PA8 LINE L1 5930 6159 -13 293 306 25 64 chr10 2341383 2341540 -137975225 + MER5A DNA MER1_type 35 185 -4 1407 185 83 19 chr10 2341591 2341916 -137974849 + MER7A DNA MER2_type 1 344 -2 2264 68 0 17 chr10 2342386 2342679 -137974086 - AluY SINE Alu -23 288 1 257 267 27 0 chr10 2343376 2343451 -137973314 - HAL1 LINE L1 -616 1891 1815 1919 155 3 0 chr10 2343554 2343845 -137972920 + AluJb SINE Alu 1 292 -20 350 239 20 107 chr10 2344415 2344612 -137972153 - HAL1 LINE L1 -944 1563 1384 23 0 0 0 chr10 2345818 2345841 -137970924 + AT_rich Low_complexity Low_complexity 1 23 0 264 263 50 0 chr10 2346637 2346717 -137970048 + L1MC/D LINE L1 5805 5888 -1920 2027 204 24 5 chr10 2346721 2347137 -137969628 + MSTB LTR MaLR 1 424 -2 585 312 42 64 chr10 2347438 2347890 -137968875 + LTR16A1 LTR ERVL 16 457 0 759 180 0 16 chr10 2350519 2350702 -137966063 + (TG)n Simple_repeat Simple_repeat 1 180 0 1455 151 4 21 chr10 2351567 2351806 -137964959 - AluSg/x SINE Alu -7 305 71 668 244 51 25 chr10 2353465 2353662 -137963103 + L1MC3 LINE L1 40 241 -6155 * 1703 267 139 39 chr10 2353643 2353896 -137962869 + L1MC3 LINE L1 582 808 -5407 2216 109 3 3 chr10 2353896 2354207 -137962558 - AluSx SINE Alu -1 311 1 1703 267 139 39 chr10 2354207 2355916 -137960849 + L1MC3 LINE L1 808 2503 -3712 2759 243 67 23 chr10 2355917 2356869 -137959896 + L1MC3 LINE L1 4092 4604 -1611 1859 161 0 3 chr10 2356869 2357197 -137959568 + AluSx SINE Alu 1 327 0 2759 243 67 23 chr10 2357197 2358106 -137958659 + L1MC3 LINE L1 4604 5472 -743 2215 235 14 28 chr10 2358125 2358772 -137957993 + L1MC3 LINE L1 7210 7847 -7 244 357 9 27 chr10 2359121 2359167 -137957598 + MIR SINE MIR 1 46 -176 2367 110 0 0 chr10 2359167 2359476 -137957289 + AluSq SINE Alu 1 309 -4 244 357 9 27 chr10 2359476 2359592 -137957173 + MIR SINE MIR 46 154 -68 26 0 0 0 chr10 2360082 2360108 -137956657 + AT_rich Low_complexity Low_complexity 1 26 0 4463 119 14 14 chr10 2361042 2361732 -137955033 + LTR8 LTR ERV1 2 691 0 186 133 0 0 chr10 2361893 2361923 -137954842 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 2449 35 6 26 chr10 2362058 2362369 -137954396 - AluY SINE Alu -6 305 1 1011 190 26 4 chr10 2363589 2363821 -137952944 + MLT1B LTR MaLR 153 389 -1 274 105 0 0 chr10 2363910 2363948 -137952817 - Alu SINE Alu -263 38 1 261 0 0 0 chr10 2365122 2365151 -137951614 + (CA)n Simple_repeat Simple_repeat 1 29 0 1942 176 0 3 chr10 2365605 2365917 -137950848 - AluSx SINE Alu -1 311 1 1514 210 0 7 chr10 2366207 2366502 -137950263 - AluJo SINE Alu -19 293 1 1861 181 45 19 chr10 2366752 2367161 -137949604 - Tigger1 DNA MER2_type 0 2418 1999 1693 204 101 69 chr10 2367161 2367266 -137949499 - LTR9 LTR ERV1 0 612 512 2527 54 3 19 chr10 2367266 2367582 -137949183 + AluY SINE Alu 1 311 0 1693 204 101 69 chr10 2367582 2368069 -137948696 - LTR9 LTR ERV1 -100 512 1 * 9664 131 52 31 chr10 2368069 2368894 -137947871 - Tigger1 DNA MER2_type -419 1999 1193 2005 147 40 7 chr10 2368894 2369194 -137947571 - AluSx SINE Alu -2 310 1 9664 131 52 31 chr10 2369194 2370161 -137946604 - Tigger1 DNA MER2_type -1225 1193 170 2013 167 33 31 chr10 2370172 2370721 -137946044 + MLT2A2 LTR ERVL 1 554 0 757 133 44 0 chr10 2370721 2370855 -137945910 - Tigger1 DNA MER2_type -2255 163 24 27 29 0 0 chr10 2373111 2373145 -137943620 + AT_rich Low_complexity Low_complexity 1 34 0 205 204 61 34 chr10 2373277 2373424 -137943341 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 500 283 33 28 chr10 2373747 2373927 -137942838 - MIR SINE MIR -71 191 11 373 305 53 27 chr10 2374117 2374304 -137942461 - L2 LINE L2 -27 3286 3095 962 282 173 38 chr10 2374512 2375302 -137941463 - L2 LINE L2 -616 2698 1802 1240 194 19 0 chr10 2376372 2376629 -137940136 + L1PA16 LINE L1 5891 6155 -11 1793 137 4 0 chr10 2376629 2376892 -137939873 + AluSq SINE Alu 2 265 -48 28 29 0 0 chr10 2376903 2376938 -137939827 + AT_rich Low_complexity Low_complexity 1 35 0 181 0 0 0 chr10 2377346 2377366 -137939399 + (TTTTA)n Simple_repeat Simple_repeat 5 65 0 2005 135 0 0 chr10 2377366 2377647 -137939118 - AluSx SINE Alu -1 301 2 497 337 28 17 chr10 2378249 2378537 -137938228 - ERVL LTR ERVL -3253 2511 2221 255 248 157 81 chr10 2378720 2378930 -137937835 - ERVL LTR ERVL -3083 1913 1688 440 352 8 30 chr10 2378994 2379230 -137937535 - ERVL LTR ERVL -3449 1547 1317 24 0 0 0 chr10 2380181 2380205 -137936560 + AT_rich Low_complexity Low_complexity 1 24 0 816 251 78 31 chr10 2380936 2381368 -137935397 - MLT1E LTR MaLR 0 593 46 2146 120 0 10 chr10 2381787 2382070 -137934695 + AluSx SINE Alu 1 282 -30 234 0 0 0 chr10 2382070 2382096 -137934669 + (TA)n Simple_repeat Simple_repeat 2 27 0 2146 120 0 10 chr10 2382096 2382112 -137934653 + AluSx SINE Alu 282 297 -15 213 175 0 0 chr10 2382243 2382283 -137934482 + (TG)n Simple_repeat Simple_repeat 2 41 0 342 67 0 0 chr10 2383519 2383564 -137933201 + (TG)n Simple_repeat Simple_repeat 2 46 0 257 175 10 52 chr10 2383954 2384051 -137932714 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 277 239 8 90 chr10 2384432 2384503 -137932262 + MLT2C1 LTR ERVL 275 331 -66 2228 92 3 35 chr10 2384503 2384819 -137931946 - AluSx SINE Alu -6 306 1 277 239 8 90 chr10 2384819 2384881 -137931884 + MLT2C1 LTR ERVL 331 397 0 2251 123 0 0 chr10 2385469 2385779 -137930986 + AluSg SINE Alu 1 310 0 195 100 0 0 chr10 2385812 2385842 -137930923 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 218 346 88 11 chr10 2386471 2386653 -137930112 + L2 LINE L2 2196 2391 -923 218 337 45 0 chr10 2386972 2387061 -137929704 + MIR3 SINE MIR 96 188 -20 21 0 0 0 chr10 2387658 2387679 -137929086 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 28 chr10 2387725 2387797 -137928968 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 288 238 46 13 chr10 2387800 2387951 -137928814 + (TA)n Simple_repeat Simple_repeat 2 157 0 2063 99 7 7 chr10 2388080 2388362 -137928403 + AluSx SINE Alu 3 284 -28 1046 201 36 12 chr10 2388810 2389059 -137927706 - L1MB1 LINE L1 0 6168 5914 26 0 0 0 chr10 2392027 2392053 -137924712 + AT_rich Low_complexity Low_complexity 1 26 0 1502 161 8 0 chr10 2393111 2393347 -137923418 + AluJo SINE Alu 35 272 -40 207 0 0 0 chr10 2393363 2393386 -137923379 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1642 115 0 0 chr10 2393548 2393766 -137922999 - AluSx SINE Alu -94 218 1 803 216 72 53 chr10 2393767 2394160 -137922605 + L1MDb LINE L1 1320 1720 -4686 851 167 13 8 chr10 2394289 2394529 -137922236 + CT-rich Low_complexity Low_complexity 1 241 0 2184 290 23 14 chr10 2395085 2396198 -137920567 - L1ME1 LINE L1 -5 6161 5039 1105 255 22 3 chr10 2396201 2396519 -137920246 - MER33 DNA MER1_type 0 324 1 1574 242 62 87 chr10 2396528 2397685 -137919080 - L1ME1 LINE L1 -1112 5034 3917 231 274 12 24 chr10 2397986 2398070 -137918695 + GA-rich Low_complexity Low_complexity 1 83 0 383 324 42 9 chr10 2398314 2398530 -137918235 - MIR SINE MIR -32 230 8 350 298 9 18 chr10 2399223 2399337 -137917428 + L1ME4a LINE L1 5944 6056 -65 342 0 0 0 chr10 2401197 2401235 -137915530 + (CA)n Simple_repeat Simple_repeat 2 39 0 453 161 0 0 chr10 2401691 2401778 -137914987 + (CA)n Simple_repeat Simple_repeat 2 88 0 374 38 0 19 chr10 2403699 2403752 -137913013 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 36 0 0 chr10 2404021 2404049 -137912716 + AT_rich Low_complexity Low_complexity 1 28 0 488 294 124 19 chr10 2405288 2405829 -137910936 - L1ME1 LINE L1 -2260 3886 3289 489 329 39 19 chr10 2405859 2406169 -137910596 - L1ME1 LINE L1 -3461 2685 2370 2258 249 33 12 chr10 2406355 2407047 -137909718 - L1MC3 LINE L1 0 7785 7079 1193 241 68 29 chr10 2407053 2407468 -137909297 - L1MC3 LINE L1 -937 6848 6418 1536 166 3 66 chr10 2407481 2407770 -137908995 + AluJo SINE Alu 11 281 -31 25 75 0 0 chr10 2407907 2407960 -137908805 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 2408016 2408037 -137908728 + AT_rich Low_complexity Low_complexity 1 21 0 1016 222 66 26 chr10 2408730 2409088 -137907677 - MLT2D LTR ERVL -94 426 1 542 103 0 0 chr10 2409138 2409216 -137907549 + MADE1 DNA Mariner 1 78 -2 2102 132 0 0 chr10 2410354 2410649 -137906116 - AluSq SINE Alu -18 295 1 528 283 0 0 chr10 2411221 2411366 -137905399 - MIR SINE MIR -36 226 82 1877 144 38 123 chr10 2411520 2411993 -137904772 - Tigger2 DNA MER2_type 0 2718 2 327 313 23 16 chr10 2412424 2412552 -137904213 - MIR SINE MIR -133 129 1 1349 247 42 37 chr10 2413689 2414256 -137902509 + L1MDa LINE L1 1849 2418 -4122 1433 137 0 0 chr10 2414404 2414609 -137902156 - AluSx SINE Alu -107 205 1 1531 166 13 42 chr10 2415189 2415304 -137901461 + AluJo SINE Alu 2 119 -193 468 0 0 0 chr10 2415304 2415356 -137901409 + (CA)n Simple_repeat Simple_repeat 1 52 0 1531 166 13 42 chr10 2415356 2415547 -137901218 + AluJo SINE Alu 119 299 -13 23 0 0 0 chr10 2415547 2415570 -137901195 + AT_rich Low_complexity Low_complexity 1 23 0 183 139 0 0 chr10 2416198 2416234 -137900531 + (T)n Simple_repeat Simple_repeat 1 36 0 337 289 37 44 chr10 2416413 2416686 -137900079 + LTR37B LTR ERV1 198 468 0 181 231 39 39 chr10 2417392 2417444 -137899321 - MIR3 SINE MIR -7 201 150 639 213 25 0 chr10 2417459 2417619 -137899146 + L1MCa LINE L1 1769 1932 -4494 2369 97 3 0 chr10 2417648 2417958 -137898807 + AluSq SINE Alu 1 311 -2 287 278 140 7 chr10 2418028 2418457 -137898308 + MLT1E1 LTR MaLR 25 513 -111 528 160 14 83 chr10 2418745 2418889 -137897876 - L1M LINE L1 -775 5393 5260 242 331 60 60 chr10 2418934 2419085 -137897680 - L2 LINE L2 -39 3233 3083 228 399 114 0 chr10 2419293 2419486 -137897279 - L2 LINE L2 -549 2765 2551 6119 257 45 45 chr10 2420082 2423510 -137893255 - L1M4 LINE L1 -973 5671 2243 301 189 42 63 chr10 2423621 2423716 -137893049 - L1M4 LINE L1 -5568 974 882 517 314 56 37 chr10 2423797 2424258 -137892507 - L1M4 LINE L1 -5673 869 400 28 0 0 0 chr10 2425433 2425461 -137891304 + AT_rich Low_complexity Low_complexity 1 28 0 7563 224 78 22 chr10 2425664 2426480 -137890285 - L1MC3 LINE L1 -16 7769 7001 234 91 0 0 chr10 2426480 2426513 -137890252 + (TG)n Simple_repeat Simple_repeat 2 34 0 7563 224 78 22 chr10 2426513 2428242 -137888523 - L1MC3 LINE L1 -784 7001 5083 337 105 0 18 chr10 2428383 2428440 -137888325 + MADE1 DNA Mariner 1 56 -24 227 349 40 0 chr10 2428821 2428947 -137887818 + LTR16A LTR ERVL 298 428 -22 2195 116 0 3 chr10 2428947 2429258 -137887507 - AluSx SINE Alu -2 310 1 223 353 72 43 chr10 2431500 2431707 -137885058 - MIR SINE MIR -49 213 1 208 323 46 39 chr10 2432540 2432670 -137884095 - L2 LINE L2 -10 3303 3173 387 267 11 39 chr10 2433929 2434109 -137882656 + L1MA9 LINE L1 6099 6273 -39 23 0 0 0 chr10 2434109 2434132 -137882633 + AT_rich Low_complexity Low_complexity 1 23 0 348 24 0 0 chr10 2435059 2435100 -137881665 + (TG)n Simple_repeat Simple_repeat 1 41 0 277 330 58 111 chr10 2435213 2435370 -137881395 + L2 LINE L2 1764 1928 -1386 2443 116 28 0 chr10 2435370 2435724 -137881041 - THE1B LTR MaLR 0 364 1 277 330 58 111 chr10 2435724 2436100 -137880665 + L2 LINE L2 1928 2269 -1045 189 0 0 0 chr10 2437414 2437435 -137879330 + (TTCTG)n Simple_repeat Simple_repeat 2 22 0 683 89 0 89 chr10 2439059 2439182 -137877583 - MER57B LTR ERV1 0 434 323 1372 237 73 35 chr10 2439293 2439370 -137877395 - L1MD2 LINE L1 -13 6415 6342 2171 119 10 3 chr10 2439370 2439680 -137877085 - AluSq SINE Alu -1 312 1 1372 237 73 35 chr10 2439680 2440989 -137875776 - L1MD2 LINE L1 -86 6342 4909 1415 256 77 33 chr10 2441140 2441236 -137875529 - L1ME1 LINE L1 -18 6148 6058 1492 158 40 66 chr10 2441236 2441540 -137875225 + AluJo SINE Alu 1 296 -16 1415 256 77 33 chr10 2441540 2442076 -137874689 - L1ME1 LINE L1 -108 6058 5488 229 247 155 10 chr10 2442082 2442179 -137874586 - L1MD2 LINE L1 -6251 145 35 588 319 114 23 chr10 2442387 2442957 -137873808 + L2 LINE L2 2454 3076 -237 186 136 34 17 chr10 2443379 2443438 -137873327 + (TA)n Simple_repeat Simple_repeat 1 60 0 236 217 36 42 chr10 2443440 2443606 -137873159 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 25 31 0 0 chr10 2443606 2443638 -137873127 + AT_rich Low_complexity Low_complexity 1 32 0 947 245 62 28 chr10 2444317 2444451 -137872314 + MLT1C LTR MaLR 53 181 -286 2232 117 7 0 chr10 2444451 2444758 -137872007 + AluSp SINE Alu 1 309 -4 947 245 62 28 chr10 2444758 2445023 -137871742 + MLT1C LTR MaLR 181 466 -1 22 0 0 0 chr10 2445610 2445632 -137871133 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 2446382 2446409 -137870356 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1577 107 0 5 chr10 2446412 2446627 -137870138 - AluSg/x SINE Alu -22 290 77 748 255 59 17 chr10 2446733 2447023 -137869742 + MER33 DNA MER1_type 1 302 -22 224 379 137 5 chr10 2447196 2447407 -137869358 - MIR SINE MIR -19 243 5 2167 103 40 7 chr10 2450571 2450871 -137865894 + AluSx SINE Alu 1 310 -2 327 209 0 0 chr10 2451480 2451590 -137865175 + (CA)n Simple_repeat Simple_repeat 2 111 0 515 216 6 0 chr10 2451619 2451786 -137864979 + (CA)n Simple_repeat Simple_repeat 2 169 0 25 0 0 0 chr10 2452195 2452220 -137864545 + AT_rich Low_complexity Low_complexity 1 25 0 369 184 13 13 chr10 2452237 2452313 -137864452 - AluJ/FRAM SINE Alu -7 295 220 8012 26 0 0 chr10 2452334 2454052 -137862713 - L1PA4 LINE L1 0 6155 4439 342 0 0 0 chr10 2454799 2454837 -137861928 + (TG)n Simple_repeat Simple_repeat 2 39 0 521 282 130 6 chr10 2456624 2457155 -137859610 - MLT1E3 LTR MaLR 0 624 25 2309 96 3 0 chr10 2457225 2457527 -137859238 - AluSq SINE Alu -10 303 1 541 177 73 8 chr10 2457666 2457790 -137858975 + L1MC3 LINE L1 7342 7473 -312 218 167 37 0 chr10 2457800 2457854 -137858911 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 290 161 18 0 chr10 2457861 2457917 -137858848 - L1MC3 LINE L1 -312 7473 7417 381 300 13 21 chr10 2458655 2459013 -137857752 + T-rich Low_complexity Low_complexity 1 482 0 2286 67 3 0 chr10 2460877 2461177 -137855588 + AluY SINE Alu 4 304 -7 239 143 0 18 chr10 2462578 2462634 -137854131 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 550 0 29 0 chr10 2463309 2463379 -137853386 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 2259 99 0 10 chr10 2463534 2463838 -137852927 - AluSp SINE Alu -12 301 1 346 306 66 53 chr10 2464987 2465307 -137851458 + L1M4 LINE L1 4484 4807 -1339 1137 260 19 0 chr10 2465418 2465733 -137851032 - L1MCb LINE L1 -5078 967 647 307 202 62 70 chr10 2465756 2465885 -137850880 + L1MCb LINE L1 934 1061 -4984 * 1211 153 7 65 chr10 2465877 2466152 -137850613 + L1MC1 LINE L1 5623 5881 -452 31 0 0 0 chr10 2466152 2466183 -137850582 + AT_rich Low_complexity Low_complexity 1 31 0 372 157 47 6 chr10 2466183 2466355 -137850410 + (TA)n Simple_repeat Simple_repeat 2 180 0 274 240 54 0 chr10 2468443 2468572 -137848193 + (CTAG)n Simple_repeat Simple_repeat 3 138 0 2182 55 15 0 chr10 2470051 2470322 -137846443 - AluY SINE Alu -7 304 30 240 301 113 23 chr10 2470381 2470514 -137846251 + MIR SINE MIR 115 259 -3 22 0 0 0 chr10 2472957 2472979 -137843786 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr10 2474442 2474468 -137842297 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 330 9 57 chr10 2475146 2475252 -137841513 - MIR SINE MIR -68 140 40 240 200 0 0 chr10 2475848 2475908 -137840857 + (TA)n Simple_repeat Simple_repeat 1 60 0 566 344 114 14 chr10 2476266 2476624 -137840141 + L2 LINE L2 2920 3313 0 268 309 36 12 chr10 2476715 2476799 -137839966 - L2 LINE L2 -19 3294 3209 813 205 127 72 chr10 2476898 2477244 -137839521 + MLT1A1 LTR MaLR 1 365 0 1585 215 0 0 chr10 2477550 2477834 -137838931 + AluJb SINE Alu 10 293 -19 1279 209 38 62 chr10 2478499 2478872 -137837893 + MLT1A1 LTR MaLR 1 364 -1 25 0 0 0 chr10 2479337 2479362 -137837403 + AT_rich Low_complexity Low_complexity 1 25 0 287 307 162 0 chr10 2479903 2480082 -137836683 - L1ME LINE L1 -300 5864 5657 4953 248 57 57 chr10 2480102 2480482 -137836283 + L1M4 LINE L1 2 380 -6445 2353 129 11 5 chr10 2480482 2480855 -137835910 + THE1C LTR MaLR 1 375 0 4953 248 57 57 chr10 2480855 2481861 -137834904 + L1M4 LINE L1 380 1384 -5441 2299 114 0 0 chr10 2481861 2482167 -137834598 + AluSq SINE Alu 1 306 -7 4953 248 57 57 chr10 2482167 2483270 -137833495 + L1M4 LINE L1 1384 2656 -4169 477 226 57 56 chr10 2483365 2483558 -137833207 - L1ME LINE L1 -685 5479 5288 180 0 0 0 chr10 2483558 2483578 -137833187 + (TA)n Simple_repeat Simple_repeat 2 21 0 2283 80 0 0 chr10 2483578 2483867 -137832898 - AluY SINE Alu -22 289 1 477 226 57 56 chr10 2483867 2483957 -137832808 - L1ME LINE L1 -875 5289 5192 234 0 0 0 chr10 2484006 2484032 -137832733 + (CA)n Simple_repeat Simple_repeat 1 26 0 322 310 133 22 chr10 2484059 2484285 -137832480 + L1ME LINE L1 377 627 -5443 291 313 0 0 chr10 2484458 2484554 -137832211 + HsTC2 DNA Tc2 1802 1897 -1 206 323 16 0 chr10 2486482 2486544 -137830221 + C-rich Low_complexity Low_complexity 5 67 0 339 354 50 0 chr10 2486639 2486800 -137829965 - MIR SINE MIR -74 188 20 334 171 81 25 chr10 2486828 2486907 -137829858 - FRAM/FAM SINE Alu -90 85 16 2098 131 3 0 chr10 2487832 2488130 -137828635 + AluSx SINE Alu 1 299 -13 272 282 13 0 chr10 2488483 2488561 -137828204 + MER116 DNA Mariner 1 79 -1 31 26 0 0 chr10 2488984 2489022 -137827743 + AT_rich Low_complexity Low_complexity 1 38 0 2021 127 3 29 chr10 2489434 2489748 -137827017 + AluSx SINE Alu 1 306 -6 257 246 0 0 chr10 2489787 2489848 -137826917 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 216 381 41 0 chr10 2490733 2490830 -137825935 + L2 LINE L2 3158 3258 -14 2363 86 3 13 chr10 2490917 2491053 -137825712 + AluSx SINE Alu 1 137 -196 2266 85 7 16 chr10 2491053 2491360 -137825405 + AluY SINE Alu 1 304 -7 2363 86 3 13 chr10 2491360 2491559 -137825206 + AluSx SINE Alu 137 333 0 2172 96 7 10 chr10 2492218 2492510 -137824255 + AluSg SINE Alu 1 291 -19 2475 59 7 0 chr10 2493134 2493441 -137823324 - AluY SINE Alu -2 309 1 423 312 76 62 chr10 2494813 2495266 -137821499 - L1MCc LINE L1 -4574 2548 2103 279 93 0 0 chr10 2495266 2495309 -137821456 + (TG)n Simple_repeat Simple_repeat 2 44 0 423 312 76 62 chr10 2495309 2496555 -137820210 - L1MCc LINE L1 -5019 2103 655 768 303 83 5 chr10 2496675 2497098 -137819667 - L1MCc LINE L1 -5949 474 19 1959 143 0 0 chr10 2497315 2497595 -137819170 + AluSx SINE Alu 1 280 -32 390 57 0 0 chr10 2497598 2497651 -137819114 + (CA)n Simple_repeat Simple_repeat 2 54 0 2514 55 0 0 chr10 2498098 2498408 -137818357 - AluY SINE Alu -1 310 1 233 140 18 0 chr10 2498545 2498602 -137818163 + GA-rich Low_complexity Low_complexity 2 59 0 1902 144 4 0 chr10 2499546 2499862 -137816903 + AluSx SINE Alu 6 322 0 21 0 0 0 chr10 2500010 2500031 -137816734 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 2501628 2501659 -137815106 + AT_rich Low_complexity Low_complexity 1 31 0 702 202 0 4 chr10 2502699 2502940 -137813825 + GA-rich Low_complexity Low_complexity 1 239 0 246 252 103 47 chr10 2503068 2503175 -137813590 - L2 LINE L2 0 3272 3160 1158 102 36 0 chr10 2503268 2503435 -137813330 + L1PA13 LINE L1 5972 6144 -19 556 321 32 0 chr10 2503804 2503991 -137812774 - MIR SINE MIR -4 258 66 337 255 0 57 chr10 2505056 2505162 -137811603 + L2 LINE L2 2458 2557 -757 1515 97 0 29 chr10 2505173 2505379 -137811386 - AluSq SINE Alu -113 200 1 239 280 32 64 chr10 2505415 2505540 -137811225 + L2 LINE L2 3193 3313 0 24 67 0 0 chr10 2507018 2507063 -137809702 + AT_rich Low_complexity Low_complexity 1 45 0 386 283 53 25 chr10 2508355 2508670 -137808095 - L1MEc LINE L1 -5918 478 91 * 2036 217 46 19 chr10 2508664 2509300 -137807465 - L1M4 LINE L1 -1316 4830 4178 2127 138 0 0 chr10 2510539 2510835 -137805930 + AluSx SINE Alu 3 298 -14 1407 233 43 62 chr10 2511646 2511963 -137804802 + MLT1D LTR MaLR 1 305 -200 370 145 53 26 chr10 2511963 2512039 -137804726 + MADE1 DNA Mariner 3 80 0 1407 233 43 62 chr10 2512039 2512234 -137804531 + MLT1D LTR MaLR 305 502 -3 1017 205 10 0 chr10 2512331 2512526 -137804239 + L1MC3 LINE L1 6666 6862 -923 1322 248 103 15 chr10 2512562 2513017 -137803748 + L1MC3 LINE L1 7282 7776 -9 29 28 0 0 chr10 2513041 2513077 -137803688 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr10 2513250 2513276 -137803489 + AT_rich Low_complexity Low_complexity 1 26 0 437 306 36 16 chr10 2513326 2513519 -137803246 + L1MC5 LINE L1 6995 7191 -770 1924 131 17 17 chr10 2514162 2514459 -137802306 + AluSx SINE Alu 1 297 -15 394 281 82 0 chr10 2515847 2515982 -137800783 - MLT1H LTR MaLR -26 523 378 394 182 0 39 chr10 2516091 2516168 -137800597 - AluS SINE Alu -228 74 1 213 281 11 34 chr10 2516604 2516693 -137800072 - MIR SINE MIR -23 239 153 234 184 0 0 chr10 2517785 2517834 -137798931 + L1ME4a LINE L1 6069 6117 -4 369 298 99 33 chr10 2518059 2518331 -137798434 + MLT1H LTR MaLR 62 351 -198 920 60 0 0 chr10 2521485 2521602 -137795163 + L1PA4 LINE L1 6031 6147 -8 2029 69 0 138 chr10 2522002 2522351 -137794414 + AluY SINE Alu 1 301 -10 289 313 109 16 chr10 2522944 2523072 -137793693 + MIR SINE MIR 12 151 -111 32 43 0 0 chr10 2523979 2524025 -137792740 + AT_rich Low_complexity Low_complexity 1 46 0 329 311 0 0 chr10 2524028 2524118 -137792647 - L1MC4 LINE L1 -1339 6703 6614 316 322 0 0 chr10 2524050 2524140 -137792625 + L1MC4 LINE L1 6614 6703 -1339 * 2319 79 14 0 chr10 2524151 2524441 -137792324 - AluY SINE Alu -17 294 1 22 35 0 0 chr10 2524833 2524862 -137791903 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 2524997 2525026 -137791739 + AT_rich Low_complexity Low_complexity 1 29 0 454 259 78 18 chr10 2525359 2525525 -137791240 - MLT1E2 LTR MaLR -11 615 440 486 245 15 67 chr10 2525760 2525978 -137790787 + L1MCa LINE L1 1508 1906 -4701 1594 257 32 20 chr10 2525978 2526624 -137790141 + L1MCa LINE L1 2899 3552 -2874 488 264 110 0 chr10 2527004 2527186 -137789579 + MER5C DNA MER1_type 1 202 -122 205 195 0 0 chr10 2528639 2528680 -137788085 + (TA)n Simple_repeat Simple_repeat 1 41 0 2292 206 41 4 chr10 2529556 2530022 -137786743 + MER66B LTR ERV1 1 483 -3 233 308 19 19 chr10 2530025 2530129 -137786636 + L1MEd LINE L1 324 427 -5692 457 177 37 7 chr10 2530319 2530591 -137786174 + (TA)n Simple_repeat Simple_repeat 1 280 0 337 184 48 0 chr10 2530606 2530774 -137785991 + (TA)n Simple_repeat Simple_repeat 2 177 0 495 155 45 0 chr10 2530798 2531133 -137785632 + (TA)n Simple_repeat Simple_repeat 1 350 0 1928 190 68 26 chr10 2531133 2531591 -137785174 + L1MC2 LINE L1 5859 6335 -9 225 352 38 48 chr10 2531889 2532099 -137784666 + L3 LINE CR1 816 1023 -554 208 344 0 0 chr10 2532180 2532241 -137784524 - MIR SINE MIR -6 256 196 189 308 68 60 chr10 2532694 2532827 -137783938 + MIR SINE MIR 20 153 -109 272 222 0 48 chr10 2533184 2533247 -137783518 + MER4-int LTR ERV1 1112 1171 -5427 2299 110 7 0 chr10 2533996 2534305 -137782460 - AluSx SINE Alu -1 311 1 2030 115 7 7 chr10 2535101 2535387 -137781378 - AluSx SINE Alu -26 286 1 24 32 0 0 chr10 2536335 2536366 -137780399 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 2536390 2536414 -137780351 + AT_rich Low_complexity Low_complexity 1 24 0 203 288 25 94 chr10 2537568 2537728 -137779037 + L2 LINE L2 2906 3054 -218 2629 110 22 0 chr10 2538152 2538508 -137778257 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr10 2540134 2540160 -137776605 + (A)n Simple_repeat Simple_repeat 1 26 0 322 225 0 0 chr10 2540392 2540463 -137776302 - L1ME4a LINE L1 0 6121 6051 2474 48 7 0 chr10 2541024 2541316 -137775449 - AluY SINE Alu -8 303 10 263 338 14 27 chr10 2541798 2541946 -137774819 + L1MCc LINE L1 763 908 -5515 2009 111 18 56 chr10 2542194 2542429 -137774336 + THE1B LTR MaLR 3 223 -141 2170 121 0 3 chr10 2542429 2542727 -137774038 + AluSx SINE Alu 1 297 -15 2009 111 18 56 chr10 2542727 2542832 -137773933 + THE1B LTR MaLR 223 330 -34 722 305 44 29 chr10 2542915 2543327 -137773438 + L1MCc LINE L1 1197 1608 -4887 317 351 15 8 chr10 2543344 2543478 -137773287 + L1M4 LINE L1 4829 4963 -1183 647 283 46 8 chr10 2543484 2543721 -137773044 + L1M4 LINE L1 4004 4249 -1897 823 280 42 21 chr10 2543729 2544111 -137772654 + L1M4 LINE L1 4292 4681 -1465 261 281 66 12 chr10 2546238 2546405 -137770360 + L1MCc LINE L1 523 698 -6243 229 155 21 62 chr10 2546994 2547091 -137769674 + L1MCc LINE L1 1660 1752 -5189 * 815 255 31 80 chr10 2547059 2547605 -137769160 + L1MCc LINE L1 1683 2213 -4728 2171 123 0 7 chr10 2548071 2548402 -137768363 - AluSx SINE Alu 0 330 2 1335 72 0 0 chr10 2548887 2549067 -137767698 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 693 79 26 9 chr10 2549067 2549181 -137767584 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 214 29 57 0 chr10 2549837 2549872 -137766893 + (TA)n Simple_repeat Simple_repeat 1 37 0 281 26 26 0 chr10 2551294 2551332 -137765433 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 243 0 0 0 chr10 2552011 2552038 -137764727 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2834 118 3 0 chr10 2552214 2552588 -137764177 - THE1C LTR MaLR 0 375 1 2539 136 24 2 chr10 2552950 2553361 -137763404 + MSTB1 LTR MaLR 1 420 -12 21 82 0 0 chr10 2553939 2553988 -137762777 + AT_rich Low_complexity Low_complexity 1 49 0 1636 103 45 5 chr10 2554288 2554512 -137762253 + AluSx SINE Alu 60 292 -20 2529 70 0 3 chr10 2555583 2555895 -137760870 - AluY SINE Alu 0 311 1 245 203 63 101 chr10 2556095 2556253 -137760512 + HAL1b LINE L1 654 805 -543 23 54 0 0 chr10 2556705 2556742 -137760023 + AT_rich Low_complexity Low_complexity 1 37 0 2659 266 126 7 chr10 2558301 2559172 -137757593 + L1M4b LINE L1 1 975 -5884 2529 278 57 45 chr10 2559651 2561054 -137755711 + L1M4b LINE L1 1120 2686 -4452 995 109 0 0 chr10 2561211 2561339 -137755426 - AluSq/x SINE Alu -184 128 1 660 287 0 32 chr10 2561402 2561618 -137755147 - MER3 DNA MER1_type 0 209 1 1921 202 17 6 chr10 2561814 2562175 -137754590 - MLT1A1 LTR MaLR 0 365 1 1467 265 23 25 chr10 2562375 2562846 -137753919 - MER110 LTR ERV1 -5 486 17 225 227 0 0 chr10 2562857 2562901 -137753864 - MER110 LTR ERV1 -446 45 2 207 186 0 0 chr10 2563663 2563706 -137753059 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 23 0 0 0 chr10 2563958 2563981 -137752784 + AT_rich Low_complexity Low_complexity 1 23 0 1541 264 57 11 chr10 2564499 2564939 -137751826 - LTR40b LTR ERVL 0 462 3 532 204 168 77 chr10 2565252 2565552 -137751213 + MLT1C LTR MaLR 51 443 -24 367 68 34 0 chr10 2565560 2565619 -137751146 + (TG)n Simple_repeat Simple_repeat 1 61 0 3845 188 33 11 chr10 2566416 2567113 -137749652 - MER44D DNA MER2_type -7 598 15 240 298 26 18 chr10 2567259 2567373 -137749392 + L1MC/D LINE L1 5547 5661 -2147 2112 103 7 33 chr10 2567385 2567687 -137749078 + AluSx SINE Alu 1 294 -18 231 36 0 0 chr10 2567687 2567715 -137749050 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 290 194 0 10 chr10 2568384 2568482 -137748283 + (CA)n Simple_repeat Simple_repeat 1 97 0 21 89 0 0 chr10 2568579 2568635 -137748130 + AT_rich Low_complexity Low_complexity 1 56 0 243 286 24 0 chr10 2568636 2568720 -137748045 + L1MC/D LINE L1 5771 5856 -1952 261 0 0 0 chr10 2568950 2568979 -137747786 + (TG)n Simple_repeat Simple_repeat 2 30 0 377 279 68 26 chr10 2569696 2569886 -137746879 - LTR16B LTR ERVL 0 464 267 201 237 13 26 chr10 2623025 2623101 -137693664 + A-rich Low_complexity Low_complexity 2 76 0 41 0 0 0 chr10 2623789 2623830 -137692935 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr10 2624627 2624656 -137692109 + (CA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 2624722 2624755 -137692010 + AT_rich Low_complexity Low_complexity 1 33 0 867 182 54 54 chr10 2625113 2625316 -137691449 + THE1B LTR MaLR 107 309 -55 1057 284 101 22 chr10 2625484 2625998 -137690767 - L2 LINE L2 -1 3312 2748 423 303 229 14 chr10 2626034 2626387 -137690378 - L2 LINE L2 -695 2619 2191 3346 113 26 27 chr10 2626405 2626980 -137689785 + MER51A LTR ERV1 1 634 0 323 285 145 73 chr10 2626980 2627284 -137689481 - L2 LINE L2 -1126 2188 1853 2257 115 0 3 chr10 2627284 2627598 -137689167 + AluSq SINE Alu 1 313 0 323 285 145 73 chr10 2627598 2627651 -137689114 - L2 LINE L2 -1461 1853 1805 24 0 0 0 chr10 2627673 2627697 -137689068 + AT_rich Low_complexity Low_complexity 1 24 0 1149 160 27 18 chr10 2627697 2627916 -137688849 - L1MB2 LINE L1 -3 6168 5948 384 262 0 12 chr10 2627955 2628039 -137688726 - MER5A DNA MER1_type -106 83 1 490 337 12 0 chr10 2628051 2628223 -137688542 - MER5B DNA MER1_type -4 174 1 * 935 309 182 19 chr10 2628223 2628863 -137687902 - L2 LINE L2 -1800 1514 770 502 308 140 22 chr10 2628863 2629184 -137687581 - L2 LINE L2 -2946 368 10 2177 134 3 0 chr10 2629630 2629937 -137686828 + AluSx SINE Alu 1 308 -4 2237 122 0 3 chr10 2632434 2632745 -137684020 + AluSg SINE Alu 1 310 0 9769 163 9 6 chr10 2633266 2636013 -137680752 + L1PB1 LINE L1 3394 6151 0 917 190 0 0 chr10 2636158 2636316 -137680449 - AluSg/x SINE Alu -20 290 133 249 313 133 16 chr10 2636559 2636687 -137680078 + MER5B DNA MER1_type 2 144 -34 185 309 18 0 chr10 2637741 2637796 -137678969 - MIR3 SINE MIR -7 201 146 3196 196 60 4 chr10 2637807 2638322 -137678443 - L1MA4A LINE L1 0 6303 5739 279 79 0 0 chr10 2638322 2638360 -137678405 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 3196 196 60 4 chr10 2638360 2638527 -137678238 - L1MA4A LINE L1 -564 5739 5583 1533 111 53 0 chr10 2638693 2638901 -137677864 - AluSg SINE Alu -52 258 40 389 196 0 10 chr10 2640372 2640469 -137676296 + (TG)n Simple_repeat Simple_repeat 2 97 0 1507 154 3 65 chr10 2641223 2641515 -137675250 + AluJo SINE Alu 9 282 -30 481 317 102 15 chr10 2641564 2641968 -137674797 - L2 LINE L2 -1717 1597 1159 366 223 108 47 chr10 2642658 2642830 -137673935 - MLT1J1 LTR MaLR -8 417 246 203 231 31 0 chr10 2645979 2646044 -137670721 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 297 287 165 9 chr10 2646611 2646726 -137670039 + MIR SINE MIR 27 159 -103 218 309 25 12 chr10 2646741 2646822 -137669943 + MIR SINE MIR 116 197 -65 2406 92 0 0 chr10 2647076 2647379 -137669386 + AluSq SINE Alu 1 303 -10 372 357 28 7 chr10 2647531 2647674 -137669091 + MER91A DNA MER1_type 3 148 -48 212 184 0 0 chr10 2647887 2647925 -137668840 + A-rich Low_complexity Low_complexity 1 38 0 307 290 43 91 chr10 2648185 2648729 -137668036 + L1ME LINE L1 5327 5855 -266 201 231 39 0 chr10 2648729 2648781 -137667984 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 211 118 29 0 chr10 2650115 2650149 -137666616 + L2 LINE L2 3233 3267 -5 182 61 0 30 chr10 2650225 2650258 -137666507 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1717 142 0 0 chr10 2650261 2650501 -137666264 - AluJb SINE Alu -27 285 46 28 48 0 0 chr10 2650551 2650593 -137666172 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr10 2651067 2651098 -137665667 + AT_rich Low_complexity Low_complexity 1 31 0 3408 170 69 11 chr10 2652189 2652416 -137664349 - L1PB4 LINE L1 -3 6153 5941 2047 147 69 30 chr10 2652416 2652777 -137663988 + THE1C LTR MaLR 1 375 0 3408 170 69 11 chr10 2652777 2653190 -137663575 - L1PB4 LINE L1 -215 5941 5476 1096 194 51 0 chr10 2653190 2653386 -137663379 - AluJo SINE Alu -20 292 87 47 33 0 0 chr10 2654335 2654396 -137662369 + AT_rich Low_complexity Low_complexity 1 61 0 669 169 0 78 chr10 2654562 2654735 -137662030 + FLAM_C SINE Alu 1 133 0 1929 158 3 16 chr10 2654741 2655057 -137661708 - AluJb SINE Alu 0 312 1 180 167 0 28 chr10 2655807 2655843 -137660922 + L2 LINE L2 3222 3256 -16 180 263 0 66 chr10 2655980 2656056 -137660709 + L3 LINE CR1 1459 1529 -48 2192 121 7 0 chr10 2656217 2656524 -137660241 - AluSc SINE Alu 0 309 1 454 331 14 0 chr10 2657282 2657427 -137659338 - MIR SINE MIR -2 260 114 2243 69 3 17 chr10 2659054 2659345 -137657420 - AluSc SINE Alu -22 287 1 634 216 112 0 chr10 2660272 2660397 -137656368 - FAM SINE Alu -27 158 20 2050 136 3 0 chr10 2660463 2660758 -137656007 + AluSq SINE Alu 1 296 -17 2153 118 7 3 chr10 2660793 2661090 -137655675 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr10 2661704 2661728 -137655037 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 733 132 19 0 chr10 2662382 2662488 -137654277 - AluSq/x SINE Alu -204 109 2 223 284 43 43 chr10 2662952 2663068 -137653697 + L2 LINE L2 2170 2285 -1029 396 123 15 0 chr10 2663484 2663549 -137653216 - MER41A LTR ERV1 -86 468 403 342 217 36 0 chr10 2663763 2663929 -137652836 + (TA)n Simple_repeat Simple_repeat 1 172 0 931 236 75 78 chr10 2663993 2664404 -137652361 + MLT2D LTR ERVL 1 410 -4 27 73 0 0 chr10 2666183 2666238 -137650527 + AT_rich Low_complexity Low_complexity 1 55 0 207 292 0 42 chr10 2666281 2666377 -137650388 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 249 341 0 11 chr10 2667192 2667283 -137649482 + CT-rich Low_complexity Low_complexity 4 93 0 2270 119 3 0 chr10 2667940 2668250 -137648515 + AluSp SINE Alu 1 311 -2 1999 135 4 4 chr10 2668686 2669010 -137647755 + AluSx SINE Alu 3 326 0 3174 147 18 6 chr10 2669171 2669674 -137647091 - MER75 DNA T2_type -5 509 1 576 249 125 66 chr10 2670258 2670745 -137646020 - HAL1 LINE L1 -115 2392 1877 1282 294 121 51 chr10 2670842 2670901 -137645864 - HAL1 LINE L1 -794 1713 1660 2371 95 0 0 chr10 2670901 2671197 -137645568 + AluY SINE Alu 1 296 -15 1282 294 121 51 chr10 2671197 2671916 -137644849 - HAL1 LINE L1 -847 1660 837 267 54 0 0 chr10 2671916 2671953 -137644812 + (TG)n Simple_repeat Simple_repeat 2 38 0 1282 294 121 51 chr10 2671953 2672246 -137644519 - HAL1 LINE L1 -1670 837 566 234 300 71 52 chr10 2672461 2672671 -137644094 - HAL1 LINE L1 -2266 241 28 298 320 25 16 chr10 2672859 2672981 -137643784 - MIR3 SINE MIR -31 177 55 224 283 88 38 chr10 2673909 2674068 -137642697 + L2 LINE L2 2073 2239 -1075 406 317 63 10 chr10 2674087 2674292 -137642473 - MIR SINE MIR -1 261 46 396 374 94 11 chr10 2674452 2674920 -137641845 + L2 LINE L2 2361 2867 -447 304 315 128 62 chr10 2675235 2675641 -137641124 - L2 LINE L2 -337 2977 2545 376 104 30 15 chr10 2676002 2676069 -137640696 + MADE1 DNA Mariner 13 80 0 211 246 18 0 chr10 2676481 2676538 -137640227 + GA-rich Low_complexity Low_complexity 4 61 0 271 289 104 81 chr10 2677479 2677716 -137639049 + L1MC4 LINE L1 6197 6427 -1466 2275 115 3 0 chr10 2677716 2678020 -137638745 + AluSx SINE Alu 1 305 -7 271 289 104 81 chr10 2678020 2678350 -137638415 + L1MC4 LINE L1 6427 6862 -1031 186 103 0 0 chr10 2679360 2679389 -137637376 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 344 307 102 49 chr10 2679433 2679638 -137637127 + HAL1b LINE L1 392 607 -741 2295 143 28 6 chr10 2679653 2680009 -137636756 - THE1B LTR MaLR 0 364 1 593 90 0 0 chr10 2680796 2680874 -137635891 - MADE1 DNA Mariner -2 78 1 235 170 21 0 chr10 2683760 2683807 -137632958 + T-rich Low_complexity Low_complexity 2 49 0 2085 182 57 25 chr10 2685103 2686221 -137630544 + L1MB2 LINE L1 30 1381 -5003 1962 241 66 9 chr10 2686214 2687257 -137629508 + L1MB2 LINE L1 2239 3345 -3037 * 4180 196 38 50 chr10 2687416 2688645 -137628120 + L1MB2 LINE L1 4266 5479 -903 3033 180 30 9 chr10 2688645 2689274 -137627491 + L1MB2 LINE L1 5756 6397 -10 201 277 106 21 chr10 2689824 2689918 -137626847 - MIR3 SINE MIR -95 113 12 180 222 0 0 chr10 2690674 2690710 -137626055 - L2 LINE L2 -5 3308 3273 222 294 35 35 chr10 2690883 2690968 -137625797 + L2 LINE L2 3179 3263 -9 1722 201 31 3 chr10 2690976 2691330 -137625435 + MLT1A1 LTR MaLR 2 365 0 21 36 0 0 chr10 2691710 2691738 -137625027 + AT_rich Low_complexity Low_complexity 1 28 0 4768 86 5 5 chr10 2691748 2692401 -137624364 + L1PA10 LINE L1 5506 6158 -10 235 260 31 31 chr10 2692498 2692625 -137624140 + L1ME LINE L1 5762 5888 -233 258 231 0 0 chr10 2693202 2693267 -137623498 + (CA)n Simple_repeat Simple_repeat 2 66 0 356 289 46 43 chr10 2693357 2693637 -137623128 + L1ME3A LINE L1 5676 5956 -214 1239 113 5 0 chr10 2693739 2693925 -137622840 + THE1C LTR MaLR 1 187 -188 670 219 114 0 chr10 2693925 2694126 -137622639 + L1M4 LINE L1 2451 2674 -3472 1297 254 81 40 chr10 2694271 2694595 -137622170 + L1M4 LINE L1 2897 3206 -2940 180 0 0 0 chr10 2694595 2694615 -137622150 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1297 254 81 40 chr10 2694615 2695204 -137621561 + L1M4 LINE L1 3206 3847 -2299 505 340 43 24 chr10 2695210 2695631 -137621134 + L1MA9 LINE L1 2 430 -5711 314 384 88 16 chr10 2695803 2696110 -137620655 + L1MA9 LINE L1 428 756 -5455 1818 208 38 25 chr10 2696136 2696725 -137620040 + L1MA9 LINE L1 867 1461 -4680 840 215 20 5 chr10 2696721 2696921 -137619844 + L1MA9 LINE L1 4954 5156 -1054 * 5424 44 5 2 chr10 2696922 2697963 -137618802 - SVA Other Other -954 1384 16 207 0 0 0 chr10 2698063 2698086 -137618679 + (GGGAGA)n Simple_repeat Simple_repeat 4 26 0 2209 190 23 23 chr10 2698097 2698799 -137617966 + L1MA9 LINE L1 5152 5857 -498 226 248 30 20 chr10 2698806 2698907 -137617858 + (TA)n Simple_repeat Simple_repeat 2 103 0 858 185 54 0 chr10 2698921 2699149 -137617616 + L1MA9 LINE L1 5870 6131 -101 2719 216 55 4 chr10 2699149 2699776 -137616989 + L1MB7 LINE L1 5297 5965 -219 1423 114 139 147 chr10 2699776 2699937 -137616828 + MSTA LTR MaLR 1 162 -266 2237 121 0 0 chr10 2699937 2700242 -137616523 + AluSx SINE Alu 1 305 -7 1423 114 139 147 chr10 2700242 2700510 -137616255 + MSTA LTR MaLR 162 427 -1 2719 216 55 4 chr10 2700510 2700589 -137616176 + L1MB7 LINE L1 5965 6039 -145 229 297 0 0 chr10 2700593 2700667 -137616098 + L1MB7 LINE L1 6093 6166 -18 1287 247 34 36 chr10 2701077 2701651 -137615114 + L1ME LINE L1 5163 5739 -425 588 296 100 17 chr10 2703074 2703304 -137613461 + MIR SINE MIR 3 251 -11 297 0 0 0 chr10 2704677 2704710 -137612055 + (TA)n Simple_repeat Simple_repeat 2 34 0 1181 74 4 8 chr10 2704929 2705191 -137611574 + (TTTC)n Simple_repeat Simple_repeat 1 261 0 1831 122 0 0 chr10 2705194 2705441 -137611324 - AluSx SINE Alu -24 288 42 22 70 0 0 chr10 2708863 2708906 -137607859 + AT_rich Low_complexity Low_complexity 1 43 0 338 218 0 0 chr10 2709415 2709502 -137607263 + L1MA9 LINE L1 6290 6376 0 227 208 0 19 chr10 2710234 2710287 -137606478 + GA-rich Low_complexity Low_complexity 2 53 0 24 32 0 0 chr10 2711100 2711131 -137605634 + AT_rich Low_complexity Low_complexity 1 31 0 771 213 29 33 chr10 2711140 2711397 -137605368 + MLT1A2 LTR MaLR 179 374 0 2226 275 182 17 chr10 2711432 2712426 -137604339 + L1MDa LINE L1 44 1201 -5339 1439 205 76 12 chr10 2712417 2712827 -137603938 + L1MDa LINE L1 1808 2243 -4297 * 180 0 0 0 chr10 2712931 2712951 -137603814 + (GA)n Simple_repeat Simple_repeat 2 21 0 2128 122 0 0 chr10 2712958 2713254 -137603511 - AluSx SINE Alu -14 298 3 1835 158 27 27 chr10 2713256 2713624 -137603141 - Tigger2a DNA MER2_type -66 368 1 457 234 102 15 chr10 2713699 2713964 -137602801 + L1MDa LINE L1 3288 3575 -2965 28 29 0 0 chr10 2714149 2714184 -137602581 + AT_rich Low_complexity Low_complexity 1 35 0 415 326 43 66 chr10 2714630 2715192 -137601573 - L2 LINE L2 -1 3312 2766 21 0 0 0 chr10 2715348 2715369 -137601396 + AT_rich Low_complexity Low_complexity 1 21 0 2007 149 0 13 chr10 2715369 2715670 -137601095 - AluSx SINE Alu -15 297 1 2584 62 0 0 chr10 2717493 2717798 -137598967 - AluY SINE Alu -6 305 1 198 0 0 0 chr10 2718610 2718632 -137598133 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2087 121 0 0 chr10 2718634 2718915 -137597850 - AluSx SINE Alu -31 281 1 26 23 0 23 chr10 2719125 2719139 -137597626 + AT_rich Low_complexity Low_complexity 1 14 -29 2114 102 3 3 chr10 2719139 2719423 -137597342 + AluSg1 SINE Alu 1 284 -25 26 23 0 23 chr10 2719423 2719452 -137597313 + AT_rich Low_complexity Low_complexity 14 43 0 201 302 47 38 chr10 2721470 2721576 -137595189 - L3b LINE CR1 -209 1374 1268 183 293 0 17 chr10 2721696 2721754 -137595011 - L3 LINE CR1 -413 1164 1108 1521 209 42 45 chr10 2721836 2721976 -137594789 - L1MA7 LINE L1 -1 6290 6151 267 31 0 0 chr10 2721976 2722008 -137594757 + (TG)n Simple_repeat Simple_repeat 1 32 0 1521 209 42 45 chr10 2722008 2722292 -137594473 - L1MA7 LINE L1 -140 6151 5867 876 203 38 38 chr10 2722631 2722867 -137593898 + L1MCa LINE L1 21 256 -6170 * 1037 227 82 9 chr10 2722866 2723183 -137593582 + L1MCa LINE L1 787 1126 -5300 1729 153 7 7 chr10 2723412 2723687 -137593078 + AluJo SINE Alu 1 275 -37 329 277 31 15 chr10 2724933 2725063 -137591702 + MLT1H LTR MaLR 392 523 -26 358 165 54 64 chr10 2725172 2725293 -137591472 - MLT1I LTR MaLR 0 595 280 313 302 38 0 chr10 2726833 2726939 -137589826 - L1MC4 LINE L1 -1340 6702 6593 210 116 23 23 chr10 2727281 2727324 -137589441 + T-rich Low_complexity Low_complexity 5 47 0 187 54 54 0 chr10 2727485 2727522 -137589243 + (TA)n Simple_repeat Simple_repeat 1 39 0 282 157 58 25 chr10 2727702 2727888 -137588877 + (TA)n Simple_repeat Simple_repeat 1 192 0 1297 255 42 0 chr10 2728805 2729138 -137587627 + MER7A DNA MER2_type 1 345 -1 2293 219 16 66 chr10 2729223 2729651 -137587114 + MER82 DNA MER2_type 1 384 -269 2135 135 0 0 chr10 2729651 2729980 -137586785 + AluSx SINE Alu 1 312 0 2293 219 16 66 chr10 2729980 2730230 -137586535 + MER82 DNA MER2_type 384 645 -8 236 279 15 0 chr10 2730305 2730373 -137586392 + MER46C DNA MER2_type 261 329 -9 1397 279 143 20 chr10 2730870 2731612 -137585153 + MER97b DNA MER1_type? 4 836 -217 34 72 0 0 chr10 2731816 2731885 -137584880 + AT_rich Low_complexity Low_complexity 1 69 0 * 264 187 77 66 chr10 2731865 2731956 -137584809 + MER97a DNA MER1_type? 795 886 -8 276 186 114 0 chr10 2732949 2733019 -137583746 - MER116 DNA Mariner -2 78 1 1768 144 3 144 chr10 2733114 2733504 -137583261 - MER1B DNA MER1_type -2 335 1 527 304 126 34 chr10 2733901 2734284 -137582481 + L2 LINE L2 1520 1945 -1369 1464 237 62 27 chr10 2734284 2734735 -137582030 - MLT1C LTR MaLR 0 467 1 527 304 126 34 chr10 2734735 2734765 -137582000 + L2 LINE L2 1945 1971 -1343 861 234 7 57 chr10 2734769 2735051 -137581714 + MLT1B LTR MaLR 1 268 -122 302 277 66 7 chr10 2735051 2735188 -137581577 + L2 LINE L2 2332 2476 -838 1113 128 122 0 chr10 2735196 2735376 -137581389 - AluJb SINE Alu -25 287 86 339 330 130 15 chr10 2735477 2735870 -137580895 + L2 LINE L2 2622 3066 -247 2697 35 3 0 chr10 2738807 2739117 -137577648 - AluY SINE Alu 0 311 1 24 0 0 0 chr10 2739318 2739342 -137577423 + GC_rich Low_complexity Low_complexity 1 24 0 261 83 0 0 chr10 2739835 2739871 -137576894 + (TG)n Simple_repeat Simple_repeat 2 37 0 1988 239 54 25 chr10 2739934 2740600 -137576165 + L1MC/D LINE L1 3808 4492 -1654 1780 230 91 16 chr10 2740592 2741267 -137575498 + L1MC/D LINE L1 5082 5807 -435 * 212 313 48 36 chr10 2741398 2741481 -137575284 + L2 LINE L2 3146 3229 -43 225 240 0 0 chr10 2741639 2741714 -137575051 + (TA)n Simple_repeat Simple_repeat 1 75 0 659 126 14 28 chr10 2742391 2742534 -137574231 + GA-rich Low_complexity Low_complexity 4 144 0 630 266 123 64 chr10 2744950 2745447 -137571318 - MLT1H LTR MaLR 0 549 24 22 35 0 0 chr10 2747285 2747314 -137569451 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 2748407 2748439 -137568326 + AT_rich Low_complexity Low_complexity 1 32 0 1861 193 75 2 chr10 2748444 2748843 -137567922 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr10 2749379 2749409 -137567356 + AT_rich Low_complexity Low_complexity 1 30 0 1751 179 26 13 chr10 2749426 2749734 -137567031 + AluJo SINE Alu 1 312 0 2193 201 47 43 chr10 2749975 2750488 -137566277 - LTR40a LTR ERVL 0 519 5 1945 139 3 3 chr10 2750535 2750830 -137565935 - AluSx SINE Alu -17 295 1 299 304 13 0 chr10 2750837 2750916 -137565849 - L2 LINE L2 -17 3255 3176 264 350 53 0 chr10 2752176 2752382 -137564383 - LTR33 LTR ERVL 0 521 305 237 239 33 54 chr10 2753014 2753106 -137563659 - MER5B DNA MER1_type -12 166 77 1414 150 24 8 chr10 2754213 2754460 -137562305 + L1MA4 LINE L1 6042 6292 -8 21 36 0 0 chr10 2754999 2755027 -137561738 + AT_rich Low_complexity Low_complexity 1 28 0 5464 102 11 7 chr10 2756616 2757414 -137559351 - L1PA14 LINE L1 -123 6038 5237 1492 160 29 64 chr10 2758341 2758524 -137558241 - AluJb SINE Alu -10 302 133 2259 111 3 13 chr10 2758524 2758839 -137557926 - AluSx SINE Alu 0 312 1 1492 160 29 64 chr10 2758839 2758968 -137557797 - AluJb SINE Alu -179 133 1 200 244 90 13 chr10 2759252 2759330 -137557435 + MIR3 SINE MIR 121 204 -4 478 239 26 0 chr10 2759559 2759676 -137557089 + MER58B DNA MER1_type 222 341 0 407 351 52 0 chr10 2759867 2760041 -137556724 + MIR SINE MIR 74 256 -6 216 0 0 0 chr10 2760052 2760076 -137556689 + (CA)n Simple_repeat Simple_repeat 2 25 0 801 185 0 0 chr10 2761559 2761737 -137555028 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 733 317 16 12 chr10 2762325 2762568 -137554197 - MIR SINE MIR -3 259 16 230 227 41 21 chr10 2762668 2762765 -137554000 + (TA)n Simple_repeat Simple_repeat 1 99 0 255 31 0 0 chr10 2762906 2762938 -137553827 + (A)n Simple_repeat Simple_repeat 1 32 0 216 217 17 17 chr10 2764435 2764495 -137552270 + (CA)n Simple_repeat Simple_repeat 1 60 0 1848 141 0 0 chr10 2765000 2765262 -137551503 + AluSx SINE Alu 46 307 -5 183 80 0 0 chr10 2765287 2765312 -137551453 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2776 96 8 11 chr10 2767803 2768168 -137548597 - THE1B LTR MaLR 0 364 1 207 319 29 0 chr10 2768349 2768418 -137548347 + MIR SINE MIR 56 126 -136 30 27 0 0 chr10 2769303 2769340 -137547425 + AT_rich Low_complexity Low_complexity 1 37 0 222 313 36 12 chr10 2770521 2770604 -137546161 + MIR3 SINE MIR 15 99 -109 264 358 80 0 chr10 2771795 2771946 -137544819 + HERV16 LTR ERVL 1412 1574 -3422 1428 343 48 50 chr10 2772092 2773076 -137543689 + HERV16 LTR ERVL 2380 3091 -1905 189 180 0 0 chr10 2773737 2773787 -137542978 + A-rich Low_complexity Low_complexity 1 50 0 337 213 67 0 chr10 2775031 2775106 -137541659 + Tigger3(Golem) DNA MER2_type 1 80 -2949 483 229 38 0 chr10 2775235 2775340 -137541425 + Tigger3(Golem) DNA MER2_type 2921 3029 0 225 267 17 0 chr10 2776211 2776271 -137540494 + (TG)n Simple_repeat Simple_repeat 2 62 0 268 313 146 30 chr10 2776837 2777070 -137539695 + L3 LINE CR1 701 960 -617 486 206 199 0 chr10 2777429 2777560 -137539205 - MER45A DNA AcHobo -19 159 3 2719 207 51 3 chr10 2777709 2778302 -137538463 - L1MB3 LINE L1 -15 6168 5548 694 224 42 21 chr10 2778297 2778538 -137538227 - L1MB3 LINE L1 -3261 2885 2640 * 1236 217 44 0 chr10 2778561 2778833 -137537932 - L1M3 LINE L1 -624 6519 6236 * 4216 248 92 33 chr10 2778830 2781477 -137535288 - L1M3 LINE L1 -2105 5001 1977 1854 189 0 0 chr10 2781477 2781778 -137534987 - AluSx SINE Alu -6 306 6 4216 248 92 33 chr10 2781778 2782521 -137534244 - L1M3 LINE L1 -5129 1977 1279 273 309 16 16 chr10 2782915 2783038 -137533727 - L1M3 LINE L1 -6903 127 5 232 197 115 0 chr10 2783047 2783108 -137533657 + MLT1F LTR MaLR 475 542 0 2379 150 28 14 chr10 2783398 2783757 -137533008 - THE1B LTR MaLR 0 364 1 1262 181 110 13 chr10 2784365 2784689 -137532076 - Tigger1 DNA MER2_type 0 2418 1 2228 110 0 0 chr10 2786214 2786514 -137530251 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 2787811 2787843 -137528922 + AT_rich Low_complexity Low_complexity 1 32 0 348 248 8 56 chr10 2788088 2788213 -137528552 + MER58 DNA MER1_type 2301 2419 -1 2311 88 0 0 chr10 2788473 2788768 -137527997 + AluY SINE Alu 1 295 -16 207 273 0 0 chr10 2789249 2789293 -137527472 + MIR SINE MIR 219 262 0 22 56 0 0 chr10 2789753 2789789 -137526976 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 7 78 chr10 2789790 2790097 -137526668 - AluSg SINE Alu -25 285 1 819 127 32 16 chr10 2790208 2790334 -137526431 + L1PA8A LINE L1 6004 6131 0 416 106 0 30 chr10 2790359 2790425 -137526340 + L2 LINE L2 3250 3313 0 662 301 81 31 chr10 2791097 2791456 -137525309 + L1ME3A LINE L1 5740 6116 -54 334 279 99 83 chr10 2793322 2793805 -137522960 + MLT1H LTR MaLR 10 500 -49 226 228 110 118 chr10 2794033 2794169 -137522596 + MLT1I LTR MaLR 249 383 -26 1231 122 5 46 chr10 2794230 2794427 -137522338 - L1PA8A LINE L1 -2 6129 5941 2488 72 0 3 chr10 2794457 2794764 -137522001 + AluY SINE Alu 6 311 0 359 327 9 9 chr10 2794767 2794874 -137521891 - MIR SINE MIR -141 121 15 255 103 0 0 chr10 2795383 2795422 -137521343 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 321 243 157 29 chr10 2796225 2796365 -137520400 - L2 LINE L2 -4 3309 3152 2166 96 4 0 chr10 2796386 2796666 -137520099 - AluSc SINE Alu -28 281 1 4789 85 2 0 chr10 2797200 2797800 -137518965 - L1PA8 LINE L1 0 6172 5572 273 233 80 20 chr10 2798702 2798817 -137517948 + MLT1J LTR MaLR 46 181 -290 324 333 81 38 chr10 2799078 2799144 -137517621 + L1ME3A LINE L1 5680 5742 -428 2077 130 10 0 chr10 2799144 2799443 -137517322 + AluSg SINE Alu 5 306 -4 324 333 81 38 chr10 2799443 2799637 -137517128 + L1ME3A LINE L1 5742 5951 -219 1568 204 68 19 chr10 2799651 2800018 -137516747 - MLT1B LTR MaLR -2 388 4 900 124 49 27 chr10 2900230 2900455 -137416310 + AluY SINE Alu 81 310 -1 180 111 0 0 chr10 2900999 2901026 -137415739 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2219 223 43 8 chr10 2902469 2902976 -137413789 - MER74A LTR ERVL 0 558 34 2050 98 3 57 chr10 2903346 2903662 -137413103 + AluSg SINE Alu 1 299 -11 4480 207 44 27 chr10 2904335 2904482 -137412283 - L1MB7 LINE L1 -9 6175 6032 2352 81 0 0 chr10 2904482 2904790 -137411975 + AluY SINE Alu 1 308 -3 4480 207 44 27 chr10 2904790 2906566 -137410199 - L1MB7 LINE L1 -152 6032 4219 343 308 39 0 chr10 2906581 2906711 -137410054 - MIR SINE MIR -6 256 122 875 240 56 65 chr10 2907719 2908248 -137408517 + MLT1E LTR MaLR 21 593 0 270 0 0 0 chr10 2908395 2908425 -137408340 + (A)n Simple_repeat Simple_repeat 1 30 0 234 263 0 0 chr10 2908745 2908802 -137407963 + (CA)n Simple_repeat Simple_repeat 1 57 0 297 276 162 17 chr10 2909300 2909448 -137407317 - MER5A DNA MER1_type -5 184 7 1211 223 51 3 chr10 2910657 2910832 -137405933 - AluJb SINE Alu -5 307 111 270 0 0 0 chr10 2910832 2910862 -137405903 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1211 223 51 3 chr10 2910862 2910978 -137405787 - AluJb SINE Alu -201 111 2 1740 170 10 0 chr10 2911170 2911470 -137405295 - AluJo SINE Alu -9 303 1 867 157 4 6 chr10 2912332 2913053 -137403712 + (CTCA)n Simple_repeat Simple_repeat 1 720 0 922 163 3 12 chr10 2913073 2913110 -137403655 + (CTCA)n Simple_repeat Simple_repeat 1 37 -1675 6122 114 25 28 chr10 2913110 2914082 -137402683 + LTR5 LTR ERVK 1 969 0 922 163 3 12 chr10 2914082 2914801 -137401964 + (CTCA)n Simple_repeat Simple_repeat 37 1712 0 237 337 116 35 chr10 2914802 2915173 -137401592 - L2 LINE L2 -1 3312 2912 207 310 14 0 chr10 2915629 2915700 -137401065 + MIR SINE MIR 158 229 -33 1942 138 50 44 chr10 2916080 2916442 -137400323 + THE1B LTR MaLR 1 364 0 335 215 223 8 chr10 2916629 2916759 -137400006 + MER104 DNA Tc2 18 175 -5 2000 115 3 16 chr10 2916818 2917131 -137399634 + AluSp SINE Alu 1 309 -4 293 246 125 82 chr10 2917397 2917629 -137399136 - L1ME LINE L1 -315 5855 5614 268 278 90 21 chr10 2918192 2918336 -137398429 - L1MEd LINE L1 -5961 158 5 1846 147 0 28 chr10 2918437 2918757 -137398008 + AluSx SINE Alu 1 311 -1 810 184 0 0 chr10 2920092 2920271 -137396494 + GA-rich Low_complexity Low_complexity 1 179 0 662 268 45 15 chr10 2920931 2921129 -137395636 + MER20 DNA MER1_type 16 219 0 1938 99 50 7 chr10 2921460 2921743 -137395022 - AluSx SINE Alu -17 295 1 3676 25 0 7 chr10 2922478 2922912 -137393853 - L1PA5 LINE L1 0 6154 5724 297 83 0 33 chr10 2923130 2923190 -137393575 - L1MA4A LINE L1 -1 6302 6245 227 231 46 0 chr10 2923199 2923264 -137393501 - L1MB4 LINE L1 -2 6178 6111 1293 219 77 41 chr10 2923298 2923417 -137393348 - L1MA4 LINE L1 -294 6006 5893 2055 98 3 7 chr10 2923417 2923714 -137393051 - AluSq SINE Alu -13 300 5 1293 219 77 41 chr10 2923714 2923982 -137392783 - L1MA4 LINE L1 -407 5893 5605 711 158 29 53 chr10 2923981 2924137 -137392628 - L1MA4 LINE L1 -44 6256 6105 * 215 211 21 42 chr10 2924140 2924235 -137392530 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 1266 165 29 98 chr10 2924250 2924596 -137392169 - L1MA4 LINE L1 -192 6108 5787 484 194 43 0 chr10 2924596 2924703 -137392062 + L1ME LINE L1 5724 5834 -287 1446 152 115 0 chr10 2926018 2926287 -137390478 + AluSx SINE Alu 2 301 -11 590 132 0 0 chr10 2927761 2927852 -137388913 + AluSg/x SINE Alu 217 307 -2 1785 175 62 73 chr10 2927879 2928318 -137388447 + Tigger2a DNA MER2_type 1 434 0 243 0 0 0 chr10 2928763 2928790 -137387975 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 235 0 10 chr10 2928791 2928889 -137387876 + GA-rich Low_complexity Low_complexity 2 98 0 294 239 0 0 chr10 2928908 2929021 -137387744 + GA-rich Low_complexity Low_complexity 2 114 0 1809 196 38 30 chr10 2929466 2929598 -137387167 + MSTD LTR MaLR 1 130 -266 2302 93 0 3 chr10 2929598 2929910 -137386855 - AluY SINE Alu 0 311 1 1809 196 38 30 chr10 2929910 2930170 -137386595 + MSTD LTR MaLR 130 396 0 857 297 26 62 chr10 2930946 2931438 -137385327 + MLT1J LTR MaLR 1 511 0 234 263 53 13 chr10 2931510 2931586 -137385179 - MIR3 SINE MIR -23 185 107 1215 126 16 11 chr10 2931606 2931796 -137384969 - MER4C LTR ERV1 0 465 275 213 282 0 0 chr10 2931852 2932026 -137384739 + G-rich Low_complexity Low_complexity 5 178 0 1739 147 47 13 chr10 2932070 2932369 -137384396 - MER4C LTR ERV1 -156 309 1 2411 86 28 81 chr10 2933429 2933826 -137382939 + MER51B LTR ERV1 2 377 0 2428 83 3 10 chr10 2933856 2934169 -137382596 - AluY SINE Alu 0 311 1 298 274 53 26 chr10 2935753 2935866 -137380899 - MER112 DNA MER1_type -58 202 87 2211 136 0 0 chr10 2936458 2936759 -137380006 + AluSx SINE Alu 1 304 -8 351 0 0 0 chr10 2936759 2936798 -137379967 + (TA)n Simple_repeat Simple_repeat 2 40 0 2043 140 0 7 chr10 2936821 2937107 -137379658 - AluJo SINE Alu -26 286 3 2079 120 3 0 chr10 2937867 2938150 -137378615 + AluSq SINE Alu 1 284 -29 2084 276 82 47 chr10 2938524 2938947 -137377818 - L1ME1 LINE L1 -5 6161 5754 3804 50 2 4 chr10 2938947 2939443 -137377322 + L1PA3 LINE L1 5660 6154 -1 2084 276 82 47 chr10 2939443 2939485 -137377280 - L1ME1 LINE L1 -412 5754 5715 1751 157 0 83 chr10 2939485 2939823 -137376942 - AluJo SINE Alu 0 312 3 2084 276 82 47 chr10 2939823 2940487 -137376278 - L1ME1 LINE L1 -451 5715 5076 2409 61 6 52 chr10 2940487 2940813 -137375952 - AluY SINE Alu 0 311 1 1187 55 0 22 chr10 2940816 2940997 -137375768 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 2084 276 82 47 chr10 2940997 2941279 -137375486 - L1ME1 LINE L1 -1091 5075 4693 549 170 9 9 chr10 2941374 2941480 -137375285 - AluSp/q SINE Alu 0 313 208 784 159 0 0 chr10 2942297 2942429 -137374336 + FLAM_C SINE Alu 1 132 -1 198 305 179 13 chr10 2943218 2943369 -137373396 - MIR SINE MIR -1 261 86 1559 173 41 11 chr10 2943455 2943595 -137373170 - AluJo SINE Alu -38 274 140 243 0 0 0 chr10 2943595 2943622 -137373143 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1559 173 41 11 chr10 2943622 2943747 -137373018 - AluJo SINE Alu -172 140 1 207 0 0 0 chr10 2944066 2944089 -137372676 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 2944124 2944158 -137372607 + (T)n Simple_repeat Simple_repeat 1 34 0 186 277 84 0 chr10 2944582 2944665 -137372100 - MIR SINE MIR -113 149 60 197 304 51 0 chr10 2944698 2944777 -137371988 + L2 LINE L2 3179 3261 -11 1963 133 3 11 chr10 2946526 2946839 -137369926 - AluSx SINE Alu 0 311 1 181 219 94 0 chr10 2947087 2947151 -137369614 - L2 LINE L2 -516 2798 2729 183 80 0 0 chr10 2947180 2947205 -137369560 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3420 114 8 4 chr10 2947517 2948026 -137368739 - MER9 LTR ERVK 0 511 1 225 196 0 0 chr10 2948246 2948292 -137368473 - Charlie5 DNA MER1_type -17 2595 2550 1825 169 3 10 chr10 2948319 2948621 -137368144 + AluJo SINE Alu 3 302 -10 1052 25 0 0 chr10 2948624 2948744 -137368021 + AluYb8 SINE Alu 199 318 0 293 262 79 0 chr10 2948769 2948895 -137367870 - Charlie5 DNA MER1_type -114 2498 2363 351 249 66 95 chr10 2949092 2949441 -137367324 + L2 LINE L2 2951 3289 -24 2523 76 0 19 chr10 2949947 2950262 -137366503 - AluSc SINE Alu 0 309 1 196 333 40 30 chr10 2951319 2951418 -137365347 + MIR SINE MIR 34 133 -129 227 216 162 0 chr10 2951666 2951740 -137365025 + MER5A DNA MER1_type 42 127 -62 2584 55 0 0 chr10 2951938 2952230 -137364535 - AluY SINE Alu -19 292 1 1290 266 130 40 chr10 2953476 2954333 -137362432 + L1ME1 LINE L1 5214 6150 -16 1542 109 0 0 chr10 2954590 2954792 -137361973 - AluY SINE Alu 0 311 110 1853 154 3 39 chr10 2956192 2956503 -137360262 + AluJb SINE Alu 1 300 -12 181 289 52 31 chr10 2961836 2961933 -137354832 + MIR SINE MIR 152 250 -12 427 263 143 19 chr10 2962830 2963039 -137353726 - MIR SINE MIR -19 243 9 21 36 0 0 chr10 2963525 2963553 -137353212 + AT_rich Low_complexity Low_complexity 1 28 0 1849 182 3 6 chr10 2963564 2963877 -137352888 - AluJo SINE Alu 0 312 1 1696 159 32 0 chr10 2967178 2967455 -137349310 + AluJo SINE Alu 16 301 -11 979 202 214 9 chr10 2967964 2968399 -137348366 + Tigger7 DNA MER2_type 1 2479 -8 738 148 42 7 chr10 2968571 2968713 -137348052 + AluJb SINE Alu 136 282 -30 222 128 0 0 chr10 2968731 2968770 -137347995 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 2169 98 0 4 chr10 2972138 2972413 -137344352 - AluSc SINE Alu -35 274 1 337 276 45 45 chr10 2973519 2973675 -137343090 + L1M4 LINE L1 3691 3846 -2300 190 284 74 21 chr10 2974329 2974424 -137342341 + MIR3 SINE MIR 9 108 -100 2138 129 0 0 chr10 2974666 2974953 -137341812 + AluSx SINE Alu 1 287 -25 1301 176 38 31 chr10 2975322 2975583 -137341182 + Tigger7 DNA MER2_type 5 267 -466 316 261 11 11 chr10 2975580 2975672 -137341093 + Tigger7 DNA MER2_type 2388 2479 -8 * 242 240 0 0 chr10 2976035 2976085 -137340680 - L2 LINE L2 -2 3270 3221 2306 110 0 7 chr10 2976638 2976946 -137339819 + AluSx SINE Alu 1 306 -6 775 194 203 13 chr10 2977022 2977254 -137339511 - Tigger3(Golem) DNA MER2_type 0 3038 2763 36 62 0 0 chr10 2977271 2977335 -137339430 + AT_rich Low_complexity Low_complexity 1 64 0 289 159 286 0 chr10 2977351 2977414 -137339351 - Tigger3(Golem) DNA MER2_type -2947 82 2 2260 97 10 0 chr10 2977541 2977830 -137338935 + AluSg SINE Alu 2 293 -17 225 90 15 134 chr10 2979557 2979624 -137337141 + MLT1E2 LTR MaLR 2 60 -566 373 241 77 65 chr10 2980096 2980266 -137336499 + L2 LINE L2 3095 3266 -6 248 351 38 5 chr10 2984142 2984353 -137332412 + MER46C DNA MER2_type 121 338 0 417 295 74 0 chr10 2985417 2985607 -137331158 - MER20 DNA MER1_type 0 219 16 1868 161 3 19 chr10 2986280 2986597 -137330168 + AluJb SINE Alu 1 312 0 1094 161 0 0 chr10 2987578 2987746 -137329019 + AluJb SINE Alu 134 301 -11 2498 77 3 0 chr10 2989006 2989316 -137327449 - AluSx SINE Alu -1 311 1 530 154 11 0 chr10 2990343 2990434 -137326331 - AluSc SINE Alu -213 96 5 396 299 62 14 chr10 2992765 2992976 -137323789 + L2 LINE L2 2050 2270 -1044 440 297 175 25 chr10 2993464 2993818 -137322947 + L2 LINE L2 2396 2802 -512 207 271 66 74 chr10 2994077 2994175 -137322590 + L2 LINE L2 3182 3280 -33 2391 101 0 0 chr10 2994175 2994472 -137322293 + AluSx SINE Alu 1 297 -15 207 271 66 74 chr10 2994472 2994495 -137322270 + L2 LINE L2 3280 3302 -11 343 280 136 0 chr10 2994580 2994705 -137322060 + MIR SINE MIR 111 252 -10 1470 127 0 51 chr10 2995763 2995999 -137320766 + AluSx SINE Alu 7 230 -82 362 322 96 0 chr10 2996953 2997099 -137319666 + MIR SINE MIR 87 246 -16 368 309 3 3 chr10 2997266 2997639 -137319126 + (CA)n Simple_repeat Simple_repeat 1 373 0 275 258 12 12 chr10 2997657 2997820 -137318945 + (CA)n Simple_repeat Simple_repeat 2 164 0 261 219 0 0 chr10 2997910 2997983 -137318782 + (CA)n Simple_repeat Simple_repeat 2 74 0 2261 74 7 58 chr10 2998138 2998447 -137318318 + AluY SINE Alu 1 293 -18 250 339 17 17 chr10 3000415 3000533 -137316232 + MIR3 SINE MIR 86 203 -5 590 239 3 43 chr10 3001641 3001994 -137314771 + G-rich Low_complexity Low_complexity 1 338 0 222 301 0 46 chr10 3002006 3002159 -137314606 + (CTAGGG)n Simple_repeat Simple_repeat 1 146 0 218 295 0 39 chr10 3002661 3002739 -137314026 + G-rich Low_complexity Low_complexity 1 75 0 1581 160 82 7 chr10 3005589 3005871 -137310894 - AluJo SINE Alu -9 303 1 1910 92 0 82 chr10 3006539 3006842 -137309923 + AluSx SINE Alu 35 312 0 180 0 0 0 chr10 3007835 3007855 -137308910 + (T)n Simple_repeat Simple_repeat 1 20 0 308 64 21 0 chr10 3008633 3008680 -137308085 + (CA)n Simple_repeat Simple_repeat 1 48 0 2312 100 0 0 chr10 3009748 3010037 -137306728 - AluSg SINE Alu -21 289 1 28 0 0 0 chr10 3011467 3011495 -137305270 + GC_rich Low_complexity Low_complexity 1 28 0 216 170 0 0 chr10 3011543 3011596 -137305169 + G-rich Low_complexity Low_complexity 6 58 0 306 342 17 8 chr10 3013527 3013647 -137303118 + MIR SINE MIR 30 150 -112 189 263 105 75 chr10 3013732 3013865 -137302900 - MIR SINE MIR -55 207 71 197 319 71 26 chr10 3014445 3014558 -137302207 - L2 LINE L2 -36 3236 3119 181 320 39 0 chr10 3014681 3014759 -137302006 - MIR SINE MIR -130 132 52 453 309 17 33 chr10 3014773 3014954 -137301811 + MIR SINE MIR 58 235 -27 1662 102 26 4 chr10 3016718 3016944 -137299821 - AluSg/x SINE Alu -9 303 73 1956 182 5 16 chr10 3016982 3017351 -137299414 + MLT1A1 LTR MaLR 1 365 0 355 275 132 18 chr10 3017451 3017618 -137299147 + MER5A DNA MER1_type 1 186 -3 1007 218 34 103 chr10 3018140 3018520 -137298245 + MLT1J LTR MaLR 1 354 -157 187 405 56 8 chr10 3018589 3018715 -137298050 - L2 LINE L2 -25 3247 3116 1167 281 49 85 chr10 3018931 3019753 -137297012 + L1MC5 LINE L1 6730 7521 -440 24 32 0 0 chr10 3021727 3021758 -137295007 + AT_rich Low_complexity Low_complexity 1 31 0 335 327 65 0 chr10 3021827 3022041 -137294724 + L1MC/D LINE L1 5576 5803 -2005 1939 158 14 0 chr10 3022279 3022576 -137294189 + AluSx SINE Alu 1 301 -11 2300 110 7 0 chr10 3022965 3023266 -137293499 + AluSc SINE Alu 1 303 -6 983 243 156 30 chr10 3023754 3024055 -137292710 + MLT2C1 LTR ERVL 1 339 -58 377 70 18 0 chr10 3024055 3024112 -137292653 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 709 265 12 0 chr10 3024114 3024284 -137292481 - ERVL LTR ERVL -5104 660 489 1707 253 48 14 chr10 3024307 3024460 -137292305 + ERVL-C1 LTR ERVL 252 398 -5366 2342 68 0 4 chr10 3024460 3024739 -137292026 - AluY SINE Alu -10 301 24 1707 253 48 14 chr10 3024739 3025024 -137291741 + ERVL-C1 LTR ERVL 398 705 -5059 331 352 31 48 chr10 3025135 3025487 -137291278 + ERVL LTR ERVL 4908 5253 -511 512 278 73 20 chr10 3025810 3026055 -137290710 + LTR16C LTR ERVL 232 489 -2 210 222 37 19 chr10 3026551 3026605 -137290160 - MIR SINE MIR -102 160 106 1895 146 0 0 chr10 3027850 3028118 -137288647 + AluSx SINE Alu 27 294 -18 205 132 57 19 chr10 3028150 3028203 -137288562 + T-rich Low_complexity Low_complexity 4 58 0 4352 96 3 0 chr10 3028224 3028840 -137287925 - L1PA10 LINE L1 -11 6157 5540 599 317 77 35 chr10 3029213 3029588 -137287177 - MLT1L LTR MaLR -224 391 1 2585 74 0 0 chr10 3029817 3030127 -137286638 - AluY SINE Alu -1 310 1 3512 211 45 22 chr10 3031351 3031700 -137285065 - L1MB3 LINE L1 -2 6181 5842 2640 52 0 3 chr10 3031700 3032008 -137284757 - AluY SINE Alu -4 307 1 3512 211 45 22 chr10 3032008 3032526 -137284239 - L1MB3 LINE L1 -341 5842 5294 1614 200 43 3 chr10 3032566 3032866 -137283899 + AluJo SINE Alu 1 312 0 2346 174 12 7 chr10 3032892 3033316 -137283449 + MSTB LTR MaLR 1 426 0 191 284 37 25 chr10 3033690 3033771 -137282994 - MIR SINE MIR -153 109 28 975 259 34 39 chr10 3033865 3034220 -137282545 - MLT2D LTR ERVL 0 414 62 316 309 32 42 chr10 3034572 3034789 -137281976 - L2 LINE L2 -5 3308 3094 265 93 481 0 chr10 3034911 3034965 -137281800 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 3035768 3035789 -137280976 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr10 3036259 3036290 -137280475 + (GA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 3036536 3036565 -137280200 + AT_rich Low_complexity Low_complexity 1 29 0 5910 140 32 1 chr10 3036713 3037890 -137278875 + L1PB2 LINE L1 4936 6149 -2 22 0 0 0 chr10 3038084 3038106 -137278659 + AT_rich Low_complexity Low_complexity 1 22 0 249 298 81 32 chr10 3038673 3038797 -137277968 - MIR SINE MIR -113 149 20 2304 105 0 7 chr10 3038849 3039153 -137277612 + AluSx SINE Alu 11 312 0 330 312 16 16 chr10 3039283 3039408 -137277357 + MIR SINE MIR 119 243 -19 23 0 0 0 chr10 3040218 3040241 -137276524 + AT_rich Low_complexity Low_complexity 1 23 0 2422 104 28 8 chr10 3040532 3040889 -137275876 - THE1B LTR MaLR 0 364 1 1498 179 42 28 chr10 3042161 3042518 -137274247 + L1MA4A LINE L1 5941 6302 -1 2583 60 0 0 chr10 3043472 3043773 -137272992 - AluY SINE Alu -7 304 4 563 291 86 42 chr10 3045199 3045608 -137271157 - MARNA DNA Mariner -134 452 26 2531 63 0 0 chr10 3046630 3046933 -137269832 + AluY SINE Alu 1 303 -8 408 252 26 43 chr10 3097642 3097757 -137219008 - L1MC4 LINE L1 -1340 6702 6590 300 271 83 10 chr10 3097681 3097777 -137218988 + L1MC3 LINE L1 6571 6673 -1112 * 1189 213 0 0 chr10 3099163 3099393 -137217372 - Tigger5 DNA MER2_type 0 2323 2094 1938 155 7 3 chr10 3100437 3100734 -137216031 - AluJo SINE Alu -14 298 1 498 226 88 13 chr10 3101434 3101582 -137215183 + MLT1B LTR MaLR 2 164 -226 1866 85 0 0 chr10 3101582 3101817 -137214948 + AluSc SINE Alu 67 301 -8 406 211 11 0 chr10 3101876 3102051 -137214714 + CT-rich Low_complexity Low_complexity 2 178 0 * 664 102 0 75 chr10 3102017 3102204 -137214561 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 829 213 6 0 chr10 3102237 3102406 -137214359 + MLT1B LTR MaLR 205 374 -16 279 365 171 0 chr10 3103780 3103991 -137212774 + MIR SINE MIR 16 262 0 2472 96 0 6 chr10 3104317 3104629 -137212136 - AluSq SINE Alu 0 313 4 279 53 0 26 chr10 3105027 3105065 -137211700 - L2 LINE L2 -15 3298 3262 255 154 0 0 chr10 3105032 3105071 -137211694 - MIR SINE MIR -13 249 211 * 1355 37 0 0 chr10 3105263 3105425 -137211340 - L1PA5 LINE L1 -2 6152 5991 215 31 31 0 chr10 3107254 3107286 -137209479 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 3107348 3107370 -137209395 + AT_rich Low_complexity Low_complexity 1 22 0 836 161 0 0 chr10 3107370 3107494 -137209271 - AluJb SINE Alu -188 124 1 813 158 68 6 chr10 3107497 3107674 -137209091 - L1MB3 LINE L1 -45 6138 5951 257 276 0 0 chr10 3108293 3108351 -137208414 + (CA)n Simple_repeat Simple_repeat 1 58 0 500 243 112 67 chr10 3108517 3108830 -137207935 + HAL1b LINE L1 554 880 -468 2193 112 0 10 chr10 3108853 3109165 -137207600 + AluSc SINE Alu 1 309 0 21 0 0 0 chr10 3109230 3109251 -137207514 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 0 3 chr10 3109259 3109567 -137207198 + AluSx SINE Alu 1 307 -5 1119 114 16 22 chr10 3109672 3109856 -137206909 - MER30B DNA MER1_type -7 183 1 1665 157 54 0 chr10 3110466 3110637 -137206128 - AluJb SINE Alu -4 308 115 266 0 0 29 chr10 3110637 3110672 -137206093 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1665 157 54 0 chr10 3110672 3110780 -137205985 - AluJb SINE Alu -197 115 14 1260 94 0 0 chr10 3111000 3111292 -137205473 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 1234 116 0 9 chr10 3111305 3111665 -137205100 + (TCCA)n Simple_repeat Simple_repeat 1 536 0 306 0 0 0 chr10 3111665 3111699 -137205066 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 835 144 34 0 chr10 3111699 3111845 -137204920 - L1MA9 LINE L1 0 6312 6162 395 152 29 0 chr10 3113738 3113843 -137202922 + (CACCAT)n Simple_repeat Simple_repeat 3 110 0 274 212 25 0 chr10 3113895 3114013 -137202752 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 228 325 0 0 chr10 3114030 3114113 -137202652 + (CAT)n Simple_repeat Simple_repeat 2 84 0 738 123 9 0 chr10 3114113 3114227 -137202538 - THE1C LTR MaLR 0 375 261 465 174 26 19 chr10 3116435 3116590 -137200175 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 367 255 0 22 chr10 3116640 3116747 -137200018 + (ATGGTG)n Simple_repeat Simple_repeat 1 109 -450 1807 133 63 84 chr10 3116747 3117129 -137199636 + THE1C LTR MaLR 2 375 0 367 255 0 22 chr10 3117129 3117212 -137199553 + (ATGGTG)n Simple_repeat Simple_repeat 109 559 0 274 212 25 0 chr10 3117229 3117347 -137199418 + (ATGGTG)n Simple_repeat Simple_repeat 2 122 0 395 152 29 0 chr10 3117399 3117504 -137199261 + (ATGGTG)n Simple_repeat Simple_repeat 3 110 0 189 297 78 0 chr10 3118070 3118134 -137198631 - MIR SINE MIR -96 166 98 32 26 0 0 chr10 3118379 3118418 -137198347 + AT_rich Low_complexity Low_complexity 1 39 0 2478 85 0 3 chr10 3118643 3118950 -137197815 + AluSx SINE Alu 1 306 -6 313 203 63 76 chr10 3119848 3120006 -137196759 - L1MC5 LINE L1 -48 7913 7758 2094 132 0 0 chr10 3120260 3120573 -137196192 + AluSx SINE Alu 1 313 0 231 271 0 17 chr10 3120730 3120789 -137195976 - L2 LINE L2 -2 3270 3213 211 312 104 24 chr10 3122074 3122199 -137194566 - L2 LINE L2 -41 3231 3097 256 324 128 0 chr10 3122236 3122338 -137194427 - MIR SINE MIR -74 188 74 303 296 55 78 chr10 3123097 3123354 -137193411 + L1ME4a LINE L1 5839 6089 -32 267 330 78 0 chr10 3124578 3124681 -137192084 - MIR3 SINE MIR -5 203 93 2180 100 4 0 chr10 3126129 3126410 -137190355 - AluSg SINE Alu -12 298 17 808 139 29 40 chr10 3126617 3126790 -137189975 + MER53 DNA DNA 1 171 -18 2254 86 38 3 chr10 3127397 3127689 -137189076 + AluY SINE Alu 1 302 -9 435 248 62 25 chr10 3127701 3127862 -137188903 - MER96B DNA MER1_type? -151 266 100 22 0 0 0 chr10 3129944 3129966 -137186799 + AT_rich Low_complexity Low_complexity 1 22 0 358 289 58 16 chr10 3131145 3131266 -137185499 - MIR SINE MIR -116 146 21 2307 89 7 3 chr10 3131750 3132043 -137184722 + AluSp SINE Alu 1 294 -19 302 304 9 18 chr10 3132772 3132884 -137183881 + (CA)n Simple_repeat Simple_repeat 2 112 0 510 168 23 12 chr10 3133136 3133309 -137183456 + (TG)n Simple_repeat Simple_repeat 1 175 0 499 151 29 17 chr10 3133362 3133534 -137183231 + (TG)n Simple_repeat Simple_repeat 1 174 0 616 167 27 6 chr10 3133606 3133944 -137182821 + (TG)n Simple_repeat Simple_repeat 1 345 0 1102 117 43 0 chr10 3134512 3134675 -137182090 + AluSc SINE Alu 129 298 -11 207 324 15 0 chr10 3136993 3137061 -137179704 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2075 121 0 0 chr10 3137911 3138208 -137178557 + AluSx SINE Alu 1 297 -15 1598 197 0 10 chr10 3138818 3139128 -137177637 + AluJb SINE Alu 1 307 -5 2219 71 0 17 chr10 3141473 3141769 -137174996 + AluY SINE Alu 7 297 -14 310 362 29 49 chr10 3142879 3143122 -137173643 - MIR SINE MIR -10 252 15 200 167 0 0 chr10 3144460 3144490 -137172275 + polypurine Low_complexity Low_complexity 3 32 0 327 272 76 11 chr10 3144663 3144755 -137172010 + MIR SINE MIR 13 110 -152 1467 181 38 2 chr10 3144798 3145169 -137171596 - MER65A LTR ERV1 0 445 4 217 323 15 0 chr10 3145169 3145234 -137171531 + MIR SINE MIR 162 227 -35 552 287 184 17 chr10 3145377 3145725 -137171040 + MLT1J LTR MaLR 104 509 -2 600 227 41 23 chr10 3146138 3146310 -137170455 + MER5B DNA MER1_type 1 175 -3 315 179 269 0 chr10 3146327 3146405 -137170360 + MER5A DNA MER1_type 8 106 -83 263 300 50 0 chr10 3147645 3147725 -137169040 - L2 LINE L2 0 3313 3230 2086 184 21 7 chr10 3147982 3148412 -137168353 + L1MB3 LINE L1 5746 6181 -2 203 77 0 26 chr10 3148455 3148494 -137168271 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1508 149 3 73 chr10 3148497 3148799 -137167966 - AluJo SINE Alu -31 281 1 394 222 176 0 chr10 3149156 3149264 -137167501 - FLAM_C SINE Alu -1 132 6 215 31 31 0 chr10 3149764 3149796 -137166969 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1848 137 7 3 chr10 3150162 3150454 -137166311 + AluSx SINE Alu 1 293 -19 247 224 60 30 chr10 3150843 3150910 -137165855 + L2 LINE L2 3204 3272 0 1333 235 30 12 chr10 3151018 3151367 -137165398 - MLT1A1 LTR MaLR -6 359 1 2117 107 3 0 chr10 3151441 3151730 -137165035 - AluSx SINE Alu -21 291 2 3259 103 50 57 chr10 3155648 3156248 -137160517 - MER4A LTR ERV1 0 600 5 583 111 0 0 chr10 3156944 3157034 -137159731 - HERVFH19I LTR ERV1 -3634 4085 3996 529 335 44 7 chr10 3157073 3157366 -137159399 - L2 LINE L2 -1226 2088 1785 278 213 50 106 chr10 3157376 3157536 -137159229 - MLT1J1 LTR MaLR -3 443 293 261 233 17 0 chr10 3157655 3157715 -137159050 - MLT1J2 LTR MaLR -321 129 69 1115 235 44 65 chr10 3157735 3158193 -137158572 + MLT2B1 LTR ERVL 2 458 -6 186 261 81 45 chr10 3158243 3158354 -137158411 - L2 LINE L2 -1559 1755 1641 194 311 126 24 chr10 3158386 3158592 -137158173 - L2 LINE L2 -1669 1645 1419 781 156 0 0 chr10 3158837 3158995 -137157770 - FRAM SINE Alu 0 183 26 284 250 60 24 chr10 3160513 3160597 -137156168 + MARNA DNA Mariner 44 130 -456 2034 103 21 0 chr10 3160649 3160930 -137155835 - AluSx SINE Alu -3 309 23 253 145 43 43 chr10 3160959 3161028 -137155737 - MARNA DNA Mariner -234 352 284 390 69 0 0 chr10 3161065 3161123 -137155642 + (TG)n Simple_repeat Simple_repeat 1 58 0 3062 217 63 25 chr10 3161728 3162810 -137153955 + L1MD2 LINE L1 4906 6032 -327 1564 245 24 37 chr10 3162817 3163282 -137153483 - MLT1C LTR MaLR -1 466 8 525 261 20 7 chr10 3163386 3163539 -137153226 + L1MD2 LINE L1 6195 6349 -10 196 236 36 18 chr10 3165665 3165720 -137151045 - L2 LINE L2 -11 3302 3247 783 134 7 13 chr10 3165884 3166033 -137150732 + (TTCC)n Simple_repeat Simple_repeat 1 148 0 1544 168 13 42 chr10 3166033 3166343 -137150422 - AluJo SINE Alu -5 307 7 1014 106 99 0 chr10 3166369 3166520 -137150245 + AluSg/x SINE Alu 135 300 -12 588 309 55 4 chr10 3166997 3167233 -137149532 - MLT1H LTR MaLR -222 327 80 192 266 0 119 chr10 3167311 3167420 -137149345 - MIR SINE MIR -79 183 88 21 36 0 0 chr10 3167740 3167768 -137148997 + AT_rich Low_complexity Low_complexity 1 28 0 2053 122 3 0 chr10 3167769 3168065 -137148700 + AluSq SINE Alu 1 297 -16 350 324 19 69 chr10 3168206 3168422 -137148343 + L1ME LINE L1 5264 5468 -2340 275 277 99 45 chr10 3170528 3170730 -137146035 - MER112 DNA MER1_type -6 254 42 1856 160 0 6 chr10 3170829 3171141 -137145624 + AluSx SINE Alu 1 310 -2 38 22 0 0 chr10 3171162 3171207 -137145558 + AT_rich Low_complexity Low_complexity 1 45 0 245 164 0 18 chr10 3171262 3171317 -137145448 + CT-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr10 3171322 3171348 -137145417 + AT_rich Low_complexity Low_complexity 1 26 0 243 222 173 49 chr10 3173221 3173302 -137143463 - MIR SINE MIR -48 214 124 2100 103 0 7 chr10 3173304 3173616 -137143149 + AluSx SINE Alu 1 310 0 2142 82 3 7 chr10 3176448 3176739 -137140026 - AluY SINE Alu -21 290 1 924 200 44 9 chr10 3176740 3176965 -137139800 + AluJo SINE Alu 59 291 -21 409 238 153 26 chr10 3177000 3177189 -137139576 + L1ME LINE L1 5573 5785 -336 585 163 65 8 chr10 3177802 3177925 -137138840 + FLAM_C SINE Alu 2 131 -12 320 203 27 0 chr10 3177933 3178007 -137138758 - L1MC2 LINE L1 -4 6340 6265 420 111 0 0 chr10 3178462 3178525 -137138240 + (TG)n Simple_repeat Simple_repeat 1 63 0 819 278 14 0 chr10 3179679 3179902 -137136863 + MLT1B LTR MaLR 8 233 -157 264 263 11 63 chr10 3180006 3180101 -137136664 - MER45A DNA AcHobo -50 128 39 819 207 6 11 chr10 3180127 3180301 -137136464 - AluJb SINE Alu 0 312 140 492 336 77 17 chr10 3180311 3180824 -137135941 + L2 LINE L2 2694 3305 -8 436 316 123 0 chr10 3182109 3182139 -137134626 + MIR SINE MIR 6 31 -231 2188 99 17 3 chr10 3182139 3182441 -137134324 + AluSg SINE Alu 1 306 -4 436 316 123 0 chr10 3182441 3182581 -137134184 + MIR SINE MIR 31 197 -65 281 243 9 75 chr10 3182946 3183053 -137133712 - MIR SINE MIR -55 207 108 279 0 0 0 chr10 3183225 3183256 -137133509 + (TG)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr10 3183667 3183688 -137133077 + (T)n Simple_repeat Simple_repeat 1 21 0 1882 133 0 13 chr10 3185409 3185718 -137131047 + AluSx SINE Alu 1 305 -7 1810 120 31 47 chr10 3186826 3187143 -137129622 - AluSx SINE Alu 0 312 1 698 223 171 0 chr10 3187378 3187571 -137129194 + L1PA16 LINE L1 5930 6155 -11 2086 159 48 17 chr10 3187615 3188030 -137128735 + MSTA LTR MaLR 1 428 0 1588 154 41 20 chr10 3188384 3188494 -137128271 + AluJo SINE Alu 1 107 -205 279 0 0 0 chr10 3188494 3188525 -137128240 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1588 154 41 20 chr10 3188525 3188706 -137128059 + AluJo SINE Alu 107 298 -14 595 245 74 25 chr10 3189235 3189398 -137127367 - MIR SINE MIR -21 241 71 431 358 46 30 chr10 3190049 3190421 -137126344 + L1ME3A LINE L1 5558 5935 -235 2139 97 3 7 chr10 3191862 3192160 -137124605 - AluSx SINE Alu -15 297 1 1739 189 63 5 chr10 3192345 3192787 -137123978 + MLT2B1 LTR ERVL 3 520 0 300 219 183 29 chr10 3192894 3193031 -137123734 - L1MDb LINE L1 -4853 1689 1532 335 269 25 52 chr10 3193049 3193151 -137123614 - L1MDb LINE L1 -5089 1533 1430 2240 91 0 3 chr10 3193151 3193448 -137123317 - AluSc SINE Alu -13 296 1 335 269 25 52 chr10 3193448 3193525 -137123240 - L1MDb LINE L1 -5192 1430 1290 1872 184 26 13 chr10 3194167 3194552 -137122213 - MLT1B LTR MaLR 0 390 1 192 40 0 0 chr10 3194650 3194675 -137122090 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 286 26 0 chr10 3195263 3195340 -137121425 + GA-rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr10 3196560 3196584 -137120181 + AT_rich Low_complexity Low_complexity 1 24 0 226 316 144 22 chr10 3197349 3197488 -137119277 + L2 LINE L2 3115 3270 -2 270 290 0 0 chr10 3197607 3197669 -137119096 - L2 LINE L2 -3 3310 3249 274 325 34 72 chr10 3197684 3197949 -137118816 - L2 LINE L2 -1407 1907 1653 1545 179 7 39 chr10 3198063 3198371 -137118394 - AluJo SINE Alu -14 298 1 296 364 125 32 chr10 3198587 3199180 -137117585 - L2 LINE L2 -2212 1102 455 377 227 68 0 chr10 3199208 3199296 -137117469 + MLT1A2 LTR MaLR 1 94 -280 1418 231 76 32 chr10 3199301 3199707 -137117058 + MER70A LTR ERVL 13 436 -36 417 202 11 11 chr10 3199945 3200034 -137116731 + MLT1A2 LTR MaLR 80 168 -206 2140 98 3 20 chr10 3200034 3200340 -137116425 + AluSx SINE Alu 1 301 -11 372 211 0 0 chr10 3200381 3200452 -137116313 + MLT1A2 LTR MaLR 285 355 -35 855 322 80 19 chr10 3201841 3202214 -137114551 + L2 LINE L2 2918 3313 0 276 284 102 24 chr10 3202267 3202394 -137114371 - MIR SINE MIR -74 188 52 209 221 34 0 chr10 3203504 3203626 -137113139 + CT-rich Low_complexity Low_complexity 1 126 0 226 301 72 0 chr10 3203717 3203800 -137112965 - Charlie1 DNA MER1_type -317 2444 2356 675 231 18 96 chr10 3204110 3204392 -137112373 + L1MD3 LINE L1 7035 7294 -701 243 224 0 79 chr10 3204406 3204482 -137112283 + MLT1F1 LTR MaLR 34 103 -464 608 231 62 0 chr10 3205863 3206023 -137110742 + L1MD3 LINE L1 7739 7908 -87 1190 101 0 0 chr10 3206052 3206220 -137110545 - AluY SINE Alu -9 302 135 251 167 45 15 chr10 3206221 3206287 -137110478 + L1MD3 LINE L1 7928 7995 0 183 269 185 0 chr10 3206452 3206560 -137110205 + MIR SINE MIR 91 218 -44 27 81 0 0 chr10 3207218 3207280 -137109485 + AT_rich Low_complexity Low_complexity 1 62 0 1549 173 13 26 chr10 3207332 3207638 -137109127 - AluJb SINE Alu -8 304 3 1813 125 7 27 chr10 3207949 3208245 -137108520 + AluSx SINE Alu 1 290 -22 4706 132 53 74 chr10 3209325 3210925 -137105840 - pTR5 LTR ERV1 -9 2429 63 268 313 61 30 chr10 3212004 3212135 -137104630 - Charlie8 DNA MER1_type -2274 143 9 2207 162 37 29 chr10 3212139 3212683 -137104082 + MLT2A2 LTR ERVL 1 554 0 1848 192 48 22 chr10 3212983 3213399 -137103366 + MSTC LTR MaLR 2 428 0 385 311 27 0 chr10 3213448 3213596 -137103169 + MER63A DNA MER1_type 51 202 -8 2296 68 7 7 chr10 3213745 3214054 -137102711 + AluSx SINE Alu 1 309 -3 562 203 101 34 chr10 3214107 3214255 -137102510 + MLT1C LTR MaLR 18 175 -292 1549 170 3 42 chr10 3215781 3216092 -137100673 - AluJb SINE Alu -11 301 3 1092 171 89 20 chr10 3216303 3216549 -137100216 + L1MA5 LINE L1 6038 6300 0 3318 236 75 35 chr10 3216552 3216773 -137099992 - L1MD2 LINE L1 -14 6345 6134 234 0 0 0 chr10 3216773 3216799 -137099966 + (TG)n Simple_repeat Simple_repeat 2 27 0 3318 236 75 35 chr10 3216799 3217908 -137098857 - L1MD2 LINE L1 -225 6134 4975 2335 162 2 2 chr10 3218002 3218410 -137098355 - L1MB3 LINE L1 -9 6174 5767 601 194 0 0 chr10 3218415 3218513 -137098252 + L1MB3 LINE L1 5652 5749 -422 1072 295 50 14 chr10 3218527 3218944 -137097821 - L1MD2 LINE L1 -1234 4912 4481 439 286 9 0 chr10 3219057 3219169 -137097596 - MER63A DNA MER1_type 0 210 98 423 175 35 9 chr10 3219232 3219346 -137097419 + CT-rich Low_complexity Low_complexity 1 117 0 1039 222 63 11 chr10 3219466 3219750 -137097015 + L1MA4 LINE L1 5999 6297 -3 203 387 50 0 chr10 3220880 3220999 -137095766 + L3b LINE CR1 1232 1356 -227 266 286 0 14 chr10 3221204 3221274 -137095491 + L3 LINE CR1 1504 1572 -5 1209 70 41 0 chr10 3222830 3223002 -137093763 - AluY SINE Alu 0 311 133 304 316 15 52 chr10 3223483 3223619 -137093146 - MIR SINE MIR -14 248 118 2962 187 25 33 chr10 3223625 3224268 -137092497 - LTR48B LTR ERV1 -3 641 4 1999 143 0 0 chr10 3224591 3224891 -137091874 - AluSx SINE Alu -12 300 1 208 283 0 33 chr10 3225538 3225598 -137091167 + CT-rich Low_complexity Low_complexity 3 60 0 240 295 85 16 chr10 3226903 3227032 -137089733 + MER45A DNA AcHobo 40 177 -1 190 370 54 0 chr10 3227238 3227330 -137089435 - MIR SINE MIR -123 139 43 1256 171 40 5 chr10 3227841 3228063 -137088702 + MER30 DNA MER1_type 1 230 0 1869 102 0 11 chr10 3228634 3228898 -137087867 - AluSq SINE Alu -52 261 1 349 233 33 0 chr10 3229361 3229451 -137087314 - MER103 DNA DNA -8 158 66 715 274 33 12 chr10 3229455 3229700 -137087065 - Charlie5 DNA MER1_type -28 2584 2335 245 192 0 3 chr10 3229714 3229807 -137086958 - AluY SINE Alu -177 125 1 1418 203 24 100 chr10 3231843 3232262 -137084503 + L1MB3 LINE L1 5364 5750 -421 1085 183 10 0 chr10 3232264 3232472 -137084293 + L1MB3 LINE L1 5973 6182 -1 191 283 50 17 chr10 3232637 3232697 -137084068 - L3 LINE CR1 -478 1099 1038 313 333 7 35 chr10 3232972 3233113 -137083652 - MIR3 SINE MIR -32 176 40 306 0 0 0 chr10 3233647 3233681 -137083084 + (CA)n Simple_repeat Simple_repeat 1 34 0 1349 215 20 27 chr10 3233859 3234157 -137082608 + AluJo SINE Alu 1 296 -6 36 40 0 0 chr10 3234182 3234232 -137082533 + AT_rich Low_complexity Low_complexity 1 50 0 2466 43 3 0 chr10 3234304 3234606 -137082159 + AluY SINE Alu 1 303 -8 1638 204 95 16 chr10 3235297 3235728 -137081037 + MER31B LTR ERV1 2 466 0 258 313 67 33 chr10 3235865 3236015 -137080750 - L2 LINE L2 -923 2391 2237 1799 239 25 15 chr10 3236129 3236601 -137080164 - MER90 LTR ERV1 -68 546 70 2186 115 13 10 chr10 3236768 3237072 -137079693 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 3239812 3239833 -137076932 + AT_rich Low_complexity Low_complexity 1 21 0 2042 125 10 7 chr10 3240307 3240602 -137076163 + AluSx SINE Alu 1 296 -16 184 219 0 0 chr10 3240684 3240725 -137076040 - MIR3 SINE MIR -26 182 142 206 255 0 0 chr10 3241946 3241997 -137074768 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 247 292 26 62 chr10 3242531 3242644 -137074121 + MIR SINE MIR 33 141 -67 341 203 123 88 chr10 3242832 3242890 -137073875 - ORSL DNA AcHobo -28 247 193 1859 129 0 0 chr10 3242890 3243153 -137073612 - AluSg SINE Alu -5 305 43 341 203 123 88 chr10 3243153 3243321 -137073444 - ORSL DNA AcHobo -82 193 13 188 283 0 0 chr10 3243360 3243420 -137073345 - L2 LINE L2 -58 3255 3196 3852 194 27 17 chr10 3244096 3244920 -137071845 - L1MB3 LINE L1 -1 6182 5351 2779 97 5 0 chr10 3245015 3245388 -137071377 + THE1C LTR MaLR 1 375 0 223 290 65 32 chr10 3245589 3245682 -137071083 - MIR3 SINE MIR -110 98 3 426 195 18 9 chr10 3246881 3246994 -137069771 + CT-rich Low_complexity Low_complexity 1 114 0 207 100 0 0 chr10 3247013 3247043 -137069722 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 210 369 9 27 chr10 3247643 3247754 -137069011 - MIR3 SINE MIR -93 115 7 2051 136 147 8 chr10 3248341 3248715 -137068050 - MSTA LTR MaLR -2 426 1 1309 214 79 25 chr10 3248989 3249345 -137067420 + MER74A LTR ERVL 151 525 -33 252 0 0 0 chr10 3249596 3249624 -137067141 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1789 159 3 29 chr10 3249820 3250129 -137066636 - AluJo SINE Alu -11 301 1 2637 106 0 8 chr10 3251377 3251744 -137065021 + THE1B LTR MaLR 1 364 0 3068 171 147 71 chr10 3251746 3252520 -137064245 + THE1B-int LTR MaLR 3 835 -816 1026 116 0 14 chr10 3252520 3252666 -137064099 + THE1B LTR MaLR 221 364 0 1572 205 61 23 chr10 3254075 3254504 -137062261 - Charlie1b DNA MER1_type 0 523 79 2314 99 0 3 chr10 3254765 3255059 -137061706 - AluSq SINE Alu -20 293 1 55 65 0 43 chr10 3257645 3257830 -137058935 + AT_rich Low_complexity Low_complexity 1 177 0 22 0 0 0 chr10 3257869 3257891 -137058874 + AT_rich Low_complexity Low_complexity 1 22 0 1992 124 7 3 chr10 3257989 3258308 -137058457 - AluSx SINE Alu 0 320 1 384 244 23 74 chr10 3259186 3259362 -137057403 + MER5A DNA MER1_type 14 180 -9 539 190 84 39 chr10 3259545 3259724 -137057041 - MER5A DNA MER1_type -2 187 1 2310 112 0 6 chr10 3260152 3260466 -137056299 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr10 3260797 3260818 -137055947 + AT_rich Low_complexity Low_complexity 1 21 0 1327 145 30 98 chr10 3260964 3261301 -137055464 - L1MB8 LINE L1 -4 6174 5861 1276 225 39 0 chr10 3261303 3261610 -137055155 - L1MC3 LINE L1 0 7785 7467 1199 174 9 0 chr10 3261622 3261841 -137054924 - L1MA8 LINE L1 -1 6290 6070 2108 195 49 117 chr10 3261981 3262319 -137054446 - LTR8A LTR ERV1 0 727 464 3241 77 9 2 chr10 3262319 3262747 -137054018 + L1PA7 LINE L1 5722 6152 -2 2108 195 49 117 chr10 3262747 3263146 -137053619 - LTR8A LTR ERV1 -263 464 40 247 289 96 7 chr10 3264304 3264439 -137052326 + MIR3 SINE MIR 44 190 -18 323 183 12 0 chr10 3266307 3266389 -137050376 + CT-rich Low_complexity Low_complexity 2 84 0 299 221 206 29 chr10 3266831 3266967 -137049798 + Ricksha DNA DNA 136 295 -959 * 844 175 0 7 chr10 3266957 3267111 -137049654 + Ricksha DNA DNA 1692 1844 -1402 2915 218 30 21 chr10 3267159 3267819 -137048946 + Ricksha DNA DNA 1819 2484 -762 * 3401 209 56 27 chr10 3267802 3268694 -137048071 + Ricksha DNA DNA 2318 3235 -11 293 109 18 0 chr10 3268750 3268805 -137047960 + (CA)n Simple_repeat Simple_repeat 1 56 0 263 226 75 21 chr10 3268860 3268953 -137047812 + MER45A DNA AcHobo 80 177 -1 261 0 0 0 chr10 3271048 3271077 -137045688 + (T)n Simple_repeat Simple_repeat 1 29 0 2024 128 3 13 chr10 3271636 3271942 -137044823 + AluSx SINE Alu 1 303 -9 1576 192 78 19 chr10 3272257 3272627 -137044138 + MSTD LTR MaLR 1 392 -4 516 156 0 0 chr10 3272673 3272763 -137044002 + GA-rich Low_complexity Low_complexity 3 92 0 583 170 6 33 chr10 3272894 3273076 -137043689 + GA-rich Low_complexity Low_complexity 2 178 0 2280 209 20 8 chr10 3273433 3273927 -137042838 + L1MB8 LINE L1 5505 6004 -174 315 267 72 44 chr10 3273936 3274116 -137042649 - LTR16B LTR ERVL -160 304 120 445 145 0 0 chr10 3274683 3274752 -137042013 - L1PB1 LINE L1 -249 5902 5834 1556 120 8 4 chr10 3274752 3274987 -137041778 + L1PB1 LINE L1 5908 6149 -2 385 223 36 36 chr10 3275423 3275535 -137041230 - MER69 DNA AcHobo -2414 112 1 3279 233 33 20 chr10 3275994 3276119 -137040646 + L1ME1 LINE L1 5158 5280 -886 180 77 0 0 chr10 3276119 3276145 -137040620 + (CA)n Simple_repeat Simple_repeat 2 27 0 3279 233 33 20 chr10 3276145 3276959 -137039806 + L1ME1 LINE L1 5280 6110 -56 2163 114 3 22 chr10 3278211 3278526 -137038239 + AluSg SINE Alu 1 309 -1 615 247 57 98 chr10 3278636 3279179 -137037586 + L1MC5 LINE L1 7391 7911 -50 265 383 8 8 chr10 3279280 3279408 -137037357 + MIR SINE MIR 19 146 -116 1209 238 57 25 chr10 3279832 3280185 -137036580 - MLT1A1 LTR MaLR 0 365 2 342 61 0 0 chr10 3280404 3280453 -137036312 + (CA)n Simple_repeat Simple_repeat 2 50 0 284 369 17 0 chr10 3282073 3282199 -137034566 + MIR SINE MIR 37 162 -65 621 72 0 0 chr10 3282230 3282313 -137034452 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 320 182 55 9 chr10 3282324 3282434 -137034331 + GA-rich Low_complexity Low_complexity 3 117 0 276 30 0 0 chr10 3284235 3284268 -137032497 + (CA)n Simple_repeat Simple_repeat 2 34 0 2883 146 8 22 chr10 3284525 3285024 -137031741 + L1MA8 LINE L1 5629 6120 -171 995 261 35 17 chr10 3285375 3285662 -137031103 - MLT1E LTR MaLR 0 593 302 246 371 59 6 chr10 3287029 3287199 -137029566 - MIR SINE MIR -57 205 27 457 271 66 7 chr10 3287596 3287747 -137029018 + MLT1A2 LTR MaLR 1 160 -214 273 200 93 7 chr10 3287890 3288033 -137028732 + MLT1B LTR MaLR 16 179 -211 500 186 9 0 chr10 3288055 3288168 -137028597 + CT-rich Low_complexity Low_complexity 2 115 0 * 713 245 7 4 chr10 3288152 3288349 -137028416 + MLT1B LTR MaLR 173 383 -7 475 292 15 8 chr10 3288397 3288527 -137028238 + L2 LINE L2 3136 3266 -6 255 319 26 35 chr10 3288585 3288698 -137028067 - MIR SINE MIR -62 146 35 1967 110 37 0 chr10 3289551 3289854 -137026911 - AluSx SINE Alu 0 313 1 305 281 31 0 chr10 3290027 3290123 -137026642 - MER5A DNA MER1_type -6 183 85 219 204 0 0 chr10 3290378 3290427 -137026338 + (TG)n Simple_repeat Simple_repeat 1 49 0 645 196 0 33 chr10 3290438 3290622 -137026143 + (TG)n Simple_repeat Simple_repeat 2 179 0 2177 100 4 0 chr10 3291693 3291974 -137024791 + AluSq SINE Alu 1 282 -31 210 71 0 0 chr10 3291979 3292007 -137024758 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 1498 191 32 45 chr10 3292547 3292925 -137023840 - MER93b LTR ERV1 0 373 1 1201 210 34 92 chr10 3294963 3295174 -137021591 - MER57A LTR ERV1 -1 402 225 2280 115 0 0 chr10 3295174 3295478 -137021287 - AluSx SINE Alu -8 304 1 1201 210 34 92 chr10 3295478 3295680 -137021085 - MER57A LTR ERV1 -178 225 13 26 0 0 0 chr10 3296089 3296115 -137020650 + AT_rich Low_complexity Low_complexity 1 26 0 300 287 128 14 chr10 3296183 3296370 -137020395 - MIR SINE MIR -46 216 17 241 233 0 58 chr10 3296913 3296999 -137019766 + LTR29 LTR ERV1 1 81 -541 * 1330 222 91 29 chr10 3296990 3297409 -137019356 + MER39 LTR ERV1 260 704 -3 265 339 64 35 chr10 3297428 3297599 -137019166 - MIR SINE MIR -31 231 56 228 67 0 0 chr10 3299589 3299619 -137017146 + (GGA)n Simple_repeat Simple_repeat 1 30 0 181 324 70 0 chr10 3300413 3300484 -137016281 + MIR SINE MIR 61 136 -126 266 280 13 0 chr10 3300513 3300588 -137016177 + (CA)n Simple_repeat Simple_repeat 1 76 0 1230 194 36 12 chr10 3301003 3301156 -137015609 + MLT1A1 LTR MaLR 1 165 -200 2346 85 0 0 chr10 3301156 3301457 -137015308 + AluY SINE Alu 1 301 0 1230 194 36 12 chr10 3301457 3301554 -137015211 + MLT1A1 LTR MaLR 165 258 -107 744 134 0 0 chr10 3301689 3301801 -137014964 + MLT1A1 LTR MaLR 254 365 0 275 315 91 17 chr10 3303660 3303901 -137012864 + LTR16B LTR ERVL 194 452 -12 1948 164 0 3 chr10 3303969 3304273 -137012492 + AluJo SINE Alu 1 303 -9 2086 104 11 0 chr10 3304412 3304733 -137012032 + AluSp SINE Alu 1 313 0 1460 233 29 11 chr10 3304891 3305273 -137011492 + MLT1B LTR MaLR 1 389 -1 1091 246 81 0 chr10 3306219 3306552 -137010213 - MLT1B LTR MaLR -24 366 7 306 322 35 53 chr10 3308777 3308948 -137007817 - MIR SINE MIR -70 192 25 264 112 73 47 chr10 3310466 3310702 -137006063 + (TCTA)n Simple_repeat Simple_repeat 1 242 0 207 298 0 0 chr10 3310955 3311012 -137005753 - MIR SINE MIR -186 76 20 317 280 28 9 chr10 3311228 3311335 -137005430 + MER5A DNA MER1_type 1 109 -80 270 81 0 0 chr10 3311474 3311511 -137005254 + (A)n Simple_repeat Simple_repeat 1 37 0 27 73 0 0 chr10 3312405 3312460 -137004305 + AT_rich Low_complexity Low_complexity 1 55 0 2301 94 10 0 chr10 3312969 3313268 -137003497 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 3315713 3315734 -137001031 + AT_rich Low_complexity Low_complexity 1 21 0 246 271 0 17 chr10 3315910 3315969 -137000796 - MIR SINE MIR -88 174 117 1793 167 7 66 chr10 3317948 3318356 -136998409 + MLT1B LTR MaLR 1 384 -6 2309 108 7 7 chr10 3318597 3318902 -136997863 - AluSx SINE Alu -7 305 1 280 292 42 0 chr10 3318913 3319009 -136997756 + LTR67 LTR ERVL 458 557 0 2643 147 36 74 chr10 3319155 3319537 -136997228 + LTR26B LTR ERV1 1 359 -172 2027 123 14 0 chr10 3319537 3319840 -136996925 + AluSx SINE Alu 1 307 0 2643 147 36 74 chr10 3319840 3320006 -136996759 + LTR26B LTR ERV1 359 530 -1 332 316 83 26 chr10 3320902 3321095 -136995670 + MIR SINE MIR 24 227 -35 182 306 69 14 chr10 3321757 3321829 -136994936 + L2 LINE L2 3142 3217 -55 270 0 0 0 chr10 3323133 3323163 -136993602 + (TC)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr10 3323162 3323185 -136993580 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 234 300 0 25 chr10 3323223 3323303 -136993462 + MIR SINE MIR 166 243 -19 267 103 0 0 chr10 3323311 3323350 -136993415 + (TG)n Simple_repeat Simple_repeat 2 40 0 2047 119 20 0 chr10 3323719 3324012 -136992753 - AluSx SINE Alu -13 299 1 1914 94 11 34 chr10 3324705 3324970 -136991795 - AluSg SINE Alu -16 294 36 2803 208 45 46 chr10 3325510 3326355 -136990410 + L1MB8 LINE L1 5335 6178 0 573 42 0 0 chr10 3327411 3327483 -136989282 + (TC)n Simple_repeat Simple_repeat 1 72 0 1960 179 40 71 chr10 3328224 3328537 -136988228 - MLT1D LTR MaLR -3 502 209 2231 42 4 11 chr10 3328537 3328821 -136987944 - AluY SINE Alu 0 300 19 1960 179 40 71 chr10 3328821 3329024 -136987741 - MLT1D LTR MaLR -296 209 1 237 268 123 58 chr10 3329145 3329303 -136987462 + L1ME LINE L1 5617 5763 -358 1738 240 87 23 chr10 3329303 3329832 -136986933 - MLT1F1 LTR MaLR 0 567 5 237 268 123 58 chr10 3329832 3329949 -136986816 + L1ME LINE L1 5763 5910 -211 729 266 22 3 chr10 3330152 3330338 -136986427 + MIR SINE MIR 1 190 -18 314 352 72 0 chr10 3330312 3330437 -136986328 - MER5B DNA MER1_type -44 134 1 * 2732 36 0 0 chr10 3330688 3330991 -136985774 + AluYa5 SINE Alu 1 303 -8 366 180 0 90 chr10 3331524 3331613 -136985152 - MIR3 SINE MIR -2 206 126 1291 203 34 69 chr10 3331986 3332306 -136984459 - AluSx SINE Alu -3 309 1 4061 192 23 9 chr10 3332314 3333189 -136983576 - L1MC3 LINE L1 -3 7782 5444 4160 107 0 88 chr10 3333758 3334486 -136982279 - MER4A LTR ERV1 0 664 1 249 277 130 48 chr10 3334784 3334986 -136981779 - MIR SINE MIR -11 251 17 29 0 0 0 chr10 3334986 3335015 -136981750 + AT_rich Low_complexity Low_complexity 1 29 0 280 247 88 71 chr10 3336466 3336636 -136980129 - MER34 LTR ERV1 -2 540 450 465 207 41 130 chr10 3336757 3337003 -136979762 - MER34C LTR ERV1 -321 264 41 2586 80 0 3 chr10 3337092 3337403 -136979362 + AluSx SINE Alu 3 312 0 298 288 120 33 chr10 3338013 3338197 -136978568 - MIR SINE MIR 0 262 63 25 0 0 0 chr10 3338214 3338239 -136978526 + AT_rich Low_complexity Low_complexity 1 25 0 7589 198 15 21 chr10 3338254 3340802 -136975963 - L1MA10 LINE L1 0 6334 3800 230 203 0 17 chr10 3340870 3340929 -136975836 + CT-rich Low_complexity Low_complexity 3 60 0 218 105 26 0 chr10 3343032 3343070 -136973695 + (TTA)n Simple_repeat Simple_repeat 1 39 0 333 308 56 43 chr10 3343653 3343975 -136972790 + MER46C DNA MER2_type 11 336 -2 2281 116 6 0 chr10 3344217 3344528 -136972237 + AluSq SINE Alu 1 313 0 2134 104 27 0 chr10 3344692 3344989 -136971776 - AluSx SINE Alu -2 310 6 21 0 0 0 chr10 3345436 3345457 -136971308 + AT_rich Low_complexity Low_complexity 1 21 0 384 191 0 0 chr10 3346280 3346364 -136970401 + (CA)n Simple_repeat Simple_repeat 1 84 0 208 339 0 33 chr10 3347433 3347613 -136969152 + (CACG)n Simple_repeat Simple_repeat 4 177 0 275 317 0 33 chr10 3347848 3348028 -136968737 + (CACG)n Simple_repeat Simple_repeat 4 177 0 252 176 0 157 chr10 3349454 3349556 -136967209 + LTR46-int LTR ERV1 525 610 -6375 2325 89 0 10 chr10 3349940 3350242 -136966523 + AluY SINE Alu 2 300 -11 1648 173 0 31 chr10 3350243 3350532 -136966233 + AluSx SINE Alu 17 296 -16 803 131 31 8 chr10 3350683 3350813 -136965952 - FLAM_C SINE Alu 0 133 1 1371 283 74 20 chr10 3352459 3352947 -136963818 - LTR40a LTR ERVL 0 519 6 407 300 29 14 chr10 3353585 3353725 -136963040 + MLT1J1 LTR MaLR 64 205 -241 1376 215 101 46 chr10 3354182 3354620 -136962145 - MER31B LTR ERV1 0 466 5 466 216 166 14 chr10 3354935 3355074 -136961691 - MER58B DNA MER1_type -1 340 181 949 240 103 39 chr10 3355124 3355512 -136961253 + LTR37A LTR ERV1 13 425 -1 2381 80 0 46 chr10 3356958 3357284 -136959481 - AluY SINE Alu 0 311 1 270 268 32 16 chr10 3357422 3357545 -136959220 + (TA)n Simple_repeat Simple_repeat 1 125 0 988 75 14 7 chr10 3359568 3359715 -136957050 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 865 215 178 24 chr10 3360588 3360805 -136955960 + MER2 DNA MER2_type 1 278 -66 2082 141 0 0 chr10 3360805 3361103 -136955662 - AluSx SINE Alu -14 298 1 865 215 178 24 chr10 3361103 3361183 -136955582 + MER2 DNA MER2_type 278 344 0 422 207 58 0 chr10 3361498 3361585 -136955180 - MER2 DNA MER2_type -200 145 54 837 38 0 0 chr10 3361589 3361694 -136955071 + (GA)n Simple_repeat Simple_repeat 1 105 0 2171 113 24 0 chr10 3361820 3362113 -136954652 + AluSq SINE Alu 1 300 -13 225 317 52 57 chr10 3364506 3364736 -136952029 - L1MCc LINE L1 -6176 247 19 1875 154 34 0 chr10 3364795 3364917 -136951848 + AluSx SINE Alu 1 117 -195 240 35 0 0 chr10 3364917 3364946 -136951819 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1875 154 34 0 chr10 3364946 3365116 -136951649 + AluSx SINE Alu 117 303 -9 23 0 0 0 chr10 3365122 3365145 -136951620 + AT_rich Low_complexity Low_complexity 1 23 0 535 168 35 0 chr10 3366406 3366519 -136950246 - MER96B DNA MER1_type? -50 367 251 434 324 50 16 chr10 3366739 3366921 -136949844 + MIR SINE MIR 75 262 0 207 214 0 0 chr10 3366921 3366963 -136949802 + (TTG)n Simple_repeat Simple_repeat 2 43 0 180 252 29 68 chr10 3367831 3367934 -136948831 - L2 LINE L2 -250 3022 2924 212 364 8 8 chr10 3368645 3368763 -136948002 - L2 LINE L2 -1 3312 3195 493 226 36 67 chr10 3369562 3369757 -136947008 + LTR33 LTR ERVL 19 207 -314 257 295 60 34 chr10 3369890 3370039 -136946726 + LTR33 LTR ERVL 367 519 -2 275 264 130 0 chr10 3371119 3371221 -136945544 + MIR SINE MIR 45 157 -62 644 230 11 59 chr10 3371652 3371839 -136944926 + MER5B DNA MER1_type 1 178 0 182 289 121 12 chr10 3372208 3372291 -136944474 + L2 LINE L2 3184 3275 -38 1870 183 21 18 chr10 3372302 3372691 -136944074 - MLT1B LTR MaLR 0 390 1 1649 156 7 40 chr10 3373832 3374133 -136942632 + AluJb SINE Alu 1 291 -21 404 293 0 43 chr10 3374151 3374339 -136942426 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 446 297 11 34 chr10 3374367 3374542 -136942223 + (TATG)n Simple_repeat Simple_repeat 1 171 0 264 77 0 0 chr10 3377081 3377120 -136939645 + (CA)n Simple_repeat Simple_repeat 1 39 0 266 25 0 50 chr10 3377136 3377176 -136939589 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1557 205 15 36 chr10 3377843 3378179 -136938586 + MLT1A1 LTR MaLR 4 332 -33 303 290 153 0 chr10 3378469 3378593 -136938172 - MIR SINE MIR -14 248 106 2245 153 33 2 chr10 3379162 3379555 -136937210 - L1M2 LINE L1 -558 5742 5338 3378 141 36 10 chr10 3379555 3379990 -136936775 + L1MA4 LINE L1 5698 6154 -146 2334 116 36 30 chr10 3379990 3380352 -136936413 + THE1B LTR MaLR 1 364 0 3378 141 36 10 chr10 3380352 3380495 -136936270 + L1MA4 LINE L1 6154 6292 -8 731 169 15 0 chr10 3380521 3380657 -136936108 + L1MA4 LINE L1 6163 6300 0 2269 152 93 0 chr10 3381235 3381644 -136935121 + LTR47A LTR ERVL 6 452 0 266 339 0 8 chr10 3381785 3381912 -136934853 + MIR SINE MIR 96 221 -41 2154 158 26 16 chr10 3382360 3382746 -136934019 + L1PA15 LINE L1 5774 6163 -2 247 130 0 0 chr10 3382841 3382887 -136933878 + L1MC4 LINE L1 6658 6703 -1339 207 225 0 0 chr10 3382888 3382928 -136933837 + (TA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 3383148 3383169 -136933596 + AT_rich Low_complexity Low_complexity 1 21 0 270 343 30 35 chr10 3383194 3383395 -136933370 + MIR SINE MIR 15 214 -48 2052 123 3 3 chr10 3385869 3386161 -136930604 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 3386711 3386733 -136930032 + AT_rich Low_complexity Low_complexity 1 22 0 368 265 0 0 chr10 3387631 3387714 -136929051 - MLT1D LTR MaLR -389 116 34 2827 274 78 55 chr10 3387714 3390277 -136926488 + L1ME3A LINE L1 3346 5990 -180 1676 143 20 61 chr10 3390277 3390602 -136926163 - AluJb SINE Alu 0 313 1 2827 274 78 55 chr10 3390602 3390742 -136926023 + L1ME3A LINE L1 5990 6125 -45 25 0 0 0 chr10 3390871 3390896 -136925869 + AT_rich Low_complexity Low_complexity 1 25 0 2176 119 17 0 chr10 3392038 3392340 -136924425 + AluSq SINE Alu 1 307 -6 28 29 0 0 chr10 3393036 3393071 -136923694 + AT_rich Low_complexity Low_complexity 1 35 0 289 310 150 0 chr10 3394737 3394850 -136921915 + MIR SINE MIR 63 192 -70 2317 90 3 26 chr10 3395248 3395560 -136921205 + AluSp SINE Alu 1 305 -8 403 322 99 7 chr10 3395679 3395831 -136920934 + MIR3 SINE MIR 37 202 -6 2127 107 0 0 chr10 3396090 3396393 -136920372 + AluSx SINE Alu 12 314 0 2299 122 0 0 chr10 3396545 3396849 -136919916 + AluSx SINE Alu 1 304 -8 282 262 192 77 chr10 3397627 3397913 -136918852 - MLT1E1 LTR MaLR -23 631 313 4214 76 53 32 chr10 3398352 3398642 -136918123 + L1PB1 LINE L1 5522 5804 -347 369 0 0 0 chr10 3398642 3398683 -136918082 + (CA)n Simple_repeat Simple_repeat 1 41 0 4214 76 53 32 chr10 3398683 3399009 -136917756 + L1PB1 LINE L1 5804 6151 0 1835 237 59 13 chr10 3399043 3399498 -136917267 + MLT1D LTR MaLR 13 488 -17 3462 218 36 139 chr10 3399518 3401044 -136915721 + MLT1D-int LTR MaLR 3 1371 0 1025 228 25 22 chr10 3401044 3401320 -136915445 + MLT1D LTR MaLR 1 277 -228 1394 171 74 119 chr10 3401327 3401954 -136914811 + LTR49 LTR ERV1 5 565 0 1013 228 50 0 chr10 3401954 3402173 -136914592 + MLT1D LTR MaLR 276 505 0 2400 68 0 42 chr10 3403440 3403747 -136913018 - AluY SINE Alu -13 298 5 435 267 0 0 chr10 3404159 3404264 -136912501 + MIR SINE MIR 97 201 -61 2213 117 39 28 chr10 3404433 3404793 -136911972 + THE1B LTR MaLR 1 364 0 2392 59 28 0 chr10 3406354 3406643 -136910122 - AluY SINE Alu -14 297 1 2311 119 14 6 chr10 3408384 3408736 -136908029 + THE1A LTR MaLR 1 355 0 2154 124 10 3 chr10 3410605 3410911 -136905854 - AluSq SINE Alu -5 308 1 621 306 198 14 chr10 3413471 3413975 -136902790 - L2 LINE L2 -599 2715 2119 22 0 0 0 chr10 3414793 3414815 -136901950 + AT_rich Low_complexity Low_complexity 1 22 0 1947 138 0 43 chr10 3414870 3415175 -136901590 + AluSx SINE Alu 1 292 -20 5643 129 19 2 chr10 3415411 3416623 -136900142 + L1PB3 LINE L1 4926 6154 0 21 71 0 0 chr10 3418363 3418405 -136898360 + AT_rich Low_complexity Low_complexity 1 42 0 2402 82 0 0 chr10 3419395 3419689 -136897076 - AluSg SINE Alu -16 294 1 441 297 30 25 chr10 3421840 3422076 -136894689 - L3 LINE CR1 -190 1387 1151 288 346 26 19 chr10 3422544 3422700 -136894065 + (TATATG)n Simple_repeat Simple_repeat 1 157 0 * 426 354 17 0 chr10 3422637 3422812 -136893953 + (TG)n Simple_repeat Simple_repeat 1 178 0 309 117 81 18 chr10 3423243 3423354 -136893411 + (CTATA)n Simple_repeat Simple_repeat 3 120 0 189 94 0 0 chr10 3424820 3424852 -136891913 + (CCCTAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 3425799 3425821 -136890944 + AT_rich Low_complexity Low_complexity 1 22 0 419 273 169 7 chr10 3427419 3427573 -136889192 - MIR SINE MIR -45 217 39 331 228 126 36 chr10 3428726 3428893 -136887872 - MIR SINE MIR -17 245 64 213 39 0 0 chr10 3428927 3428953 -136887812 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1030 260 101 9 chr10 3430885 3431231 -136885534 - MLT1B LTR MaLR -12 378 1 399 339 60 50 chr10 3431816 3432167 -136884598 - L1ME4a LINE L1 -269 5852 5493 347 56 19 0 chr10 3432167 3432221 -136884544 + (CA)n Simple_repeat Simple_repeat 2 56 0 399 339 60 50 chr10 3432221 3432353 -136884412 - L1ME4a LINE L1 -628 5493 5364 323 273 53 33 chr10 3432769 3432919 -136883846 - L1ME4a LINE L1 -1111 5035 4883 2066 148 48 31 chr10 3433442 3433800 -136882965 + THE1B LTR MaLR 1 364 0 276 233 17 0 chr10 3434005 3434065 -136882700 + MLT1A1 LTR MaLR 2 62 -366 620 263 80 77 chr10 3434100 3434374 -136882391 + MLT1A1 LTR MaLR 80 354 -11 2257 159 36 31 chr10 3435598 3436146 -136880619 - MLT2A2 LTR ERVL 0 554 1 333 47 0 0 chr10 3436674 3436717 -136880048 + (TTA)n Simple_repeat Simple_repeat 3 45 0 7244 51 1 1 chr10 3436718 3438264 -136878501 - L1PA5 LINE L1 -16 6138 4597 1649 136 19 0 chr10 3440423 3440688 -136876077 - L1MA8 LINE L1 -28 6263 5994 847 99 8 0 chr10 3440938 3441059 -136875706 - AluSg/x SINE Alu -13 297 176 278 237 45 128 chr10 3441082 3441238 -136875527 + MIR SINE MIR 47 189 -73 2059 53 32 0 chr10 3441719 3441966 -136874799 + L1PA7 LINE L1 5900 6154 0 23 0 0 0 chr10 3442250 3442273 -136874492 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 3444197 3444225 -136872540 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr10 3444771 3444808 -136871957 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1608 50 0 0 chr10 3444808 3444989 -136871776 - L1PA3 LINE L1 -18 6137 5957 871 177 0 0 chr10 3445506 3445647 -136871118 - AluJb SINE Alu -32 280 140 664 247 67 109 chr10 3445749 3445765 -136871000 - L1MC5 LINE L1 -87 7874 7859 2352 67 3 0 chr10 3445765 3446048 -136870717 - AluSp SINE Alu -29 284 1 664 247 67 109 chr10 3446048 3446597 -136870168 - L1MC5 LINE L1 -102 7859 7333 472 198 108 0 chr10 3446601 3446712 -136870053 + Charlie5 DNA MER1_type 2 124 -2488 1348 197 72 40 chr10 3446712 3447088 -136869677 + Charlie5 DNA MER1_type 2236 2623 0 245 118 0 0 chr10 3447687 3447721 -136869044 + HSMAR1 DNA Mariner 1 34 -1253 789 272 48 97 chr10 3447739 3448306 -136868459 - L1MC5 LINE L1 -812 7149 6611 29 47 0 0 chr10 3448345 3448388 -136868377 + AT_rich Low_complexity Low_complexity 1 43 0 2361 100 0 3 chr10 3448676 3448986 -136867779 - AluSg SINE Alu -1 309 1 225 204 19 48 chr10 3450813 3450916 -136865849 + (TTATA)n Simple_repeat Simple_repeat 4 103 0 4698 36 0 0 chr10 3451504 3452028 -136864737 + L1PA5 LINE L1 5629 6152 -2 398 248 57 0 chr10 3452493 3452634 -136864131 - MER103 DNA DNA -14 152 4 2025 145 0 7 chr10 3452660 3452964 -136863801 - AluSx SINE Alu -10 302 1 265 331 0 8 chr10 3453226 3453353 -136863412 + (TA)n Simple_repeat Simple_repeat 1 126 0 412 270 25 17 chr10 3453568 3453752 -136863013 + L1ME LINE L1 5478 5575 -546 1845 162 3 19 chr10 3453801 3454116 -136862649 - AluSx SINE Alu -2 310 1 265 296 56 38 chr10 3454697 3454896 -136861869 + L1ME LINE L1 5686 5825 -296 200 332 179 11 chr10 3455277 3455467 -136861298 + MIR SINE MIR 27 248 -14 282 29 0 0 chr10 3455620 3455655 -136861110 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 264 90 42 chr10 3455667 3455811 -136860954 - MLT2B2 LTR ERVL -81 434 284 * 614 203 50 51 chr10 3455786 3455988 -136860777 - MLT2B1 LTR ERVL -255 209 1 26 64 0 0 chr10 3456051 3456098 -136860667 + AT_rich Low_complexity Low_complexity 1 47 0 3458 149 10 0 chr10 3456113 3456622 -136860143 + MER75 DNA T2_type 1 514 0 496 251 175 54 chr10 3456723 3457077 -136859688 + MLT1H LTR MaLR 117 513 -36 1663 172 31 0 chr10 3457290 3457581 -136859184 - AluJb SINE Alu -6 306 7 563 273 20 0 chr10 3459358 3459508 -136857257 + MER58B DNA MER1_type 185 337 -4 581 123 123 0 chr10 3460248 3460362 -136856403 + L1MA4 LINE L1 6169 6296 -4 306 319 8 0 chr10 3460528 3460647 -136856118 - MER45A DNA AcHobo 0 178 59 549 264 17 17 chr10 3462215 3462393 -136854372 - MER45A DNA AcHobo 0 178 1 210 308 125 42 chr10 3464695 3464815 -136851950 - MIR SINE MIR -116 146 17 260 276 257 0 chr10 3466492 3466597 -136850168 - L2 LINE L2 -4 3268 3137 2299 99 7 0 chr10 3468559 3468861 -136847904 + AluSq SINE Alu 1 304 -9 183 80 0 0 chr10 3469650 3469675 -136847090 + (GA)n Simple_repeat Simple_repeat 1 25 0 605 101 39 51 chr10 3469677 3469855 -136846910 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 501 117 62 41 chr10 3469889 3470234 -136846531 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 665 90 34 34 chr10 3470293 3470470 -136846295 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 389 230 11 0 chr10 3471599 3471686 -136845079 + MER33 DNA MER1_type 1 88 -236 671 133 97 67 chr10 3471826 3472021 -136844744 + MER33 DNA MER1_type 90 290 -34 234 347 60 7 chr10 3473852 3474002 -136842763 - MARNA DNA Mariner -27 559 402 21 0 0 0 chr10 3475467 3475488 -136841277 + AT_rich Low_complexity Low_complexity 1 21 0 360 355 17 29 chr10 3475895 3476067 -136840698 - MIR3 SINE MIR -6 202 33 2225 111 13 3 chr10 3476647 3476954 -136839811 - AluSx SINE Alu 0 312 3 812 163 8 0 chr10 3478363 3478492 -136838273 + FLAM_C SINE Alu 1 130 -13 474 316 21 21 chr10 3479841 3480034 -136836731 + MIR SINE MIR 70 262 0 22 0 0 0 chr10 3480081 3480103 -136836662 + AT_rich Low_complexity Low_complexity 1 22 0 2321 100 0 0 chr10 3480885 3481184 -136835581 + AluSq SINE Alu 1 299 -14 648 102 0 0 chr10 3481404 3481492 -136835273 - MLT1D LTR MaLR -45 460 373 1319 227 96 67 chr10 3481624 3482105 -136834660 + MLT1D LTR MaLR 3 497 -8 440 296 62 40 chr10 3482327 3482631 -136834134 - L1ME4a LINE L1 -262 5859 5549 21 0 0 0 chr10 3483054 3483075 -136833690 + AT_rich Low_complexity Low_complexity 1 21 0 239 361 83 0 chr10 3483089 3483222 -136833543 + MIR SINE MIR 119 262 0 284 257 0 9 chr10 3484566 3484675 -136832090 + (TG)n Simple_repeat Simple_repeat 1 108 0 450 376 0 0 chr10 3484687 3484865 -136831900 + (TG)n Simple_repeat Simple_repeat 1 178 0 21 71 0 0 chr10 3486053 3486095 -136830670 + AT_rich Low_complexity Low_complexity 1 42 0 181 170 0 85 chr10 3486241 3486288 -136830477 + L2 LINE L2 3230 3272 0 511 318 88 10 chr10 3487369 3487561 -136829204 + MIR SINE MIR 11 217 -45 21 36 0 0 chr10 3487632 3487660 -136829105 + AT_rich Low_complexity Low_complexity 1 28 0 357 293 68 63 chr10 3488033 3488477 -136828288 + L1ME4a LINE L1 5569 6014 -107 2334 78 7 0 chr10 3488773 3489239 -136827526 - AluSx SINE Alu 0 468 1 1845 86 37 19 chr10 3490048 3490316 -136826449 + AluY SINE Alu 39 311 0 207 0 0 0 chr10 3490918 3490941 -136825824 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 532 148 0 0 chr10 3490943 3491024 -136825741 - AluSp/q SINE Alu -21 292 212 289 311 78 26 chr10 3491843 3492036 -136824729 - Charlie8 DNA MER1_type -2190 227 25 979 207 85 48 chr10 3492114 3492466 -136824299 - MLT1A1 LTR MaLR 0 365 1 353 308 135 39 chr10 3493413 3493672 -136823093 - L2 LINE L2 -1415 1899 1666 3057 75 5 5 chr10 3493672 3494085 -136822680 - L1PA10 LINE L1 0 6168 5756 353 308 135 39 chr10 3494085 3494283 -136822482 - L2 LINE L2 -1648 1666 1398 2354 72 0 3 chr10 3495040 3495332 -136821433 + AluY SINE Alu 21 311 0 227 339 0 0 chr10 3495379 3495441 -136821324 + MIR SINE MIR 58 119 -143 514 222 157 0 chr10 3495890 3496075 -136820690 + L1ME2 LINE L1 4698 4911 -1235 233 330 35 0 chr10 3496146 3496261 -136820504 + L1ME2 LINE L1 5010 5128 -1018 * 1522 252 102 10 chr10 3496231 3496976 -136819789 + L1ME2 LINE L1 5330 6156 -14 1081 197 0 0 chr10 3497760 3497963 -136818802 + L1PA16 LINE L1 1 203 -6646 * 12353 197 18 19 chr10 3497960 3502056 -136814709 + L1PA16 LINE L1 998 5098 -1771 195 42 0 0 chr10 3502056 3502080 -136814685 + (CA)n Simple_repeat Simple_repeat 1 24 0 12353 197 18 19 chr10 3502080 3503548 -136813217 + L1PA16 LINE L1 5098 6565 -304 313 64 0 0 chr10 3503557 3503604 -136813161 - Alu SINE Alu 0 302 256 1498 164 13 41 chr10 3503604 3503922 -136812843 + L1PA16 LINE L1 6559 6867 -2 30 27 0 0 chr10 3503978 3504015 -136812750 + AT_rich Low_complexity Low_complexity 1 37 0 186 167 0 0 chr10 3504045 3504081 -136812684 + (TA)n Simple_repeat Simple_repeat 2 37 0 583 114 0 11 chr10 3505104 3505192 -136811573 - AluS SINE Alu -225 88 2 783 157 15 66 chr10 3505460 3505658 -136811107 - MER65A LTR ERV1 -2 443 256 27 49 0 0 chr10 3506648 3506689 -136810076 + AT_rich Low_complexity Low_complexity 1 41 0 288 130 0 0 chr10 3507369 3507415 -136809350 + (T)n Simple_repeat Simple_repeat 1 46 0 277 239 138 62 chr10 3508558 3508818 -136807947 + L1ME4a LINE L1 5492 5771 -350 249 260 30 0 chr10 3509082 3509182 -136807583 + L1ME4a LINE L1 6003 6105 -16 29 47 0 0 chr10 3509253 3509296 -136807469 + AT_rich Low_complexity Low_complexity 1 43 0 923 105 0 30 chr10 3509310 3509443 -136807322 - FLAM_C SINE Alu -6 137 9 193 56 28 28 chr10 3510660 3510696 -136806069 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 225 291 108 7 chr10 3510724 3510872 -136805893 - MER103 DNA DNA -2 164 2 4134 72 18 0 chr10 3511801 3512356 -136804409 + L1PB1 LINE L1 5583 6147 -4 284 234 85 21 chr10 3512879 3512973 -136803792 - L2 LINE L2 -11 3261 3162 1829 173 21 0 chr10 3512990 3513326 -136803439 + MER7A DNA MER2_type 6 346 0 22 0 0 0 chr10 3514429 3514451 -136802314 + AT_rich Low_complexity Low_complexity 1 22 0 430 223 47 7 chr10 3517091 3517239 -136799526 + MER53 DNA DNA 8 161 -28 1087 206 54 97 chr10 3517511 3517893 -136798872 + MLT1C LTR MaLR 22 390 0 1272 299 103 23 chr10 3518161 3518863 -136797902 + L1ME3A LINE L1 5383 6140 -30 1442 127 0 49 chr10 3518904 3519092 -136797673 - L1PB1 LINE L1 -1 6150 5975 1980 124 64 3 chr10 3519092 3519375 -136797390 - AluSc SINE Alu -9 300 1 1442 127 0 49 chr10 3519375 3519431 -136797334 - L1PB1 LINE L1 -176 5975 5918 401 233 10 19 chr10 3519457 3519560 -136797205 - MLT2D LTR ERVL -230 184 83 852 317 70 19 chr10 3519842 3520789 -136795976 - L1MC4a LINE L1 -831 5315 4948 221 360 107 0 chr10 3522144 3522294 -136794471 - L2 LINE L2 -2050 1264 1099 207 88 0 0 chr10 3522415 3522449 -136794316 + (TC)n Simple_repeat Simple_repeat 2 35 0 302 326 17 76 chr10 3523332 3523504 -136793261 - MER5B DNA MER1_type -15 163 2 29 0 0 0 chr10 3524149 3524178 -136792587 + AT_rich Low_complexity Low_complexity 1 29 0 528 167 10 0 chr10 3524512 3524614 -136792151 - FLAM_A SINE Alu -4 138 36 556 285 52 10 chr10 3524614 3524919 -136791846 + MLT1J LTR MaLR 40 357 -154 1021 103 27 0 chr10 3524936 3525082 -136791683 + BC200 scRNA scRNA 1 150 -50 241 186 57 129 chr10 3525083 3525183 -136791582 + MLT1J LTR MaLR 394 485 -26 3822 76 39 9 chr10 3525183 3525744 -136791021 - L1PA10 LINE L1 0 6168 5606 241 186 57 129 chr10 3525744 3525767 -136790998 + MLT1J LTR MaLR 485 508 -3 2266 69 26 23 chr10 3526830 3527136 -136789629 - AluSq SINE Alu -6 307 1 231 262 12 0 chr10 3527797 3527881 -136788884 - MER53 DNA DNA 0 189 105 461 108 0 48 chr10 3529858 3529941 -136786824 - L1PA10 LINE L1 0 6168 6090 798 19 37 0 chr10 3529941 3530049 -136786716 + L1P LINE L1 5316 5427 -734 450 286 136 15 chr10 3530180 3530386 -136786379 - MIR SINE MIR -18 244 14 199 329 101 25 chr10 3531173 3531331 -136785434 - MIR SINE MIR -9 253 84 2453 68 0 0 chr10 3532669 3532965 -136783800 - AluY SINE Alu -15 296 1 23 54 0 0 chr10 3533128 3533165 -136783600 + AT_rich Low_complexity Low_complexity 1 37 0 460 266 154 0 chr10 3533490 3533678 -136783087 - MLT1L LTR MaLR -8 607 391 219 307 13 13 chr10 3533948 3534023 -136782742 - L2 LINE L2 0 3272 3198 929 178 6 12 chr10 3534947 3535110 -136781655 - FRAM SINE Alu -14 162 1 516 193 106 19 chr10 3535121 3535282 -136781483 + Charlie1b DNA MER1_type 109 283 -240 819 198 11 21 chr10 3537855 3538042 -136778723 - AluJo SINE Alu -13 299 115 2196 229 59 39 chr10 3538522 3539115 -136777650 - MER77 LTR ERV1 0 605 1 362 304 26 41 chr10 3539322 3539516 -136777249 + MLT1K LTR MaLR 154 344 -244 447 86 14 20 chr10 3539633 3539718 -136777047 - MLT1E1 LTR MaLR -512 81 1 257 254 33 90 chr10 3539721 3539843 -136776922 - MIR SINE MIR -67 195 81 1236 221 60 62 chr10 3540127 3540543 -136776222 + MLT1C LTR MaLR 9 423 -44 780 184 6 34 chr10 3540689 3540851 -136775914 - L1ME LINE L1 -547 5574 5421 * 3757 201 89 10 chr10 3540849 3542086 -136774679 - L1MB8 LINE L1 -4 6174 4834 2062 143 0 7 chr10 3542302 3542479 -136774286 - AluSx SINE Alu -6 306 130 189 74 0 0 chr10 3542479 3542506 -136774259 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2062 143 0 7 chr10 3542506 3542636 -136774129 - AluSx SINE Alu -182 130 1 1118 196 86 8 chr10 3543030 3543275 -136773490 + MLT1C LTR MaLR 1 264 -203 296 254 83 55 chr10 3545442 3545623 -136771142 - MIR SINE MIR -6 256 71 237 160 40 20 chr10 3545771 3545821 -136770944 + MIR SINE MIR 90 140 -122 198 0 0 0 chr10 3545929 3545951 -136770814 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2137 118 3 0 chr10 3546333 3546620 -136770145 + AluSx SINE Alu 6 293 -19 1523 224 80 23 chr10 3546832 3547269 -136769496 - MLT1C LTR MaLR 0 467 6 253 300 50 25 chr10 3547384 3547504 -136769261 - MLT1J2 LTR MaLR -45 405 283 1303 213 66 18 chr10 3547635 3548015 -136768750 + L1M4 LINE L1 4901 5298 -848 464 275 178 51 chr10 3548040 3548652 -136768113 + L2 LINE L2 2625 3311 -2 232 277 213 19 chr10 3548707 3548862 -136767903 - L1ME4a LINE L1 -96 6025 5841 229 253 133 0 chr10 3548914 3548989 -136767776 - L1ME4a LINE L1 -2108 5700 5616 1734 87 101 56 chr10 3549065 3549351 -136767414 - AluSg SINE Alu -9 301 3 2056 144 3 3 chr10 3549883 3550195 -136766570 + AluSx SINE Alu 1 312 0 1265 285 93 24 chr10 3550233 3550784 -136765981 + MLT1E LTR MaLR 5 593 0 338 335 153 0 chr10 3551062 3551232 -136765533 + LTR41 LTR ERVL 342 537 -236 331 153 0 0 chr10 3551336 3551395 -136765370 - AluS SINE Alu -248 60 2 254 358 75 11 chr10 3551674 3551861 -136764904 - MIR SINE MIR -40 222 24 350 299 76 28 chr10 3552120 3552150 -136764615 - MIR3 SINE MIR -33 175 148 2119 115 0 20 chr10 3552150 3552455 -136764310 - AluSx SINE Alu -13 299 1 350 299 76 28 chr10 3552455 3552568 -136764197 - MIR3 SINE MIR -60 148 25 303 253 126 0 chr10 3552860 3552955 -136763810 - L2 LINE L2 -747 2567 2461 1718 161 16 20 chr10 3553829 3554133 -136762632 + AluJo SINE Alu 1 303 -9 474 254 8 8 chr10 3554332 3554450 -136762315 + L2 LINE L2 3193 3310 -3 363 23 0 0 chr10 3605670 3605714 -136711051 + (TG)n Simple_repeat Simple_repeat 1 44 0 1550 99 5 0 chr10 3606388 3606601 -136710164 - AluSq SINE Alu -18 295 82 282 324 50 22 chr10 3606601 3606732 -136710033 - MIR SINE MIR -76 186 49 207 200 24 47 chr10 3607187 3607272 -136709493 + (CCCG)n Simple_repeat Simple_repeat 2 84 0 248 310 80 0 chr10 3607756 3607869 -136708896 - MIR SINE MIR -55 207 86 23 0 0 0 chr10 3608167 3608190 -136708575 + AT_rich Low_complexity Low_complexity 1 23 0 705 133 0 17 chr10 3608256 3608376 -136708389 - L1PA13 LINE L1 -1 6162 6045 206 261 138 0 chr10 3608878 3608943 -136707822 + MIR SINE MIR 189 262 0 425 155 0 39 chr10 3608990 3609093 -136707672 - L1PA2 LINE L1 0 6155 6057 56 86 0 0 chr10 3609142 3609282 -136707483 + GC_rich Low_complexity Low_complexity 1 140 0 504 189 0 0 chr10 3609441 3609584 -136707181 + (CA)n Simple_repeat Simple_repeat 1 143 0 314 80 20 0 chr10 3609698 3609748 -136707017 + MADE1 DNA Mariner 30 80 0 183 80 0 0 chr10 3611135 3611160 -136705605 + (A)n Simple_repeat Simple_repeat 1 25 0 231 280 23 76 chr10 3611355 3611487 -136705278 + L2 LINE L2 3189 3313 0 * 426 333 77 16 chr10 3611481 3611664 -136705101 - MIR SINE MIR -18 244 51 1648 123 19 112 chr10 3612588 3612962 -136703803 - MER44D DNA MER2_type 0 609 1 201 39 0 0 chr10 3613007 3613033 -136703732 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 324 264 66 16 chr10 3614397 3614518 -136702247 + MIR SINE MIR 107 233 -29 517 192 24 6 chr10 3614923 3615267 -136701498 + (TG)n Simple_repeat Simple_repeat 1 350 0 181 371 171 12 chr10 3615726 3615896 -136700869 - MIR SINE MIR -20 242 46 941 151 0 17 chr10 3617011 3617183 -136699582 - L1MA5A LINE L1 -7 6290 6122 391 323 65 26 chr10 3619422 3619654 -136697111 - L2 LINE L2 0 3313 3073 291 295 213 22 chr10 3619689 3620055 -136696710 - L2 LINE L2 -342 2972 2537 209 373 18 9 chr10 3620439 3620549 -136696216 - MIR SINE MIR -127 135 25 275 265 0 10 chr10 3620659 3620757 -136696008 + (TATG)n Simple_repeat Simple_repeat 2 98 0 26 0 0 0 chr10 3620787 3620813 -136695952 + AT_rich Low_complexity Low_complexity 1 26 0 1645 175 0 4 chr10 3621168 3621448 -136695317 + AluJb SINE Alu 1 279 -33 230 200 40 0 chr10 3621458 3621508 -136695257 - MLT1A1 LTR MaLR -313 52 1 1970 25 0 4 chr10 3623660 3623901 -136692864 - L1P LINE L1 -779 5367 5128 1222 14 0 0 chr10 3623901 3624046 -136692719 + L1P LINE L1 4981 5125 -1021 22 0 0 0 chr10 3624279 3624301 -136692464 + AT_rich Low_complexity Low_complexity 1 22 0 402 277 42 0 chr10 3624847 3624966 -136691799 + L1MC4 LINE L1 6580 6703 -1339 351 213 32 75 chr10 3624958 3625052 -136691713 + L1MC4 LINE L1 6614 6703 -1339 * 464 313 13 13 chr10 3625680 3625830 -136690935 + MIR SINE MIR 2 151 -111 399 154 0 154 chr10 3625837 3625941 -136690824 - MER1B DNA MER1_type 0 329 242 246 149 15 119 chr10 3625993 3626060 -136690705 - MER1B DNA MER1_type -63 276 217 561 314 49 14 chr10 3626197 3626420 -136690345 + HERVL LTR ERVL 3321 3551 -2213 1042 307 172 29 chr10 3626507 3627422 -136689343 + HERVL LTR ERVL 3621 4671 -852 344 291 208 21 chr10 3628056 3628297 -136688468 + LTR33 LTR ERVL 3 288 -233 4670 151 46 15 chr10 3628607 3629748 -136687017 - L1MA5A LINE L1 -195 6102 4939 * 5075 172 22 27 chr10 3629741 3630752 -136686013 + L1MA5A LINE L1 3932 4937 -1209 651 278 116 4 chr10 3630765 3631006 -136685759 + L2 LINE L2 3022 3289 -24 1563 133 8 0 chr10 3633546 3633787 -136682978 - AluSx SINE Alu -15 297 55 798 207 101 30 chr10 3634640 3635073 -136681692 - MLT1D LTR MaLR 0 505 1 241 290 168 23 chr10 3635245 3635376 -136681389 - MIR SINE MIR -40 222 73 289 304 18 36 chr10 3635421 3635533 -136681232 - MIR SINE MIR -88 174 65 234 273 0 0 chr10 3636235 3636290 -136680475 - HAL1 LINE L1 -811 1696 1642 242 339 0 0 chr10 3636951 3637016 -136679749 + L2 LINE L2 3249 3313 0 427 296 71 12 chr10 3637459 3637699 -136679066 - HAL1 LINE L1 -744 1763 1510 850 64 0 0 chr10 3638764 3638873 -136677892 - L1P LINE L1 -5129 1017 909 3670 47 0 24 chr10 3638873 3639373 -136677392 + L1PA4 LINE L1 5686 6174 0 230 0 33 0 chr10 3643403 3643433 -136673332 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1916 114 78 0 chr10 3643474 3643745 -136673020 + AluSg SINE Alu 1 292 -18 407 228 44 0 chr10 3645355 3645469 -136671296 + MIR SINE MIR 26 144 -118 1507 232 16 16 chr10 3645763 3646130 -136670635 + MLT1B LTR MaLR 8 374 -16 338 182 15 0 chr10 3646559 3646625 -136670140 - L1MA7 LINE L1 -428 5863 5797 267 279 46 82 chr10 3647051 3647270 -136669495 - L2 LINE L2 -2 3311 3101 2087 140 3 3 chr10 3647321 3647629 -136669136 - AluSx SINE Alu -4 308 1 337 291 35 70 chr10 3648272 3648359 -136668406 + L3 LINE CR1 1144 1224 -353 2056 140 0 3 chr10 3648359 3648651 -136668114 + AluSc SINE Alu 1 291 -18 337 291 35 70 chr10 3648651 3648735 -136668030 + L3 LINE CR1 1224 1309 -268 185 319 42 0 chr10 3649639 3649711 -136667054 - MIR SINE MIR -117 145 71 1163 225 49 70 chr10 3649877 3650263 -136666502 - MLT1B LTR MaLR -10 380 3 318 258 68 53 chr10 3650403 3650535 -136666230 - MIR SINE MIR -107 155 22 200 150 0 50 chr10 3652551 3652591 -136664174 + L2 LINE L2 3223 3260 -12 217 316 32 21 chr10 3655153 3655248 -136661517 - MER5A DNA MER1_type 0 189 94 215 229 21 0 chr10 3655352 3655400 -136661365 + CT-rich Low_complexity Low_complexity 4 52 0 311 277 21 7 chr10 3655533 3655654 -136661111 - MIR SINE MIR -74 134 15 226 189 0 0 chr10 3656439 3656476 -136660289 - LTR33 LTR ERVL 0 521 485 261 270 34 34 chr10 3656675 3656764 -136660001 - MERVL LTR ERVL -2286 3199 3111 1947 304 58 16 chr10 3657120 3657910 -136658855 - MERVL LTR ERVL -3048 2716 1894 223 329 12 75 chr10 3657973 3658134 -136658631 - L2 LINE L2 -888 2426 2276 1138 133 0 0 chr10 3658244 3658402 -136658363 + AluSc SINE Alu 135 292 -17 586 330 14 0 chr10 3658464 3658673 -136658092 - L2 LINE L2 -1259 2055 1844 285 51 0 0 chr10 3659771 3659810 -136656955 + (TG)n Simple_repeat Simple_repeat 2 40 0 332 128 0 0 chr10 3660085 3660132 -136656633 + AluJ/FLAM SINE Alu 14 60 -242 674 179 0 16 chr10 3660132 3660255 -136656510 - AluJo SINE Alu -122 190 70 252 0 0 0 chr10 3660277 3660305 -136656460 + (A)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 3660305 3660326 -136656439 + (GA)n Simple_repeat Simple_repeat 2 22 0 987 201 22 35 chr10 3660774 3661003 -136655762 + AluJo SINE Alu 71 296 -16 189 0 0 0 chr10 3662386 3662407 -136654358 + (TC)n Simple_repeat Simple_repeat 2 22 0 1725 176 7 21 chr10 3662422 3662712 -136654053 - AluJo SINE Alu -25 287 2 192 40 0 0 chr10 3663023 3663048 -136653717 + (A)n Simple_repeat Simple_repeat 1 25 0 281 262 36 12 chr10 3664671 3664755 -136652010 + MER103 DNA DNA 57 142 -24 2998 101 10 2 chr10 3664863 3665279 -136651486 + L1PB1 LINE L1 5720 6138 -13 194 0 39 0 chr10 3665282 3665308 -136651457 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 292 176 14 14 chr10 3665323 3665397 -136651368 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2720 30 0 0 chr10 3666791 3667092 -136649673 - AluY SINE Alu -10 301 1 225 154 0 0 chr10 3668160 3668199 -136648566 + CT-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr10 3668846 3668867 -136647898 + GC_rich Low_complexity Low_complexity 1 21 0 516 252 35 0 chr10 3668867 3669010 -136647755 + MER5A DNA MER1_type 42 189 0 181 219 0 0 chr10 3669091 3669132 -136647633 + MER5B DNA MER1_type 5 45 -133 270 0 0 0 chr10 3669314 3669344 -136647421 + (TG)n Simple_repeat Simple_repeat 1 30 0 627 291 110 68 chr10 3669848 3670395 -136646370 + MLT1K LTR MaLR 14 583 -5 2159 112 7 3 chr10 3670773 3671067 -136645698 + AluSx SINE Alu 1 295 -17 2375 76 0 0 chr10 3671794 3672084 -136644681 - AluSc SINE Alu -19 290 1 218 256 11 67 chr10 3672824 3672873 -136643892 + L2 LINE L2 3184 3227 -45 3988 137 9 16 chr10 3672873 3672992 -136643773 - MER41B LTR ERV1 -2 633 515 2163 115 26 10 chr10 3672992 3673297 -136643468 + AluSq SINE Alu 1 310 -3 3988 137 9 16 chr10 3673297 3673814 -136642951 - MER41B LTR ERV1 -120 515 1 218 256 11 67 chr10 3673814 3673854 -136642911 + L2 LINE L2 3227 3268 -4 940 244 110 60 chr10 3673932 3674468 -136642297 + HAL1 LINE L1 1427 1989 -518 221 313 52 26 chr10 3674469 3674584 -136642181 + L2 LINE L2 3151 3268 -4 589 282 74 29 chr10 3674740 3675091 -136641674 + HAL1 LINE L1 2120 2486 -21 2246 207 76 8 chr10 3675183 3675694 -136641071 + MER44D DNA MER2_type 1 601 -4 273 285 179 20 chr10 3676920 3677071 -136639694 + MIR3 SINE MIR 8 182 -26 249 162 73 0 chr10 3679101 3679169 -136637596 + MIR SINE MIR 73 145 -117 725 296 73 54 chr10 3679495 3680121 -136636644 + L1MEc LINE L1 1593 2230 -4166 901 266 94 16 chr10 3680162 3680598 -136636167 + L1MEc LINE L1 2272 2741 -3474 306 243 110 143 chr10 3680614 3680915 -136635850 + L1MEc LINE L1 3051 3341 -2874 2472 195 133 16 chr10 3682483 3683113 -136633652 + MER39 LTR ERV1 4 707 0 23 33 0 0 chr10 3685528 3685558 -136631207 + AT_rich Low_complexity Low_complexity 1 30 0 2604 58 0 0 chr10 3685634 3685945 -136630820 - AluY SINE Alu 0 311 1 202 295 13 13 chr10 3687287 3687365 -136629400 - MIR SINE MIR -17 245 168 212 317 46 63 chr10 3687465 3687749 -136629016 + L2 LINE L2 2212 2490 -824 195 42 0 0 chr10 3687749 3687773 -136628992 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 200 349 0 0 chr10 3689440 3689503 -136627262 + (CACG)n Simple_repeat Simple_repeat 2 64 0 2261 111 0 16 chr10 3689921 3690236 -136626529 + AluSx SINE Alu 1 310 -2 2255 65 0 7 chr10 3691360 3691635 -136625130 - AluY SINE Alu 0 311 39 719 317 80 47 chr10 3692232 3692476 -136624289 - L1ME LINE L1 -4993 1090 856 2254 115 0 0 chr10 3692476 3692772 -136623993 - AluSx SINE Alu -16 296 1 719 317 80 47 chr10 3692772 3693564 -136623201 - L1ME LINE L1 -5227 856 22 235 236 67 118 chr10 3693756 3694053 -136622712 - L1M4 LINE L1 -907 5239 4958 455 304 35 47 chr10 3694440 3694611 -136622154 + MIR SINE MIR 24 192 -70 2127 110 3 3 chr10 3694615 3694925 -136621840 + AluSx SINE Alu 3 312 0 609 276 7 73 chr10 3695433 3695708 -136621057 - L2 LINE L2 0 3313 3057 1802 142 48 0 chr10 3697084 3697379 -136619386 + AluSx SINE Alu 1 309 -3 343 296 91 59 chr10 3697520 3697702 -136619063 - L1M4 LINE L1 -1419 4727 4533 2338 106 48 31 chr10 3697702 3698060 -136618705 + THE1B LTR MaLR 1 364 0 343 296 91 59 chr10 3698060 3698130 -136618635 - L1M4 LINE L1 -1613 4533 4467 26 0 0 0 chr10 3698764 3698790 -136617975 + AT_rich Low_complexity Low_complexity 1 26 0 2079 117 0 0 chr10 3699059 3699349 -136617416 - AluSx SINE Alu -1 311 22 600 133 0 0 chr10 3699349 3699432 -136617333 - AluS SINE Alu -228 84 2 360 320 58 29 chr10 3699798 3700004 -136616761 - MIR SINE MIR -3 259 48 225 222 28 14 chr10 3700041 3700113 -136616652 + MLT1F1 LTR MaLR 8 80 -487 272 296 178 0 chr10 3700230 3700399 -136616366 + MLT1G1 LTR MaLR 358 556 -39 405 0 0 0 chr10 3701780 3701825 -136614940 + (CA)n Simple_repeat Simple_repeat 1 45 0 995 188 117 78 chr10 3702039 3702348 -136614417 - MLT1A1 LTR MaLR -32 333 13 378 352 58 19 chr10 3702685 3702758 -136614007 + L1ME LINE L1 5312 5381 -740 249 33 0 0 chr10 3702758 3702788 -136613977 + (TA)n Simple_repeat Simple_repeat 2 31 0 378 352 58 19 chr10 3702788 3703092 -136613673 + L1ME LINE L1 5381 5704 -417 1222 146 34 0 chr10 3703181 3703387 -136613378 + Tigger2 DNA MER2_type 1 213 -2505 886 172 0 49 chr10 3703384 3703482 -136613283 + Tigger2 DNA MER2_type 2554 2642 -66 * 1991 116 103 3 chr10 3703482 3703802 -136612963 - THE1A LTR MaLR 0 355 4 886 172 0 49 chr10 3703802 3703866 -136612899 + Tigger2 DNA MER2_type 2642 2708 0 24 0 0 0 chr10 3703933 3703957 -136612808 + AT_rich Low_complexity Low_complexity 1 24 0 391 250 96 13 chr10 3704314 3704470 -136612295 + L1ME LINE L1 5500 5668 -453 612 150 2 74 chr10 3704748 3704919 -136611846 - Charlie3 DNA MER1_type -65 2645 159 264 282 24 0 chr10 3705546 3705630 -136611135 - MIR SINE MIR -62 146 59 21 82 0 0 chr10 3707118 3707167 -136609598 + AT_rich Low_complexity Low_complexity 1 49 0 201 121 0 0 chr10 3707335 3707368 -136609397 + (T)n Simple_repeat Simple_repeat 1 33 0 228 176 27 14 chr10 3708150 3708224 -136608541 + (TA)n Simple_repeat Simple_repeat 2 76 0 246 164 0 0 chr10 3709427 3709482 -136607283 + T-rich Low_complexity Low_complexity 1 55 0 224 322 158 33 chr10 3711279 3711431 -136605334 + MIR3 SINE MIR 30 200 -8 241 174 14 29 chr10 3714962 3715031 -136601734 + A-rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 3715280 3715304 -136601461 + GC_rich Low_complexity Low_complexity 1 24 0 214 160 0 107 chr10 3716216 3716291 -136600474 + C-rich Low_complexity Low_complexity 5 71 0 244 280 42 59 chr10 3718029 3718147 -136598618 - MIR3 SINE MIR -38 170 55 21 0 0 0 chr10 3718542 3718563 -136598202 + AT_rich Low_complexity Low_complexity 1 21 0 1894 128 7 0 chr10 3718901 3719190 -136597575 - AluSx SINE Alu -21 291 1 574 284 100 8 chr10 3719588 3719849 -136596916 + L1ME2 LINE L1 4546 4830 -1316 1369 268 52 32 chr10 3719904 3720575 -136596190 - L1MCc LINE L1 -4888 1535 1217 945 262 0 9 chr10 3720575 3720800 -136595965 - MER58A DNA MER1_type -1 223 1 1369 268 52 32 chr10 3720800 3721009 -136595756 - L1MCc LINE L1 -5206 1217 1014 387 239 44 97 chr10 3721075 3721301 -136595464 - L1MCc LINE L1 -5541 882 669 533 254 178 9 chr10 3721329 3721542 -136595223 - L1MCc LINE L1 -5970 453 205 465 211 28 49 chr10 3721554 3721696 -136595069 - L1MCc LINE L1 -6259 164 26 299 183 33 0 chr10 3721696 3721756 -136595009 + L1ME2 LINE L1 4868 4929 -1217 241 213 0 53 chr10 3721790 3721865 -136594900 + A-rich Low_complexity Low_complexity 1 71 0 341 159 0 14 chr10 3721865 3721934 -136594831 + GA-rich Low_complexity Low_complexity 1 68 0 2216 261 91 27 chr10 3721941 3723057 -136593708 + L1ME2 LINE L1 4960 6152 -12 209 220 17 0 chr10 3723220 3723279 -136593486 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 346 253 13 114 chr10 3723416 3723574 -136593191 + MIR SINE MIR 21 162 -100 201 240 91 66 chr10 3723590 3723711 -136593054 - MIR SINE MIR -36 226 103 2074 112 0 0 chr10 3724479 3724794 -136591971 + AluSx SINE Alu 1 315 0 183 156 0 0 chr10 3726155 3726187 -136590578 + (CACG)n Simple_repeat Simple_repeat 1 32 0 188 67 33 0 chr10 3726675 3726705 -136590060 + (TA)n Simple_repeat Simple_repeat 1 31 0 1730 130 72 4 chr10 3727663 3727939 -136588826 - AluSx SINE Alu -17 295 1 651 240 41 77 chr10 3728426 3728647 -136588118 + MER20 DNA MER1_type 1 213 -6 1581 205 73 6 chr10 3728671 3729013 -136587752 + MLT1A1 LTR MaLR 1 365 0 1616 135 15 0 chr10 3729093 3729352 -136587413 + AluSx SINE Alu 47 309 -3 24 32 0 0 chr10 3729358 3729389 -136587376 + AT_rich Low_complexity Low_complexity 1 31 0 356 327 145 0 chr10 3729598 3729757 -136587008 + MIR SINE MIR 81 262 0 190 269 58 0 chr10 3730284 3730336 -136586429 + L3 LINE CR1 1392 1446 -131 527 189 8 0 chr10 3731645 3731772 -136584993 + CT-rich Low_complexity Low_complexity 2 129 0 1979 121 0 0 chr10 3734025 3734328 -136582437 + AluSx SINE Alu 1 303 0 545 278 168 0 chr10 3734403 3734594 -136582171 - MIR SINE MIR 0 262 40 439 229 18 28 chr10 3734614 3734898 -136581867 + GA-rich Low_complexity Low_complexity 1 280 0 439 149 11 11 chr10 3735997 3736091 -136580674 + CT-rich Low_complexity Low_complexity 3 96 0 180 0 0 0 chr10 3737003 3737023 -136579742 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 238 263 75 25 chr10 3739284 3739364 -136577401 + MIR3 SINE MIR 10 93 -115 290 286 12 0 chr10 3740766 3740850 -136575915 + (CA)n Simple_repeat Simple_repeat 1 85 0 231 36 0 0 chr10 3741366 3741394 -136575371 + (CA)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr10 3741564 3741589 -136575176 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 3741626 3741649 -136575116 + AT_rich Low_complexity Low_complexity 1 23 0 359 21 21 0 chr10 3742954 3743002 -136573763 + (GA)n Simple_repeat Simple_repeat 2 50 0 263 191 0 0 chr10 3743623 3743670 -136573095 - MER39 LTR ERV1 -268 439 393 228 143 29 100 chr10 3743718 3743788 -136572977 - MER34 LTR ERV1 -411 131 67 244 214 205 9 chr10 3744398 3744510 -136572255 - MER101 LTR ERV1 -223 251 118 241 121 121 0 chr10 3744720 3744786 -136571979 + (TATAA)n Simple_repeat Simple_repeat 4 77 0 469 96 48 0 chr10 3745358 3745441 -136571324 + T-rich Low_complexity Low_complexity 3 89 0 2124 137 16 0 chr10 3745446 3745752 -136571013 - AluSq SINE Alu 0 313 3 2182 113 3 0 chr10 3745754 3746046 -136570719 - AluSx SINE Alu -13 299 7 2068 126 0 19 chr10 3746079 3746397 -136570368 - AluSx SINE Alu 0 312 1 237 159 0 0 chr10 3747085 3747129 -136569636 + (CA)n Simple_repeat Simple_repeat 1 44 0 201 154 0 0 chr10 3747129 3747168 -136569597 + (TG)n Simple_repeat Simple_repeat 2 40 0 482 374 62 10 chr10 3747347 3747748 -136569017 - L2 LINE L2 -27 3286 2865 450 293 120 4 chr10 3748054 3748313 -136568452 - L2 LINE L2 -923 2391 2103 343 329 6 32 chr10 3749659 3749817 -136566948 + MER63A DNA MER1_type 36 189 -21 24 53 0 0 chr10 3751201 3751239 -136565526 + AT_rich Low_complexity Low_complexity 1 38 0 473 135 73 21 chr10 3751513 3751609 -136565156 + MER4A LTR ERV1 1 101 -563 * 1878 123 6 25 chr10 3751608 3751958 -136564807 + MER4A LTR ERV1 263 664 0 2116 108 22 0 chr10 3752149 3752450 -136564315 + AluSq SINE Alu 1 307 0 340 316 84 33 chr10 3752462 3752854 -136563911 - L2 LINE L2 -422 2892 2481 538 263 45 58 chr10 3752942 3753166 -136563599 + MLT1E LTR MaLR 27 247 -346 3609 148 45 54 chr10 3753166 3753743 -136563022 + L1MA8 LINE L1 5560 6130 -161 2340 139 55 0 chr10 3753743 3754125 -136562640 - MER57A LTR ERV1 0 403 1 3609 148 45 54 chr10 3754125 3754285 -136562480 + L1MA8 LINE L1 6130 6290 -1 251 244 0 39 chr10 3754285 3754355 -136562410 + MLT1E LTR MaLR 521 589 -4 666 290 128 5 chr10 3754361 3754744 -136562021 - L2 LINE L2 -940 2374 1945 345 123 12 37 chr10 3754861 3754942 -136561823 + (TTCTC)n Simple_repeat Simple_repeat 3 81 0 * 635 94 10 0 chr10 3754928 3755024 -136561741 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 1592 193 43 3 chr10 3755037 3755337 -136561428 - AluJb SINE Alu 0 312 1 2121 114 0 35 chr10 3755698 3756015 -136560750 - AluY SINE Alu -5 306 1 1543 206 96 54 chr10 3756040 3756226 -136560539 + MLT2B2 LTR ERVL 3 180 -335 4564 125 25 10 chr10 3756226 3756907 -136559858 - LTR8 LTR ERV1 0 691 1 1543 206 96 54 chr10 3756907 3757147 -136559618 + MLT2B2 LTR ERVL 180 447 -68 186 43 0 0 chr10 3757150 3757173 -136559592 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 215 170 0 19 chr10 3757173 3757226 -136559539 + (TG)n Simple_repeat Simple_repeat 2 53 0 306 329 79 14 chr10 3757298 3757438 -136559327 - HAL1 LINE L1 -1131 1376 1228 291 157 0 0 chr10 3757547 3757598 -136559167 + (CA)n Simple_repeat Simple_repeat 2 52 0 249 211 0 0 chr10 3757633 3757690 -136559075 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 249 308 93 0 chr10 3757694 3757801 -136558964 + L2 LINE L2 3156 3272 0 22 0 0 0 chr10 3757847 3757869 -136558896 + AT_rich Low_complexity Low_complexity 1 22 0 2061 80 30 36 chr10 3758347 3758519 -136558246 - AluY SINE Alu -9 302 131 221 0 0 33 chr10 3758519 3758549 -136558216 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2061 80 30 36 chr10 3758549 3758678 -136558087 - AluY SINE Alu -180 131 3 448 294 47 56 chr10 3758711 3758925 -136557840 - HAL1 LINE L1 -1144 1363 1152 728 228 7 0 chr10 3759302 3759451 -136557314 + FRAM SINE Alu 9 158 -18 2073 112 0 4 chr10 3759459 3759773 -136556992 + AluSx SINE Alu 9 321 0 25 31 0 0 chr10 3759816 3759848 -136556917 + AT_rich Low_complexity Low_complexity 1 32 0 1278 99 0 6 chr10 3760917 3761088 -136555677 - AluSg/x SINE Alu -18 294 125 216 0 0 0 chr10 3763040 3763064 -136553701 + (A)n Simple_repeat Simple_repeat 1 24 0 425 328 52 35 chr10 3813277 3813317 -136503448 - MLT1K LTR MaLR -5 583 545 1815 129 23 42 chr10 3813317 3813626 -136503139 - AluSq SINE Alu -10 303 1 425 328 52 35 chr10 3813626 3813814 -136502951 - MLT1K LTR MaLR -43 545 351 24 0 0 0 chr10 3814380 3814404 -136502361 + AT_rich Low_complexity Low_complexity 1 24 0 1384 164 4 9 chr10 3814404 3814630 -136502135 - AluSx SINE Alu -87 225 1 1365 134 5 0 chr10 3814632 3814848 -136501917 - AluSq SINE Alu -2 311 95 1983 149 3 0 chr10 3815585 3815893 -136500872 - AluSx SINE Alu -2 310 2 22 0 0 0 chr10 3816511 3816533 -136500232 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 3816572 3816604 -136500161 + AT_rich Low_complexity Low_complexity 1 32 0 1619 114 0 48 chr10 3816606 3816877 -136499888 - AluSc SINE Alu -7 302 45 1831 158 0 0 chr10 3818329 3818620 -136498145 + AluSx SINE Alu 1 291 -21 222 128 0 0 chr10 3818875 3818914 -136497851 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr10 3819143 3819172 -136497593 + AT_rich Low_complexity Low_complexity 1 29 0 2300 64 0 10 chr10 3819750 3820045 -136496720 + AluY SINE Alu 1 292 -19 2303 169 14 43 chr10 3820886 3821019 -136495746 + MSTC LTR MaLR 2 137 -291 949 125 0 18 chr10 3821019 3821187 -136495578 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 1880 139 0 0 chr10 3821187 3821467 -136495298 - AluSx SINE Alu -32 280 1 2303 169 14 43 chr10 3821467 3821770 -136494995 + MSTC LTR MaLR 135 426 -2 213 206 48 16 chr10 3823182 3823245 -136493520 + (CAGGG)n Simple_repeat Simple_repeat 2 66 0 279 273 45 50 chr10 3823813 3823970 -136492795 - MIR3 SINE MIR -62 146 8 806 189 0 0 chr10 3824552 3824684 -136492081 - THE1C LTR MaLR -243 132 1 198 0 0 0 chr10 3824849 3824871 -136491894 + (TC)n Simple_repeat Simple_repeat 2 23 0 214 236 125 28 chr10 3824913 3824985 -136491780 - L2 LINE L2 -20 3252 3174 1893 130 34 0 chr10 3825335 3825628 -136491137 - AluSx SINE Alu -9 303 1 814 185 72 5 chr10 3827465 3827660 -136489105 + MSTA LTR MaLR 1 208 -220 1975 107 66 19 chr10 3827689 3828008 -136488757 + MSTA LTR MaLR 95 428 0 522 278 99 61 chr10 3828085 3828719 -136488046 + L2 LINE L2 2646 3308 -5 960 112 0 0 chr10 3829379 3829513 -136487252 + AluSg SINE Alu 1 134 -176 2422 63 0 0 chr10 3829513 3829812 -136486953 + AluY SINE Alu 1 299 -12 1766 191 16 22 chr10 3829883 3830250 -136486515 + MLT1A1 LTR MaLR 1 365 0 617 165 61 9 chr10 3830608 3830723 -136486042 - AluJo SINE Alu -176 136 16 1941 134 3 0 chr10 3831010 3831293 -136485472 + AluSx SINE Alu 6 289 -23 2675 185 25 10 chr10 3831326 3831845 -136484920 + L1MA9 LINE L1 5783 6309 -3 25 31 0 0 chr10 3831848 3831880 -136484885 + AT_rich Low_complexity Low_complexity 1 32 0 1798 145 3 0 chr10 3832655 3833118 -136483647 + AluSx SINE Alu 7 470 0 209 143 0 41 chr10 3833122 3833171 -136483594 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 333 338 89 43 chr10 3834034 3834730 -136482035 - L2 LINE L2 -1303 2011 1284 863 98 0 38 chr10 3834842 3835026 -136481739 + (CCCTAA)n Simple_repeat Simple_repeat 2 178 0 191 143 63 48 chr10 3835045 3835108 -136481657 - L2 LINE L2 -2185 1129 1066 471 241 102 80 chr10 3835116 3835192 -136481573 - MLT1J LTR MaLR -4 507 434 1852 142 0 57 chr10 3835192 3835523 -136481242 - AluSx SINE Alu 0 312 1 471 241 102 80 chr10 3835523 3835720 -136481045 - MLT1J LTR MaLR -77 434 228 2354 77 3 0 chr10 3836236 3836536 -136480229 - AluSp SINE Alu -12 301 1 195 245 0 20 chr10 3836559 3836608 -136480157 - L2 LINE L2 0 3313 3266 247 266 13 0 chr10 3837417 3837496 -136479269 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 656 216 15 26 chr10 3837657 3838002 -136478763 + CT-rich Low_complexity Low_complexity 1 340 0 26 0 0 0 chr10 3838258 3838284 -136478481 + AT_rich Low_complexity Low_complexity 1 26 0 240 215 92 15 chr10 3838396 3838461 -136478304 - L2 LINE L2 -62 3251 3182 376 251 20 29 chr10 3838497 3838610 -136478155 + L1MC1 LINE L1 6216 6329 -15 1844 154 3 0 chr10 3838610 3838921 -136477844 + AluJb SINE Alu 1 312 0 376 251 20 29 chr10 3838921 3838936 -136477829 + L1MC1 LINE L1 6329 6343 -1 208 317 54 48 chr10 3839058 3839225 -136477540 - L2 LINE L2 -252 3020 2853 262 211 218 30 chr10 3839339 3839472 -136477293 - L1ME3 LINE L1 -2 6160 6003 462 266 68 34 chr10 3839751 3839928 -136476837 + MIR SINE MIR 33 215 -47 225 0 0 0 chr10 3840309 3840334 -136476431 + (T)n Simple_repeat Simple_repeat 1 25 0 1125 211 4 4 chr10 3841269 3841496 -136475269 + L1PA15 LINE L1 5939 6165 0 21 0 0 0 chr10 3842062 3842083 -136474682 + AT_rich Low_complexity Low_complexity 1 21 0 744 257 19 10 chr10 3842410 3842616 -136474149 + MIR SINE MIR 41 248 -14 2160 113 3 0 chr10 3842622 3842923 -136473842 - AluSx SINE Alu -10 302 1 341 228 0 38 chr10 3843483 3843562 -136473203 - MLT1G LTR MaLR -474 81 6 6250 166 17 8 chr10 3844052 3845393 -136471372 + L1PA8 LINE L1 4819 6166 -6 207 0 0 0 chr10 3845982 3846005 -136470760 + (T)n Simple_repeat Simple_repeat 1 23 0 1709 119 65 25 chr10 3847361 3847638 -136469127 - AluJo SINE Alu -24 288 1 2059 127 0 0 chr10 3848015 3848335 -136468430 - AluSq SINE Alu 0 320 1 2061 107 37 0 chr10 3849743 3850041 -136466724 - AluY SINE Alu -2 309 1 201 39 0 0 chr10 3850103 3850129 -136466636 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 285 319 80 0 chr10 3852521 3852634 -136464131 + MIR SINE MIR 119 240 -22 273 295 137 18 chr10 3852634 3852970 -136463795 - LTR16A LTR ERVL -4 446 71 22 0 0 0 chr10 3853617 3853639 -136463126 + AT_rich Low_complexity Low_complexity 1 22 0 1523 203 3 13 chr10 3854407 3854712 -136462053 - AluJo SINE Alu -10 302 1 641 313 127 17 chr10 3855737 3856156 -136460609 + MER69 DNA AcHobo 120 584 -642 * 1280 218 56 28 chr10 3856149 3856311 -136460454 + MER69 DNA AcHobo 2026 2182 -344 1846 167 0 3 chr10 3856311 3856611 -136460154 - AluJo SINE Alu -13 299 1 1280 218 56 28 chr10 3856611 3856874 -136459891 + MER69 DNA AcHobo 2182 2463 -63 372 302 54 0 chr10 3857521 3857650 -136459115 + L2 LINE L2 3173 3308 -5 463 311 178 68 chr10 3857689 3858269 -136458496 - L3 LINE CR1 -47 1530 856 2121 104 10 3 chr10 3858269 3858558 -136458207 - AluSg SINE Alu -19 291 1 463 311 178 68 chr10 3858558 3858692 -136458073 - L3 LINE CR1 -721 856 738 283 214 0 0 chr10 3858836 3858892 -136457873 - L2 LINE L2 -1 3312 3257 183 381 19 9 chr10 3858936 3859041 -136457724 - L3 LINE CR1 -989 588 483 782 267 37 31 chr10 3859069 3859391 -136457374 + MER5C DNA MER1_type 1 324 0 2085 115 44 0 chr10 3859447 3859743 -136457022 - AluSg SINE Alu -1 309 1 249 306 106 0 chr10 3859900 3859985 -136456780 + L2 LINE L2 3220 3313 0 3342 176 18 70 chr10 3861031 3861760 -136455005 + LTR8 LTR ERV1 1 691 0 2137 103 3 3 chr10 3862375 3862665 -136454100 - AluSc SINE Alu -19 290 1 397 35 0 221 chr10 3863445 3863531 -136453234 + MADE1 DNA Mariner 14 80 0 340 340 19 13 chr10 3863944 3864100 -136452665 - L2 LINE L2 -626 2688 2532 264 228 36 0 chr10 3864126 3864327 -136452438 + (TA)n Simple_repeat Simple_repeat 1 208 0 1751 167 37 0 chr10 3864338 3864638 -136452127 - AluSx SINE Alu -1 311 1 384 284 55 40 chr10 3864671 3864872 -136451893 - L2 LINE L2 -829 2485 2282 180 348 132 20 chr10 3865281 3865485 -136451280 - L2 LINE L2 -387 2927 2701 22 0 0 0 chr10 3865949 3865971 -136450794 + AT_rich Low_complexity Low_complexity 1 22 0 2096 115 18 0 chr10 3865978 3866264 -136450501 + AluSc SINE Alu 3 293 -16 229 300 108 33 chr10 3866771 3866891 -136449874 - MIR SINE MIR -74 188 60 25 0 0 0 chr10 3867768 3867793 -136448972 + AT_rich Low_complexity Low_complexity 1 25 0 341 210 25 76 chr10 3867928 3868047 -136448718 - Looper DNA T2_type -3 1555 1443 672 270 151 45 chr10 3868092 3868607 -136448158 + MLT1F1 LTR MaLR 1 565 -2 274 316 71 7 chr10 3868614 3868769 -136447996 - L1ME1 LINE L1 -4 6162 5998 1754 266 48 27 chr10 3868778 3869405 -136447360 - Looper DNA T2_type -782 776 137 442 204 79 130 chr10 3869402 3869474 -136447291 - Looper DNA T2_type -1343 215 141 * 1638 198 3 3 chr10 3869474 3869767 -136446998 - AluJb SINE Alu -19 293 1 442 204 79 130 chr10 3869767 3869910 -136446855 - Looper DNA T2_type -1417 141 11 1814 116 31 48 chr10 3870574 3870866 -136445899 + AluSx SINE Alu 8 294 -18 2368 78 7 0 chr10 3870866 3871162 -136445603 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 3871638 3871661 -136445104 + AT_rich Low_complexity Low_complexity 1 23 0 2249 90 13 13 chr10 3873105 3873416 -136443349 - AluSx SINE Alu -1 311 1 202 360 23 0 chr10 3874078 3874164 -136442601 + L3 LINE CR1 1073 1160 -417 396 169 0 0 chr10 3874395 3874460 -136442305 - MER46A DNA MER2_type -2 234 170 1135 158 0 6 chr10 3874568 3874745 -136442020 - MER46A DNA MER2_type -60 176 1 501 248 4 88 chr10 3874856 3875082 -136441683 - MIR SINE MIR -11 251 45 671 263 101 59 chr10 3875567 3876065 -136440700 + L2 LINE L2 2790 3305 -8 397 178 14 14 chr10 3876149 3876222 -136440543 + MER63 DNA MER1_type 661 733 -328 1014 160 0 0 chr10 3876383 3876560 -136440205 + AluSg/x SINE Alu 135 311 0 304 349 47 0 chr10 3876620 3876769 -136439996 - MIR SINE MIR -49 213 58 554 329 18 9 chr10 3877003 3877231 -136439534 + MIR SINE MIR 33 262 0 277 258 21 75 chr10 3877627 3877720 -136439045 - MIR SINE MIR -102 160 73 318 26 0 0 chr10 3877935 3877974 -136438791 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2196 112 0 0 chr10 3877980 3878267 -136438498 + AluSq SINE Alu 1 287 -26 4690 204 29 19 chr10 3878275 3879796 -136436969 - L1MA9 LINE L1 -28 6284 4747 1506 166 48 37 chr10 3879796 3880091 -136436674 - AluJb SINE Alu -14 298 1 4690 204 29 19 chr10 3880091 3880142 -136436623 - L1MA9 LINE L1 -1565 4747 4698 2095 130 0 0 chr10 3881853 3882145 -136434620 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 3882149 3882171 -136434594 + AT_rich Low_complexity Low_complexity 1 22 0 1962 146 0 22 chr10 3882428 3882744 -136434021 + AluSp SINE Alu 1 309 -4 228 269 26 39 chr10 3883665 3883743 -136433022 - MLT1F1-int LTR MaLR -508 863 787 420 309 34 11 chr10 3884140 3884318 -136432447 - MLT1F1-int LTR MaLR -882 489 308 1216 277 136 14 chr10 3884472 3884973 -136431792 - MLT1F1 LTR MaLR -5 562 1 184 292 62 15 chr10 3885455 3885520 -136431245 + L2 LINE L2 3208 3275 -38 1350 180 30 26 chr10 3886458 3886725 -136430040 - MLT1B LTR MaLR -122 268 1 2034 151 0 0 chr10 3887113 3887412 -136429353 - AluSx SINE Alu -12 300 2 839 113 48 0 chr10 3888130 3888254 -136428511 + AluSq/x SINE Alu 4 133 -180 204 97 0 0 chr10 3888257 3888288 -136428477 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 262 414 9 0 chr10 3889172 3889288 -136427477 + L2 LINE L2 3151 3267 -5 2343 100 0 0 chr10 3889323 3889623 -136427142 - AluSx SINE Alu -12 300 1 239 114 0 0 chr10 3892135 3892170 -136424595 - MIR SINE MIR -109 153 119 901 207 98 37 chr10 3892193 3892439 -136424326 - MIR SINE MIR -1 261 1 21 0 0 0 chr10 3894320 3894341 -136422424 + AT_rich Low_complexity Low_complexity 1 21 0 707 219 0 0 chr10 3894341 3894455 -136422310 - FLAM_A SINE Alu -19 114 1 412 294 82 39 chr10 3894467 3894822 -136421943 + L1ME4a LINE L1 5567 5933 -188 255 61 0 0 chr10 3894982 3895015 -136421750 + (TA)n Simple_repeat Simple_repeat 2 34 0 273 333 12 0 chr10 3895172 3895256 -136421509 - MIR SINE MIR -137 125 41 1724 132 81 31 chr10 3895762 3896119 -136420646 - THE1C LTR MaLR 0 375 1 491 298 103 86 chr10 3896572 3897085 -136419680 + L1MEd LINE L1 338 859 -5260 40 37 0 0 chr10 3897106 3897160 -136419605 + AT_rich Low_complexity Low_complexity 1 54 0 242 213 16 47 chr10 3897162 3897289 -136419476 + (TTA)n Simple_repeat Simple_repeat 3 125 0 2263 112 0 10 chr10 3897434 3897737 -136419028 - AluSc SINE Alu -9 300 1 585 313 160 22 chr10 3897737 3898293 -136418472 + L1MEd LINE L1 933 1565 -4745 265 321 21 7 chr10 3899090 3899230 -136417535 + L1MEd LINE L1 2126 2267 -3862 464 290 81 45 chr10 3899319 3899540 -136417225 + L1MEd LINE L1 2274 2502 -3627 251 349 116 0 chr10 3899586 3899758 -136417007 + MIR SINE MIR 71 262 0 2196 136 0 0 chr10 3901010 3901318 -136415447 + AluSx SINE Alu 1 308 -4 434 187 19 65 chr10 3901504 3901611 -136415154 - MER5B DNA MER1_type -74 104 3 29 78 0 0 chr10 3902597 3902661 -136414104 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 3902717 3902739 -136414026 + AT_rich Low_complexity Low_complexity 1 22 0 332 365 58 58 chr10 3902782 3903177 -136413588 - L2 LINE L2 0 3313 2919 294 320 62 46 chr10 3905860 3906054 -136410711 + L2 LINE L2 3117 3313 0 22 0 0 0 chr10 3906097 3906119 -136410646 + AT_rich Low_complexity Low_complexity 1 22 0 29 78 0 0 chr10 3906175 3906239 -136410526 + AT_rich Low_complexity Low_complexity 1 64 0 306 132 38 0 chr10 3907226 3907279 -136409486 + MER5B DNA MER1_type 3 57 -121 594 251 0 6 chr10 3907703 3907870 -136408895 - MER104 DNA Tc2 -1 179 14 200 371 80 25 chr10 3908265 3908502 -136408263 + L2 LINE L2 1792 2041 -1273 594 179 32 49 chr10 3909897 3910020 -136406745 - FLAM_C SINE Alu -19 124 4 370 265 160 6 chr10 3910858 3911039 -136405726 + L2 LINE L2 3102 3310 -3 23 0 0 0 chr10 3911177 3911200 -136405565 + AT_rich Low_complexity Low_complexity 1 23 0 2226 317 84 34 chr10 3911690 3913065 -136403700 - L2 LINE L2 -811 2503 1059 262 254 82 9 chr10 3913068 3913178 -136403587 + HAL1 LINE L1 839 956 -1551 203 374 61 0 chr10 3913645 3913744 -136403021 + L2 LINE L2 3106 3210 -62 805 263 33 37 chr10 3913761 3914085 -136402680 + L1ME LINE L1 4960 5281 -883 1440 201 0 42 chr10 3914085 3914393 -136402372 - AluJo SINE Alu -17 295 1 805 263 33 37 chr10 3914393 3914577 -136402188 + L1ME LINE L1 5281 5464 -700 764 124 0 148 chr10 3915227 3915437 -136401328 - AluSq SINE Alu -134 179 1 447 371 35 22 chr10 3915488 3915717 -136401048 - MIR SINE MIR -12 250 19 988 200 5 19 chr10 3917137 3917347 -136399418 - Tigger5 DNA MER2_type -63 2260 2054 1791 119 10 34 chr10 3917449 3917744 -136399021 - AluSq SINE Alu -3 310 23 1273 178 57 0 chr10 3917746 3917993 -136398772 + Tigger5 DNA MER2_type 2063 2323 0 239 240 13 0 chr10 3918001 3918076 -136398689 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 1640 184 35 6 chr10 3918133 3918476 -136398289 - MSTA LTR MaLR 0 428 76 228 79 26 0 chr10 3918476 3918514 -136398251 - MSTB LTR MaLR -314 114 76 323 88 18 0 chr10 3918624 3918681 -136398084 - MSTB LTR MaLR -310 118 61 * 549 150 20 0 chr10 3918672 3918772 -136397993 - MSTB LTR MaLR -324 102 1 24 53 0 0 chr10 3919524 3919562 -136397203 + AT_rich Low_complexity Low_complexity 1 38 0 2089 88 3 52 chr10 3920590 3920896 -136395869 + AluSp SINE Alu 1 291 -22 1022 163 113 0 chr10 3921454 3921675 -136395090 + L1PA16 LINE L1 5921 6166 0 331 291 10 0 chr10 3922225 3922328 -136394437 + (TA)n Simple_repeat Simple_repeat 1 104 0 206 379 129 9 chr10 3922677 3922793 -136393972 + L2 LINE L2 3142 3271 -1 275 365 139 21 chr10 3922932 3923220 -136393545 + L3 LINE CR1 1160 1481 -96 2207 113 7 0 chr10 3923226 3923518 -136393247 + AluSx SINE Alu 1 294 -18 289 325 60 17 chr10 3924160 3924277 -136392488 - L2 LINE L2 0 3313 3192 1506 201 34 17 chr10 3924281 3924684 -136392081 + L1MB3 LINE L1 5271 5670 -513 743 178 20 7 chr10 3924687 3924833 -136391932 + FRAM SINE Alu 1 145 -31 1831 206 91 2 chr10 3924856 3925328 -136391437 + L1MB3 LINE L1 5662 6175 -8 270 271 98 57 chr10 3925446 3925568 -136391197 - L2 LINE L2 -243 3029 2903 1039 128 137 0 chr10 3926379 3926583 -136390182 + L1M2 LINE L1 5558 5789 -502 232 203 0 17 chr10 3927363 3927422 -136389343 + (TA)n Simple_repeat Simple_repeat 1 58 0 186 43 0 0 chr10 3927449 3927461 -136389304 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 3927461 3927484 -136389281 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 143 0 0 chr10 3927551 3927586 -136389179 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 747 269 12 64 chr10 3928140 3928389 -136388376 + L2 LINE L2 3078 3313 0 2317 113 0 0 chr10 3929892 3930202 -136386563 - AluSx SINE Alu 0 312 3 206 118 0 0 chr10 3930336 3930370 -136386395 + (A)n Simple_repeat Simple_repeat 1 34 0 296 297 80 14 chr10 3930393 3930531 -136386234 + MIR SINE MIR 82 228 -34 362 332 98 4 chr10 3931184 3931458 -136385307 + HsTC2 DNA Tc2 578 877 -1021 2168 109 0 0 chr10 3931635 3931972 -136384793 - AluSq SINE Alu 0 337 1 208 246 53 0 chr10 3934207 3934264 -136382501 + MIR SINE MIR 108 167 -95 264 250 50 70 chr10 3934285 3934385 -136382380 + L2 LINE L2 3211 3308 -5 238 337 10 40 chr10 3934819 3934920 -136381845 + L2 LINE L2 3150 3247 -25 2009 128 59 9 chr10 3935584 3935905 -136380860 - MER1B DNA MER1_type 0 337 1 2099 100 4 0 chr10 3936945 3937258 -136379507 + AluSg SINE Alu 1 314 0 477 312 69 26 chr10 3938734 3938923 -136377842 + MIR SINE MIR 2 198 -64 1433 228 39 15 chr10 3939223 3939561 -136377204 - MSTD LTR MaLR -50 346 1 1459 129 133 33 chr10 3940311 3940582 -136376183 - AluSg SINE Alu -12 298 1 1940 162 0 0 chr10 3941355 3941657 -136375108 + AluSx SINE Alu 6 307 -5 221 371 0 53 chr10 3942896 3943028 -136373737 - MIR3 SINE MIR -10 198 74 2117 98 7 30 chr10 3943655 3943960 -136372805 - AluSg SINE Alu -1 309 12 241 231 19 0 chr10 3944593 3944645 -136372120 + CT-rich Low_complexity Low_complexity 1 53 0 240 145 26 26 chr10 3944651 3944727 -136372038 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 2417 65 0 3 chr10 3946609 3946903 -136369862 - AluY SINE Alu -18 293 1 2238 122 0 0 chr10 3947419 3947715 -136369050 + AluSx SINE Alu 1 296 -16 353 320 113 34 chr10 3950223 3950638 -136366127 + L1MEd LINE L1 440 887 -5232 22 0 0 0 chr10 3950960 3950982 -136365783 + AT_rich Low_complexity Low_complexity 1 22 0 205 209 47 35 chr10 3951059 3951139 -136365626 + (TA)n Simple_repeat Simple_repeat 1 82 0 1938 151 176 14 chr10 3951139 3951503 -136365262 + MSTA LTR MaLR 5 427 -1 287 308 92 64 chr10 3951508 3951834 -136364931 + L1MB5 LINE L1 5323 5660 -461 201 263 0 0 chr10 3952203 3952260 -136364505 + A-rich Low_complexity Low_complexity 1 57 0 838 259 39 104 chr10 3952719 3953247 -136363518 + L1ME3A LINE L1 5288 5772 -398 1857 120 8 0 chr10 3953247 3953506 -136363259 - AluSx SINE Alu -51 261 1 838 259 39 104 chr10 3953506 3953591 -136363174 + L1ME3A LINE L1 5772 5861 -309 2180 99 3 3 chr10 3953913 3954229 -136362536 - AluSx SINE Alu 0 316 1 1360 216 17 3 chr10 3954326 3954613 -136362152 + L1MB5 LINE L1 5884 6174 0 357 24 0 0 chr10 3955025 3955067 -136361698 + (CA)n Simple_repeat Simple_repeat 2 43 0 203 235 0 15 chr10 3955098 3955166 -136361599 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 288 274 0 24 chr10 3955167 3955251 -136361514 + L1MC4 LINE L1 6614 6695 -1347 1040 115 7 7 chr10 3955865 3956013 -136360752 + AluSq/x SINE Alu 1 148 -165 294 234 16 0 chr10 3956165 3956229 -136360536 - AluJ/FLAM SINE Alu -237 65 1 21 36 0 0 chr10 3956233 3956261 -136360504 + AT_rich Low_complexity Low_complexity 1 28 0 1186 225 58 36 chr10 3956346 3956675 -136360090 + MLT1A2 LTR MaLR 21 356 -18 344 268 71 9 chr10 3956861 3956973 -136359792 + MER69 DNA AcHobo 240 358 -868 1729 240 63 58 chr10 3957380 3958370 -136358395 + MER69 DNA AcHobo 1451 2448 -78 1945 147 3 3 chr10 3958370 3958663 -136358102 - AluSx SINE Alu -19 293 1 1729 240 63 58 chr10 3958663 3958733 -136358032 + MER69 DNA AcHobo 2448 2516 -10 1511 240 170 23 chr10 3959879 3960707 -136356058 + Charlie2 DNA MER1_type 1870 2819 -43 1984 134 14 0 chr10 3961078 3961399 -136355366 - AluSx SINE Alu 0 325 1 198 71 0 0 chr10 3961442 3961470 -136355295 + (CA)n Simple_repeat Simple_repeat 2 29 0 382 335 29 50 chr10 3964029 3964271 -136352494 + MIR SINE MIR 9 245 -17 1779 132 50 21 chr10 3964693 3964974 -136351791 + AluSx SINE Alu 1 289 -23 255 173 0 0 chr10 3966079 3966131 -136350634 - LTR66 LTR ERVL -155 455 404 453 141 0 0 chr10 3966134 3966207 -136350558 + (TA)n Simple_repeat Simple_repeat 1 74 0 273 57 0 0 chr10 3966207 3966242 -136350523 + (CA)n Simple_repeat Simple_repeat 2 36 0 2057 112 11 0 chr10 3966246 3966532 -136350233 - AluSq SINE Alu -24 289 1 26 50 0 0 chr10 3967122 3967162 -136349603 + AT_rich Low_complexity Low_complexity 1 40 0 2380 56 0 11 chr10 3971258 3971602 -136345163 - AluY SINE Alu 0 341 1 310 255 113 0 chr10 3972910 3973016 -136343749 + MIR3 SINE MIR 91 208 0 25 51 0 0 chr10 3973605 3973644 -136343121 + AT_rich Low_complexity Low_complexity 1 39 0 1934 152 40 0 chr10 3974352 3974648 -136342117 - AluSx SINE Alu -4 308 1 1983 174 33 12 chr10 3975997 3976558 -136340207 + L1P5 LINE L1 4977 5555 -601 221 0 0 33 chr10 3976870 3976900 -136339865 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2119 92 20 31 chr10 3976903 3977196 -136339569 - AluSq SINE Alu -23 290 1 1213 195 77 49 chr10 3977472 3977759 -136339006 + AluJb SINE Alu 17 311 -1 1042 83 0 0 chr10 3978099 3978231 -136338534 + AluSp/q SINE Alu 162 293 -20 189 217 19 38 chr10 3978382 3978539 -136338226 + (TA)n Simple_repeat Simple_repeat 2 155 0 700 255 45 25 chr10 3978579 3978779 -136337986 - MER20 DNA MER1_type 0 219 16 248 320 13 0 chr10 3980036 3980111 -136336654 - L2 LINE L2 -376 2938 2863 1792 213 11 8 chr10 3980838 3981200 -136335565 - MLT1A1 LTR MaLR -1 364 2 2099 139 7 0 chr10 3981368 3981678 -136335087 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 3981916 3981944 -136334821 + AT_rich Low_complexity Low_complexity 1 28 0 296 127 18 0 chr10 3983934 3983989 -136332776 + GA-rich Low_complexity Low_complexity 4 59 0 248 233 0 42 chr10 3984058 3984178 -136332587 + GA-rich Low_complexity Low_complexity 3 117 0 * 514 206 5 33 chr10 3984151 3984335 -136332430 + G-rich Low_complexity Low_complexity 1 179 0 468 145 15 30 chr10 3984372 3984503 -136332262 + GA-rich Low_complexity Low_complexity 4 132 0 495 279 65 30 chr10 3984973 3985174 -136331591 - MER3 DNA MER1_type 0 209 2 189 0 0 0 chr10 3986546 3986567 -136330198 + (CTA)n Simple_repeat Simple_repeat 1 21 0 2137 122 0 3 chr10 3986579 3986882 -136329883 + AluSx SINE Alu 1 302 -10 783 153 0 0 chr10 3986888 3987006 -136329759 + FLAM_C SINE Alu 1 118 -15 180 158 0 0 chr10 3987615 3987653 -136329112 + (CA)n Simple_repeat Simple_repeat 1 38 0 1967 123 36 10 chr10 3987814 3988115 -136328650 + AluSg SINE Alu 1 309 -1 302 303 48 35 chr10 3988175 3988320 -136328445 + MIR SINE MIR 50 196 -66 750 273 86 51 chr10 3988572 3989000 -136327765 - MLT1J1 LTR MaLR 0 446 4 205 308 110 11 chr10 3989095 3989186 -136327579 + MIR SINE MIR 100 199 -63 214 294 119 40 chr10 3989304 3989430 -136327335 + MIR SINE MIR 8 143 -119 2309 117 0 0 chr10 3990700 3991008 -136325757 + AluSc SINE Alu 1 308 -1 200 282 111 60 chr10 3992104 3992221 -136324544 - MIR SINE MIR -120 142 20 228 285 76 83 chr10 3993309 3993453 -136323312 - MIR SINE MIR -39 223 81 395 220 37 37 chr10 3993984 3994093 -136322672 - Charlie8 DNA MER1_type -2247 170 62 579 211 0 0 chr10 3995199 3995313 -136321452 - L1MA5A LINE L1 -5 6292 6179 912 111 0 15 chr10 3996312 3996447 -136320318 + AluSq/x SINE Alu 1 133 -179 23 0 0 0 chr10 3997389 3997412 -136319353 + AT_rich Low_complexity Low_complexity 1 23 0 860 268 7 48 chr10 3997528 3997819 -136318946 + L1M4 LINE L1 4047 4325 -1821 1182 102 0 0 chr10 3997822 3997969 -136318796 + AluSq/x SINE Alu 6 152 -161 459 0 0 0 chr10 3997971 3998022 -136318743 + (TA)n Simple_repeat Simple_repeat 1 51 0 2575 226 32 26 chr10 3998036 3998677 -136318088 + L1M4 LINE L1 4318 4966 -1180 1605 113 13 17 chr10 3998677 3998784 -136317981 - MER30 DNA MER1_type 0 230 124 2372 87 0 0 chr10 3998784 3999082 -136317683 + AluSg SINE Alu 1 298 -12 1605 113 13 17 chr10 3999082 3999205 -136317560 - MER30 DNA MER1_type -106 124 1 2575 226 32 26 chr10 3999205 3999306 -136317459 + L1M4 LINE L1 4966 5065 -1081 2036 148 0 0 chr10 3999902 4000200 -136316565 + AluSx SINE Alu 1 298 -14 26 30 0 0 chr10 4000833 4000866 -136315899 + AT_rich Low_complexity Low_complexity 1 33 0 2927 63 0 0 chr10 4002066 4002413 -136314352 + L1PA8 LINE L1 5822 6168 -4 1607 154 91 58 chr10 4002779 4003142 -136313623 - THE1C LTR MaLR 0 375 1 349 207 27 0 chr10 4005018 4005129 -136311636 + G-rich Low_complexity Low_complexity 2 115 0 180 298 99 25 chr10 4005637 4005758 -136311007 + L2 LINE L2 2986 3115 -157 1541 205 7 4 chr10 4007987 4008285 -136308480 - AluJb SINE Alu 0 301 3 21 0 0 0 chr10 4008412 4008433 -136308332 + AT_rich Low_complexity Low_complexity 1 21 0 849 147 6 51 chr10 4008622 4008754 -136308011 - L1PA16 LINE L1 0 6166 6040 1546 203 7 3 chr10 4008754 4009055 -136307710 - AluJo SINE Alu -10 302 1 849 147 6 51 chr10 4009055 4009078 -136307687 - L1PA16 LINE L1 -126 6040 6018 217 339 46 39 chr10 4009078 4009208 -136307557 - MIR3 SINE MIR -65 143 13 2103 120 3 0 chr10 4009208 4009500 -136307265 - AluSx SINE Alu -19 293 1 1022 51 17 34 chr10 4009684 4009859 -136306906 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 1717 151 7 11 chr10 4009861 4010140 -136306625 - AluJb SINE Alu -34 278 1 199 227 89 0 chr10 4010240 4010279 -136306486 + MIR SINE MIR 106 115 -93 392 0 21 0 chr10 4010279 4010327 -136306438 + (TAA)n Simple_repeat Simple_repeat 2 50 0 199 227 89 0 chr10 4010327 4010364 -136306401 + MIR SINE MIR 115 147 -61 213 304 163 11 chr10 4010488 4010580 -136306185 - L2 LINE L2 -12 3301 3196 2020 116 3 27 chr10 4010776 4011077 -136305688 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 4011083 4011107 -136305658 + AT_rich Low_complexity Low_complexity 1 24 0 237 218 135 113 chr10 4011107 4011240 -136305525 - L2 LINE L2 -452 2862 2727 2104 121 7 3 chr10 4011747 4012044 -136304721 + AluSg SINE Alu 1 298 -12 1559 251 70 13 chr10 4012075 4012605 -136304160 - MER69 DNA AcHobo -8 2518 1959 950 221 43 59 chr10 4012597 4012791 -136303974 - MER69 DNA AcHobo -753 1773 1584 * 1645 164 27 17 chr10 4012791 4013090 -136303675 - AluJo SINE Alu -10 302 1 950 221 43 59 chr10 4013090 4013217 -136303548 - MER69 DNA AcHobo -942 1584 1457 277 214 101 22 chr10 4013279 4013368 -136303397 - MER69 DNA AcHobo -1032 194 99 2051 134 0 3 chr10 4013578 4013883 -136302882 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 4013886 4013907 -136302858 + AT_rich Low_complexity Low_complexity 1 21 0 2318 105 0 6 chr10 4014667 4014982 -136301783 - AluSq SINE Alu 0 313 1 1820 157 13 13 chr10 4017375 4017681 -136299084 - AluSx SINE Alu -6 306 1 268 316 69 69 chr10 4017816 4017990 -136298775 + MIR SINE MIR 39 212 -50 4311 126 21 11 chr10 4018171 4018800 -136297965 - MER41B LTR ERV1 0 635 1 423 282 8 8 chr10 4019006 4019123 -136297642 - Charlie8 DNA MER1_type -2208 209 93 1699 138 18 90 chr10 4020318 4020470 -136296295 + AluJo SINE Alu 3 120 -192 2176 120 0 7 chr10 4020470 4020778 -136295987 + AluSg SINE Alu 1 306 -4 1699 138 18 90 chr10 4020778 4020959 -136295806 + AluJo SINE Alu 120 312 0 1776 148 24 10 chr10 4021772 4022069 -136294696 - AluSx SINE Alu -11 301 1 504 0 0 0 chr10 4023374 4023430 -136293335 + (TAA)n Simple_repeat Simple_repeat 2 57 0 2070 120 23 3 chr10 4024455 4024754 -136292011 - AluSx SINE Alu -7 305 1 2119 136 7 3 chr10 4025714 4026024 -136290741 + AluSq SINE Alu 1 311 -2 693 241 282 19 chr10 4026244 4026758 -136290007 + LTR50 LTR ERVL 137 785 -10 2712 113 8 3 chr10 4027030 4027392 -136289373 + THE1B LTR MaLR 1 364 0 466 333 34 19 chr10 4027442 4027706 -136289059 + LTR16A LTR ERVL 104 371 -79 2903 169 62 108 chr10 4027911 4028460 -136288305 + LTR8A LTR ERV1 2 508 -219 1988 149 10 3 chr10 4028460 4028768 -136287997 + AluSx SINE Alu 1 310 -2 2903 169 62 108 chr10 4028768 4028979 -136287786 + LTR8A LTR ERV1 508 727 0 1266 256 49 23 chr10 4029361 4029708 -136287057 + MLT1A2 LTR MaLR 1 356 -18 393 301 127 28 chr10 4030035 4030248 -136286517 - MIR SINE MIR 0 262 29 644 254 0 7 chr10 4030799 4030941 -136285824 + MER8 DNA MER2_type 99 239 0 2270 115 0 3 chr10 4031021 4031389 -136285376 - AluSx SINE Alu 0 369 3 329 277 84 34 chr10 4031724 4031843 -136284922 - MIR SINE MIR -1 261 137 2068 135 7 0 chr10 4032802 4033105 -136283660 + AluSx SINE Alu 1 305 -7 238 309 178 13 chr10 4033255 4033407 -136283358 + MER5A DNA MER1_type 13 189 0 439 305 32 13 chr10 4033928 4034082 -136282683 - MIR SINE MIR -85 177 21 2091 143 0 0 chr10 4034638 4034939 -136281826 + AluSp SINE Alu 1 301 -12 1139 132 11 0 chr10 4034939 4035113 -136281652 + AluSq SINE Alu 134 309 -4 608 264 22 0 chr10 4037460 4037638 -136279127 + MER45 DNA AcHobo 3 184 -856 754 202 47 114 chr10 4037792 4038089 -136278676 - MLT1A2 LTR MaLR -74 300 24 398 274 122 16 chr10 4038177 4038498 -136278267 + L1ME4a LINE L1 5764 6118 -3 233 291 254 8 chr10 4038956 4039090 -136277675 + MIR3 SINE MIR 37 203 -5 2154 142 0 0 chr10 4039119 4039422 -136277343 - AluSx SINE Alu -9 303 1 23 0 0 0 chr10 4039594 4039617 -136277148 + AT_rich Low_complexity Low_complexity 1 23 0 1257 176 118 123 chr10 4039654 4040070 -136276695 + MLT2D LTR ERVL 1 414 0 569 184 18 28 chr10 4041072 4041181 -136275584 + AluJo SINE Alu 2 109 -203 990 149 54 0 chr10 4041268 4041436 -136275329 + AluJo SINE Alu 110 286 -26 541 332 25 20 chr10 4041800 4042002 -136274763 + MIR SINE MIR 12 214 -48 243 273 87 40 chr10 4042122 4042272 -136274493 - MIR SINE MIR -4 258 102 340 295 0 27 chr10 4043494 4043606 -136273159 - MIR SINE MIR -2 260 152 2196 109 0 20 chr10 4044588 4044891 -136271874 - AluSg SINE Alu -13 297 1 4113 156 13 15 chr10 4044953 4045639 -136271126 - L1MA6 LINE L1 0 6300 5616 1828 71 8 4 chr10 4045764 4046003 -136270762 - AluY SINE Alu -16 295 56 582 296 90 31 chr10 4046294 4046649 -136270116 - L1ME4a LINE L1 -238 5883 5508 1216 243 114 39 chr10 4046965 4047422 -136269343 + MLT2B1 LTR ERVL 20 510 -10 201 39 0 0 chr10 4047820 4047846 -136268919 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2162 153 23 8 chr10 4050999 4051353 -136265412 - THE1B LTR MaLR -1 363 5 244 295 121 76 chr10 4051906 4052354 -136264411 - L2 LINE L2 0 3313 2846 237 263 152 0 chr10 4052406 4052505 -136264260 + L2 LINE L2 2671 2784 -530 221 306 126 53 chr10 4052541 4052842 -136263923 + L2 LINE L2 2991 3313 0 1227 316 93 51 chr10 4052877 4053626 -136263139 - L2 LINE L2 -683 2631 1851 252 299 95 7 chr10 4054103 4054240 -136262525 + L1ME LINE L1 5514 5662 -502 528 313 83 25 chr10 4055129 4055407 -136261358 + HAL1 LINE L1 793 1086 -1421 275 224 59 0 chr10 4055462 4055547 -136261218 - L1MC2 LINE L1 -9 6335 6246 2371 63 10 20 chr10 4055610 4055911 -136260854 + AluY SINE Alu 5 302 -9 1272 242 72 14 chr10 4056017 4056529 -136260236 + L1M4 LINE L1 2965 3506 -2640 4422 206 154 57 chr10 4056554 4056611 -136260154 - L1MCa LINE L1 -4489 1937 1887 1635 166 7 18 chr10 4056611 4056888 -136259877 - AluJo SINE Alu 0 312 39 4422 206 154 57 chr10 4056888 4058563 -136258202 - L1MCa LINE L1 -4539 1887 37 479 282 136 84 chr10 4058624 4059138 -136257627 + HAL1 LINE L1 1088 1628 -879 180 176 0 0 chr10 4059637 4059671 -136257094 + GA-rich Low_complexity Low_complexity 3 36 0 674 178 18 6 chr10 4059684 4059853 -136256912 + GA-rich Low_complexity Low_complexity 1 171 0 661 184 21 16 chr10 4059868 4060300 -136256465 + GA-rich Low_complexity Low_complexity 1 434 0 387 0 0 0 chr10 4061338 4061381 -136255384 + (TA)n Simple_repeat Simple_repeat 2 44 0 183 42 0 0 chr10 4061381 4061405 -136255360 + (TG)n Simple_repeat Simple_repeat 2 25 0 2222 126 0 3 chr10 4062467 4062777 -136253988 + AluSx SINE Alu 1 309 -3 190 273 13 39 chr10 4063081 4063158 -136253607 + MIR SINE MIR 62 136 -126 2012 137 3 0 chr10 4063577 4063862 -136252903 - AluSx SINE Alu -26 286 1 4254 174 24 1 chr10 4064916 4065721 -136251044 + Tigger1 DNA MER2_type 1 823 -1595 3127 135 107 0 chr10 4065724 4066293 -136250472 + Tigger1 DNA MER2_type 1789 2418 0 2491 58 0 13 chr10 4066579 4066887 -136249878 + AluY SINE Alu 1 304 -7 347 272 46 48 chr10 4067187 4067515 -136249250 - MLT1G LTR MaLR -252 343 17 2084 115 0 11 chr10 4067710 4068034 -136248731 + AluSx SINE Alu 1 321 0 2213 185 85 39 chr10 4068284 4068792 -136247973 + LTR26B LTR ERV1 1 531 0 408 169 159 104 chr10 4068872 4069048 -136247717 + MLT1E1 LTR MaLR 1 191 -433 4505 104 1 65 chr10 4069048 4069609 -136247156 - LTR8 LTR ERV1 0 691 187 1976 121 32 4 chr10 4069609 4069889 -136246876 + AluSx SINE Alu 1 288 -24 4505 104 1 65 chr10 4069889 4070065 -136246700 - LTR8 LTR ERV1 -504 187 1 408 169 159 104 chr10 4070065 4070089 -136246676 + MLT1E1 LTR MaLR 191 212 -412 1560 201 64 54 chr10 4070908 4071126 -136245639 - LTR54 LTR ERV1 -3 507 293 3143 128 91 0 chr10 4071126 4071634 -136245131 + MER41C LTR ERV1 1 554 0 1560 201 64 54 chr10 4071634 4071917 -136244848 - LTR54 LTR ERV1 -217 293 1 2576 187 60 11 chr10 4072775 4073341 -136243424 + LTR51 LTR ERV1 1 594 -77 243 0 0 0 chr10 4074226 4074253 -136242512 + (A)n Simple_repeat Simple_repeat 1 27 0 320 226 15 22 chr10 4074454 4074591 -136242174 + (CA)n Simple_repeat Simple_repeat 1 136 0 23 0 0 0 chr10 4076039 4076062 -136240703 + AT_rich Low_complexity Low_complexity 1 23 0 403 274 101 58 chr10 4076200 4076477 -136240288 - L2 LINE L2 -3 3310 3022 526 189 18 0 chr10 4076501 4076612 -136240153 + MSTC LTR MaLR 316 428 0 272 143 0 0 chr10 4076674 4076716 -136240049 - 5S rRNA rRNA -79 42 1 2288 318 88 32 chr10 4076731 4078156 -136238609 - L2 LINE L2 -749 2565 1062 264 257 80 9 chr10 4078158 4078271 -136238494 + HAL1 LINE L1 836 956 -1551 203 374 61 0 chr10 4078738 4078837 -136237928 + L2 LINE L2 3106 3210 -62 832 287 43 30 chr10 4078854 4079178 -136237587 + L1ME3A LINE L1 4960 5278 -884 1475 202 0 39 chr10 4079178 4079485 -136237280 - AluJo SINE Alu -17 295 1 832 287 43 30 chr10 4079485 4079977 -136236788 + L1ME3A LINE L1 5278 5789 -373 500 230 49 75 chr10 4080010 4080236 -136236529 + L1ME3A LINE L1 5942 6161 -9 27 0 0 0 chr10 4080881 4080908 -136235857 + AT_rich Low_complexity Low_complexity 1 27 0 190 269 239 0 chr10 4081387 4081454 -136235311 - L3b LINE CR1 -71 1512 1430 3150 67 24 40 chr10 4081999 4082450 -136234315 + MLT2A1 LTR ERVL 1 444 0 1294 250 118 34 chr10 4082557 4082975 -136233790 - L1MCc LINE L1 -4889 1534 1188 1272 211 157 59 chr10 4082975 4083486 -136233279 - MER34B LTR ERV1 0 565 5 1294 250 118 34 chr10 4083486 4083928 -136232837 - L1MCc LINE L1 -5235 1188 784 838 243 57 24 chr10 4084183 4084553 -136232212 - L1MCc LINE L1 -6025 398 17 280 283 130 22 chr10 4084872 4085102 -136231663 - L1M2 LINE L1 -744 5556 5302 201 39 0 0 chr10 4085243 4085269 -136231496 + (T)n Simple_repeat Simple_repeat 1 26 0 339 326 22 17 chr10 4085630 4085660 -136231105 - L1M4 LINE L1 -1089 5057 5029 1824 108 93 0 chr10 4085660 4085929 -136230836 - AluSx SINE Alu -18 294 1 339 326 22 17 chr10 4085929 4086076 -136230689 - L1M4 LINE L1 -1117 5029 4879 843 323 87 40 chr10 4086097 4086958 -136229807 - L1M4 LINE L1 -1331 4815 3914 468 305 316 21 chr10 4087024 4087541 -136229224 + L2 LINE L2 1132 1495 -1819 2149 127 0 3 chr10 4087541 4087841 -136228924 - AluSx SINE Alu -13 299 1 468 305 316 21 chr10 4087841 4087906 -136228859 + L2 LINE L2 1495 1886 -1428 1280 261 177 50 chr10 4087920 4088747 -136228018 + L2 LINE L2 2140 3109 -204 2263 102 0 3 chr10 4088747 4089050 -136227715 - AluSx SINE Alu -10 302 1 1280 261 177 50 chr10 4089050 4089261 -136227504 + L2 LINE L2 3109 3292 -21 675 331 38 44 chr10 4089300 4089823 -136226942 - L1M4 LINE L1 -2375 3771 3252 1908 192 67 23 chr10 4089905 4090426 -136226339 + L1MB3 LINE L1 5636 6179 -4 300 279 84 45 chr10 4090635 4090789 -136225976 - L1M4 LINE L1 -3146 3000 2841 293 122 0 0 chr10 4090881 4090930 -136225835 - L1MA9 LINE L1 -38 6274 6226 2934 147 67 7 chr10 4091048 4091600 -136225165 - LTR1 LTR ERV1 0 785 201 229 302 0 73 chr10 4091668 4091860 -136224905 + (TCTCTG)n Simple_repeat Simple_repeat 2 179 0 1087 155 57 16 chr10 4091877 4092122 -136224643 - LTR1 LTR ERV1 -530 255 1 294 272 29 10 chr10 4092149 4092252 -136224513 - L1MA9 LINE L1 -164 6148 6044 25 51 0 0 chr10 4092373 4092412 -136224353 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr10 4095137 4095177 -136221588 + AT_rich Low_complexity Low_complexity 1 40 0 2036 139 7 0 chr10 4095177 4095486 -136221279 - AluSx SINE Alu -1 311 1 2186 125 3 0 chr10 4095623 4095928 -136220837 + AluSg SINE Alu 1 306 -4 3492 251 54 4 chr10 4097300 4098300 -136218465 - L1M4 LINE L1 -1306 4840 3791 262 143 13 156 chr10 4098297 4098347 -136218418 + L1MCa LINE L1 1301 1338 -5088 * 1265 222 39 52 chr10 4098347 4098479 -136218286 + AluJo SINE Alu 1 133 -169 2371 89 0 3 chr10 4098479 4098805 -136217960 + AluSc SINE Alu 1 309 0 1265 222 39 52 chr10 4098805 4098978 -136217787 + AluJo SINE Alu 133 302 0 262 143 13 156 chr10 4098978 4099004 -136217761 + L1MCa LINE L1 1338 1366 -5060 828 201 29 29 chr10 4099027 4099231 -136217534 - L1MCa LINE L1 -6189 237 34 2033 125 7 3 chr10 4099270 4099559 -136217206 - AluSx SINE Alu -22 290 1 288 274 0 24 chr10 4100173 4100257 -136216508 - L1MC4 LINE L1 -1347 6695 6614 203 235 0 15 chr10 4100258 4100326 -136216439 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 357 24 0 0 chr10 4100357 4100399 -136216366 + (TG)n Simple_repeat Simple_repeat 2 43 0 1360 216 17 3 chr10 4100811 4101098 -136215667 - L1MB5 LINE L1 0 6174 5884 2181 99 3 3 chr10 4101195 4101511 -136215254 + AluSx SINE Alu 1 316 0 838 259 39 104 chr10 4101832 4101917 -136214848 - L1ME3A LINE L1 -309 5861 5772 1857 120 8 0 chr10 4101917 4102176 -136214589 + AluSx SINE Alu 1 261 -51 838 259 39 104 chr10 4102176 4102704 -136214061 - L1ME3A LINE L1 -398 5772 5288 201 263 0 0 chr10 4103164 4103221 -136213544 + T-rich Low_complexity Low_complexity 1 57 0 287 322 80 52 chr10 4103590 4103916 -136212849 - L1MB5 LINE L1 -544 5618 5323 1938 151 176 14 chr10 4103921 4104285 -136212480 - MSTA LTR MaLR -1 427 5 205 209 47 35 chr10 4104285 4104365 -136212400 + (TA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 4104442 4104464 -136212301 + AT_rich Low_complexity Low_complexity 1 22 0 353 320 113 34 chr10 4104786 4105201 -136211564 - L1MEd LINE L1 -5232 887 440 2238 122 0 0 chr10 4107709 4108005 -136208760 - AluSx SINE Alu -16 296 1 2417 65 0 3 chr10 4108521 4108815 -136207950 + AluY SINE Alu 1 293 -18 240 145 26 26 chr10 4110697 4110773 -136205992 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 241 231 19 0 chr10 4110779 4110831 -136205934 + GA-rich Low_complexity Low_complexity 1 53 0 240 255 85 32 chr10 4110913 4111007 -136205758 + LTR67 LTR ERVL 457 555 -2 2209 81 7 30 chr10 4111464 4111761 -136205004 + AluSc SINE Alu 12 301 -8 212 253 84 12 chr10 4111765 4111848 -136204917 + MIR SINE MIR 150 238 -24 337 204 43 21 chr10 4111890 4111983 -136204782 + MLT1J LTR MaLR 105 199 -312 21 71 0 0 chr10 4113771 4113813 -136202952 + AT_rich Low_complexity Low_complexity 1 42 0 605 201 45 124 chr10 4113871 4114274 -136202491 - HAL1 LINE L1 -1313 1194 824 231 90 154 64 chr10 4114293 4114371 -136202394 - HAL1 LINE L1 -2273 234 150 5018 178 30 5 chr10 4114379 4114918 -136201847 + L1PB4 LINE L1 4621 5145 -1011 303 28 0 0 chr10 4114918 4114954 -136201811 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5018 178 30 5 chr10 4114954 4115857 -136200908 + L1PB4 LINE L1 5145 6101 -55 601 192 26 40 chr10 4115856 4116007 -136200758 - L1MB5 LINE L1 -794 5352 5204 * 267 79 0 0 chr10 4116096 4116134 -136200631 + L1PB4 LINE L1 6112 6149 -7 1801 127 9 67 chr10 4116773 4117103 -136199662 + AluSx SINE Alu 1 311 -1 207 239 0 22 chr10 4117903 4117949 -136198816 - MIR SINE MIR -187 75 31 2254 112 0 0 chr10 4118663 4118958 -136197807 + AluSx SINE Alu 2 296 -16 498 331 0 11 chr10 4119274 4119452 -136197313 + (TG)n Simple_repeat Simple_repeat 1 176 0 262 279 0 44 chr10 4119477 4119660 -136197105 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 1870 99 23 11 chr10 4121788 4122050 -136194715 + AluSg1 SINE Alu 39 303 -6 1433 231 140 7 chr10 4122494 4122900 -136193865 + MER65C LTR ERV1 1 460 -1 2035 164 55 33 chr10 4124876 4125419 -136191346 - MLT2A2 LTR ERVL -1 553 1 3415 130 2 2 chr10 4126590 4127081 -136189684 + L1PB1 LINE L1 5661 6151 0 25 31 0 0 chr10 4127336 4127368 -136189397 + AT_rich Low_complexity Low_complexity 1 32 0 1590 176 23 20 chr10 4128108 4128414 -136188351 - AluJb SINE Alu -5 307 1 210 269 298 0 chr10 4129750 4129854 -136186911 - L2 LINE L2 0 3272 3138 1660 130 30 15 chr10 4129992 4130261 -136186504 - L1PA13 LINE L1 -110 6053 5781 264 223 117 21 chr10 4130424 4130518 -136186247 - MER5A DNA MER1_type -83 106 4 243 0 0 0 chr10 4131090 4131117 -136185648 + (A)n Simple_repeat Simple_repeat 1 27 0 4504 124 19 5 chr10 4132058 4132705 -136184060 - L1PA13 LINE L1 0 6163 5508 190 255 85 106 chr10 4132855 4132949 -136183816 - MIR SINE MIR -100 108 17 304 250 35 132 chr10 4135903 4136131 -136180634 + L2 LINE L2 2291 2496 -818 1273 169 8 36 chr10 4136160 4136408 -136180357 - AluJo SINE Alu -32 280 40 704 141 0 0 chr10 4136408 4136507 -136180258 - AluJ/FLAM SINE Alu -211 101 3 210 296 14 0 chr10 4136508 4136579 -136180186 + L2 LINE L2 2776 2847 -467 1052 90 0 0 chr10 4137808 4137941 -136178824 + AluSq/x SINE Alu 1 133 -179 320 129 0 43 chr10 4137941 4137980 -136178785 + (A)n Simple_repeat Simple_repeat 1 37 -30 2035 137 0 9 chr10 4137980 4138295 -136178470 + AluSx SINE Alu 1 312 0 320 129 0 43 chr10 4138295 4138325 -136178440 + (A)n Simple_repeat Simple_repeat 37 67 0 291 317 34 46 chr10 4138868 4139053 -136177712 + MIR3 SINE MIR 17 198 -10 273 329 14 28 chr10 4140517 4140660 -136176105 - L2 LINE L2 -213 3059 2919 516 134 12 0 chr10 4141282 4141387 -136175378 - AluSc SINE Alu 0 311 206 41 98 0 0 chr10 4142764 4142896 -136173869 + AT_rich Low_complexity Low_complexity 1 132 0 2311 64 3 20 chr10 4143119 4143436 -136173329 + AluY SINE Alu 1 311 0 800 215 19 66 chr10 4144766 4145022 -136171743 - MER31B LTR ERV1 -222 244 1 2141 119 14 0 chr10 4146360 4146655 -136170110 + AluSp SINE Alu 1 299 -14 774 269 23 5 chr10 4148515 4148731 -136168034 + L2 LINE L2 2420 2639 -675 220 295 96 75 chr10 4148783 4149169 -136167596 + L2 LINE L2 2829 3222 -91 203 138 0 0 chr10 4151123 4151152 -136165613 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 622 167 15 0 chr10 4151232 4151364 -136165401 + GA-rich Low_complexity Low_complexity 2 135 0 181 343 95 19 chr10 4153456 4153561 -136163204 + L2 LINE L2 3200 3312 -1 1864 191 27 39 chr10 4153729 4154168 -136162597 - Tigger2a DNA MER2_type 0 434 1 34 55 0 0 chr10 4154230 4154285 -136162480 + AT_rich Low_complexity Low_complexity 1 55 0 329 329 0 77 chr10 4155748 4155761 -136161004 - MIR SINE MIR -81 181 169 1920 205 73 9 chr10 4155761 4156200 -136160565 - MLT1C LTR MaLR 0 467 1 329 329 0 77 chr10 4156200 4156341 -136160424 - MIR SINE MIR -93 169 39 235 214 0 0 chr10 4156692 4156734 -136160031 + polypyrimidine Low_complexity Low_complexity 2 43 0 23 0 0 0 chr10 4156899 4156922 -136159843 + AT_rich Low_complexity Low_complexity 1 23 0 2149 106 0 0 chr10 4160953 4161235 -136155530 + AluSx SINE Alu 1 282 -30 1748 157 42 12 chr10 4161441 4161773 -136154992 - L1PA15 LINE L1 0 6165 5824 208 313 104 26 chr10 4162181 4162296 -136154469 - L2 LINE L2 0 3313 3190 859 192 32 96 chr10 4162365 4162646 -136154119 + MLT2B1 LTR ERVL 5 267 -253 260 227 0 6 chr10 4162695 4162867 -136153898 + (TA)n Simple_repeat Simple_repeat 1 171 0 258 179 0 0 chr10 4162880 4162936 -136153829 + MLT2B1 LTR ERVL 460 515 0 2544 112 17 0 chr10 4163587 4163945 -136152820 - THE1B LTR MaLR 0 364 1 216 333 126 0 chr10 4164874 4164961 -136151804 + L2 LINE L2 3201 3298 -15 246 62 0 0 chr10 4164962 4164994 -136151771 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1544 139 171 0 chr10 4165775 4166033 -136150732 - AluSx SINE Alu -10 302 1 480 231 110 50 chr10 4166394 4166576 -136150189 + MER58A DNA MER1_type 23 215 -9 2011 128 13 7 chr10 4166635 4166939 -136149826 + AluSx SINE Alu 1 306 -6 506 262 105 88 chr10 4167311 4167483 -136149282 + L1MEc LINE L1 2135 2302 -3913 2268 67 0 27 chr10 4167483 4167783 -136148982 - AluY SINE Alu -19 292 1 506 262 105 88 chr10 4167783 4167821 -136148944 + L1MEc LINE L1 2302 2338 -3877 1198 212 134 24 chr10 4167821 4168193 -136148572 + MLT2D LTR ERVL 1 413 -1 506 262 105 88 chr10 4168193 4168562 -136148203 + L1MEc LINE L1 2338 2686 -3529 813 189 9 0 chr10 4169301 4169529 -136147236 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 480 305 7 13 chr10 4169567 4169718 -136147047 - L2 LINE L2 -6 3307 3158 2465 62 7 0 chr10 4170897 4171203 -136145562 + AluY SINE Alu 2 309 -2 243 61 0 0 chr10 4171285 4171318 -136145447 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 183 362 0 0 chr10 4172155 4172213 -136144552 + L2 LINE L2 3245 3302 -11 21 0 0 0 chr10 4173763 4173784 -136142981 + AT_rich Low_complexity Low_complexity 1 21 0 8402 157 21 12 chr10 4174122 4175669 -136141096 + Tigger1 DNA MER2_type 2 1562 -856 1037 166 32 9 chr10 4175670 4175887 -136140878 + Tigger1 DNA MER2_type 2197 2418 0 2163 128 10 7 chr10 4176243 4176549 -136140216 + AluSx SINE Alu 3 309 -3 377 245 32 0 chr10 4176767 4176861 -136139904 - Tigger2 DNA MER2_type -10 2708 2612 3875 187 24 5 chr10 4176866 4177673 -136139092 - Tigger2 DNA MER2_type -1894 824 3 3507 107 4 4 chr10 4179065 4179589 -136137176 - L1PB1 LINE L1 -5 6146 5623 2143 107 3 75 chr10 4179591 4180128 -136136637 + L1PB1 LINE L1 5086 5597 -554 185 105 0 26 chr10 4183665 4183703 -136133062 + (CA)n Simple_repeat Simple_repeat 2 38 0 833 331 72 24 chr10 4186817 4187682 -136129083 - ERVL-F LTR ERVL -4424 1340 361 826 84 0 15 chr10 4187809 4187940 -136128825 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 273 275 61 15 chr10 4187978 4188046 -136128719 - ERVL-F LTR ERVL -5624 140 77 309 51 0 0 chr10 4188046 4188085 -136128680 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 275 61 15 chr10 4188085 4188147 -136128618 - ERVL-F LTR ERVL -5687 77 4 1133 252 89 14 chr10 4188191 4188540 -136128225 - MLT2F LTR ERVL -58 605 231 1117 222 5 0 chr10 4188587 4188785 -136127980 + AluJb SINE Alu 86 284 -28 21 36 0 0 chr10 4191166 4191194 -136125571 + AT_rich Low_complexity Low_complexity 1 28 0 491 327 97 27 chr10 4191238 4191608 -136125157 + L2 LINE L2 1728 2123 -1191 286 297 94 92 chr10 4191809 4192014 -136124751 + L2 LINE L2 2560 2763 -509 1856 147 63 0 chr10 4192014 4192299 -136124466 - AluSx SINE Alu -9 303 1 286 297 94 92 chr10 4192299 4192571 -136124194 + L2 LINE L2 2763 3043 -229 2303 194 19 41 chr10 4192669 4193236 -136123529 - L1MB3 LINE L1 -339 5844 5290 22 0 0 0 chr10 4193262 4193284 -136123481 + AT_rich Low_complexity Low_complexity 1 22 0 707 195 24 76 chr10 4195676 4195886 -136120879 + MER20 DNA MER1_type 1 199 -20 1989 101 0 31 chr10 4195894 4196182 -136120583 + AluSx SINE Alu 1 279 -33 276 120 0 0 chr10 4196184 4196234 -136120531 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1225 233 64 16 chr10 4197301 4197678 -136119087 - L1MC2 LINE L1 -11 6333 5939 284 288 74 25 chr10 4198171 4198334 -136118431 - MLT1J2 LTR MaLR -11 439 269 333 342 0 0 chr10 4198405 4198522 -136118243 - MLT1J1 LTR MaLR -291 155 39 361 216 43 9 chr10 4198954 4199070 -136117695 + L1ME3A LINE L1 6046 6165 -5 204 310 155 17 chr10 4199487 4199603 -136117162 + L2 LINE L2 3179 3310 -3 298 226 47 75 chr10 4200628 4200734 -136116031 + LTR16C LTR ERVL 387 489 -2 1415 173 46 87 chr10 4201397 4201720 -136115045 - AluJb SINE Alu -2 310 1 1333 51 11 0 chr10 4204112 4204290 -136112475 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2191 134 0 3 chr10 4204299 4204612 -136112153 - AluSx SINE Alu 0 312 1 246 32 0 0 chr10 4205141 4205172 -136111593 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 182 61 0 chr10 4205589 4205655 -136111110 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 218 277 99 78 chr10 4205767 4206099 -136110666 + L2 LINE L2 2636 2974 -340 225 263 94 88 chr10 4206297 4206468 -136110297 + LTR16A1 LTR ERVL 286 457 0 207 360 40 8 chr10 4206632 4206757 -136110008 + L2 LINE L2 3113 3241 -72 1595 198 10 30 chr10 4207371 4207509 -136109256 + AluJb SINE Alu 1 140 -172 2317 73 3 3 chr10 4207509 4207795 -136108970 + AluSp SINE Alu 24 309 -4 1595 198 10 30 chr10 4207795 4207954 -136108811 + AluJb SINE Alu 140 292 -20 26 0 0 0 chr10 4207983 4208009 -136108756 + AT_rich Low_complexity Low_complexity 1 26 0 554 304 203 14 chr10 4208032 4208387 -136108378 - L2 LINE L2 0 3313 2892 21 0 0 0 chr10 4209005 4209026 -136107739 + AT_rich Low_complexity Low_complexity 1 21 0 244 328 0 0 chr10 4209029 4209093 -136107672 + (TG)n Simple_repeat Simple_repeat 1 64 0 210 262 0 0 chr10 4209106 4209190 -136107575 + (TG)n Simple_repeat Simple_repeat 2 85 0 2750 80 3 0 chr10 4210765 4211117 -136105648 - THE1A LTR MaLR -1 354 2 1845 164 0 10 chr10 4211896 4212184 -136104581 + AluJo SINE Alu 1 286 -22 252 77 0 0 chr10 4212184 4212223 -136104542 + (CATA)n Simple_repeat Simple_repeat 2 40 0 282 289 91 5 chr10 4214020 4214207 -136102558 - HAL1 LINE L1 -588 1919 1717 400 270 39 103 chr10 4214270 4214503 -136102262 - HAL1 LINE L1 -1448 1059 842 423 0 0 0 chr10 4214844 4214891 -136101874 + (TA)n Simple_repeat Simple_repeat 1 47 0 1320 238 127 30 chr10 4215949 4216415 -136100350 + MLT2B2 LTR ERVL 1 511 -4 2174 125 0 3 chr10 4216590 4216981 -136099784 - L1PA10 LINE L1 -570 5598 5209 3813 97 24 0 chr10 4216981 4217518 -136099247 + L1PA10 LINE L1 5618 6168 0 1146 183 0 8 chr10 4217982 4218217 -136098548 - Tigger7 DNA MER2_type 0 2487 2255 254 182 0 0 chr10 4218236 4218280 -136098485 - Tigger7 DNA MER2_type -292 47 4 227 351 55 18 chr10 4218498 4218663 -136098102 - MIR SINE MIR -3 259 89 197 312 56 40 chr10 4220990 4221115 -136095650 + L2 LINE L2 2659 2785 -529 359 268 113 30 chr10 4221145 4221313 -136095452 + MIR SINE MIR 11 192 -70 832 184 5 40 chr10 4221759 4221960 -136094805 - MER39B LTR ERV1 0 653 460 2000 227 39 16 chr10 4221963 4222478 -136094287 + MER87 LTR ERV1 11 537 -4 2504 140 35 22 chr10 4222483 4222939 -136093826 - MER39B LTR ERV1 -191 462 1 970 240 71 73 chr10 4223298 4223831 -136092934 - MER34B LTR ERV1 0 565 34 393 171 0 0 chr10 4225113 4225183 -136091582 + L1MA3 LINE L1 6180 6249 -56 563 141 0 0 chr10 4225186 4225278 -136091487 + L1MA1 LINE L1 6211 6302 0 2002 147 0 3 chr10 4227246 4227566 -136089199 - AluSx SINE Alu 0 312 7 2345 156 54 49 chr10 4228011 4228076 -136088689 - MER34B LTR ERV1 -29 536 473 504 30 0 0 chr10 4228076 4228143 -136088622 + L1PB3 LINE L1 6087 6153 -1 2345 156 54 49 chr10 4228143 4228610 -136088155 - MER34B LTR ERV1 -92 473 1 1826 118 0 0 chr10 4229213 4229458 -136087307 - AluSx SINE Alu -4 308 64 1558 220 66 18 chr10 4231318 4231759 -136085006 + MLT1C LTR MaLR 6 467 0 2586 59 0 0 chr10 4232615 4232919 -136083846 + AluY SINE Alu 1 304 -7 31 26 0 0 chr10 4233010 4233048 -136083717 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 4233754 4233780 -136082985 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr10 4234195 4234239 -136082526 + AT_rich Low_complexity Low_complexity 1 44 0 1434 228 25 11 chr10 4234679 4235038 -136081727 - MLT1A1 LTR MaLR -1 364 1 27 0 0 0 chr10 4235194 4235221 -136081544 + AT_rich Low_complexity Low_complexity 1 27 0 581 287 75 37 chr10 4235852 4236308 -136080457 - L1ME3 LINE L1 -211 6020 5548 450 67 0 0 chr10 4236414 4236474 -136080291 + Alu SINE Alu 232 291 -18 275 208 0 56 chr10 4236477 4236549 -136080216 + MIR SINE MIR 172 239 -23 264 286 0 0 chr10 4236557 4236613 -136080152 + MIR SINE MIR 200 255 -7 1649 158 0 58 chr10 4236721 4237032 -136079733 + AluJb SINE Alu 1 293 -19 357 174 0 0 chr10 4237033 4237102 -136079663 + GA-rich Low_complexity Low_complexity 2 70 0 669 204 0 0 chr10 4237815 4237962 -136078803 + (CA)n Simple_repeat Simple_repeat 1 147 0 2586 64 0 0 chr10 4237994 4238305 -136078460 - AluY SINE Alu 0 311 1 1913 301 53 50 chr10 4238330 4239257 -136077508 + L2 LINE L2 584 1513 -1801 458 224 0 20 chr10 4239272 4239470 -136077295 - L1ME3 LINE L1 -778 5533 5163 723 205 0 0 chr10 4239478 4239605 -136077160 - FLAM_C SINE Alu -16 127 1 1898 250 51 38 chr10 4239605 4240392 -136076373 - L1ME3 LINE L1 -1034 5181 4385 3972 163 30 36 chr10 4240398 4240979 -136075786 - L1MB3 LINE L1 -3 6180 5604 1948 157 118 18 chr10 4240979 4241368 -136075397 + MSTA LTR MaLR 1 428 0 3972 163 30 36 chr10 4241368 4241657 -136075108 - L1MB3 LINE L1 -579 5604 5315 707 257 93 13 chr10 4241654 4241954 -136074811 - L1ME3 LINE L1 -2159 4056 3733 * 1611 299 48 19 chr10 4241995 4242794 -136073971 - L1ME3 LINE L1 -5381 1015 194 735 135 7 85 chr10 4242903 4243044 -136073721 + AluSg/x SINE Alu 166 295 -15 316 309 98 5 chr10 4245150 4245196 -136071569 + L1ME4a LINE L1 5893 5933 -188 1759 173 4 0 chr10 4245196 4245474 -136071291 + AluJb SINE Alu 1 279 -33 316 309 98 5 chr10 4245474 4245621 -136071144 + L1ME4a LINE L1 5933 6104 -17 2060 112 31 0 chr10 4246543 4246830 -136069935 - AluSq SINE Alu -10 303 8 196 211 123 0 chr10 4246954 4247011 -136069754 + MIR SINE MIR 83 146 -62 1867 188 18 13 chr10 4247068 4247456 -136069309 + MLT1B LTR MaLR 1 390 0 230 378 71 0 chr10 4247819 4247946 -136068819 + MIR3 SINE MIR 58 193 -15 1482 125 51 0 chr10 4248095 4248311 -136068454 + AluSg/x SINE Alu 72 298 -12 1264 187 112 37 chr10 4248446 4248767 -136067998 - MER7A DNA MER2_type -3 343 1 183 200 27 13 chr10 4248923 4248998 -136067767 + (TA)n Simple_repeat Simple_repeat 2 77 0 369 109 0 0 chr10 4249033 4249088 -136067677 + (TA)n Simple_repeat Simple_repeat 1 55 0 241 322 154 43 chr10 4249098 4249306 -136067459 + MIR SINE MIR 32 262 0 294 180 0 0 chr10 4249686 4249747 -136067018 + CT-rich Low_complexity Low_complexity 4 64 0 1081 60 16 28 chr10 4249763 4249945 -136066820 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1858 169 3 19 chr10 4249953 4250260 -136066505 - AluSx SINE Alu -10 302 1 288 211 0 0 chr10 4250424 4250500 -136066265 + CT-rich Low_complexity Low_complexity 1 76 0 272 250 0 28 chr10 4250530 4250553 -136066212 + MER3 DNA MER1_type 27 47 -162 632 259 52 5 chr10 4250553 4250746 -136066019 - MER3 DNA MER1_type 0 209 8 506 398 46 16 chr10 4250947 4251445 -136065320 + L3 LINE CR1 929 1441 -136 2025 128 3 0 chr10 4251539 4251847 -136064918 + AluSx SINE Alu 1 309 0 1503 183 44 24 chr10 4252179 4252516 -136064249 - MLT1C LTR MaLR 0 467 118 526 168 19 9 chr10 4252516 4252623 -136064142 - AluJb SINE Alu -13 299 192 642 142 8 90 chr10 4252623 4252757 -136064008 - MLT1C LTR MaLR -267 123 1 353 326 54 32 chr10 4252848 4253161 -136063604 + L2 LINE L2 2709 3022 -250 398 311 190 6 chr10 4253276 4253607 -136063158 + L1ME2 LINE L1 5728 6119 -45 413 130 0 0 chr10 4255333 4255402 -136061363 + MER66B LTR ERV1 418 486 0 2063 154 0 0 chr10 4255491 4255789 -136060976 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 4255834 4255855 -136060910 + AT_rich Low_complexity Low_complexity 1 21 0 2242 120 0 0 chr10 4255871 4256170 -136060595 - AluSx SINE Alu -13 299 1 719 319 107 18 chr10 4258073 4258730 -136058035 - L2 LINE L2 -298 3015 2294 640 105 11 0 chr10 4259307 4259402 -136057363 + L1PB2 LINE L1 6053 6148 -3 25 0 0 0 chr10 4259402 4259427 -136057338 + AT_rich Low_complexity Low_complexity 1 25 0 3586 172 12 10 chr10 4259881 4260572 -136056193 - L1MB7 LINE L1 -9 6175 5484 326 90 254 0 chr10 4260588 4260655 -136056110 + L1MB3 LINE L1 6081 6164 -19 2789 102 0 10 chr10 4260675 4261087 -136055678 - L1PB1 LINE L1 0 6151 5744 657 296 66 84 chr10 4261498 4261950 -136054815 + MLT1J2 LTR MaLR 2 445 -5 1377 236 53 63 chr10 4262380 4262950 -136053815 + MER34B LTR ERV1 3 565 0 344 284 60 8 chr10 4263039 4263173 -136053592 - L2 LINE L2 0 3272 3132 217 384 15 8 chr10 4265480 4265613 -136051152 - L2 LINE L2 -6 3266 3133 352 303 21 14 chr10 4265735 4265877 -136050888 + MIR SINE MIR 86 228 -34 194 292 0 15 chr10 4266351 4266416 -136050349 - MIR SINE MIR 0 262 199 236 307 13 0 chr10 4266519 4266594 -136050171 - MIR SINE MIR -82 180 105 2222 128 0 0 chr10 4267957 4268263 -136048502 + AluSx SINE Alu 1 306 -6 1222 132 57 0 chr10 4268477 4268689 -136048076 + L1MA5A LINE L1 6071 6294 -3 23 54 0 0 chr10 4269279 4269316 -136047449 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 4269365 4269386 -136047379 + AT_rich Low_complexity Low_complexity 1 21 0 399 330 61 45 chr10 4269820 4270150 -136046615 + L1MC/D LINE L1 425 759 -5360 22 0 0 0 chr10 4270181 4270203 -136046562 + AT_rich Low_complexity Low_complexity 1 22 0 396 298 70 85 chr10 4270275 4270416 -136046349 + L1MC/D LINE L1 900 1042 -5077 360 64 0 0 chr10 4270416 4270463 -136046302 + (CA)n Simple_repeat Simple_repeat 1 47 0 396 298 70 85 chr10 4270463 4270650 -136046115 + L1MC/D LINE L1 1042 1223 -4896 342 316 134 20 chr10 4270785 4271181 -136045584 + L1MC/D LINE L1 2806 3246 -2883 527 121 165 0 chr10 4271182 4271273 -136045492 + AluSc SINE Alu 155 260 -49 400 349 27 36 chr10 4271397 4271727 -136045038 + L1MC/D LINE L1 4943 5269 -860 485 328 54 20 chr10 4271760 4272166 -136044599 + L1MC/D LINE L1 5311 5730 -2061 303 312 118 94 chr10 4273512 4273884 -136042881 + L1ME3A LINE L1 677 1057 -5473 2068 120 3 23 chr10 4274002 4274338 -136042427 + AluSx SINE Alu 1 312 0 364 286 5 43 chr10 4274481 4274666 -136042099 + L1ME3A LINE L1 1410 1587 -4943 247 340 28 0 chr10 4274828 4274934 -136041831 + L1ME3A LINE L1 1686 1794 -4748 321 289 117 49 chr10 4275299 4275565 -136041200 + L1ME3A LINE L1 2365 2648 -3892 342 312 76 30 chr10 4275660 4275923 -136040842 + L1ME3A LINE L1 3815 4089 -2451 687 307 63 8 chr10 4275988 4276353 -136040412 + L1ME3A LINE L1 4233 4617 -1923 366 318 90 67 chr10 4276440 4276931 -136039834 + L1ME3A LINE L1 4735 5236 -1304 829 141 33 0 chr10 4277355 4277476 -136039289 - FLAM_C SINE Alu -18 125 1 5349 163 22 9 chr10 4278411 4279390 -136037375 - L1MC1 LINE L1 -5 6328 5337 36 40 0 0 chr10 4281035 4281085 -136035680 + AT_rich Low_complexity Low_complexity 1 50 0 28 29 0 0 chr10 4281885 4281920 -136034845 + AT_rich Low_complexity Low_complexity 1 35 0 940 287 138 14 chr10 4282666 4283181 -136033584 + L1ME3A LINE L1 5977 6555 -9 285 281 104 18 chr10 4283177 4283341 -136033424 + L1ME4a LINE L1 5943 6120 -1 * 4979 245 60 31 chr10 4283977 4287020 -136029745 - L1MD2 LINE L1 -2 6617 3490 1816 287 17 4 chr10 4287030 4287724 -136029041 - L1MD2 LINE L1 -3218 3188 2486 1363 312 9 27 chr10 4287856 4288301 -136028464 - L1MD2 LINE L1 -5965 444 8 525 305 0 8 chr10 4288674 4288805 -136027960 + MER5A DNA MER1_type 1 130 -59 2433 45 3 0 chr10 4288828 4289120 -136027645 - AluY SINE Alu -18 293 1 199 329 14 0 chr10 4289147 4289220 -136027545 - L2 LINE L2 -1454 1860 1787 1905 181 57 24 chr10 4289689 4290109 -136026656 + Tigger2a DNA MER2_type 1 434 0 248 154 31 31 chr10 4290381 4290446 -136026319 + (TG)n Simple_repeat Simple_repeat 2 66 0 771 169 0 0 chr10 4290591 4290709 -136026056 - FLAM_C SINE Alu -25 118 1 212 200 50 0 chr10 4291290 4291370 -136025395 + (TA)n Simple_repeat Simple_repeat 1 84 0 22 70 0 0 chr10 4292035 4292078 -136024687 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 4292290 4292331 -136024434 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 4292729 4292749 -136024016 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1829 128 39 7 chr10 4292751 4292906 -136023859 - AluSx SINE Alu -21 291 122 279 0 0 0 chr10 4292906 4292937 -136023828 + (TG)n Simple_repeat Simple_repeat 2 32 0 1829 128 39 7 chr10 4292937 4293063 -136023702 - AluSx SINE Alu -190 122 1 260 360 43 0 chr10 4293065 4293204 -136023561 - L2 LINE L2 -535 2779 2635 356 278 110 86 chr10 4293512 4293757 -136023008 + MIR SINE MIR 12 262 0 273 299 88 15 chr10 4296716 4296853 -136019912 - L2 LINE L2 -6 3307 3161 227 350 68 23 chr10 4297158 4297378 -136019387 - MIR SINE MIR -13 249 20 1770 170 47 19 chr10 4297815 4298180 -136018585 - THE1C LTR MaLR 0 375 1 581 124 0 0 chr10 4298677 4298774 -136017991 - L1PA15 LINE L1 -8 6157 6061 2624 254 49 31 chr10 4298881 4300034 -136016731 - L1M4 LINE L1 -2498 3648 2475 892 251 88 91 chr10 4300094 4300843 -136015922 - L1MCb LINE L1 -5298 747 1 193 320 13 13 chr10 4301871 4301946 -136014819 + L2 LINE L2 3195 3269 -3 311 295 32 0 chr10 4302723 4302818 -136013947 - MER5A DNA MER1_type -79 110 13 433 250 52 0 chr10 4303060 4303176 -136013589 + MIR SINE MIR 111 232 -30 1553 154 33 46 chr10 4303255 4303561 -136013204 - AluJb SINE Alu -10 302 1 719 250 5 21 chr10 4303602 4303790 -136012975 - MER5A DNA MER1_type -1 188 4 231 36 0 0 chr10 4304373 4304401 -136012364 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 2154 117 0 0 chr10 4305277 4305608 -136011157 + AluSx SINE Alu 1 331 0 194 310 23 11 chr10 4306359 4306446 -136010319 - L2 LINE L2 -462 2852 2765 1279 199 153 3 chr10 4307705 4308006 -136008759 + MER7A DNA MER2_type 3 346 0 616 296 151 20 chr10 4308016 4308414 -136008351 - MLT1J2 LTR MaLR 0 450 1 228 235 20 0 chr10 4308561 4308612 -136008153 + CT-rich Low_complexity Low_complexity 4 55 0 832 121 14 0 chr10 4309686 4309827 -136006938 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 1845 104 7 0 chr10 4311141 4311411 -136005354 + THE1B LTR MaLR 93 364 0 1478 220 24 69 chr10 4311630 4312093 -136004672 - MLT2B1 LTR ERVL -74 446 5 2099 118 0 0 chr10 4312202 4312520 -136004245 - AluSg SINE Alu 0 318 1 33 0 0 0 chr10 4313051 4313084 -136003681 + AT_rich Low_complexity Low_complexity 1 33 0 248 312 109 18 chr10 4313715 4313991 -136002774 + L1ME2 LINE L1 4950 5250 -896 600 326 59 25 chr10 4313992 4314581 -136002184 + L1ME LINE L1 29 637 -5433 263 301 0 0 chr10 4314815 4314908 -136001857 + L1ME LINE L1 537 629 -5441 255 312 0 0 chr10 4314927 4315020 -136001745 + L1ME LINE L1 537 629 -5441 812 229 41 28 chr10 4315047 4315410 -136001355 + L1ME LINE L1 545 912 -5158 723 265 59 97 chr10 4315414 4316021 -136000744 + L1ME2 LINE L1 5494 6077 -87 21 36 0 0 chr10 4316091 4316119 -136000646 + AT_rich Low_complexity Low_complexity 1 28 0 1745 149 3 21 chr10 4317812 4318094 -135998671 + AluJb SINE Alu 1 277 -35 180 273 146 0 chr10 4319704 4319759 -135997006 + MIR SINE MIR 57 119 -143 326 184 23 35 chr10 4319977 4320064 -135996701 + MER89 LTR ERV1 1 86 -473 280 210 105 24 chr10 4320038 4320162 -135996603 + MER89 LTR ERV1 197 330 -229 * 1878 160 77 34 chr10 4320958 4321468 -135995297 + MLT2A2 LTR ERVL 3 554 0 1012 220 118 32 chr10 4321540 4321913 -135994852 + MER119 DNA MER1_type 176 580 -3 522 83 0 0 chr10 4323545 4323617 -135993148 + (TA)n Simple_repeat Simple_repeat 1 72 0 6962 35 3 0 chr10 4324312 4325531 -135991234 - L1PA4 LINE L1 -20 6135 4913 803 278 81 17 chr10 4327197 4327557 -135989208 - L1ME3A LINE L1 -5 6165 5783 529 288 127 22 chr10 4327561 4327828 -135988937 - L1ME3A LINE L1 -423 5747 5453 1551 187 57 3 chr10 4330638 4331000 -135985765 - MLT1B LTR MaLR -14 453 1 2457 54 0 3 chr10 4331491 4331788 -135984977 - AluY SINE Alu -15 296 1 781 194 0 8 chr10 4332534 4332668 -135984097 + FLAM_C SINE Alu 1 133 -10 2174 102 0 10 chr10 4332682 4332977 -135983788 - AluSx SINE Alu -16 296 5 39 60 0 0 chr10 4333233 4333300 -135983465 + AT_rich Low_complexity Low_complexity 1 67 0 462 260 46 4 chr10 4333447 4333619 -135983146 + MER92A LTR ERV1 264 412 0 24 0 0 0 chr10 4335702 4335726 -135981039 + AT_rich Low_complexity Low_complexity 1 24 0 256 229 14 14 chr10 4336143 4336213 -135980552 + CT-rich Low_complexity Low_complexity 2 71 0 185 324 73 0 chr10 4336439 4336507 -135980258 - MER5A DNA MER1_type 0 189 117 22 0 0 0 chr10 4337001 4337023 -135979742 + AT_rich Low_complexity Low_complexity 1 22 0 2333 106 0 3 chr10 4337693 4338005 -135978760 + AluY SINE Alu 1 311 0 22 0 0 0 chr10 4338090 4338112 -135978653 + AT_rich Low_complexity Low_complexity 1 22 0 1089 197 10 10 chr10 4338267 4338475 -135978290 + AluJo SINE Alu 87 294 -18 1901 180 107 7 chr10 4338751 4339189 -135977576 - MER31A LTR ERV1 0 485 4 1694 194 61 16 chr10 4339451 4340061 -135976704 + MER39 LTR ERV1 2 701 -6 25 31 0 0 chr10 4341398 4341430 -135975335 + AT_rich Low_complexity Low_complexity 1 32 0 1121 216 24 0 chr10 4341891 4342145 -135974620 + MER57A LTR ERV1 1 260 -143 235 362 12 0 chr10 4342687 4342850 -135973915 + (CACTT)n Simple_repeat Simple_repeat 2 166 0 220 307 21 14 chr10 4343482 4343622 -135973143 + (CTTTA)n Simple_repeat Simple_repeat 3 143 0 244 64 21 0 chr10 4343666 4343713 -135973052 + MER57A LTR ERV1 215 262 -141 258 358 0 6 chr10 4343821 4344000 -135972765 + (CTTTA)n Simple_repeat Simple_repeat 2 179 0 244 64 21 0 chr10 4344003 4344050 -135972715 + MER57A LTR ERV1 215 262 -141 219 297 29 17 chr10 4344060 4344235 -135972530 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 273 301 45 0 chr10 4346367 4346523 -135970242 - MER117 DNA MER1_type -5 192 30 515 191 15 15 chr10 4349787 4349918 -135966847 + CT-rich Low_complexity Low_complexity 1 180 0 1370 196 9 82 chr10 4349918 4350249 -135966516 - AluJb SINE Alu -5 307 1 214 339 161 37 chr10 4350631 4350985 -135965780 - L3 LINE CR1 -761 816 419 198 303 76 41 chr10 4351627 4351772 -135964993 + L2 LINE L2 2380 2529 -785 199 356 29 10 chr10 4354313 4354417 -135962348 + L2 LINE L2 3164 3269 -3 350 194 37 46 chr10 4354724 4354832 -135961933 + MER69 DNA AcHobo 2408 2514 -12 22 0 0 0 chr10 4355267 4355289 -135961476 + AT_rich Low_complexity Low_complexity 1 22 0 265 293 17 17 chr10 4355487 4355603 -135961162 + LTR67 LTR ERVL 429 544 -13 217 241 37 19 chr10 4355617 4355671 -135961094 - MIR3 SINE MIR -36 172 118 292 236 18 0 chr10 4356209 4356319 -135960446 + (CA)n Simple_repeat Simple_repeat 1 112 0 406 261 12 0 chr10 4356342 4356507 -135960258 + (CA)n Simple_repeat Simple_repeat 1 167 0 2853 227 24 27 chr10 4357175 4357885 -135958880 + L1MB5 LINE L1 5431 6138 -36 266 185 15 15 chr10 4359722 4359787 -135956978 + MER4-int LTR ERV1 1102 1166 -5432 188 167 21 0 chr10 4359809 4359857 -135956908 + (TG)n Simple_repeat Simple_repeat 2 50 0 401 133 13 0 chr10 4360112 4360187 -135956578 + GA-rich Low_complexity Low_complexity 3 78 0 2247 107 0 0 chr10 4361143 4361432 -135955333 - AluSq SINE Alu -24 289 1 255 267 0 0 chr10 4361521 4361581 -135955184 + (TG)n Simple_repeat Simple_repeat 1 60 0 250 194 30 0 chr10 4361581 4361648 -135955117 + (TA)n Simple_repeat Simple_repeat 2 70 0 227 152 0 0 chr10 4361648 4361694 -135955071 - LTR66 LTR ERVL -171 439 394 209 186 35 12 chr10 4361793 4361879 -135954886 + (TA)n Simple_repeat Simple_repeat 2 89 0 299 198 23 47 chr10 4362430 4362516 -135954249 - L1MEc LINE L1 -6274 122 39 2431 51 7 0 chr10 4363940 4364235 -135952530 + AluY SINE Alu 1 297 -14 1138 219 100 14 chr10 4364855 4365210 -135951555 - MLT1C LTR MaLR 0 467 81 911 83 0 0 chr10 4365210 4365331 -135951434 + L1PA13 LINE L1 6030 6150 -13 941 203 0 0 chr10 4365341 4365504 -135951261 + FRAM SINE Alu 1 160 -16 233 121 0 0 chr10 4365517 4365550 -135951215 - MER65A LTR ERV1 -218 227 195 279 234 39 0 chr10 4365558 4365635 -135951130 - MLT1C LTR MaLR -387 80 1 184 352 159 27 chr10 4365989 4366361 -135950404 + L2 LINE L2 2319 2739 -575 1298 191 88 27 chr10 4366471 4366801 -135949964 - MLT1A1 LTR MaLR 0 365 16 255 335 113 38 chr10 4366959 4367198 -135949567 + L2 LINE L2 3003 3259 -54 1195 233 92 85 chr10 4369705 4370315 -135946450 - MLT1E3 LTR MaLR -2 622 9 1641 194 10 0 chr10 4370319 4370613 -135946152 + AluJo SINE Alu 1 297 -15 3141 171 86 21 chr10 4370742 4371420 -135945345 - MER72 LTR ERV1 0 722 1 21 57 0 0 chr10 4372035 4372070 -135944695 + AT_rich Low_complexity Low_complexity 1 35 0 2312 103 0 3 chr10 4372639 4372951 -135943814 - AluSq SINE Alu -2 311 1 3592 235 104 16 chr10 4373861 4375068 -135941697 + Charlie1 DNA MER1_type 1449 2761 0 33 0 0 0 chr10 4376302 4376335 -135940430 + AT_rich Low_complexity Low_complexity 1 33 0 265 230 0 23 chr10 4376626 4376713 -135940052 + (CATA)n Simple_repeat Simple_repeat 4 88 0 184 240 47 130 chr10 4376723 4376795 -135939970 + MIR SINE MIR 88 164 -98 1581 197 13 7 chr10 4376795 4377095 -135939670 + AluJo SINE Alu 1 302 -10 184 240 47 130 chr10 4377095 4377202 -135939563 + MIR SINE MIR 164 256 -6 189 213 0 0 chr10 4377405 4377452 -135939313 + GA-rich Low_complexity Low_complexity 1 47 0 213 146 24 0 chr10 4378713 4378754 -135938011 + A-rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 4379469 4379493 -135937272 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 4379770 4379792 -135936973 + AT_rich Low_complexity Low_complexity 1 22 0 4336 252 69 55 chr10 4379852 4380037 -135936728 - L1MB7 LINE L1 0 6184 6003 1494 28 0 11 chr10 4380037 4380219 -135936546 + L1PA3 LINE L1 5976 6155 0 4336 252 69 55 chr10 4380219 4380661 -135936104 - L1MB7 LINE L1 -181 6003 5568 1818 149 0 17 chr10 4380661 4380962 -135935803 - AluJo SINE Alu -16 296 1 4336 252 69 55 chr10 4380962 4383376 -135933389 - L1MB7 LINE L1 -616 5568 3188 1677 166 3 21 chr10 4383376 4383695 -135933070 + AluJb SINE Alu 1 314 0 4336 252 69 55 chr10 4383695 4384578 -135932187 - L1MB7 LINE L1 -2996 3188 3784 2059 144 32 16 chr10 4384578 4384947 -135931818 + THE1C LTR MaLR 1 375 0 4336 252 69 55 chr10 4384947 4385313 -135931452 - L1MB7 LINE L1 -2399 3785 3425 6032 249 44 50 chr10 4385428 4388075 -135928690 + L1M4 LINE L1 2467 5098 -1048 404 238 10 0 chr10 4388123 4388224 -135928541 + L1MC1 LINE L1 6232 6333 0 2227 102 0 0 chr10 4388247 4388541 -135928224 - AluSc SINE Alu -15 294 1 1894 144 30 7 chr10 4388770 4389069 -135927696 + AluSx SINE Alu 1 306 -6 358 274 108 0 chr10 4389412 4389569 -135927196 + MIR SINE MIR 89 262 0 954 231 158 7 chr10 4389844 4390142 -135926623 + MER2 DNA MER2_type 1 343 -1 2613 259 41 18 chr10 4390166 4390626 -135926139 - L1MC4 LINE L1 0 8042 7553 782 187 42 61 chr10 4390626 4390840 -135925925 + MER6B DNA MER2_type 1 210 0 2613 259 41 18 chr10 4390840 4391216 -135925549 - L1MC4 LINE L1 -489 7553 7187 2316 160 42 7 chr10 4391860 4392267 -135924498 + MSTB LTR MaLR 6 426 0 620 313 27 30 chr10 4396921 4397183 -135919582 - MIR SINE MIR 0 262 2 6778 160 51 24 chr10 4397982 4399282 -135917483 - Tigger1 DNA MER2_type 0 2418 1084 2323 164 32 50 chr10 4399288 4399787 -135916978 - Tigger1 DNA MER2_type -1928 490 1 206 285 159 46 chr10 4400720 4400871 -135915894 + L3 LINE CR1 280 447 -1130 355 255 150 13 chr10 4400928 4401081 -135915684 - L2 LINE L2 -12 3301 3128 381 266 94 47 chr10 4401833 4402130 -135914635 - MLT1J LTR MaLR -7 504 194 522 273 78 7 chr10 4403549 4403857 -135912908 - L1MB7 LINE L1 -2951 3195 2866 5150 80 11 23 chr10 4403862 4404647 -135912118 + L1PA8A LINE L1 5355 6130 -1 441 314 7 37 chr10 4404650 4404839 -135911926 - L1MB7 LINE L1 -3267 2879 2696 28 61 0 0 chr10 4404903 4404952 -135911813 + AT_rich Low_complexity Low_complexity 1 49 0 354 123 0 0 chr10 4405603 4405660 -135911105 + (CA)n Simple_repeat Simple_repeat 2 58 0 203 248 9 0 chr10 4405692 4405797 -135910968 + (TA)n Simple_repeat Simple_repeat 1 106 0 243 0 0 0 chr10 4405798 4405825 -135910940 + (CA)n Simple_repeat Simple_repeat 2 28 0 2147 125 3 0 chr10 4406666 4406962 -135909803 + AluSp SINE Alu 1 297 -16 486 47 94 0 chr10 4406962 4407090 -135909675 + (TA)n Simple_repeat Simple_repeat 1 140 0 446 313 98 9 chr10 4407836 4408060 -135908705 + MIR SINE MIR 18 261 -1 216 0 0 0 chr10 4408360 4408384 -135908381 + (A)n Simple_repeat Simple_repeat 1 24 0 270 0 0 0 chr10 4410902 4410932 -135905833 + (CA)n Simple_repeat Simple_repeat 2 31 0 183 227 78 109 chr10 4411220 4411348 -135905417 + L2 LINE L2 2552 2675 -639 3430 158 39 2 chr10 4411716 4412328 -135904437 - MER41B LTR ERV1 0 635 1 230 329 61 0 chr10 4412362 4412444 -135904321 + L2 LINE L2 3209 3295 -18 1472 189 0 0 chr10 4412581 4412846 -135903919 + MLT1A1 LTR MaLR 101 365 0 306 0 0 0 chr10 4413162 4413196 -135903569 + (CA)n Simple_repeat Simple_repeat 1 34 0 398 94 16 0 chr10 4413398 4413462 -135903303 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 3381 154 48 9 chr10 4415967 4416598 -135900167 - L1PA15 LINE L1 -7 6158 5504 2213 112 3 0 chr10 4417055 4417359 -135899406 - AluSx SINE Alu -7 305 1 268 318 91 0 chr10 4417581 4417691 -135899074 + L2 LINE L2 2939 3058 -214 207 224 0 86 chr10 4418247 4418363 -135898402 + A-rich Low_complexity Low_complexity 2 107 0 208 153 25 76 chr10 4418815 4418972 -135897793 + (TA)n Simple_repeat Simple_repeat 1 149 0 253 323 42 37 chr10 4419912 4420101 -135896664 - L2 LINE L2 0 3313 3124 722 214 11 32 chr10 4420157 4420344 -135896421 - MER58A DNA MER1_type -40 184 2 501 359 38 23 chr10 4420388 4420650 -135896115 - L2 LINE L2 -244 3069 2804 242 275 44 0 chr10 4421063 4421154 -135895611 - L1MEc LINE L1 -3730 2485 2391 4713 165 32 5 chr10 4421167 4422184 -135894581 - L1PA16 LINE L1 -9 6157 5116 537 260 34 15 chr10 4422218 4422483 -135894282 - L1MEc LINE L1 -3992 2404 2135 357 261 60 19 chr10 4422643 4422858 -135893907 - L1MEc LINE L1 -5320 1076 853 3507 127 32 18 chr10 4472860 4473458 -135843307 - MER4B LTR ERV1 -4 606 1 201 239 204 23 chr10 4473461 4473549 -135843216 - L2 LINE L2 -1084 2230 2127 930 314 192 39 chr10 4473643 4474499 -135842266 - L2 LINE L2 -1359 1955 969 1598 247 89 21 chr10 4474561 4475088 -135841677 + MLT1E2 LTR MaLR 63 625 -1 201 360 23 23 chr10 4475129 4475301 -135841464 - L2 LINE L2 -2424 890 719 182 333 0 0 chr10 4476518 4476566 -135840199 + L2 LINE L2 3207 3254 -18 323 259 36 9 chr10 4478596 4478708 -135838057 - MIR3 SINE MIR -5 203 89 305 243 75 56 chr10 4479140 4479247 -135837518 + HAL1 LINE L1 1914 2022 -485 1848 289 128 40 chr10 4479327 4480535 -135836230 - L2 LINE L2 -365 2949 1635 274 268 106 7 chr10 4481066 4481208 -135835557 + HAL1 LINE L1 2243 2398 -109 207 167 0 0 chr10 4481987 4482029 -135834736 + T-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr10 4482349 4482369 -135834396 + (T)n Simple_repeat Simple_repeat 1 20 0 246 190 13 25 chr10 4482693 4482772 -135833993 + (TA)n Simple_repeat Simple_repeat 2 79 0 1020 171 6 0 chr10 4483361 4483536 -135833229 - L1PB3 LINE L1 -11 6143 5968 191 357 10 20 chr10 4484027 4484125 -135832640 + L2 LINE L2 3141 3237 -35 1906 159 12 18 chr10 4484159 4484672 -135832093 + MER39B LTR ERV1 1 603 -50 863 163 182 36 chr10 4484672 4484964 -135831801 - MER61C LTR ERV1 0 434 1 23 0 0 0 chr10 4485351 4485374 -135831391 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr10 4487584 4487620 -135829145 + AT_rich Low_complexity Low_complexity 1 36 0 1315 102 0 0 chr10 4488085 4488287 -135828478 - AluSg/x SINE Alu 0 318 117 235 152 121 15 chr10 4488746 4488812 -135827953 - MIR SINE MIR -33 229 157 1025 126 7 0 chr10 4490690 4490841 -135825924 + AluSp SINE Alu 1 152 -161 1161 86 0 7 chr10 4491101 4491252 -135825513 - AluSp/q SINE Alu -10 303 154 241 211 125 79 chr10 4491363 4491515 -135825250 + L1MC5 LINE L1 7752 7910 -51 1999 142 0 7 chr10 4491655 4491999 -135824766 - AluSx SINE Alu 0 312 1 443 117 0 0 chr10 4492090 4492167 -135824598 + L1PA13 LINE L1 5939 6015 -148 687 39 39 0 chr10 4492359 4492461 -135824304 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 319 308 112 14 chr10 4492470 4492684 -135824081 + L1MEc LINE L1 1925 2159 -4237 732 310 29 55 chr10 4492710 4493094 -135823671 - MLT1B LTR MaLR -16 374 1 357 234 5 101 chr10 4493140 4493328 -135823437 + L1MEc LINE L1 2209 2378 -4018 367 268 87 0 chr10 4493454 4493581 -135823184 - MLT1F1 LTR MaLR -428 139 2 21 0 0 0 chr10 4494598 4494619 -135822146 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4495534 4495560 -135821205 + AT_rich Low_complexity Low_complexity 1 26 0 886 205 13 0 chr10 4496015 4496171 -135820594 - AluJo SINE Alu -147 165 8 21 0 0 0 chr10 4498228 4498249 -135818516 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr10 4498285 4498329 -135818436 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 232 313 56 49 chr10 4501995 4502139 -135814626 - MIR SINE MIR -21 241 97 266 256 13 13 chr10 4502292 4502370 -135814395 + MIR SINE MIR 184 261 -1 352 240 16 33 chr10 4502908 4503029 -135813736 - L1MC4a LINE L1 -1875 5933 5815 219 328 0 0 chr10 4503061 4503119 -135813646 - L2 LINE L2 -4 3268 3211 498 203 105 28 chr10 4503427 4503570 -135813195 + MER50 LTR ERV1 10 163 -571 1142 127 35 119 chr10 4504270 4504640 -135812125 + THE1C LTR MaLR 37 375 0 3578 156 9 9 chr10 4505861 4506690 -135810075 + L1PA13 LINE L1 5053 5882 -281 233 296 12 12 chr10 4507666 4507747 -135809018 + CT-rich Low_complexity Low_complexity 1 81 0 414 0 0 0 chr10 4507749 4507795 -135808970 + (CA)n Simple_repeat Simple_repeat 2 47 0 242 353 69 40 chr10 4508107 4508280 -135808485 - L2 LINE L2 -1408 1906 1729 207 100 0 0 chr10 4509258 4509288 -135807477 + (TG)n Simple_repeat Simple_repeat 2 31 0 638 138 88 6 chr10 4509404 4509564 -135807201 + L1MCa LINE L1 2280 2452 -3974 * 2747 166 27 27 chr10 4509561 4510089 -135806676 + L1MC1 LINE L1 5787 6317 -16 2445 55 0 21 chr10 4510089 4510404 -135806361 + L1PA8 LINE L1 5851 6169 -3 2747 166 27 27 chr10 4510404 4510422 -135806343 + L1MC1 LINE L1 6316 6333 0 36 23 0 0 chr10 4510687 4510730 -135806035 + AT_rich Low_complexity Low_complexity 1 43 0 2247 115 0 0 chr10 4511206 4511502 -135805263 - AluSq SINE Alu -17 296 1 1780 109 15 40 chr10 4512218 4512515 -135804250 + AluSq SINE Alu 47 336 0 2197 225 79 63 chr10 4512806 4513641 -135803124 - L1ME2 LINE L1 -34 6130 5283 2111 81 14 3 chr10 4513720 4514016 -135802749 - L1PA8 LINE L1 -5 6167 5869 1738 65 4 0 chr10 4514016 4514245 -135802520 + L1PA8 LINE L1 5648 5877 -295 210 80 60 20 chr10 4514263 4514313 -135802452 + (TA)n Simple_repeat Simple_repeat 1 52 0 600 276 123 78 chr10 4514323 4516282 -135800483 - L1ME LINE L1 -3550 2832 796 1347 247 7 3 chr10 4516355 4516638 -135800127 - AluJo SINE Alu -22 290 7 328 348 70 43 chr10 4517415 4517645 -135799120 - MIR SINE MIR -3 259 24 25 0 0 0 chr10 4518759 4518784 -135797981 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 4519171 4519200 -135797565 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 4520362 4520386 -135796379 + AT_rich Low_complexity Low_complexity 1 24 0 962 216 96 45 chr10 4520748 4520776 -135795989 + Charlie2 DNA MER1_type 2307 2332 -530 2219 119 12 3 chr10 4520776 4521119 -135795646 + L1PB1 LINE L1 5806 6151 0 962 216 96 45 chr10 4521119 4521538 -135795227 + Charlie2 DNA MER1_type 2332 2777 -85 1013 220 110 38 chr10 4521969 4522396 -135794369 - MLT1C LTR MaLR -4 463 6 406 242 37 58 chr10 4523460 4523650 -135793115 + Charlie2 DNA MER1_type 2596 2781 -81 655 176 25 17 chr10 4524535 4524654 -135792111 + FLAM_C SINE Alu 2 121 -12 1061 159 0 17 chr10 4524746 4524922 -135791843 + FRAM SINE Alu 4 176 0 406 318 38 30 chr10 4526373 4526609 -135790156 + MIR SINE MIR 24 261 -1 1728 156 0 73 chr10 4527059 4527373 -135789392 + AluJb SINE Alu 1 291 -21 395 16 62 0 chr10 4527373 4527437 -135789328 + (TA)n Simple_repeat Simple_repeat 2 69 0 317 277 39 0 chr10 4527451 4527581 -135789184 + L1ME4a LINE L1 5751 5885 -236 267 224 20 20 chr10 4527610 4527757 -135789008 + GA-rich Low_complexity Low_complexity 2 148 0 1853 93 0 19 chr10 4529721 4529990 -135786775 - L1PA8 LINE L1 -2 6170 5907 243 0 0 0 chr10 4530106 4530133 -135786632 + (CA)n Simple_repeat Simple_repeat 1 27 0 2233 86 0 20 chr10 4530297 4530599 -135786166 + AluY SINE Alu 1 296 -15 712 181 12 0 chr10 4531189 4531360 -135785405 + GA-rich Low_complexity Low_complexity 4 176 0 261 0 0 0 chr10 4531438 4531467 -135785298 + (TG)n Simple_repeat Simple_repeat 1 29 0 1986 110 0 7 chr10 4531665 4532002 -135784763 - AluSc SINE Alu 0 335 1 284 291 101 34 chr10 4532364 4532543 -135784222 - LTR33 LTR ERVL -78 443 253 294 299 162 25 chr10 4532551 4532835 -135783930 - ERVL LTR ERVL -865 4899 4577 402 254 134 69 chr10 4532943 4533175 -135783590 - MLT1H LTR MaLR -197 352 106 377 264 110 61 chr10 4533231 4533585 -135783180 - L1M4 LINE L1 -2486 3660 3280 2124 122 3 0 chr10 4533585 4533879 -135782886 - AluSx SINE Alu -17 295 1 377 264 110 61 chr10 4533879 4533952 -135782813 - L1M4 LINE L1 -2866 3280 3212 594 313 37 49 chr10 4534104 4534430 -135782335 + L3 LINE CR1 1139 1460 -117 4330 233 57 27 chr10 4534453 4535814 -135780951 + Charlie1a DNA MER1_type 39 1439 -16 201 337 22 11 chr10 4536895 4536987 -135779778 - L2 LINE L2 -1 3271 3179 369 189 82 61 chr10 4537820 4538016 -135778749 + Charlie1 DNA MER1_type 2471 2670 -91 * 773 192 87 9 chr10 4538010 4538239 -135778526 + Charlie5 DNA MER1_type 2330 2576 -36 2639 179 12 0 chr10 4538341 4538832 -135777933 + LOR1a LTR ERV1 1 497 0 22 88 0 0 chr10 4539364 4539421 -135777344 + AT_rich Low_complexity Low_complexity 1 57 0 37 39 0 0 chr10 4539579 4539630 -135777135 + AT_rich Low_complexity Low_complexity 1 51 0 484 291 91 25 chr10 4542069 4542386 -135774379 + L1ME LINE L1 5317 5661 -460 183 114 0 0 chr10 4543601 4543636 -135773129 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 2555 162 36 0 chr10 4544780 4545225 -135771540 + LOR1b LTR ERV1 1 461 0 311 316 0 38 chr10 4547079 4547158 -135769607 - MIR SINE MIR -178 84 9 2291 144 58 16 chr10 4549978 4550408 -135766357 + L1PB3 LINE L1 5707 6154 0 44 20 0 0 chr10 4551516 4551567 -135765198 + AT_rich Low_complexity Low_complexity 1 51 0 367 189 38 13 chr10 4552028 4552187 -135764578 + (TA)n Simple_repeat Simple_repeat 1 163 0 1286 220 55 52 chr10 4552197 4552560 -135764205 - MLT2D LTR ERVL -40 374 11 842 210 66 0 chr10 4553483 4553664 -135763101 - LTR26 LTR ERV1 0 603 411 958 287 22 0 chr10 4553939 4554214 -135762551 - MER45C DNA AcHobo -671 282 2 1793 180 91 29 chr10 4556777 4557194 -135759571 - MSTB2 LTR MaLR 0 457 15 1547 93 23 0 chr10 4560471 4560687 -135756078 - L1PA13 LINE L1 -4 6159 5939 2174 128 0 6 chr10 4560778 4561090 -135755675 + AluSx SINE Alu 1 310 -2 207 191 0 0 chr10 4561096 4561143 -135755622 + A-rich Low_complexity Low_complexity 1 47 0 374 238 115 46 chr10 4561261 4561522 -135755243 - L1MC5 LINE L1 -51 7910 7632 1248 79 0 0 chr10 4561524 4561676 -135755089 + AluSp/q SINE Alu 154 305 -8 2375 101 3 0 chr10 4562811 4563119 -135753646 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr10 4563719 4563748 -135753017 + AT_rich Low_complexity Low_complexity 1 29 0 943 234 49 19 chr10 4563757 4564131 -135752634 - L1ME1 LINE L1 -19 6643 6238 641 269 92 8 chr10 4564127 4564365 -135752400 - L1ME1 LINE L1 -1221 5423 5166 * 1326 271 42 17 chr10 4564348 4564943 -135751822 - L1ME1 LINE L1 -2890 3754 3145 3000 258 45 45 chr10 4564953 4566010 -135750755 - L1ME1 LINE L1 -5458 1084 29 794 243 42 58 chr10 4566024 4566402 -135750363 - L1M4 LINE L1 -1377 4769 4398 26 0 0 0 chr10 4566408 4566434 -135750331 + AT_rich Low_complexity Low_complexity 1 26 0 669 165 177 0 chr10 4566435 4566593 -135750172 - L1MA8 LINE L1 -3 6288 6103 * 3347 160 29 7 chr10 4566591 4567646 -135749119 - L1MA8 LINE L1 -429 5883 4813 500 245 76 81 chr10 4567636 4567870 -135748895 - L1MDa LINE L1 -3890 2650 2417 * 1004 283 32 58 chr10 4567870 4568270 -135748495 + MLT1B LTR MaLR 1 390 0 500 245 76 81 chr10 4568270 4568503 -135748262 - L1MDa LINE L1 -4123 2417 2185 687 39 39 0 chr10 4568503 4568605 -135748160 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 500 245 76 81 chr10 4568605 4568715 -135748050 - L1MDa LINE L1 -4355 2185 2076 1681 147 0 41 chr10 4568715 4569044 -135747721 - AluJb SINE Alu 0 319 3 500 245 76 81 chr10 4569044 4569195 -135747570 - L1MDa LINE L1 -4464 2076 1929 222 91 0 0 chr10 4569620 4569653 -135747112 + (TATG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr10 4569854 4569877 -135746888 + AT_rich Low_complexity Low_complexity 1 23 0 381 205 0 12 chr10 4571323 4571406 -135745359 + HERVL LTR ERVL 4521 4602 -1052 1891 179 61 47 chr10 4571407 4571831 -135744934 - MSTB1 LTR MaLR 0 432 3 896 265 105 41 chr10 4571840 4572140 -135744625 + HERVL LTR ERVL 4643 4971 -793 975 244 55 88 chr10 4572140 4572525 -135744240 - MLT1A2 LTR MaLR -2 372 1 896 265 105 41 chr10 4572525 4572586 -135744179 + HERVL LTR ERVL 4971 5027 -737 2054 135 0 0 chr10 4573015 4573297 -135743468 + AluSc SINE Alu 1 282 -27 198 0 0 0 chr10 4573297 4573319 -135743446 + (TA)n Simple_repeat Simple_repeat 2 23 0 36 40 0 0 chr10 4573377 4573427 -135743338 + AT_rich Low_complexity Low_complexity 1 50 0 1006 250 14 0 chr10 4573702 4573914 -135742851 + MER58A DNA MER1_type 2 216 -8 286 132 15 29 chr10 4574074 4574142 -135742623 + CT-rich Low_complexity Low_complexity 4 70 0 598 234 140 27 chr10 4574265 4574522 -135742243 - L1M4 LINE L1 -3428 2718 2433 346 281 22 15 chr10 4574933 4575068 -135741697 + MIR SINE MIR 65 200 -62 1849 155 13 26 chr10 4575448 4575757 -135741008 - AluSx SINE Alu -6 306 2 24 0 0 0 chr10 4575878 4575902 -135740863 + AT_rich Low_complexity Low_complexity 1 24 0 2128 120 3 0 chr10 4576283 4576583 -135740182 + AluSx SINE Alu 1 301 -11 215 281 53 0 chr10 4576722 4576779 -135739986 + MIR SINE MIR 25 84 -178 2478 86 0 9 chr10 4577206 4577521 -135739244 + AluSq SINE Alu 2 313 0 272 222 9 0 chr10 4578330 4578438 -135738327 + (TG)n Simple_repeat Simple_repeat 1 109 0 396 271 0 0 chr10 4578473 4578643 -135738122 + (TG)n Simple_repeat Simple_repeat 2 171 0 1887 132 184 8 chr10 4578698 4579062 -135737703 - MSTA LTR MaLR 0 428 1 2270 89 0 0 chr10 4579240 4579544 -135737221 + AluY SINE Alu 1 304 0 200 303 26 0 chr10 4580917 4580993 -135735772 + MIR SINE MIR 184 261 -1 2317 107 0 0 chr10 4582120 4582411 -135734354 - AluSg SINE Alu -19 291 1 4008 210 35 79 chr10 4584540 4584653 -135732112 + L1MC/D LINE L1 4054 4170 -2028 2351 105 0 0 chr10 4584653 4584957 -135731808 + AluSg SINE Alu 1 304 -6 4008 210 35 79 chr10 4584957 4585954 -135730811 + L1MC/D LINE L1 4170 5073 -1125 1338 115 5 0 chr10 4585954 4586154 -135730611 - L1PB2 LINE L1 -2 6149 5949 4008 210 35 79 chr10 4586154 4586521 -135730244 + L1MC/D LINE L1 5073 5455 -743 208 283 75 17 chr10 4586752 4586872 -135729893 + L2 LINE L2 3146 3272 0 37 0 0 0 chr10 4588085 4588122 -135728643 + GC_rich Low_complexity Low_complexity 1 37 0 182 296 91 0 chr10 4588596 4588684 -135728081 - L2 LINE L2 -914 2400 2305 278 316 0 13 chr10 4588786 4588862 -135727903 + MER119 DNA MER1_type 2 76 -507 1165 172 39 19 chr10 4588865 4589121 -135727644 + L1ME3A LINE L1 5357 5617 -561 758 227 35 10 chr10 4589844 4590042 -135726723 - L1MA6 LINE L1 -155 6145 5943 258 207 2 32 chr10 4590248 4590311 -135726454 - MIR SINE MIR -87 121 59 214 330 35 26 chr10 4590721 4590836 -135725929 - MIR SINE MIR -56 152 37 991 134 0 0 chr10 4591392 4591534 -135725231 + AluSg/x SINE Alu 166 307 -5 2334 105 0 0 chr10 4592765 4593059 -135723706 + AluSg SINE Alu 1 294 -16 4627 134 89 66 chr10 4594126 4595568 -135721197 + pTR5 LTR ERV1 66 2438 0 194 297 195 0 chr10 4596254 4596372 -135720393 - MIR SINE MIR -17 245 105 254 314 57 0 chr10 4596699 4596804 -135719961 + MLT1J1 LTR MaLR 1 111 -335 402 261 137 12 chr10 4596814 4596975 -135719790 + MLT1J2 LTR MaLR 156 336 -114 233 222 269 19 chr10 4597915 4598023 -135718742 - L1ME4a LINE L1 0 6121 5987 182 328 0 0 chr10 4598357 4598415 -135718350 - L2 LINE L2 0 3272 3215 395 332 156 17 chr10 4598664 4599016 -135717749 - L2 LINE L2 -42 3230 2830 209 321 138 0 chr10 4599277 4599386 -135717379 - L2 LINE L2 -793 2521 2398 648 294 66 45 chr10 4600109 4600398 -135716367 + L2 LINE L2 3019 3313 0 394 264 40 34 chr10 4600912 4601060 -135715705 + L1ME3A LINE L1 5995 6143 -27 655 233 87 36 chr10 4601114 4601333 -135715432 + L1ME3A LINE L1 5707 5936 -234 343 231 154 15 chr10 4601377 4601507 -135715258 + L1ME3A LINE L1 6020 6167 -3 189 318 102 0 chr10 4602278 4602382 -135714383 + MIR SINE MIR 18 135 -73 28 0 0 0 chr10 4603514 4603542 -135713223 + AT_rich Low_complexity Low_complexity 1 28 0 221 0 35 0 chr10 4603959 4603988 -135712777 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 259 240 144 89 chr10 4603993 4604139 -135712626 + MIR3 SINE MIR 39 192 -16 570 288 0 0 chr10 4604946 4605078 -135711687 + MIR SINE MIR 103 234 -28 265 258 148 13 chr10 4605913 4606068 -135710697 - MIR3 SINE MIR -16 192 17 234 105 0 0 chr10 4606843 4606881 -135709884 + (TAAAG)n Simple_repeat Simple_repeat 2 39 0 313 248 44 58 chr10 4606933 4607070 -135709695 + L1ME4a LINE L1 5962 6096 -25 251 309 74 19 chr10 4607336 4607495 -135709270 - MIR3 SINE MIR -25 183 8 2525 121 3 3 chr10 4607922 4608286 -135708479 + THE1B LTR MaLR 1 364 0 348 247 37 0 chr10 4608355 4608436 -135708329 - MER5A DNA MER1_type -68 121 38 229 268 71 0 chr10 4608461 4608517 -135708248 + L2 LINE L2 3162 3221 -51 232 277 84 12 chr10 4609537 4609620 -135707145 - MIR SINE MIR -70 192 104 321 283 121 39 chr10 4609624 4611069 -135705696 + L1M4 LINE L1 3051 4677 -1469 245 216 0 0 chr10 4611079 4611130 -135705635 + L1ME2 LINE L1 6072 6122 -42 193 373 56 32 chr10 4611762 4611888 -135704877 - L2 LINE L2 -5 3267 3139 997 203 30 70 chr10 4612087 4612417 -135704348 + L1MA7 LINE L1 5961 6277 -14 1880 144 7 0 chr10 4612506 4612812 -135703953 - AluJo SINE Alu -4 308 1 277 238 16 16 chr10 4613391 4613454 -135703311 - L2 LINE L2 -9 3263 3201 1965 132 0 0 chr10 4613468 4613741 -135703024 + AluSx SINE Alu 39 311 -1 1051 262 122 10 chr10 4614336 4614741 -135702024 + L1MC/D LINE L1 3742 4213 -1933 282 29 0 0 chr10 4614741 4614776 -135701989 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1051 262 122 10 chr10 4614776 4614863 -135701902 + L1MC/D LINE L1 4213 4289 -1857 2423 86 0 0 chr10 4614890 4615191 -135701574 + AluSc SINE Alu 3 303 -6 1413 193 45 0 chr10 4615194 4615458 -135701307 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr10 4615468 4615500 -135701265 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2538 240 51 22 chr10 4615500 4616207 -135700558 + L1MC/D LINE L1 4321 5071 -1249 5224 82 1 0 chr10 4616207 4616900 -135699865 - L1PA8A LINE L1 -12 6119 5426 2538 240 51 22 chr10 4616900 4617420 -135699345 + L1MC/D LINE L1 5071 5575 -745 321 89 0 0 chr10 4620434 4620479 -135696286 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr10 4620648 4620671 -135696094 + AT_rich Low_complexity Low_complexity 1 23 0 1144 259 102 35 chr10 4621288 4621894 -135694871 - MER20B DNA MER1_type -90 693 47 355 320 31 73 chr10 4622004 4622457 -135694308 + L2 LINE L2 1983 2416 -898 627 207 0 0 chr10 4623070 4623210 -135693555 + (TG)n Simple_repeat Simple_repeat 1 140 0 729 246 67 56 chr10 4623342 4623713 -135693052 + Charlie4a DNA MER1_type 43 421 -1540 1588 154 75 27 chr10 4623713 4624005 -135692760 - AluJo SINE Alu -6 306 1 729 246 67 56 chr10 4624005 4624063 -135692702 + Charlie4a DNA MER1_type 421 477 -31 652 251 6 6 chr10 4624256 4624419 -135692346 + MLT1C LTR MaLR 305 467 0 2028 241 51 40 chr10 4624423 4625249 -135691516 + MLT1C-int LTR MaLR 5 884 -487 893 217 30 146 chr10 4625454 4625920 -135690845 + MLT1C-int LTR MaLR 959 1370 -1 355 185 70 135 chr10 4625927 4626127 -135690638 + MLT1C LTR MaLR 7 193 -197 281 254 77 77 chr10 4626266 4626409 -135690356 + MLT1K LTR MaLR 328 473 -115 13919 82 11 1 chr10 4626409 4629104 -135687661 + L1PA7 LINE L1 3440 6154 0 281 254 77 77 chr10 4629104 4629180 -135687585 + MLT1K LTR MaLR 472 547 -41 188 336 40 24 chr10 4629363 4629488 -135687277 - MIR3 SINE MIR -43 165 39 920 9 0 0 chr10 4629743 4629848 -135686917 + L1PA3 LINE L1 6050 6154 -1 207 204 0 0 chr10 4629862 4629906 -135686859 + A-rich Low_complexity Low_complexity 1 44 0 441 273 239 14 chr10 4629933 4630222 -135686543 - L2 LINE L2 0 3272 2919 2575 47 0 22 chr10 4630946 4631264 -135685501 + AluY SINE Alu 1 311 0 2667 206 8 2 chr10 4631408 4631936 -135684829 + MER41D LTR ERV1 1 531 -26 26 0 0 0 chr10 4631979 4632005 -135684760 + AT_rich Low_complexity Low_complexity 1 26 0 227 152 0 0 chr10 4632338 4632384 -135684381 - L1ME3 LINE L1 -7 6155 6110 2393 255 129 27 chr10 4632453 4634648 -135682117 - L1ME3 LINE L1 -197 5967 3497 316 171 103 51 chr10 4634767 4634884 -135681881 - L1ME3 LINE L1 -2863 3283 3161 487 265 10 25 chr10 4634887 4635091 -135681674 - L1ME3 LINE L1 -3090 3056 2856 233 238 25 0 chr10 4635189 4635269 -135681496 - L1ME3 LINE L1 -3227 2919 2838 2119 117 10 13 chr10 4635426 4635733 -135681032 - AluSx SINE Alu -2 310 5 21 0 0 0 chr10 4638145 4638166 -135678599 + AT_rich Low_complexity Low_complexity 1 21 0 506 255 93 32 chr10 4638682 4638929 -135677836 - MIR SINE MIR 0 262 1 192 394 0 14 chr10 4641347 4641418 -135675347 - L2 LINE L2 -86 3186 3117 334 228 196 19 chr10 4643035 4643193 -135673572 - MER5A DNA MER1_type 0 189 4 7924 232 65 52 chr10 4644405 4645038 -135671727 - L1MC3 LINE L1 -2 7783 7160 1450 58 0 0 chr10 4645038 4645209 -135671556 + AluY SINE Alu 1 171 -140 251 91 0 0 chr10 4645210 4645273 -135671492 + AluY SINE Alu 253 315 0 7924 232 65 52 chr10 4645273 4647105 -135669660 - L1MC3 LINE L1 -625 7160 5353 1996 131 40 0 chr10 4647105 4647279 -135669486 - AluSx SINE Alu -3 309 117 270 0 0 0 chr10 4647279 4647309 -135669456 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1996 131 40 0 chr10 4647309 4647431 -135669334 - AluSx SINE Alu -195 117 1 7924 232 65 52 chr10 4647431 4647783 -135668982 - L1MC3 LINE L1 -2432 5353 5007 1230 138 20 5 chr10 4647783 4647986 -135668779 - L1PB1 LINE L1 -1 6150 5945 7924 232 65 52 chr10 4647986 4649291 -135667474 - L1MC3 LINE L1 -2778 5007 3564 895 232 34 0 chr10 4649398 4649661 -135667104 + L1MA4 LINE L1 6025 6296 -4 290 240 145 70 chr10 4649818 4650018 -135666747 - HAL1 LINE L1 -2288 219 5 233 239 128 60 chr10 4650976 4651093 -135665672 + MER69 DNA AcHobo 1 125 -2401 25 0 0 0 chr10 4652684 4652709 -135664056 + AT_rich Low_complexity Low_complexity 1 25 0 205 202 0 146 chr10 4655297 4655386 -135661379 - L2 LINE L2 -514 2800 2725 23 33 0 0 chr10 4655604 4655634 -135661131 + AT_rich Low_complexity Low_complexity 1 30 0 288 294 15 0 chr10 4655644 4655712 -135661053 - MIR3 SINE MIR -24 184 116 248 151 0 19 chr10 4656051 4656104 -135660661 + GA-rich Low_complexity Low_complexity 1 52 0 39 38 0 0 chr10 4656717 4656770 -135659995 + AT_rich Low_complexity Low_complexity 1 53 0 238 210 110 60 chr10 4657701 4657801 -135658964 + MIR3 SINE MIR 83 187 -21 674 239 54 84 chr10 4657877 4658212 -135658553 - MER46C DNA MER2_type -13 325 1 1716 189 20 3 chr10 4658624 4658974 -135657791 - MER89 LTR ERV1 -4 555 200 766 192 26 6 chr10 4658997 4659153 -135657612 - FRAM SINE Alu -17 159 1 1253 278 91 25 chr10 4660272 4660757 -135656008 - LTR40a LTR ERVL 0 519 3 278 231 0 0 chr10 4660762 4660814 -135655951 - HERVL40 LTR ERVL -35 5495 5444 276 291 110 8 chr10 4660967 4661094 -135655671 + MER58B DNA MER1_type 199 338 -3 349 102 169 0 chr10 4661614 4661673 -135655092 - MER85 DNA T2_type -66 73 5 493 291 89 11 chr10 4661675 4661854 -135654911 + HERVL40 LTR ERVL 1219 1411 -4119 420 20 0 0 chr10 4662030 4662079 -135654686 + MER85 DNA T2_type 89 137 -2 1902 138 22 38 chr10 4663305 4663627 -135653138 - L1MB3 LINE L1 -4 6179 5862 2104 109 3 0 chr10 4663627 4663920 -135652845 + AluSx SINE Alu 1 294 -18 1902 138 22 38 chr10 4663920 4663966 -135652799 - L1MB3 LINE L1 -321 5862 5817 204 355 16 32 chr10 4666169 4666293 -135650472 - MIR SINE MIR -112 150 29 2366 116 16 13 chr10 4666401 4666773 -135649992 + THE1C LTR MaLR 3 375 0 381 158 0 0 chr10 4671310 4671392 -135645373 + GA-rich Low_complexity Low_complexity 2 83 0 23 0 0 0 chr10 4672382 4672405 -135644360 + AT_rich Low_complexity Low_complexity 1 23 0 3727 143 40 22 chr10 4672407 4673127 -135643638 - L1MA7 LINE L1 -3 6288 5556 2821 293 52 52 chr10 4673135 4674545 -135642220 - L1M3b LINE L1 -4870 1411 1 1392 257 84 53 chr10 4675969 4677089 -135639676 + L1MB7 LINE L1 2 1334 -5208 1238 219 23 23 chr10 4677092 4677394 -135639371 + MER21B-int LTR ERV1 3848 4149 -42 3334 236 47 20 chr10 4677469 4678299 -135638466 + MER21B LTR ERV1 1 852 -11 2063 236 36 51 chr10 4678308 4679089 -135637676 + L1MB7 LINE L1 1325 2093 -4553 258 32 0 0 chr10 4679120 4679151 -135637614 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr10 4679150 4679176 -135637589 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 875 228 0 0 chr10 4679247 4679414 -135637351 - MLT2C1 LTR ERVL -61 336 170 3972 205 59 19 chr10 4679415 4680377 -135636388 + L1MC2 LINE L1 5344 6344 0 3726 230 40 37 chr10 4680368 4680975 -135635790 + L1MB7 LINE L1 5186 5789 -893 * 1973 129 7 14 chr10 4680975 4681270 -135635495 + AluSx SINE Alu 7 299 -13 3726 230 40 37 chr10 4681270 4682119 -135634646 + L1MB7 LINE L1 5789 6662 -20 30 45 0 0 chr10 4682722 4682766 -135633999 + AT_rich Low_complexity Low_complexity 1 44 0 684 209 19 28 chr10 4685559 4685770 -135630995 - Charlie5 DNA MER1_type -15 2597 2389 246 105 0 0 chr10 4685783 4685821 -135630944 + (TA)n Simple_repeat Simple_repeat 1 38 0 424 251 123 25 chr10 4686150 4686385 -135630380 - LTR16A LTR ERVL -161 289 32 428 220 10 0 chr10 4686446 4686546 -135630219 + L1MA9 LINE L1 6047 6147 -165 942 76 52 6 chr10 4686566 4686738 -135630027 + GA-rich Low_complexity Low_complexity 1 180 0 267 79 0 0 chr10 4686738 4686776 -135629989 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 301 215 118 0 chr10 4686799 4686892 -135629873 + L1MA9 LINE L1 6170 6273 -39 261 315 55 20 chr10 4688065 4688211 -135628554 + MLT1L LTR MaLR 465 615 0 25 0 0 0 chr10 4688318 4688343 -135628422 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr10 4689038 4689085 -135627680 + AT_rich Low_complexity Low_complexity 1 47 0 1927 156 0 10 chr10 4689139 4689440 -135627325 - AluJb SINE Alu -14 298 1 2236 156 46 5 chr10 4689465 4689876 -135626889 + MSTA LTR MaLR 1 428 0 350 290 194 53 chr10 4689876 4690535 -135626230 + L1M4 LINE L1 2735 3486 -2660 4881 138 32 43 chr10 4690639 4691548 -135625217 - MER49 LTR ERV1 -24 899 1 1907 239 102 47 chr10 4691692 4692094 -135624671 - L1MC4 LINE L1 -343 7699 7320 1951 143 50 34 chr10 4692094 4692452 -135624313 + THE1B LTR MaLR 1 364 0 1907 239 102 47 chr10 4692452 4692788 -135623977 - L1MC4 LINE L1 -722 7320 6921 22 35 0 0 chr10 4692790 4692819 -135623946 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 4693123 4693152 -135623613 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr10 4695310 4695338 -135621427 + AT_rich Low_complexity Low_complexity 1 28 0 7659 33 3 1 chr10 4695338 4696268 -135620497 - L1PA3 LINE L1 -3 6152 5210 544 295 108 38 chr10 4696532 4696901 -135619864 - L2 LINE L2 0 3313 2919 382 264 9 9 chr10 4696966 4697076 -135619689 + L2 LINE L2 2154 2263 -1051 959 134 210 0 chr10 4697262 4697448 -135619317 + AluSp SINE Alu 83 307 -6 1423 158 36 43 chr10 4698480 4698759 -135618006 - AluJo SINE Alu -19 293 17 369 320 51 37 chr10 4699672 4699804 -135616961 - L1ME LINE L1 -338 5783 5654 2193 96 4 0 chr10 4699804 4700112 -135616653 - AluSg SINE Alu 0 309 1 369 320 51 37 chr10 4700112 4700272 -135616493 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr10 4700342 4700364 -135616401 + AT_rich Low_complexity Low_complexity 1 22 0 396 252 176 25 chr10 4700769 4700928 -135615837 - MIR SINE MIR -4 258 76 236 260 39 0 chr10 4701042 4701119 -135615646 - MER116 DNA Mariner 0 80 1 23 78 0 0 chr10 4701146 4701197 -135615568 + AT_rich Low_complexity Low_complexity 1 51 0 1467 280 83 26 chr10 4701293 4702050 -135614715 + L1M4 LINE L1 3758 4557 -1589 282 303 92 26 chr10 4702769 4702921 -135613844 - HERV16 LTR ERVL -3819 1177 1016 297 326 64 35 chr10 4703287 4703459 -135613306 - MIR SINE MIR -71 191 15 298 319 6 75 chr10 4703715 4703875 -135612890 + MER5A DNA MER1_type 35 183 -6 189 107 0 0 chr10 4706599 4706627 -135610138 + (T)n Simple_repeat Simple_repeat 1 28 0 272 260 250 0 chr10 4707314 4707414 -135609351 - L2 LINE L2 0 3313 3189 29 28 0 0 chr10 4707648 4707684 -135609081 + AT_rich Low_complexity Low_complexity 1 36 0 363 282 99 42 chr10 4708057 4708199 -135608566 - MER5B DNA MER1_type -27 151 2 447 263 67 89 chr10 4710291 4710750 -135606015 - MLT1E LTR MaLR -101 534 1 1301 270 20 5 chr10 4710750 4711154 -135605611 + L1M4 LINE L1 3718 4127 -2019 852 167 0 0 chr10 4711156 4711282 -135605483 + AluJb SINE Alu 164 289 -23 445 234 138 5 chr10 4711289 4711477 -135605288 + L1M4 LINE L1 4626 4838 -1308 228 284 75 75 chr10 4711721 4711855 -135604910 + MLT1H LTR MaLR 400 533 -16 192 77 0 0 chr10 4712383 4712409 -135604356 + (A)n Simple_repeat Simple_repeat 1 26 0 4361 164 73 32 chr10 4712953 4713839 -135602926 + MER49 LTR ERV1 1 923 0 401 282 34 0 chr10 4713965 4714024 -135602741 - L1MA10 LINE L1 -1 6333 6275 1371 258 38 21 chr10 4714024 4714500 -135602265 - L1ME1 LINE L1 -54 6112 5629 697 207 14 7 chr10 4714523 4714663 -135602102 + MLT1A1 LTR MaLR 1 141 -224 2262 51 0 0 chr10 4714694 4714970 -135601795 - L1PA5 LINE L1 -13 6141 5866 1435 64 30 0 chr10 4714970 4715173 -135601592 + L1P LINE L1 5195 5403 -743 1334 160 26 0 chr10 4715183 4715414 -135601351 + MLT1A1 LTR MaLR 127 363 -2 305 303 111 25 chr10 4715414 4715576 -135601189 - L1ME1 LINE L1 -547 5615 5440 947 198 70 107 chr10 4715585 4715777 -135600988 - L1ME1 LINE L1 -1117 5029 4831 864 181 45 77 chr10 4715777 4715998 -135600767 + MER20 DNA MER1_type 2 215 -4 947 198 70 107 chr10 4715998 4716234 -135600531 - L1ME1 LINE L1 -1315 4831 4617 6233 258 52 34 chr10 4716240 4716643 -135600122 - L1M4 LINE L1 -1300 4846 4452 1580 194 0 14 chr10 4716643 4716927 -135599838 - AluJo SINE Alu -32 280 1 6233 258 52 34 chr10 4716927 4719207 -135597558 - L1M4 LINE L1 -1694 4452 2113 1060 303 125 8 chr10 4719224 4720177 -135596588 - L1MDa LINE L1 -5313 1227 20 367 151 40 0 chr10 4720698 4720824 -135595941 + (TA)n Simple_repeat Simple_repeat 2 132 0 3795 152 102 67 chr10 4720824 4721695 -135595070 + MER21A LTR ERV1 13 914 -17 34 42 0 0 chr10 4722023 4722071 -135594694 + AT_rich Low_complexity Low_complexity 1 48 0 189 195 0 0 chr10 4723100 4723141 -135593624 + (TG)n Simple_repeat Simple_repeat 2 42 0 379 257 36 12 chr10 4723227 4723455 -135593310 + L1ME LINE L1 1352 1747 -4951 1064 240 86 17 chr10 4723484 4723911 -135592854 + L1ME LINE L1 5813 6286 -675 189 0 0 0 chr10 4723911 4723932 -135592833 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1064 240 86 17 chr10 4723932 4724142 -135592623 + L1ME LINE L1 6286 6480 -481 1663 168 44 3 chr10 4724220 4724757 -135592008 + LTR26 LTR ERV1 1 603 0 1948 241 109 21 chr10 4724771 4725403 -135591362 - MER76 LTR ERV 0 688 1 23 0 0 0 chr10 4727313 4727336 -135589429 + AT_rich Low_complexity Low_complexity 1 23 0 261 218 0 0 chr10 4727902 4727957 -135588808 + C-rich Low_complexity Low_complexity 1 55 0 447 150 0 0 chr10 4728123 4728203 -135588562 + L1MA3 LINE L1 6226 6305 0 2227 116 0 19 chr10 4730052 4730371 -135586394 + AluSq SINE Alu 1 313 0 410 355 133 33 chr10 4730856 4731617 -135585148 - L2 LINE L2 -411 2903 2067 2054 221 12 0 chr10 4731851 4732250 -135584515 - LTR57 LTR ERVL 0 411 8 1558 275 67 28 chr10 4732482 4733587 -135583178 + L1MCc LINE L1 1215 2563 -4559 2117 201 21 23 chr10 4733590 4734122 -135582643 - L1MA9 LINE L1 -1 6311 5781 1333 268 47 32 chr10 4734122 4734379 -135582386 + L1MCc LINE L1 2863 3115 -3826 683 216 31 0 chr10 4734379 4734541 -135582224 + L1MB7 LINE L1 6010 6176 -8 1333 268 47 32 chr10 4734541 4735142 -135581623 + L1MCc LINE L1 3115 3698 -3243 3921 189 15 11 chr10 4735874 4736615 -135580150 + L1PA13 LINE L1 1121 1864 -4923 268 299 49 56 chr10 4736651 4736795 -135579970 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4738688 4738920 -135577845 - L1MA8 LINE L1 -41 6250 5995 732 161 14 21 chr10 4739590 4739733 -135577032 + FRAM SINE Alu 11 152 -24 263 48 0 48 chr10 4740370 4740412 -135576353 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 245 83 33 33 chr10 4740424 4740484 -135576281 + (TTCTCC)n Simple_repeat Simple_repeat 4 63 0 184 30 61 0 chr10 4740707 4740740 -135576025 + T-rich Low_complexity Low_complexity 1 35 0 265 196 20 0 chr10 4740960 4741011 -135575754 - MLT1G1 LTR MaLR 0 595 544 22 35 0 0 chr10 4741279 4741308 -135575457 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 4741334 4741376 -135575389 + AT_rich Low_complexity Low_complexity 1 42 0 255 257 0 0 chr10 4741403 4741504 -135575261 + (TG)n Simple_repeat Simple_repeat 1 101 0 265 362 0 9 chr10 4743127 4743232 -135573533 - MIR3 SINE MIR -10 198 95 2032 205 66 5 chr10 4743478 4743887 -135572878 - MER70A LTR ERVL 0 472 39 303 93 0 0 chr10 4743898 4743941 -135572824 + (TG)n Simple_repeat Simple_repeat 2 44 0 206 312 80 24 chr10 4745958 4746083 -135570682 - L2 LINE L2 -2 3311 3180 773 305 33 63 chr10 4746776 4747205 -135569560 + L2 LINE L2 2898 3313 0 211 333 0 0 chr10 4747927 4747990 -135568775 - L2 LINE L2 0 3272 3210 1738 188 7 0 chr10 4748574 4748883 -135567882 + AluJb SINE Alu 2 312 0 36 0 0 0 chr10 4750866 4750902 -135565863 + AT_rich Low_complexity Low_complexity 1 36 0 2541 44 0 0 chr10 4751470 4751766 -135564999 + AluY SINE Alu 2 297 -14 302 301 0 49 chr10 4752017 4752140 -135564625 - MIR SINE MIR -70 192 76 2377 126 30 13 chr10 4752818 4753214 -135563551 - MER57A LTR ERV1 0 403 1 214 273 13 39 chr10 4754341 4754418 -135562347 + MIR SINE MIR 66 140 -68 356 319 76 38 chr10 4755273 4755590 -135561175 - L1M4 LINE L1 -1627 4519 4191 1034 244 78 36 chr10 4755602 4756024 -135560741 - MLT1C LTR MaLR 0 467 17 881 164 56 119 chr10 4756054 4756323 -135560442 - MLT1C-int LTR MaLR -1 1370 1119 1375 294 83 45 chr10 4756326 4756933 -135559832 - L1ME LINE L1 -4600 1480 898 2128 133 3 0 chr10 4756933 4757241 -135559524 - AluSx SINE Alu -3 309 1 1375 294 83 45 chr10 4757241 4758057 -135558708 - L1ME LINE L1 -5182 898 6 34 42 0 0 chr10 4758888 4758936 -135557829 + AT_rich Low_complexity Low_complexity 1 48 0 390 245 109 43 chr10 4759557 4759741 -135557024 + MIR SINE MIR 53 248 -14 21 0 0 0 chr10 4759785 4759806 -135556959 + AT_rich Low_complexity Low_complexity 1 21 0 1883 242 7 4 chr10 4760340 4761259 -135555506 + L1MB7 LINE L1 5 1061 -5481 1671 249 54 7 chr10 4761293 4761734 -135555031 + MLT1C LTR MaLR 6 467 0 2835 251 95 41 chr10 4761739 4762494 -135554271 + L1MB7 LINE L1 1201 1913 -4731 1657 189 0 11 chr10 4762494 4762779 -135553986 + AluJb SINE Alu 1 282 -30 2835 251 95 41 chr10 4762779 4764441 -135552324 + L1MB7 LINE L1 1913 3749 -2895 1277 226 22 38 chr10 4764451 4764769 -135551996 + MLT1A1 LTR MaLR 11 323 -42 5464 224 69 39 chr10 4764789 4767610 -135549155 + L1MB7 LINE L1 3754 6659 -23 1276 168 5 23 chr10 4767623 4767843 -135548922 + AluSx SINE Alu 1 216 -96 945 140 0 0 chr10 4767843 4767993 -135548772 + AluSg/x SINE Alu 154 303 -9 196 368 58 32 chr10 4768294 4768449 -135548316 - MIR SINE MIR -39 223 65 1503 174 102 7 chr10 4769650 4769954 -135546811 + MER1B DNA MER1_type 4 336 -1 2059 126 0 0 chr10 4771333 4771619 -135545146 - AluSx SINE Alu -23 289 4 323 308 8 15 chr10 4771895 4772025 -135544740 + GA-rich Low_complexity Low_complexity 2 130 0 2146 122 10 0 chr10 4773043 4773339 -135543426 + AluSc SINE Alu 1 299 -10 6238 158 54 6 chr10 4774047 4775221 -135541544 + Tigger3b DNA MER2_type 1 1230 -1 271 219 16 65 chr10 4775256 4775379 -135541386 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 349 236 0 50 chr10 4775923 4776105 -135540660 - L1ME4a LINE L1 -11 6110 5938 27 49 0 0 chr10 4776138 4776179 -135540586 + AT_rich Low_complexity Low_complexity 1 41 0 1106 228 114 17 chr10 4776795 4777155 -135539610 + MSTD LTR MaLR 1 395 -1 225 233 133 27 chr10 4777870 4778020 -135538745 + L1 LINE L1 4899 5064 -1082 21 0 0 0 chr10 4778342 4778363 -135538402 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4779278 4779304 -135537461 + AT_rich Low_complexity Low_complexity 1 26 0 34 79 0 0 chr10 4779726 4779802 -135536963 + AT_rich Low_complexity Low_complexity 1 76 0 201 286 0 0 chr10 4782334 4782383 -135534382 + L2 LINE L2 3139 3187 -85 592 263 100 20 chr10 4783936 4784187 -135532578 + MLT1F1 LTR MaLR 2 272 -295 2066 103 7 35 chr10 4784452 4784762 -135532003 - AluSx SINE Alu 0 312 12 875 284 81 86 chr10 4786772 4787775 -135528990 - L2 LINE L2 -27 3286 2296 2700 160 15 6 chr10 4787880 4788355 -135528410 - MER4B LTR ERV1 0 610 132 943 309 42 32 chr10 4788621 4789483 -135527282 + L1MCa LINE L1 971 2048 -4559 2117 201 21 23 chr10 4789486 4790018 -135526747 - L1MA9 LINE L1 -1 6311 5781 1323 268 47 32 chr10 4790018 4790275 -135526490 + L1MCa LINE L1 2348 2600 -3826 683 216 31 0 chr10 4790275 4790437 -135526328 + L1MB7 LINE L1 6010 6176 -8 1323 268 47 32 chr10 4790437 4791038 -135525727 + L1MCa LINE L1 2600 3183 -3243 3973 188 13 11 chr10 4791757 4792506 -135524259 + L1PA13 LINE L1 1114 1864 -4923 268 299 49 56 chr10 4792542 4792686 -135524079 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4794580 4794812 -135521953 - L1MA8 LINE L1 -41 6250 5995 748 167 7 21 chr10 4795482 4795626 -135521139 + FRAM SINE Alu 11 152 -24 22 35 0 0 chr10 4796403 4796432 -135520333 + AT_rich Low_complexity Low_complexity 1 29 0 394 261 84 14 chr10 4796563 4796705 -135520060 - MIR3 SINE MIR -33 175 24 204 97 0 0 chr10 4797373 4797404 -135519361 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr10 4797684 4797706 -135519059 + AT_rich Low_complexity Low_complexity 1 22 0 277 371 9 0 chr10 4798176 4798281 -135518484 - MER5A DNA MER1_type -80 109 4 352 304 76 49 chr10 4798292 4798476 -135518289 + MER5A DNA MER1_type 1 189 0 820 140 47 0 chr10 4798719 4798869 -135517896 - MER5A DNA MER1_type -22 167 11 28 29 0 0 chr10 4799376 4799411 -135517354 + AT_rich Low_complexity Low_complexity 1 35 0 984 211 122 96 chr10 4799938 4800361 -135516404 - MER66A LTR ERV1 -5 579 179 2101 147 0 0 chr10 4800361 4800673 -135516092 - AluSx SINE Alu 0 312 1 984 211 122 96 chr10 4800673 4800759 -135516006 - MER66A LTR ERV1 -405 179 97 642 296 32 20 chr10 4800825 4801166 -135515599 - L1MC/D LINE L1 -2172 5636 5292 1998 132 3 0 chr10 4801339 4801635 -135515130 + AluSc SINE Alu 1 297 -12 473 268 81 4 chr10 4801868 4802114 -135514651 - L1MC/D LINE L1 -2817 3329 3065 384 220 18 9 chr10 4802143 4802252 -135514513 + L1ME LINE L1 5000 5109 -1037 301 97 0 88 chr10 4802402 4802515 -135514250 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1606 223 26 37 chr10 4802521 4803050 -135513715 + L1ME LINE L1 5157 5683 -483 2280 82 0 22 chr10 4804616 4804961 -135511804 - L1PA8 LINE L1 -2 6170 5838 21 0 0 0 chr10 4805110 4805131 -135511634 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 4806419 4806447 -135510318 + AT_rich Low_complexity Low_complexity 1 28 0 245 322 0 11 chr10 4807486 4807576 -135509189 + (CA)n Simple_repeat Simple_repeat 1 89 0 232 233 17 0 chr10 4807728 4807788 -135508977 - MLT1G1 LTR MaLR 0 595 535 23 0 0 0 chr10 4808355 4808378 -135508387 + AT_rich Low_complexity Low_complexity 1 23 0 2221 113 7 0 chr10 4808565 4808856 -135507909 + AluSc SINE Alu 6 298 -11 296 204 12 74 chr10 4808937 4809099 -135507666 + L1MEd LINE L1 1065 1216 -4903 200 189 0 0 chr10 4809146 4809183 -135507582 + (TG)n Simple_repeat Simple_repeat 2 38 0 2286 91 0 0 chr10 4810688 4810985 -135505780 - AluY SINE Alu -14 297 1 558 269 19 31 chr10 4811735 4811988 -135504777 + MER77 LTR ERV1 450 745 -7 2087 241 55 29 chr10 4812019 4812820 -135503945 + MER77-int LTR ERV1 3261 4130 -61 1365 261 83 23 chr10 4813354 4813871 -135502894 + MER77 LTR ERV1 51 598 -7 286 288 16 16 chr10 4813881 4814006 -135502759 + L1MC4 LINE L1 7434 7558 -484 1632 169 20 30 chr10 4814840 4815141 -135501624 - AluJo SINE Alu -14 298 1 232 211 0 18 chr10 4816231 4816288 -135500477 + A-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr10 4816514 4816536 -135500229 + AT_rich Low_complexity Low_complexity 1 22 0 13426 55 19 3 chr10 4917251 4918900 -135397865 + HERVK14 LTR ERVK 1188 2862 -3083 828 215 52 40 chr10 4918905 4919156 -135397609 - LTR13 LTR ERVK -753 254 1 74304 6 2 3 chr10 4919156 4927282 -135389483 - HERVK13 LTR ERVK 0 8116 1 3800 167 68 67 chr10 4927282 4928235 -135388530 - LTR13 LTR ERVK 0 954 1 354 264 64 9 chr10 4928456 4928566 -135388199 - U8 snRNA snRNA 0 136 21 386 308 0 9 chr10 4930322 4930429 -135386336 + MER68 LTR ERV1 347 452 -110 2213 124 3 0 chr10 4931682 4931989 -135384776 - AluSq SINE Alu -5 308 1 359 62 0 0 chr10 4932572 4932620 -135384145 - pTR5 LTR ERV1 -2046 392 345 8880 94 72 69 chr10 4932720 4935227 -135381538 - pTR5 LTR ERV1 0 8399 504 607 195 43 43 chr10 4935223 4935525 -135381240 - Harlequin LTR ERV1 -5755 1141 840 * 36997 93 21 20 chr10 4935526 4941261 -135375504 - Harlequin LTR ERV1 0 2438 17 28293 42 5 1 chr10 4941362 4944888 -135371877 - L1P2 LINE L1 -695 5460 1921 3634 255 50 32 chr10 4944869 4944965 -135371800 - L1 LINE L1 -2757 3389 3296 * 2026 127 30 10 chr10 4944965 4945265 -135371500 - AluSx SINE Alu -6 306 1 3634 255 50 32 chr10 4945265 4946815 -135369950 - L1 LINE L1 -2850 3296 1670 9009 77 4 2 chr10 4946917 4948059 -135368706 - HERVK14 LTR ERVK -4800 1145 1 2747 61 0 0 chr10 4948059 4948403 -135368362 - LTR14A LTR ERVK 0 344 1 449 260 90 57 chr10 4948421 4948775 -135367990 + L1M4c LINE L1 806 1171 -5213 1252 261 16 13 chr10 4948775 4949081 -135367684 - MST-int LTR MaLR -438 1213 907 36 23 0 0 chr10 4949370 4949413 -135367352 + AT_rich Low_complexity Low_complexity 1 43 0 26 0 0 0 chr10 4950123 4950149 -135366616 + AT_rich Low_complexity Low_complexity 1 26 0 4624 131 57 73 chr10 4950449 4951488 -135365277 + pTR5 LTR ERV1 743 2025 -413 354 172 63 81 chr10 4951488 4951599 -135365166 + LTR30 LTR ERV1 544 724 -70 561 28 42 0 chr10 4951599 4951670 -135365095 + pTR5 LTR ERV1 79 152 -2286 853 264 129 27 chr10 4951670 4951965 -135364800 + L1PA15-16 LINE L1 1237 1561 -5288 3275 244 26 14 chr10 4951995 4952999 -135363766 + L1PA15-16 LINE L1 1598 2705 -4144 33293 46 2 5 chr10 4953108 4957249 -135359516 - L1P LINE L1 -2015 4131 1 6710 204 36 34 chr10 4957249 4958737 -135358028 + HUERS-P3b LTR ERV1 4763 6255 -1163 2080 125 7 3 chr10 4958737 4959032 -135357733 + AluSx SINE Alu 1 296 -16 6710 204 36 34 chr10 4959032 4959230 -135357535 + HUERS-P3b LTR ERV1 6255 6451 -967 1922 199 10 20 chr10 4959343 4959845 -135356920 + HUERS-P3b LTR ERV1 6495 6991 -5 286 187 0 165 chr10 4959869 4959960 -135356805 + MER61E LTR ERV1 36 111 -458 * 506 74 0 25 chr10 4959940 4960021 -135356744 + LTR25 LTR ERV1 215 293 -501 2272 190 69 15 chr10 4960043 4960578 -135356187 + LTR25 LTR ERV1 244 565 -4 231 228 158 40 chr10 4960813 4960914 -135355851 + MIR SINE MIR 150 262 0 2377 87 0 0 chr10 4962321 4962619 -135354146 + AluY SINE Alu 1 298 -13 23 68 0 0 chr10 4962688 4962732 -135354033 + AT_rich Low_complexity Low_complexity 1 44 0 353 350 104 30 chr10 4962867 4963204 -135353561 - L3 LINE CR1 -621 956 595 751 290 70 35 chr10 4963640 4964103 -135352662 + MLT1E LTR MaLR 17 496 -97 1262 295 124 32 chr10 4964301 4965263 -135351502 - L2 LINE L2 -5 3308 2246 853 179 68 8 chr10 4965266 4965500 -135351265 + Tigger1 DNA MER2_type 2171 2418 0 380 276 37 29 chr10 4965515 4965758 -135351007 - L1M4c LINE L1 -3759 2885 2641 6172 190 14 4 chr10 4965827 4967133 -135349632 + L1P5 LINE L1 3795 5114 -1032 29 28 0 0 chr10 4967133 4967169 -135349596 + AT_rich Low_complexity Low_complexity 1 36 0 226 277 0 0 chr10 4967169 4967252 -135349513 + L1 LINE L1 2305 2387 -3759 7918 248 43 7 chr10 4967255 4967836 -135348929 + L1PA16 LINE L1 2440 2999 -3157 2183 108 0 7 chr10 4967836 4968133 -135348632 + AluSg1 SINE Alu 1 295 -14 7918 248 43 7 chr10 4968133 4970532 -135346233 + L1PA16 LINE L1 2999 5534 -622 1417 252 6 6 chr10 4970580 4970945 -135345820 + L1PA16 LINE L1 5784 6148 -18 344 188 36 80 chr10 4971017 4971129 -135345636 - L1M4c LINE L1 -5505 1141 1035 285 258 27 5 chr10 4971180 4971304 -135345461 - L1M4c LINE L1 -5721 925 650 510 144 0 0 chr10 4971654 4971744 -135345021 + L1P5 LINE L1 5420 5509 -647 1966 139 36 0 chr10 4971770 4972071 -135344694 - AluSx SINE Alu 0 312 1 291 176 14 68 chr10 4972071 4972135 -135344630 - U8 snRNA snRNA -74 62 1 2396 94 0 0 chr10 4973908 4974207 -135342558 - AluSg SINE Alu -11 299 1 639 206 75 45 chr10 4974256 4974523 -135342242 - ORSL DNA AcHobo 0 275 1 469 178 22 0 chr10 4975272 4975362 -135341403 - MLT1D LTR MaLR -413 92 1 236 247 124 22 chr10 4976737 4976826 -135339939 + MIR SINE MIR 88 185 -77 202 316 158 0 chr10 4977692 4977806 -135338959 + L3 LINE CR1 1361 1492 -85 926 185 40 0 chr10 4978256 4978429 -135338336 + AluJo SINE Alu 85 264 -48 422 209 39 39 chr10 4978911 4979064 -135337701 - L1M4 LINE L1 -895 5487 5335 1468 237 95 13 chr10 4979066 4979518 -135337247 - ERVL LTR ERVL -5274 490 2 324 0 0 0 chr10 4979557 4979593 -135337172 + (TG)n Simple_repeat Simple_repeat 2 37 0 1662 203 63 5 chr10 4979604 4979641 -135337124 + Tigger1 DNA MER2_type 2018 2051 -367 216 0 0 0 chr10 4979641 4979665 -135337100 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1662 203 63 5 chr10 4979665 4980006 -135336759 + Tigger1 DNA MER2_type 2051 2418 0 1114 245 31 36 chr10 4980045 4980271 -135336494 - L1M4 LINE L1 -3784 2598 2372 1322 212 74 15 chr10 4980271 4980596 -135336169 + MER7A DNA MER2_type 4 345 -1 1114 245 31 36 chr10 4980596 4980966 -135335799 - L1M4 LINE L1 -4010 2372 2002 2207 114 0 7 chr10 4980986 4981284 -135335481 - AluY SINE Alu -15 296 1 1522 249 10 25 chr10 4981327 4981844 -135334921 - L1M4 LINE L1 -4538 1846 1338 673 134 25 17 chr10 4981861 4981980 -135334785 - L1PA15 LINE L1 -2 6163 6044 365 88 118 0 chr10 4981980 4982030 -135334735 + L1PA15 LINE L1 6084 6159 -6 2194 147 47 37 chr10 4982146 4982575 -135334190 + LTR3b LTR ERVK 1 433 -4 12738 129 39 31 chr10 4983017 4985303 -135331462 + MER4-int LTR ERV1 3837 6140 -458 1020 208 21 62 chr10 4985343 4985680 -135331085 - MER31A LTR ERV1 -162 323 1 2683 159 64 12 chr10 4986014 4986580 -135330185 - LTR49 LTR ERV1 0 595 1 248 242 100 23 chr10 4986598 4986617 -135330148 + MER5B DNA MER1_type 59 75 -103 2283 76 0 3 chr10 4986617 4986908 -135329857 + AluY SINE Alu 1 290 -21 248 242 100 23 chr10 4986908 4987005 -135329760 + MER5B DNA MER1_type 75 174 -4 270 159 0 0 chr10 4987637 4987681 -135329084 + LTR32 LTR ERVL 15 58 -413 257 145 194 0 chr10 4987679 4987741 -135329024 + LTR32 LTR ERVL 15 88 -383 * 315 104 224 0 chr10 4987715 4987782 -135328983 + LTR32 LTR ERVL 6 87 -384 238 177 194 0 chr10 4987763 4987825 -135328940 + LTR32 LTR ERVL 15 88 -383 * 277 136 0 0 chr10 4987805 4987849 -135328916 + LTR32 LTR ERVL 15 58 -413 251 145 194 0 chr10 4987847 4987909 -135328856 + LTR32 LTR ERVL 15 88 -383 * 310 115 197 0 chr10 4987889 4987950 -135328815 + LTR32 LTR ERVL 15 87 -384 240 160 60 0 chr10 4987925 4987975 -135328790 + LTR32 LTR ERVL 6 58 -413 * 291 111 0 0 chr10 4987972 4988017 -135328748 + LTR32 LTR ERVL 14 58 -413 288 120 60 0 chr10 4988009 4988059 -135328706 + LTR32 LTR ERVL 6 58 -413 * 657 219 26 7 chr10 4988097 4988248 -135328517 + LTR32 LTR ERVL 232 385 -86 2426 162 41 9 chr10 4989196 4989635 -135327130 - MER6 DNA MER2_type -411 454 2 695 252 59 50 chr10 4990121 4990462 -135326303 + L1MC4 LINE L1 7498 7841 -201 20641 58 9 6 chr10 4990590 4994100 -135322665 - L1PA5 LINE L1 -5 6149 2628 334 183 97 11 chr10 4994100 4994193 -135322572 + MSTB2 LTR MaLR 357 457 0 1420 188 23 31 chr10 4994392 4994615 -135322150 - MLT1A1 LTR MaLR -5 360 140 2236 154 56 5 chr10 4994615 4995024 -135321741 + MSTB1 LTR MaLR 1 430 -2 1420 188 23 31 chr10 4995024 4995152 -135321613 - MLT1A1 LTR MaLR -225 140 12 365 315 124 35 chr10 4995434 4995748 -135321017 + L2 LINE L2 2971 3312 -1 1693 136 23 28 chr10 4996936 4997493 -135319272 - LTR10E LTR ERV1 -21 612 8 5137 2 0 0 chr10 4997498 4998090 -135318675 - L1HS LINE L1 0 6155 5564 14121 48 3 2 chr10 4998190 5000059 -135316706 - L1P LINE L1 -1811 4335 2466 1663 62 0 37 chr10 5000057 5000301 -135316464 - L1P LINE L1 -5359 787 553 * 298 319 37 12 chr10 5000992 5001155 -135315610 + MER92B LTR ERV1 242 408 -228 225 0 48 48 chr10 5001241 5001283 -135315482 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 365 233 43 0 chr10 5001447 5001563 -135315202 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 21 57 0 0 chr10 5001633 5001668 -135315097 + AT_rich Low_complexity Low_complexity 1 35 0 268 210 87 43 chr10 5001765 5001903 -135314862 + Charlie2 DNA MER1_type 2719 2862 0 276 323 0 83 chr10 5002339 5002472 -135314293 - MIR3 SINE MIR -84 124 3 1030 255 75 23 chr10 5002882 5003321 -135313444 + L1ME2 LINE L1 5690 6151 -13 567 231 33 86 chr10 5003883 5004176 -135312589 + L1MC4 LINE L1 6693 7002 -1008 383 222 93 25 chr10 5004196 5004358 -135312407 + L1MC5 LINE L1 7321 7493 -468 321 247 0 0 chr10 5004374 5004471 -135312294 + GA-rich Low_complexity Low_complexity 1 97 0 453 232 116 74 chr10 5004480 5004525 -135312240 + L1MC5 LINE L1 7474 7516 -445 1985 108 58 0 chr10 5004525 5004802 -135311963 + AluSg SINE Alu 1 293 -17 453 232 116 74 chr10 5004802 5005135 -135311630 + L1MC5 LINE L1 7516 7868 -93 5981 150 35 15 chr10 5005153 5006268 -135310497 + HSMAR2 DNA Mariner 2 1138 -164 348 209 29 0 chr10 5006430 5006535 -135310230 + HSMAR2 DNA Mariner 1192 1299 -3 28 71 0 0 chr10 5006549 5006605 -135310160 + AT_rich Low_complexity Low_complexity 1 56 0 241 333 26 0 chr10 5006872 5006986 -135309779 + MLT1L LTR MaLR 173 289 -326 247 173 0 19 chr10 5007167 5007219 -135309546 + MLT1L LTR MaLR 555 605 -10 32 43 0 0 chr10 5007395 5007441 -135309324 + AT_rich Low_complexity Low_complexity 1 46 0 637 281 117 40 chr10 5007647 5008244 -135308521 + L2 LINE L2 1819 2461 -853 393 308 119 13 chr10 5009034 5009193 -135307572 - MIR3 SINE MIR -6 202 27 414 262 0 0 chr10 5009432 5009581 -135307184 + (TG)n Simple_repeat Simple_repeat 2 150 0 10914 92 9 5 chr10 5011074 5012659 -135304106 + HERVFH19I LTR ERV1 3658 5249 -337 1218 164 9 0 chr10 5012658 5012872 -135303893 + HERVFH19I LTR ERV1 7503 7718 -1 * 1194 79 0 0 chr10 5012875 5013040 -135303725 + LTR19B LTR ERV1 3 167 -413 4331 257 21 7 chr10 5013041 5014139 -135302626 - LTR25-int LTR ERV1 -6223 2696 1584 655 222 160 31 chr10 5014128 5014358 -135302407 - LTR25-int LTR ERV1 -1704 4559 2493 * 7063 43 12 0 chr10 5014364 5015617 -135301148 - L1PA4 LINE L1 -5 6150 4886 3365 198 50 28 chr10 5015720 5016534 -135300231 - LTR25-int LTR ERV1 -6162 834 3 2091 177 68 48 chr10 5016543 5017109 -135299656 - LTR25 LTR ERV1 -4 788 251 349 198 0 25 chr10 5017228 5017309 -135299456 - LTR25 LTR ERV1 -501 293 215 330 148 0 148 chr10 5017289 5017377 -135299388 - MER61E LTR ERV1 -458 111 37 * 201 270 81 27 chr10 5018343 5018417 -135298348 + MIR SINE MIR 110 187 -75 555 165 0 0 chr10 5018922 5019007 -135297758 - AluJb SINE Alu -29 283 199 1068 90 0 0 chr10 5019009 5019142 -135297623 + AluSg/x SINE Alu 164 296 -16 696 241 0 0 chr10 5019149 5019282 -135297483 + FLAM_A SINE Alu 1 133 0 1986 147 0 10 chr10 5021011 5021303 -135295462 + AluJo SINE Alu 1 289 -23 2415 55 0 7 chr10 5021317 5021645 -135295120 + AluY SINE Alu 1 311 0 2061 185 19 56 chr10 5022533 5023068 -135293697 - MLT2B1 LTR ERVL 0 520 6 2342 81 10 0 chr10 5023070 5023366 -135293399 + AluSq SINE Alu 1 299 -14 516 271 0 0 chr10 5023378 5023548 -135293217 + (TG)n Simple_repeat Simple_repeat 2 171 0 490 167 83 19 chr10 5024385 5024493 -135292272 - MLT1C LTR MaLR -3 464 350 662 186 87 6 chr10 5024519 5024680 -135292085 - MER104 DNA Tc2 -6 174 1 278 280 200 0 chr10 5025391 5025516 -135291249 - MLT1I LTR MaLR -11 398 249 333 211 0 0 chr10 5025575 5025651 -135291114 + L1 LINE L1 4290 4365 -1781 1313 109 104 0 chr10 5025656 5025877 -135290888 - L1M2 LINE L1 -495 5805 5562 1815 189 35 10 chr10 5026358 5026759 -135290006 + MSTB LTR MaLR 1 411 -15 2383 35 0 18 chr10 5026913 5027226 -135289539 + AluY SINE Alu 1 308 0 180 189 75 38 chr10 5027227 5027280 -135289485 + L2 LINE L2 3255 3309 -4 383 290 138 41 chr10 5028406 5028696 -135288069 - L2 LINE L2 -1 3312 2995 1336 210 14 31 chr10 5029001 5029129 -135287636 + MLT1A1 LTR MaLR 12 141 -224 2241 163 48 5 chr10 5029129 5029541 -135287224 - MSTB1 LTR MaLR -2 430 1 1336 210 14 31 chr10 5029541 5029765 -135287000 + MLT1A1 LTR MaLR 141 358 -7 1699 220 20 18 chr10 5029967 5030362 -135286403 - MSTD LTR MaLR 0 396 1 341 324 103 29 chr10 5031041 5031353 -135285412 + L3 LINE CR1 629 963 -614 1982 37 0 12 chr10 5031623 5031864 -135284901 + AluY SINE Alu 74 311 0 6224 93 27 0 chr10 5032158 5033141 -135283624 - L1PA12 LINE L1 0 6168 5174 198 268 18 0 chr10 5033689 5033745 -135283020 - MIR SINE MIR -52 210 154 22 0 0 0 chr10 5033758 5033780 -135282985 + AT_rich Low_complexity Low_complexity 1 22 0 1905 124 14 40 chr10 5034696 5035050 -135281715 - Tigger2 DNA MER2_type -101 2617 2273 430 171 0 0 chr10 5035039 5035109 -135281656 + MER8 DNA MER2_type 170 239 0 * 263 27 0 27 chr10 5035114 5035151 -135281614 + (TG)n Simple_repeat Simple_repeat 1 36 0 2912 21 0 3 chr10 5035405 5035781 -135280984 - L1P LINE L1 -788 5358 4984 * 9006 30 4 0 chr10 5035779 5036902 -135279863 + L1P LINE L1 3833 4959 -1187 574 294 48 22 chr10 5036904 5037173 -135279592 - HERVL-B3 LTR ERVL -5378 276 1 284 151 50 8 chr10 5037211 5037330 -135279435 + (TA)n Simple_repeat Simple_repeat 2 125 0 1100 268 20 49 chr10 5037387 5037953 -135278812 - MLT2B3 LTR ERVL -50 504 1 8865 187 46 30 chr10 5037993 5040052 -135276713 + Tigger1 DNA MER2_type 4 2095 -323 9541 48 12 0 chr10 5040155 5042057 -135274708 - L1PA6 LINE L1 -151 6003 4076 5160 98 108 33 chr10 5042057 5043145 -135273620 + MER11A LTR ERVK 1 1266 0 2910 55 57 2 chr10 5043145 5043564 -135273201 - L1PA6 LINE L1 -2065 4081 3640 411 141 0 0 chr10 5043563 5043627 -135273138 - L1P LINE L1 -6072 74 11 * 896 239 38 4 chr10 5043642 5043905 -135272860 + Tigger1 DNA MER2_type 2147 2418 0 354 282 37 29 chr10 5043919 5044164 -135272601 - L1M4 LINE L1 -3758 2388 2142 426 167 1 0 chr10 5044171 5044264 -135272501 + L1P5 LINE L1 5416 5509 -647 256 237 66 13 chr10 5044268 5044292 -135272473 - U8 snRNA snRNA -42 94 73 1586 195 4 0 chr10 5044292 5044549 -135272216 - AluSq SINE Alu -55 258 1 256 237 66 13 chr10 5044549 5044600 -135272165 - U8 snRNA snRNA -63 73 15 544 33 55 0 chr10 5045215 5045306 -135271459 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 793 308 27 6 chr10 5047069 5047403 -135269362 + MER68 LTR ERV1 108 448 -114 1340 199 17 52 chr10 5047430 5047717 -135269048 + AluJb SINE Alu 9 285 -27 772 207 38 42 chr10 5048476 5048713 -135268052 - L1PB2 LINE L1 0 6151 5916 11413 209 50 16 chr10 5048854 5053277 -135263488 - L1PB2 LINE L1 -163 6045 1432 2147 114 9 19 chr10 5053277 5053592 -135263173 - AluSx SINE Alu 0 312 1 11413 209 50 16 chr10 5053592 5054144 -135262621 - L1PB2 LINE L1 -4776 1432 900 4599 199 41 33 chr10 5054278 5055858 -135260907 - L1PB2 LINE L1 -5219 985 2 352 241 35 41 chr10 5056367 5056512 -135260253 - L1MC4 LINE L1 -622 7420 7277 22 80 0 0 chr10 5056619 5056669 -135260096 + AT_rich Low_complexity Low_complexity 1 50 0 318 348 36 5 chr10 5056923 5057144 -135259621 - L1MC4 LINE L1 -980 7062 6835 421 198 69 10 chr10 5057600 5057701 -135259064 - MER5A DNA MER1_type -75 114 8 195 379 131 0 chr10 5058129 5058282 -135258483 + MIR3 SINE MIR 3 175 -33 287 284 90 19 chr10 5058437 5058592 -135258173 + MER92B LTR ERV1 374 539 -97 240 281 141 20 chr10 5058820 5059019 -135257746 - Charlie2 DNA MER1_type -2609 253 31 333 208 73 0 chr10 5059544 5059640 -135257125 - ORSL DNA AcHobo -172 103 1 3106 108 82 4 chr10 5060829 5061303 -135255462 - MER9 LTR ERVK 0 511 1 288 270 93 28 chr10 5061682 5061930 -135254835 - L1ME4a LINE L1 -50 6071 5808 255 317 84 42 chr10 5062024 5062166 -135254599 - L2 LINE L2 0 3313 3166 639 291 9 36 chr10 5062206 5062426 -135254339 + LTR40a LTR ERVL 1 214 -305 603 181 9 0 chr10 5062427 5062532 -135254233 - LTR49 LTR ERV1 0 595 490 2152 150 53 3 chr10 5062535 5062895 -135253870 + MER39B LTR ERV1 6 383 -270 1309 232 27 55 chr10 5062898 5063265 -135253500 + MSTB1-int LTR MaLR 1295 1651 0 2064 188 53 14 chr10 5063265 5063681 -135253084 + MSTB1 LTR MaLR 1 432 0 2128 131 25 0 chr10 5064081 5064401 -135252364 - MER75 DNA T2_type 0 514 187 2058 70 11 22 chr10 5064403 5064674 -135252091 + HERVL-A1 LTR ERVL 3645 3912 -1742 * 6984 93 43 6 chr10 5064667 5065651 -135251114 + HERVL-A1 LTR ERVL 4635 5654 0 3201 99 47 0 chr10 5065651 5066038 -135250727 + MLT2A1 LTR ERVL 1 411 -33 195 69 0 0 chr10 5066038 5066067 -135250698 + (TA)n Simple_repeat Simple_repeat 2 30 0 3201 99 47 0 chr10 5066067 5066103 -135250662 + MLT2A1 LTR ERVL 411 444 0 1820 196 15 15 chr10 5066103 5066495 -135250270 + Tigger1 DNA MER2_type 1560 1951 -467 297 276 11 11 chr10 5066498 5066585 -135250180 + Tigger3(Golem) DNA MER2_type 2942 3028 -1 631 264 66 46 chr10 5066587 5066624 -135250141 - L1M4c LINE L1 -4007 2377 2342 1479 170 120 0 chr10 5066624 5066900 -135249865 - AluSx SINE Alu -3 309 1 631 264 66 46 chr10 5066900 5067427 -135249338 - L1M4c LINE L1 -4042 2342 1713 570 325 96 17 chr10 5067799 5068091 -135248674 - L2 LINE L2 -890 2424 2110 3055 174 78 41 chr10 5069206 5069889 -135246876 + pTR5 LTR ERV1 741 1448 -990 8216 184 102 69 chr10 5070026 5071228 -135245537 - MER51B-int LTR ERV1 0 7816 6655 234 0 0 0 chr10 5071228 5071254 -135245511 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8216 184 102 69 chr10 5071254 5072705 -135244060 - MER51B-int LTR ERV1 -1161 6655 4954 856 172 93 54 chr10 5072687 5072891 -135243874 - MER51B-int LTR ERV1 -3244 1973 1762 * 877 143 27 0 chr10 5072893 5073040 -135243725 + GSAT Satellite centromeric 40 190 -27 1498 129 19 23 chr10 5073043 5073307 -135243458 - MER51B-int LTR ERV1 -2852 3094 2832 * 2049 134 64 0 chr10 5073303 5073631 -135243134 - MER51B-int LTR ERV1 -4504 3312 2964 879 108 7 7 chr10 5073639 5073787 -135242978 - MER51B-int LTR ERV1 -5676 2140 1993 2059 151 3 0 chr10 5073787 5074086 -135242679 + AluSq SINE Alu 1 300 -13 1976 166 92 26 chr10 5074092 5074471 -135242294 - MER51B-int LTR ERV1 -7412 404 1 2693 130 19 0 chr10 5074471 5074841 -135241924 - MER51B LTR ERV1 0 377 1 1103 256 19 4 chr10 5074841 5075107 -135241658 + MLT1A1 LTR MaLR 96 365 0 679 335 0 0 chr10 5075304 5075501 -135241264 - MSTD LTR MaLR 0 396 200 2299 221 32 15 chr10 5075699 5076232 -135240533 + MER67A LTR ERV1 1 542 -1 1768 215 80 67 chr10 5076566 5077152 -135239613 + MER67C LTR ERV1 28 621 -89 1531 143 0 0 chr10 5077282 5077505 -135239260 - AluSg SINE Alu -87 223 1 332 180 60 20 chr10 5077506 5077606 -135239159 + MER67C LTR ERV1 607 710 0 425 224 26 26 chr10 5077989 5078105 -135238660 + MER31B LTR ERV1 245 360 -106 613 121 10 20 chr10 5078132 5078231 -135238534 + MER4A LTR ERV1 1 98 -566 1830 151 3 22 chr10 5078231 5078583 -135238182 + MER4A LTR ERV1 261 664 0 1398 184 23 0 chr10 5078583 5078842 -135237923 + LTR49 LTR ERV1 23 287 -308 912 194 155 52 chr10 5078843 5079153 -135237612 + MER4A LTR ERV1 1 342 -322 518 139 285 7 chr10 5079209 5079346 -135237419 + MER4C LTR ERV1 291 465 0 547 152 132 111 chr10 5079346 5079605 -135237160 + LTR49 LTR ERV1 285 594 -1 2280 105 3 0 chr10 5079836 5080130 -135236635 + AluSp SINE Alu 1 295 -18 874 186 34 0 chr10 5080451 5080628 -135236137 + MSTD LTR MaLR 1 183 -213 201 39 0 0 chr10 5080640 5080666 -135236099 + (TC)n Simple_repeat Simple_repeat 1 26 0 509 169 11 0 chr10 5080668 5080757 -135236008 + MSTD LTR MaLR 339 428 0 2983 133 11 77 chr10 5081954 5082385 -135234380 - MER75 DNA T2_type -1 513 124 1807 131 0 69 chr10 5082385 5082691 -135234074 + AluSx SINE Alu 1 285 -27 2983 133 11 77 chr10 5082691 5082808 -135233957 - MER75 DNA T2_type -390 124 1 802 202 71 158 chr10 5083540 5084185 -135232580 + LTR49 LTR ERV1 7 595 0 1834 166 0 11 chr10 5084779 5085091 -135231674 + AluSx SINE Alu 1 309 0 1033 292 58 18 chr10 5085228 5085622 -135231143 - LTR26 LTR ERV1 -3 600 191 3481 240 11 33 chr10 5086577 5087512 -135229253 - L1 LINE L1 -1847 4299 3386 5405 37 0 6 chr10 5087512 5088136 -135228629 - L1PA4 LINE L1 -1 6154 5535 4032 139 5 5 chr10 5088237 5088863 -135227902 + MER50-int LTR ERV1 5402 6027 -1178 1844 162 10 0 chr10 5088862 5089159 -135227606 + MER50-int LTR ERV1 6882 7181 -24 * 1076 160 52 16 chr10 5089160 5089354 -135227411 + MER50 LTR ERV1 1 201 -533 552 103 103 0 chr10 5089391 5089488 -135227277 - L1PA15 LINE L1 -6 6159 6053 2218 212 35 8 chr10 5089496 5089981 -135226784 - L1P LINE L1 -1239 4907 4410 336 270 0 0 chr10 5090013 5090161 -135226604 + (CA)n Simple_repeat Simple_repeat 1 148 0 298 157 20 0 chr10 5091130 5091181 -135225584 + LTR29 LTR ERV1 571 622 0 189 74 0 0 chr10 5091581 5091608 -135225157 + (TAA)n Simple_repeat Simple_repeat 1 27 0 682 258 19 24 chr10 5092918 5093152 -135223613 + MLT1E LTR MaLR 252 495 -98 1008 106 0 35 chr10 5093351 5093492 -135223273 + AluSq/x SINE Alu 2 137 -176 1081 281 81 17 chr10 5093965 5094432 -135222333 + LTR26 LTR ERV1 104 600 -3 744 199 89 171 chr10 5094935 5095583 -135221182 - LTR49 LTR ERV1 0 595 1 1168 228 35 27 chr10 5097348 5097607 -135219158 + AluJo SINE Alu 3 263 -49 1954 184 11 3 chr10 5097613 5097961 -135218804 - LTR49 LTR ERV1 -242 353 3 420 214 19 10 chr10 5097964 5098067 -135218698 - MER31B LTR ERV1 -106 360 257 2104 152 129 28 chr10 5098103 5098491 -135218274 + MSTA LTR MaLR 2 428 0 7328 246 43 18 chr10 5098493 5100031 -135216734 + MSTA-int LTR MaLR 3 1579 -1 2106 127 132 43 chr10 5100032 5100425 -135216340 + MSTA LTR MaLR 1 428 0 434 230 34 40 chr10 5100811 5100959 -135215806 - MER67C LTR ERV1 -3 707 561 3897 286 15 1 chr10 5100962 5101880 -135214885 + PABL_B-int LTR ERV1 3754 4684 -2438 343 153 17 0 chr10 5101885 5101944 -135214821 + MER4A LTR ERV1 605 664 0 2111 212 28 37 chr10 5101944 5102487 -135214278 + L1MB3 LINE L1 5646 6183 0 395 203 70 44 chr10 5102763 5102921 -135213844 - LTR49-int LTR ERV1 -5211 1120 959 779 326 25 0 chr10 5103098 5103340 -135213425 - L1PA15-16 LINE L1 -5339 1510 1263 324 317 10 0 chr10 5103696 5103797 -135212968 - L1M2 LINE L1 -5793 1056 955 1072 286 106 24 chr10 5103857 5104318 -135212447 - L2 LINE L2 -1227 2087 1589 668 223 0 0 chr10 5104320 5104459 -135212306 - MLT1D LTR MaLR -3 502 364 247 296 0 0 chr10 5104455 5104509 -135212256 + Tigger3(Golem) DNA MER2_type 2975 3028 -1 * 2512 270 51 26 chr10 5104512 5105935 -135210830 - L1M4c LINE L1 -4026 2358 806 542 237 0 23 chr10 5106466 5106597 -135210168 - U8 snRNA snRNA -4 132 5 387 277 84 47 chr10 5108965 5109247 -135207518 + MER68 LTR ERV1 238 599 -6 228 312 136 0 chr10 5111995 5112149 -135204616 - L2 LINE L2 -1357 1957 1783 2336 86 0 13 chr10 5113067 5113369 -135203396 + AluSp SINE Alu 1 298 -15 994 241 108 49 chr10 5113411 5113939 -135202826 - LTR49-int LTR ERV1 -2464 2472 1914 883 144 7 7 chr10 5114431 5114584 -135202181 - L1PA13 LINE L1 -7 6156 6004 711 302 60 0 chr10 5114585 5114850 -135201915 - L2 LINE L2 -1436 1878 1598 1500 253 26 17 chr10 5114857 5115323 -135201442 - MLT1D LTR MaLR 0 505 36 196 290 16 16 chr10 5116123 5116185 -135200580 - MER5B DNA MER1_type -68 110 49 666 203 120 0 chr10 5116194 5116352 -135200413 - L1PB4 LINE L1 0 6156 5980 386 165 13 25 chr10 5116350 5116429 -135200336 - L1PA15-16 LINE L1 -5570 1279 1202 * 524 258 19 80 chr10 5116443 5116804 -135199961 - L1 LINE L1 -826 5320 4982 3648 181 74 15 chr10 5117298 5118078 -135198687 - LTR1B LTR ERV1 0 826 1 223 208 0 38 chr10 5118982 5119035 -135197730 + CT-rich Low_complexity Low_complexity 2 52 0 2671 264 10 8 chr10 5119280 5120002 -135196763 + MST-int LTR MaLR 910 1632 -19 535 264 39 10 chr10 5120079 5120287 -135196478 - L1M4c LINE L1 -4143 2241 2028 2200 247 40 49 chr10 5120378 5120565 -135196200 - L1M4c LINE L1 -4564 1820 1633 2003 122 21 0 chr10 5120565 5120851 -135195914 + AluSc SINE Alu 1 292 -17 2200 247 40 49 chr10 5120851 5121016 -135195749 - L1M4c LINE L1 -4751 1633 1468 1675 147 30 4 chr10 5121016 5121281 -135195484 - AluSx SINE Alu -5 307 36 2200 247 40 49 chr10 5121281 5121943 -135194822 - L1M4c LINE L1 -4916 1468 813 2025 123 3 10 chr10 5121943 5122236 -135194529 - AluSc SINE Alu -18 291 1 2200 247 40 49 chr10 5122236 5122273 -135194492 - L1M4c LINE L1 -5571 813 777 225 265 68 34 chr10 5122353 5122470 -135194295 - L1M4c LINE L1 -5714 670 550 416 258 38 30 chr10 5122796 5122928 -135193837 - U8 snRNA snRNA -3 133 1 23 33 0 0 chr10 5123285 5123315 -135193450 + AT_rich Low_complexity Low_complexity 1 30 0 966 303 94 16 chr10 5125207 5125719 -135191046 + MER68 LTR ERV1 1 552 -10 204 290 153 17 chr10 5128464 5128640 -135188125 - L2 LINE L2 -1317 1997 1798 236 261 11 0 chr10 5130021 5130113 -135186652 + (CA)n Simple_repeat Simple_repeat 1 93 0 379 319 127 0 chr10 5130392 5130549 -135186216 + MIR3 SINE MIR 26 202 -6 601 263 110 32 chr10 5131335 5131773 -135184992 - L2 LINE L2 -853 2461 1990 321 264 58 50 chr10 5131783 5131904 -135184861 - L1MC5 LINE L1 -518 7443 7322 601 261 39 32 chr10 5131934 5132214 -135184551 - L1MC4 LINE L1 -999 7043 6762 846 268 68 11 chr10 5132834 5133215 -135183550 - L1ME2 LINE L1 -66 6098 5696 246 321 27 54 chr10 5133663 5133775 -135182990 + MIR SINE MIR 20 128 -80 251 232 71 19 chr10 5134201 5134356 -135182409 - Charlie2 DNA MER1_type -4 2858 2696 297 127 38 13 chr10 5134548 5134627 -135182138 + (TAGA)n Simple_repeat Simple_repeat 1 81 0 330 316 83 18 chr10 5134791 5135069 -135181696 - MER92B LTR ERV1 -91 545 250 414 240 91 39 chr10 5135746 5136000 -135180765 - ORSL DNA AcHobo 0 275 9 1951 117 163 14 chr10 5137306 5137675 -135179090 + MSTA LTR MaLR 1 424 -4 334 274 63 84 chr10 5137905 5138095 -135178670 - L2 LINE L2 0 3313 3128 420 320 31 16 chr10 5138095 5138289 -135178476 + LTR40a LTR ERVL 1 197 -322 453 204 19 0 chr10 5138308 5138408 -135178357 - LTR49 LTR ERV1 -2 593 492 838 120 84 0 chr10 5138408 5138550 -135178215 + MER39B LTR ERV1 1 154 -499 941 184 22 0 chr10 5138564 5138749 -135178016 - LTR49-int LTR ERV1 -327 6004 5816 288 239 114 0 chr10 5138761 5138849 -135177916 - LTR49-int LTR ERV1 -189 6142 6045 2339 151 73 14 chr10 5138859 5139296 -135177469 + HUERS-P1 LTR ERV1 5794 6256 -7 2344 114 0 0 chr10 5139296 5139595 -135177170 + AluSx SINE Alu 1 299 -13 3920 138 15 58 chr10 5139610 5140332 -135176433 + LTR8 LTR ERV1 1 691 0 6670 186 53 22 chr10 5140332 5142076 -135174689 + HUERS-P1 LTR ERV1 3959 5756 -575 207 136 0 45 chr10 5142192 5142236 -135174529 + (TTTC)n Simple_repeat Simple_repeat 1 42 0 641 208 26 53 chr10 5142316 5142788 -135173977 + MER4C LTR ERV1 4 465 0 239 247 21 32 chr10 5142850 5142943 -135173822 + CT-rich Low_complexity Low_complexity 5 96 0 2089 253 20 42 chr10 5143185 5143782 -135172983 + MSTB1-int LTR MaLR 976 1559 -92 1785 208 45 14 chr10 5143795 5144214 -135172551 + MSTB1 LTR MaLR 1 432 0 624 250 0 0 chr10 5144324 5144484 -135172281 + L1P LINE L1 5059 5218 -928 277 356 40 7 chr10 5144494 5144643 -135172122 - ERVL LTR ERVL -5375 279 126 * 339 301 68 0 chr10 5144634 5144780 -135171985 - ERVL LTR ERVL -5306 458 303 27344 26 1 0 chr10 5144792 5148980 -135167785 - L1PA3 LINE L1 0 6155 1967 1141 289 61 7 chr10 5149579 5150004 -135166761 + MER68 LTR ERV1 1 448 -114 1352 179 21 69 chr10 5150031 5150322 -135166443 + AluJb SINE Alu 9 285 -27 240 303 0 0 chr10 5150336 5150402 -135166363 + MER68 LTR ERV1 491 556 -6 3873 124 56 73 chr10 5150625 5151423 -135165342 + LTR1 LTR ERV1 1 785 0 1742 179 22 11 chr10 5151908 5152272 -135164493 - L1PB2 LINE L1 -2 6865 6498 5655 182 79 10 chr10 5152375 5154287 -135162478 - L1PB2 LINE L1 -414 6453 4404 405 0 0 0 chr10 5154287 5154332 -135162433 + (TG)n Simple_repeat Simple_repeat 2 46 0 802 194 16 0 chr10 5154635 5154698 -135162067 - L1PB2 LINE L1 -2399 4463 4402 360 0 0 0 chr10 5154698 5154738 -135162027 + (TG)n Simple_repeat Simple_repeat 2 41 0 802 194 16 0 chr10 5154738 5154860 -135161905 - L1PB2 LINE L1 -2460 4402 4275 1705 262 26 37 chr10 5154871 5155523 -135161242 - L1PB2 LINE L1 -6216 647 3 261 304 22 29 chr10 5157665 5157803 -135158962 - L2 LINE L2 -1388 1926 1790 353 171 0 26 chr10 5160409 5160485 -135156280 - L1MC5 LINE L1 -285 7676 7603 386 242 114 72 chr10 5160789 5161053 -135155712 - L1MC4 LINE L1 -558 7484 7210 23 0 0 0 chr10 5161151 5161174 -135155591 + AT_rich Low_complexity Low_complexity 1 23 0 1985 130 103 30 chr10 5161280 5161619 -135155146 - THE1B LTR MaLR 0 364 1 5639 96 20 50 chr10 5161621 5162362 -135154403 - THE1B-int LTR MaLR -2 1578 864 2357 86 0 20 chr10 5162362 5162665 -135154100 - AluSg SINE Alu -13 297 1 5639 96 20 50 chr10 5162665 5162769 -135153996 - THE1B-int LTR MaLR -716 864 758 344 230 80 102 chr10 5162991 5163352 -135153413 - L1MC4 LINE L1 0 8042 7690 21 36 0 0 chr10 5163536 5163564 -135153201 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 5163825 5163851 -135152914 + AT_rich Low_complexity Low_complexity 1 26 0 262 361 0 0 chr10 5163883 5164002 -135152763 - L1MC4 LINE L1 -1036 7006 6888 269 194 45 0 chr10 5164541 5164608 -135152157 - MER5A DNA MER1_type -113 76 7 278 176 0 0 chr10 5165160 5165211 -135151554 - AluSq SINE Alu -2 306 256 1306 133 15 5 chr10 5165212 5165407 -135151358 - AluSq SINE Alu -116 197 1 982 282 111 24 chr10 5165629 5166080 -135150685 - MLT1H LTR MaLR -17 532 43 204 177 38 25 chr10 5166142 5166221 -135150544 + (TA)n Simple_repeat Simple_repeat 2 81 0 241 264 109 29 chr10 5166849 5167023 -135149742 - L1M4 LINE L1 -1544 4602 4415 247 308 75 0 chr10 5167208 5167328 -135149437 - L1MC4 LINE L1 -985 7057 6929 2258 105 0 10 chr10 5168688 5168984 -135147781 + AluSx SINE Alu 1 293 -19 3795 123 53 10 chr10 5169396 5169998 -135146767 - THE1B-int LTR MaLR -938 642 15 2187 128 51 26 chr10 5170000 5170351 -135146414 - THE1B LTR MaLR -2 362 3 409 299 72 14 chr10 5170407 5170628 -135146137 - L1MC4 LINE L1 -977 7065 6832 358 234 84 0 chr10 5171057 5171164 -135145601 - MER5A DNA MER1_type -73 116 1 186 229 12 108 chr10 5171647 5171730 -135145035 + MIR3 SINE MIR 95 169 -39 284 263 103 39 chr10 5171907 5172063 -135144702 - MLT1H LTR MaLR -27 522 357 315 256 39 45 chr10 5172078 5172234 -135144531 - L1M4 LINE L1 -877 5269 5115 2127 225 20 4 chr10 5172789 5173247 -135143518 - MSTB-int LTR MaLR -1186 465 1 1794 227 65 8 chr10 5173249 5173650 -135143115 - MSTB LTR MaLR -2 424 1 1916 158 0 3 chr10 5174764 5175061 -135141704 + AluSx SINE Alu 1 296 -16 643 338 61 7 chr10 5177443 5177739 -135139026 + L2 LINE L2 2113 2424 -890 25 51 0 0 chr10 5177876 5177915 -135138850 + AT_rich Low_complexity Low_complexity 1 39 0 2339 91 0 0 chr10 5177990 5178288 -135138477 + AluY SINE Alu 1 298 -13 2020 145 0 20 chr10 5178409 5178712 -135138053 + AluSx SINE Alu 10 306 -6 765 242 36 12 chr10 5179028 5179276 -135137489 + L1M4c LINE L1 2125 2378 -4006 465 275 51 29 chr10 5179276 5179414 -135137351 - MER7A DNA MER2_type 0 336 196 2084 113 28 0 chr10 5179421 5179705 -135137060 + AluSx SINE Alu 1 292 -20 861 81 0 65 chr10 5179727 5179851 -135136914 - AluSc SINE Alu -140 169 54 44945 40 1 4 chr10 5179966 5186138 -135130627 + L1PA3 LINE L1 2 6153 -2 956 225 16 0 chr10 5186166 5186357 -135130408 - MER7A DNA MER2_type -143 203 12 521 253 70 19 chr10 5186760 5186918 -135129847 - Tigger1 DNA MER2_type -1 2417 2252 8968 174 48 23 chr10 5187051 5188310 -135128455 - Tigger1 DNA MER2_type -573 1845 525 2262 92 7 0 chr10 5188310 5188592 -135128173 + AluSg SINE Alu 2 285 -25 8968 174 48 23 chr10 5188592 5189130 -135127635 - Tigger1 DNA MER2_type -1893 525 2 2064 233 27 33 chr10 5189168 5189679 -135127086 + MLT2B3 LTR ERVL 1 508 -46 231 125 0 0 chr10 5189679 5189719 -135127046 + (CA)n Simple_repeat Simple_repeat 1 40 0 1080 209 50 56 chr10 5189754 5190112 -135126653 + HERVL-B3 LTR ERVL 1 356 -5298 256 200 0 0 chr10 5190150 5190200 -135126565 + HERVL-B3 LTR ERVL 394 443 -5042 423 218 29 35 chr10 5190214 5190384 -135126381 + L1ME1 LINE L1 5106 5274 -872 29379 116 32 63 chr10 5191554 5195020 -135121745 + L1PA7 LINE L1 12 3167 -2987 210 37 0 0 chr10 5195020 5195047 -135121718 + (CA)n Simple_repeat Simple_repeat 2 28 0 29379 116 32 63 chr10 5195047 5197928 -135118837 + L1PA7 LINE L1 3167 6138 -16 7757 121 50 1 chr10 5197928 5199090 -135117675 + HSMAR1 DNA Mariner 13 1231 -56 217 351 40 35 chr10 5199154 5199356 -135117409 - L2 LINE L2 -140 3173 2971 665 238 37 56 chr10 5199633 5199847 -135116918 + L1MDa LINE L1 87 296 -6244 1747 257 43 19 chr10 5199887 5200417 -135116348 + L1ME1 LINE L1 5525 6067 -99 2583 216 35 24 chr10 5200417 5201042 -135115723 - LTR48B LTR ERV1 0 644 13 372 245 21 21 chr10 5201078 5201172 -135115593 + L1ME1 LINE L1 6068 6161 -5 1935 195 46 2 chr10 5201859 5202253 -135114512 + MSTB LTR MaLR 1 411 -15 13210 51 76 4 chr10 5202402 5204121 -135112644 + L1P LINE L1 2 1844 -4302 1443 204 25 0 chr10 5204619 5204893 -135111872 + AluJb SINE Alu 1 281 -31 366 250 23 0 chr10 5205606 5205694 -135111071 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 5205697 5205731 -135111034 + (TA)n Simple_repeat Simple_repeat 1 34 0 1786 146 3 14 chr10 5205731 5206018 -135110747 - AluSx SINE Alu -19 293 10 373 287 9 0 chr10 5206631 5206739 -135110026 + (CA)n Simple_repeat Simple_repeat 1 109 0 363 304 20 54 chr10 5208024 5208172 -135108593 - MIR3 SINE MIR -31 177 35 1915 127 7 19 chr10 5208618 5208926 -135107839 - THE1B LTR MaLR 0 364 61 214 324 0 14 chr10 5408955 5409026 -134907739 - L2 LINE L2 -679 2635 2566 1187 128 3 78 chr10 5409126 5409432 -134907333 - AluSx SINE Alu -19 293 11 380 250 59 52 chr10 5411718 5411854 -134904911 - MER63 DNA MER1_type -73 763 1 208 278 19 0 chr10 5411886 5411940 -134904825 - L2 LINE L2 -244 3069 3015 242 274 21 21 chr10 5412164 5412259 -134904506 + CT-rich Low_complexity Low_complexity 5 99 0 24 0 0 0 chr10 5412434 5412458 -134904307 + GC_rich Low_complexity Low_complexity 1 24 0 969 163 102 0 chr10 5413017 5413213 -134903552 + AluJo SINE Alu 87 302 -10 388 17 0 52 chr10 5414112 5414170 -134902595 - L1PA3 LINE L1 0 6155 6101 212 186 17 0 chr10 5415038 5415097 -134901668 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 5415251 5415278 -134901487 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 5415331 5415480 -134901285 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 5415510 5415564 -134901201 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 5416863 5416983 -134899782 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 5417178 5417242 -134899523 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 5417323 5417483 -134899282 + MIR SINE MIR 97 262 0 198 0 0 0 chr10 5417653 5417675 -134899090 + (T)n Simple_repeat Simple_repeat 1 22 0 31 0 0 0 chr10 5420540 5420571 -134896194 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 5420969 5420990 -134895775 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1933 118 3 10 chr10 5422022 5422327 -134894438 - AluSc SINE Alu -1 308 6 1298 290 94 51 chr10 5422671 5424224 -134892541 - L1MEd LINE L1 -4641 1669 3 2680 226 79 50 chr10 5424414 5425134 -134891631 + L1M4b LINE L1 28 768 -6091 468 0 0 0 chr10 5426967 5427019 -134889746 + (CA)n Simple_repeat Simple_repeat 2 53 0 552 200 18 0 chr10 5427689 5427859 -134888906 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 676 173 37 10 chr10 5427904 5428294 -134888471 + (TCCA)n Simple_repeat Simple_repeat 1 400 0 315 185 65 19 chr10 5428299 5428407 -134888358 + (CCCA)n Simple_repeat Simple_repeat 1 113 0 259 274 14 0 chr10 5428878 5428951 -134887814 + (CCCA)n Simple_repeat Simple_repeat 1 74 0 2031 121 7 0 chr10 5429933 5430230 -134886535 - AluSx SINE Alu -13 299 1 572 252 28 110 chr10 5433825 5434043 -134882722 - MIR SINE MIR -17 245 46 243 0 0 0 chr10 5434347 5434374 -134882391 + (A)n Simple_repeat Simple_repeat 1 27 0 2973 199 48 76 chr10 5434663 5435585 -134881180 + L1M4b LINE L1 743 1638 -5221 1756 238 70 9 chr10 5435947 5436507 -134880258 + L1M4b LINE L1 1616 2209 -4750 385 125 87 96 chr10 5436918 5437022 -134879743 - AluJ/FLAM SINE Alu -243 59 2 311 184 31 20 chr10 5439580 5439678 -134877087 + (TCCA)n Simple_repeat Simple_repeat 3 101 0 281 294 0 43 chr10 5439678 5439770 -134876995 - L2 LINE L2 0 3272 3185 811 177 0 0 chr10 5440067 5440197 -134876568 + FLAM_A SINE Alu 1 130 -3 561 306 44 20 chr10 5440304 5440547 -134876218 + MIR SINE MIR 3 248 -14 205 293 65 41 chr10 5440619 5440742 -134876023 - MIR SINE MIR -33 229 104 243 151 19 38 chr10 5440957 5441010 -134875755 + GA-rich Low_complexity Low_complexity 4 55 0 1518 147 66 7 chr10 5441385 5441657 -134875108 - AluJb SINE Alu -24 288 1 233 280 20 0 chr10 5442255 5442305 -134874460 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 5442312 5442380 -134874385 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 5442537 5442594 -134874171 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 5442595 5442775 -134873990 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 5442784 5442832 -134873933 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 5442885 5442922 -134873843 - MLT1A1 LTR MaLR 0 365 329 969 150 6 50 chr10 5442922 5443102 -134873663 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 5443102 5443439 -134873326 - MLT1A1 LTR MaLR -32 333 1 376 292 116 13 chr10 5443655 5443826 -134872939 - MIR SINE MIR -43 165 2 194 291 50 92 chr10 5444123 5444264 -134872501 - MIR3 SINE MIR -71 137 3 2185 117 0 9 chr10 5444291 5444607 -134872158 - AluSq SINE Alu 0 313 1 411 213 11 21 chr10 5444818 5444912 -134871853 - MER5B DNA MER1_type -85 93 1 230 211 0 58 chr10 5444912 5444947 -134871818 - MIR3 SINE MIR -51 157 126 409 285 18 34 chr10 5446231 5446414 -134870351 - MIR SINE MIR -79 129 8 22 0 0 0 chr10 5447159 5447181 -134869584 + AT_rich Low_complexity Low_complexity 1 22 0 727 286 64 58 chr10 5448595 5449086 -134867679 + L1MC5 LINE L1 6414 6884 -924 189 94 0 0 chr10 5449175 5449207 -134867558 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1589 173 22 0 chr10 5449208 5449485 -134867280 - AluJo SINE Alu -21 291 9 8435 236 32 18 chr10 5449494 5449778 -134866987 - L1MCa LINE L1 -1509 4917 4638 1746 104 8 4 chr10 5449778 5450027 -134866738 - AluSg SINE Alu -14 296 47 8435 236 32 18 chr10 5450027 5452100 -134864665 - L1MCa LINE L1 -1788 4638 2517 3219 144 19 0 chr10 5452100 5452615 -134864150 + L1PA16 LINE L1 5642 6166 0 8435 236 32 18 chr10 5452615 5452859 -134863906 - L1MCa LINE L1 -3909 2517 2278 2347 163 29 51 chr10 5452863 5453118 -134863647 - L1MCa LINE L1 -4234 2192 1933 2075 110 7 3 chr10 5453118 5453409 -134863356 + AluSq SINE Alu 1 292 -21 2347 163 29 51 chr10 5453409 5453428 -134863337 - L1MCa LINE L1 -4493 1933 1915 2067 117 0 13 chr10 5453428 5453727 -134863038 + AluSq SINE Alu 1 295 -18 2347 163 29 51 chr10 5453727 5453942 -134862823 - L1MCa LINE L1 -4511 1915 1713 488 172 20 0 chr10 5453936 5454035 -134862730 - L1MCa LINE L1 -5381 1045 945 * 1722 115 33 62 chr10 5454036 5454340 -134862425 - AluSq SINE Alu -13 300 6 1300 142 0 13 chr10 5454487 5454719 -134862046 + AluSq SINE Alu 85 313 0 4022 143 9 6 chr10 5455731 5456382 -134860383 + MER39B LTR ERV1 1 653 0 2139 77 46 82 chr10 5456675 5456903 -134859862 + L1MA2 LINE L1 5927 6137 -167 2002 131 3 0 chr10 5456903 5457194 -134859571 + AluSx SINE Alu 1 292 -20 2139 77 46 82 chr10 5457194 5457357 -134859408 + L1MA2 LINE L1 6137 6304 0 2217 128 32 11 chr10 5457449 5457825 -134858940 - MLT1B LTR MaLR -4 386 3 1797 134 44 103 chr10 5457868 5458076 -134858689 - THE1B LTR MaLR 0 364 188 2187 119 0 0 chr10 5458076 5458388 -134858377 + AluSq SINE Alu 1 312 -1 1797 134 44 103 chr10 5458388 5458566 -134858199 - THE1B LTR MaLR -176 188 1 222 322 76 66 chr10 5458666 5458955 -134857810 - L2 LINE L2 -561 2753 2462 296 354 39 8 chr10 5459191 5459318 -134857447 + MIR SINE MIR 99 229 -33 227 243 13 13 chr10 5461370 5461462 -134855303 - MIR SINE MIR -61 147 93 1595 199 112 23 chr10 5461987 5462063 -134854702 + MLT1D LTR MaLR 29 97 -408 2253 114 75 41 chr10 5462063 5462475 -134854290 + MSTC LTR MaLR 1 426 -2 1595 199 112 23 chr10 5462475 5462834 -134853931 + MLT1D LTR MaLR 97 503 -2 378 210 25 0 chr10 5462967 5463048 -134853717 - MIR SINE MIR -151 111 29 180 376 30 20 chr10 5463168 5463269 -134853496 + MIR SINE MIR 59 160 -102 445 311 202 8 chr10 5463540 5463897 -134852868 + L3 LINE CR1 1122 1547 -30 312 282 36 0 chr10 5464442 5464552 -134852213 + MER5A DNA MER1_type 74 187 -2 419 177 0 0 chr10 5465854 5465933 -134850832 + LTR41 LTR ERVL 57 135 -638 2384 113 0 3 chr10 5466444 5466753 -134850012 + AluSx SINE Alu 1 308 -4 1964 152 11 55 chr10 5467660 5467828 -134848937 + MLT1A1 LTR MaLR 1 175 -190 2427 97 0 3 chr10 5467828 5468138 -134848627 + AluSx SINE Alu 1 309 -3 1964 152 11 55 chr10 5468138 5468351 -134848414 + MLT1A1 LTR MaLR 175 365 0 337 265 32 91 chr10 5468361 5468580 -134848185 - MLT1L LTR MaLR -194 391 112 2194 105 9 6 chr10 5468712 5469043 -134847722 + THE1B LTR MaLR 1 427 -30 691 175 0 113 chr10 5469053 5469213 -134847552 + Tigger1 DNA MER2_type 1 142 -2276 1085 184 14 0 chr10 5469234 5469441 -134847324 + Tigger1 DNA MER2_type 2209 2418 0 423 0 0 0 chr10 5471159 5471206 -134845559 + (TG)n Simple_repeat Simple_repeat 2 48 0 227 244 167 58 chr10 5471385 5471541 -134845224 + MER115 DNA AcHobo 140 312 -381 187 335 238 19 chr10 5472011 5473049 -134843716 - L2 LINE L2 -442 2872 1608 299 327 121 18 chr10 5473270 5473435 -134843330 - MIR3 SINE MIR -23 185 4 222 355 59 67 chr10 5474242 5474633 -134842132 - L2 LINE L2 -32 3240 2853 2413 85 0 19 chr10 5474636 5474953 -134841812 - AluY SINE Alu 0 311 1 929 209 29 9 chr10 5478122 5478332 -134838433 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 5478405 5478527 -134838238 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 5478686 5479101 -134837664 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 5479492 5479665 -134837100 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 5479816 5479872 -134836893 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 5480000 5480301 -134836464 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 5480363 5480621 -134836144 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 5481268 5481581 -134835184 - AluSq SINE Alu 0 313 1 1662 178 3 39 chr10 5481583 5481892 -134834873 - AluJb SINE Alu -9 303 6 2265 131 0 0 chr10 5482062 5482374 -134834391 - AluSx SINE Alu 0 312 1 636 293 120 10 chr10 5482429 5482613 -134834152 + L2 LINE L2 2044 2206 -1108 1745 189 7 0 chr10 5482613 5482909 -134833856 - AluJo SINE Alu -14 298 1 636 293 120 10 chr10 5482909 5483024 -134833741 + L2 LINE L2 2206 2376 -938 1019 128 7 0 chr10 5483037 5483178 -134833587 + AluSq/x SINE Alu 1 142 -170 1614 135 8 4 chr10 5483312 5483557 -134833208 + AluSg/x SINE Alu 66 311 -1 2059 152 3 18 chr10 5483726 5484068 -134832697 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr10 5484344 5484365 -134832400 + AT_rich Low_complexity Low_complexity 1 21 0 685 328 109 40 chr10 5484662 5485058 -134831707 + L3 LINE CR1 73 495 -1082 300 247 43 54 chr10 5485131 5485224 -134831541 - L2 LINE L2 -2 3311 3220 334 267 81 34 chr10 5485251 5485454 -134831311 + MIR SINE MIR 18 236 -26 798 325 153 13 chr10 5485565 5486088 -134830677 + L3 LINE CR1 768 1363 -214 188 61 61 0 chr10 5489563 5489596 -134827169 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 216 97 0 0 chr10 5490416 5490447 -134826318 + (GA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr10 5490882 5490913 -134825852 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 5491278 5491299 -134825466 + AT_rich Low_complexity Low_complexity 1 21 0 203 243 225 45 chr10 5493220 5493331 -134823434 + MIR3 SINE MIR 68 198 -10 229 155 31 103 chr10 5494796 5494893 -134821872 + L2 LINE L2 1636 1725 -1589 1968 145 0 38 chr10 5494906 5495223 -134821542 - AluSx SINE Alu -7 305 1 189 301 108 60 chr10 5496052 5496218 -134820547 + L2 LINE L2 2968 3141 -131 475 261 34 8 chr10 5497577 5497696 -134819069 + L2 LINE L2 3191 3312 -1 2073 125 3 0 chr10 5497988 5498285 -134818480 - AluSg SINE Alu -12 298 1 745 149 51 93 chr10 5499866 5499941 -134816824 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 5499941 5500206 -134816559 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 5500206 5500344 -134816421 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 5500378 5500543 -134816222 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 5500838 5500885 -134815880 - L1MB3 LINE L1 -28 6155 6109 2369 125 37 6 chr10 5500885 5501238 -134815527 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 5501238 5501583 -134815182 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 5501589 5501660 -134815105 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 5502184 5502481 -134814284 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 5502538 5502717 -134814048 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 5503576 5503619 -134813146 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 5503700 5503724 -134813041 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 5504391 5505010 -134811755 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 5505010 5505325 -134811440 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 5505325 5505622 -134811143 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 5505624 5505692 -134811073 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 5505702 5505883 -134810882 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 5506294 5506411 -134810354 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 5506610 5506760 -134810005 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 5506770 5506920 -134809845 - MIR SINE MIR -63 199 43 560 256 122 99 chr10 5507438 5507643 -134809122 + MLT1J LTR MaLR 6 205 -306 2475 86 3 0 chr10 5507643 5507944 -134808821 - AluSg SINE Alu -8 302 1 560 256 122 99 chr10 5507944 5508231 -134808534 + MLT1J LTR MaLR 205 509 -2 430 278 28 45 chr10 5508275 5508451 -134808314 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 5508884 5509055 -134807710 + MIR SINE MIR 44 240 -22 3339 171 20 12 chr10 5509060 5509376 -134807389 + L1MCa LINE L1 202 514 -5912 1662 151 80 37 chr10 5509376 5509423 -134807342 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 5509423 5509737 -134807028 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 5509737 5510040 -134806725 + MER47A DNA MER2_type 45 366 0 3339 171 20 12 chr10 5510040 5510372 -134806393 + L1MCa LINE L1 514 855 -5571 474 268 140 0 chr10 5510554 5510718 -134806047 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 5510820 5510929 -134805836 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 5511026 5511338 -134805427 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 5511857 5511985 -134804780 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 5512152 5512220 -134804545 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 5512492 5512603 -134804162 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 5513459 5513537 -134803228 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 5513559 5513796 -134802969 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 5513796 5514061 -134802704 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 5514061 5514600 -134802165 + MER21B LTR ERV1 255 794 -69 250 337 125 16 chr10 5514767 5514951 -134801814 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 5515010 5515150 -134801615 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 5515150 5515450 -134801315 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 5516802 5517021 -134799744 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 5517049 5517388 -134799377 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 5518136 5518497 -134798268 - THE1B LTR MaLR 0 364 1 216 235 0 0 chr10 5520855 5520923 -134795842 + CT-rich Low_complexity Low_complexity 1 68 0 352 336 22 0 chr10 5521743 5521877 -134794888 - MIR3 SINE MIR -52 156 20 346 179 64 0 chr10 5522148 5522226 -134794539 - Charlie5 DNA MER1_type -2503 109 27 183 100 0 0 chr10 5523313 5523343 -134793422 + (A)n Simple_repeat Simple_repeat 1 30 0 2018 104 4 0 chr10 5524691 5524960 -134791805 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 5526983 5527005 -134789760 + AT_rich Low_complexity Low_complexity 1 22 0 527 184 0 10 chr10 5528268 5528366 -134788399 + FLAM_A SINE Alu 35 131 -11 243 0 0 0 chr10 5528917 5528944 -134787821 + (T)n Simple_repeat Simple_repeat 1 27 0 1262 169 21 104 chr10 5531991 5532246 -134784519 + MER66A-int LTR ERV1 3224 3499 -3177 2486 113 19 19 chr10 5532246 5532610 -134784155 + THE1B LTR MaLR 1 364 0 1262 169 21 104 chr10 5532610 5532977 -134783788 + MER66A-int LTR ERV1 3499 4437 -2239 462 194 78 10 chr10 5532977 5533080 -134783685 + MER4D LTR ERV1 52 161 -711 957 180 71 38 chr10 5533168 5533379 -134783386 + MER66A-int LTR ERV1 4611 4828 -1848 1916 158 11 29 chr10 5533473 5533538 -134783227 + MER66A-int LTR ERV1 6334 6399 -277 2358 95 7 0 chr10 5533538 5533834 -134782931 - AluSp SINE Alu -12 301 4 1916 158 11 29 chr10 5533834 5534117 -134782648 + MER66A-int LTR ERV1 6399 6676 0 1131 201 139 37 chr10 5534155 5534544 -134782221 + MER66A LTR ERV1 97 428 -50 452 173 109 18 chr10 5534861 5534971 -134781794 + MER53 DNA DNA 1 120 -69 328 206 244 23 chr10 5534877 5535008 -134781757 - MER53 DNA DNA -7 182 23 * 312 255 60 87 chr10 5536148 5536332 -134780433 + MIR SINE MIR 68 246 -16 186 231 0 92 chr10 5537070 5537135 -134779630 - L3 LINE CR1 -710 867 809 528 204 148 28 chr10 5538636 5538778 -134777987 - MIR SINE MIR -91 171 13 205 302 94 19 chr10 5540068 5540174 -134776591 + L2 LINE L2 3200 3313 0 449 248 50 8 chr10 5540854 5540975 -134775790 - L2 LINE L2 -11 3261 3136 576 266 130 11 chr10 5541905 5542089 -134774676 - MIR SINE MIR -53 209 4 6400 24 0 0 chr10 5546075 5547052 -134769713 - L1PA3 LINE L1 -141 6014 5038 2079 154 59 77 chr10 5547227 5547501 -134769264 - MER31A LTR ERV1 0 485 222 3421 121 31 13 chr10 5547501 5548054 -134768711 - L1MA2 LINE L1 -1 6303 5741 2079 154 59 77 chr10 5548054 5548273 -134768492 - MER31A LTR ERV1 -263 222 1 331 325 36 24 chr10 5549488 5549654 -134767111 + (CATG)n Simple_repeat Simple_repeat 1 168 0 * 379 385 0 6 chr10 5549546 5549725 -134767040 + (CA)n Simple_repeat Simple_repeat 1 178 0 416 363 18 6 chr10 5550390 5550558 -134766207 - MIR SINE MIR -69 193 24 532 227 81 86 chr10 5550695 5551399 -134765366 + L1MC5 LINE L1 6780 7670 -291 2256 118 0 0 chr10 5551399 5551695 -134765070 - AluSx SINE Alu -15 297 2 532 227 81 86 chr10 5551695 5551926 -134764839 + L1MC5 LINE L1 7670 7901 -60 316 224 17 60 chr10 5552219 5552335 -134764430 + L2 LINE L2 2985 3095 -177 256 241 218 30 chr10 5553972 5554105 -134762660 - MIR3 SINE MIR -41 167 10 214 167 0 0 chr10 5555561 5555597 -134761168 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1990 126 7 10 chr10 5555800 5556124 -134760641 - AluSx SINE Alu 0 332 10 5155 102 10 0 chr10 5556124 5556836 -134759929 - LTR30 LTR ERV1 -2 720 2 204 67 0 0 chr10 5558910 5558940 -134757825 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 23 33 0 0 chr10 5564823 5564853 -134751912 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr10 5565311 5565350 -134751415 + (TTA)n Simple_repeat Simple_repeat 2 40 0 859 202 12 6 chr10 5567062 5567235 -134749530 - FAM SINE Alu -1 174 1 388 308 61 35 chr10 5573993 5574191 -134742574 - MIR3 SINE MIR -3 205 3 674 301 74 7 chr10 5574946 5575351 -134741414 - L1M4 LINE L1 -2371 3775 3344 21 36 0 0 chr10 5577839 5577867 -134738898 + AT_rich Low_complexity Low_complexity 1 28 0 412 60 15 60 chr10 5578593 5578660 -134738105 - Alu SINE Alu -17 295 232 251 218 218 11 chr10 5578765 5578852 -134737913 + L2 LINE L2 2940 3044 -269 295 263 116 11 chr10 5581296 5581391 -134735374 + MIR SINE MIR 158 262 0 4109 148 21 83 chr10 5582926 5583253 -134733512 - LTR39 LTR ERV1 -29 754 408 2092 109 0 6 chr10 5583253 5583564 -134733201 + AluSx SINE Alu 1 309 -3 4109 148 21 83 chr10 5583564 5583956 -134732809 - LTR39 LTR ERV1 -375 408 88 2016 116 7 3 chr10 5583956 5584250 -134732515 - AluSx SINE Alu -17 295 1 4109 148 21 83 chr10 5584250 5584333 -134732432 - LTR39 LTR ERV1 -695 88 1 1982 121 0 7 chr10 5585208 5585497 -134731268 + AluSx SINE Alu 1 287 -25 253 205 110 16 chr10 5586450 5586562 -134730203 - L1ME4a LINE L1 -84 6025 1141 1957 159 43 0 chr10 5586600 5586926 -134729839 + MER47A DNA MER2_type 27 366 0 295 289 112 48 chr10 5586930 5587080 -134729685 - L1ME4a LINE L1 -223 5898 5732 1914 119 3 17 chr10 5587080 5587374 -134729391 - AluSx SINE Alu -22 290 1 295 289 112 48 chr10 5587374 5587410 -134729355 - L1ME4a LINE L1 -389 5732 5700 216 111 0 0 chr10 5587489 5587525 -134729240 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 272 243 119 89 chr10 5587550 5587752 -134729013 - MLT1J LTR MaLR -103 408 201 2104 179 6 6 chr10 5588906 5589269 -134727496 - MLT1A1 LTR MaLR 0 365 3 1842 193 63 30 chr10 5589661 5590087 -134726678 - L1MD1 LINE L1 0 6242 5803 233 298 134 72 chr10 5590087 5590349 -134726416 + L2 LINE L2 2688 2965 -349 504 287 126 18 chr10 5590353 5590576 -134726189 - MIR SINE MIR 0 262 16 1524 163 62 24 chr10 5590908 5591196 -134725569 - AluJo SINE Alu -13 299 1 256 286 37 55 chr10 5591210 5591301 -134725464 - L1MD1 LINE L1 -382 5739 5648 2126 116 0 0 chr10 5591301 5591602 -134725163 - AluSx SINE Alu -11 301 1 256 286 37 55 chr10 5591602 5591746 -134725019 - L1MD1 LINE L1 -473 5648 5506 816 188 0 7 chr10 5591807 5591951 -134724814 + MLT1D LTR MaLR 363 505 0 26 0 0 0 chr10 5592212 5592238 -134724527 + AT_rich Low_complexity Low_complexity 1 26 0 198 323 62 21 chr10 5593187 5593283 -134723482 + L2 LINE L2 3199 3298 -15 1987 146 0 3 chr10 5593425 5593734 -134723031 + AluSx SINE Alu 1 308 -4 378 42 0 0 chr10 5594124 5594172 -134722593 + (CA)n Simple_repeat Simple_repeat 2 49 0 611 152 163 20 chr10 5594578 5594750 -134722015 - MER66A LTR ERV1 -261 341 97 239 250 0 0 chr10 5595091 5595143 -134721622 - MIR SINE MIR -139 123 72 1555 178 93 77 chr10 5595368 5595835 -134720930 + MER66A LTR ERV1 97 478 0 7682 198 71 44 chr10 5596011 5596518 -134720247 + MER66A-int LTR ERV1 197 689 -5987 1530 172 59 0 chr10 5596518 5596791 -134719974 - AluSg SINE Alu -21 289 1 7682 198 71 44 chr10 5596791 5597658 -134719107 + MER66A-int LTR ERV1 689 1635 -5041 1572 171 20 7 chr10 5597658 5597951 -134718814 + AluJo SINE Alu 1 297 -15 7682 198 71 44 chr10 5597951 5598443 -134718322 + MER66A-int LTR ERV1 1635 2113 -4563 4374 211 39 19 chr10 5598553 5599442 -134717323 + MER66A-int LTR ERV1 2342 3248 -3428 318 176 0 40 chr10 5599432 5599506 -134717259 + LTR38-int LTR ERV1 1407 1477 -309 * 21 36 0 0 chr10 5599549 5599577 -134717188 + AT_rich Low_complexity Low_complexity 1 28 0 266 250 22 33 chr10 5700189 5700281 -134616484 + GA-rich Low_complexity Low_complexity 6 96 0 1597 179 31 0 chr10 5700571 5700861 -134615904 + AluJo SINE Alu 1 299 -13 758 146 0 24 chr10 5702165 5702288 -134614477 + AluJ SINE Alu 16 135 -177 1488 220 25 22 chr10 5702693 5703057 -134613708 - MLT1A1 LTR MaLR 0 365 1 315 255 36 0 chr10 5703375 5703502 -134613263 + L1ME3A LINE L1 5862 5995 -169 256 307 13 0 chr10 5703534 5703609 -134613156 + L1ME3A LINE L1 6068 6143 -27 818 176 0 0 chr10 5704125 5704261 -134612504 + AluJ SINE Alu 133 268 -44 718 80 0 18 chr10 5704306 5704419 -134612346 + (GGAA)n Simple_repeat Simple_repeat 2 112 0 1047 136 11 17 chr10 5705116 5705293 -134611472 - AluJo SINE Alu -18 294 119 253 338 69 25 chr10 5705612 5705772 -134610993 + MIR3 SINE MIR 20 186 -22 335 77 0 19 chr10 5706778 5706830 -134609935 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1699 150 11 0 chr10 5706876 5707142 -134609623 - AluJo SINE Alu -43 269 1 180 125 0 0 chr10 5708775 5708807 -134607958 - MIR SINE MIR -119 143 112 228 185 0 65 chr10 5709924 5710016 -134606749 + GA-rich Low_complexity Low_complexity 2 87 0 968 106 17 22 chr10 5710016 5710196 -134606569 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 192 302 23 35 chr10 5710770 5710856 -134605909 + L2 LINE L2 3185 3269 -3 2272 100 0 0 chr10 5710977 5711276 -134605489 - AluSc SINE Alu -10 299 1 271 304 99 31 chr10 5711965 5712126 -134604639 - L2 LINE L2 0 3272 3101 1724 145 3 63 chr10 5712128 5712460 -134604305 + AluJb SINE Alu 1 312 0 2253 98 10 0 chr10 5712654 5712959 -134603806 + AluSx SINE Alu 1 308 -4 2421 93 3 0 chr10 5714334 5714644 -134602121 - AluSx SINE Alu 0 312 2 318 50 0 0 chr10 5714644 5714684 -134602081 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 227 263 158 0 chr10 5715059 5715154 -134601611 - MIR SINE MIR -13 249 140 203 370 14 0 chr10 5715417 5715490 -134601275 + MIR SINE MIR 169 242 -20 360 242 0 0 chr10 5717192 5717287 -134599478 + (CAGG)n Simple_repeat Simple_repeat 3 97 0 339 342 57 0 chr10 5717759 5717911 -134598854 + MIR SINE MIR 6 168 -40 270 264 50 25 chr10 5718050 5718171 -134598594 - MIR SINE MIR -80 182 59 201 196 22 0 chr10 5718710 5718756 -134598009 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 2029 152 7 0 chr10 5720905 5721208 -134595557 + AluSx SINE Alu 1 305 -7 229 286 0 14 chr10 5721233 5721303 -134595462 - MIR SINE MIR -86 122 54 1206 122 0 12 chr10 5721808 5721972 -134594793 + AluJb SINE Alu 138 299 -13 1540 148 41 10 chr10 5722051 5722342 -134594423 + L1MA9 LINE L1 6012 6311 -1 23 0 0 0 chr10 5722345 5722368 -134594397 + AT_rich Low_complexity Low_complexity 1 23 0 1315 148 0 37 chr10 5722972 5723188 -134593577 + AluJb SINE Alu 86 293 -19 2293 78 0 14 chr10 5723416 5723711 -134593054 - AluSc SINE Alu -18 291 1 24 0 0 0 chr10 5723729 5723753 -134593012 + AT_rich Low_complexity Low_complexity 1 24 0 288 229 48 0 chr10 5723775 5723858 -134592907 - ORSL DNA AcHobo -157 118 32 192 347 67 0 chr10 5724170 5724245 -134592520 + MIR SINE MIR 84 163 -99 556 99 0 12 chr10 5724551 5724632 -134592133 + MADE1 DNA Mariner 1 80 0 1837 152 0 49 chr10 5724824 5725152 -134591613 + AluJo SINE Alu 1 312 0 385 313 39 34 chr10 5725827 5726006 -134590759 + MIR3 SINE MIR 23 202 -6 696 127 0 0 chr10 5727166 5727276 -134589489 + (CA)n Simple_repeat Simple_repeat 1 110 0 572 210 25 0 chr10 5728508 5728753 -134588012 + GA-rich Low_complexity Low_complexity 1 251 0 229 225 56 0 chr10 5728860 5728931 -134587834 - L1ME LINE L1 -516 5605 5531 391 175 75 0 chr10 5729476 5729556 -134587209 - MER20 DNA MER1_type -86 133 48 210 139 116 0 chr10 5729679 5729722 -134587043 - L2 LINE L2 0 3272 3225 1489 162 97 35 chr10 5731841 5732131 -134584634 - AluJo SINE Alu -4 308 1 1765 99 0 0 chr10 5732151 5732374 -134584391 - AluSx SINE Alu -89 223 1 519 160 135 58 chr10 5732390 5732546 -134584219 - MER2 DNA MER2_type -135 210 43 341 239 22 22 chr10 5733362 5733454 -134583311 - L1ME4a LINE L1 -74 6047 5956 1426 142 191 0 chr10 5733807 5734095 -134582670 + MER7A DNA MER2_type 5 345 -1 389 261 137 6 chr10 5734397 5734558 -134582207 + MIR SINE MIR 44 225 -37 1777 157 15 0 chr10 5735580 5735854 -134580911 - AluJo SINE Alu -21 291 14 1478 198 16 39 chr10 5738115 5738423 -134578342 - AluJo SINE Alu -11 301 1 2134 108 0 3 chr10 5738542 5738828 -134577937 - AluSx SINE Alu -20 292 8 2655 45 0 13 chr10 5739051 5739364 -134577401 - AluY SINE Alu -2 309 1 301 118 0 0 chr10 5739597 5739648 -134577117 + Alu SINE Alu 251 301 -1 584 201 30 0 chr10 5739656 5739790 -134576975 - L1MB5 LINE L1 -46 6128 5991 256 313 30 0 chr10 5739801 5739900 -134576865 - L2 LINE L2 -34 3238 3137 2117 88 50 0 chr10 5739959 5740242 -134576523 + AluSg SINE Alu 1 297 -13 490 309 0 8 chr10 5740282 5740408 -134576357 - MIR SINE MIR -91 171 47 1376 198 64 28 chr10 5740414 5740574 -134576191 - L1MB5 LINE L1 -193 5981 5828 2335 68 20 0 chr10 5740574 5740866 -134575899 - AluY SINE Alu -13 298 1 1376 198 64 28 chr10 5740866 5741063 -134575702 - L1MB5 LINE L1 -346 5828 5611 1032 199 38 4 chr10 5741063 5741299 -134575466 - AluJb SINE Alu -5 307 64 2082 126 0 11 chr10 5741420 5741740 -134575025 + AluSx SINE Alu 1 317 0 730 201 65 15 chr10 5741824 5742060 -134574705 + MLT1G LTR MaLR 247 590 0 22 0 0 0 chr10 5742181 5742203 -134574562 + AT_rich Low_complexity Low_complexity 1 22 0 2275 99 20 0 chr10 5742208 5742511 -134574254 + AluSq SINE Alu 1 309 -4 1694 121 16 39 chr10 5742525 5742781 -134573984 + AluSx SINE Alu 3 252 -60 286 118 0 0 chr10 5742955 5743006 -134573759 + AluSx SINE Alu 251 301 0 297 308 55 55 chr10 5743270 5743582 -134573183 - L1ME LINE L1 -5652 418 107 1708 183 7 0 chr10 5743609 5743888 -134572877 - AluJb SINE Alu -23 289 9 1145 151 5 15 chr10 5744021 5744220 -134572545 - MER50-int LTR ERV1 -6724 481 285 215 269 0 0 chr10 5744396 5744448 -134572317 + L2 LINE L2 2599 2650 -664 2453 85 3 0 chr10 5744448 5744753 -134572012 - AluSp SINE Alu -7 306 1 2103 127 6 16 chr10 5744761 5745076 -134571689 - AluSx SINE Alu 0 312 1 215 270 132 78 chr10 5745229 5745433 -134571332 + L2 LINE L2 2856 3070 -243 633 165 1 46 chr10 5745439 5745584 -134571181 + L1MA6 LINE L1 5823 5956 -210 2368 97 0 0 chr10 5745589 5745879 -134570886 + AluSg SINE Alu 18 307 -3 436 190 123 43 chr10 5746782 5747035 -134569730 + L1ME LINE L1 530 802 -5268 2167 103 13 0 chr10 5747133 5747433 -134569332 + AluSc SINE Alu 1 304 -5 250 115 97 0 chr10 5747433 5747492 -134569273 + AluSg/x SINE Alu 132 189 -111 2338 233 88 63 chr10 5747698 5748751 -134568014 + L1M4 LINE L1 4005 5030 -1116 2281 91 7 0 chr10 5748751 5749049 -134567716 + AluY SINE Alu 1 300 -11 2338 233 88 63 chr10 5749049 5749137 -134567628 + L1M4 LINE L1 5030 5114 -1032 2042 134 7 3 chr10 5749137 5749427 -134567338 + AluSx SINE Alu 1 291 -21 2338 233 88 63 chr10 5749427 5749492 -134567273 + L1M4 LINE L1 5114 5242 -904 5432 65 9 9 chr10 5750909 5750927 -134565838 + L1PA7 LINE L1 5319 5336 -818 2136 116 0 3 chr10 5750927 5751211 -134565554 + AluSx SINE Alu 2 284 -28 5432 65 9 9 chr10 5751211 5751932 -134564833 + L1PA7 LINE L1 5335 6058 -96 24 0 0 0 chr10 5752202 5752226 -134564539 + AT_rich Low_complexity Low_complexity 1 24 0 2201 121 19 10 chr10 5752295 5752602 -134564163 + AluSq SINE Alu 1 310 -3 1796 150 4 4 chr10 5753485 5753752 -134563013 + AluSx SINE Alu 1 267 -45 2258 125 0 0 chr10 5754024 5754328 -134562437 - AluSx SINE Alu -4 308 5 1378 150 13 13 chr10 5754493 5754720 -134562045 + AluJb SINE Alu 25 251 -61 180 182 0 0 chr10 5754987 5755020 -134561745 - L3 LINE CR1 -1348 229 197 1323 163 30 49 chr10 5757091 5757355 -134559410 - AluJo SINE Alu -14 298 40 207 301 68 14 chr10 5757948 5758021 -134558744 - MIR3 SINE MIR -20 188 112 351 237 11 0 chr10 5758393 5758486 -134558279 + L1M3 LINE L1 4463 4556 -1590 2113 197 115 47 chr10 5758529 5759009 -134557756 + L1M3 LINE L1 4669 5115 -1068 777 174 0 36 chr10 5759009 5759147 -134557618 + FLAM_A SINE Alu 1 133 0 2113 197 115 47 chr10 5759147 5759293 -134557472 + L1M3 LINE L1 5115 5250 -933 2168 109 14 0 chr10 5759293 5759586 -134557179 + AluSp SINE Alu 1 297 -16 2113 197 115 47 chr10 5759586 5759825 -134556940 + L1M3 LINE L1 5250 5603 -580 669 106 7 78 chr10 5759935 5760056 -134556709 - L1M LINE L1 -783 5397 5286 2008 102 42 7 chr10 5760056 5760339 -134556426 - AluSx SINE Alu -19 293 1 669 106 7 78 chr10 5760339 5760359 -134556406 - L1M LINE L1 -894 5286 5266 190 240 60 0 chr10 5760416 5760466 -134556299 + L2 LINE L2 3183 3235 -78 198 0 0 0 chr10 5760466 5760488 -134556277 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2272 95 17 3 chr10 5760506 5760802 -134555963 + AluSx SINE Alu 1 300 -12 490 208 2 97 chr10 5760836 5760933 -134555832 + L1ME2 LINE L1 6005 6084 -82 2214 107 0 0 chr10 5760933 5761214 -134555551 + AluSx SINE Alu 16 296 -16 490 208 2 97 chr10 5761214 5761289 -134555476 + L1ME2 LINE L1 6084 6165 -1 2270 104 0 31 chr10 5761320 5761637 -134555128 + AluSg1 SINE Alu 1 307 -2 673 179 179 21 chr10 5761646 5761724 -134555041 + AluJo SINE Alu 2 66 -246 186 43 0 0 chr10 5761724 5761747 -134555018 + (CAGAC)n Simple_repeat Simple_repeat 5 27 0 673 179 179 21 chr10 5761747 5761797 -134554968 + AluJo SINE Alu 66 107 -205 1649 169 3 44 chr10 5761797 5762093 -134554672 + AluJb SINE Alu 21 304 -8 673 179 179 21 chr10 5762093 5762108 -134554657 + AluJo SINE Alu 107 169 -143 410 135 189 0 chr10 5762477 5762551 -134554214 + AluSg1 SINE Alu 2 89 -220 1413 147 0 22 chr10 5762651 5762883 -134553882 - AluJb SINE Alu -85 227 1 258 155 52 0 chr10 5762884 5762942 -134553823 + L1MB5 LINE L1 6114 6174 0 298 341 82 16 chr10 5763940 5764122 -134552643 - MIR SINE MIR -16 246 53 224 120 20 40 chr10 5764155 5764205 -134552560 + A-rich Low_complexity Low_complexity 4 52 0 1862 148 173 0 chr10 5764629 5764994 -134551771 - MSTA LTR MaLR 0 428 1 1205 36 0 7 chr10 5765217 5765354 -134551411 + AluSg SINE Alu 2 137 -173 1658 50 0 15 chr10 5765360 5765559 -134551206 + AluY SINE Alu 86 323 0 379 0 0 0 chr10 5765559 5765601 -134551164 + (TAAA)n Simple_repeat Simple_repeat 2 160 0 1890 150 0 3 chr10 5765604 5765911 -134550854 + AluSx SINE Alu 1 306 -6 464 161 0 0 chr10 5765913 5765994 -134550771 + L1M LINE L1 5312 5392 -788 1908 113 3 7 chr10 5766009 5766315 -134550450 + AluSx SINE Alu 1 305 0 180 0 0 0 chr10 5766629 5766649 -134550116 + (TA)n Simple_repeat Simple_repeat 2 21 0 1610 184 0 3 chr10 5766977 5767270 -134549495 + AluJb SINE Alu 3 294 -18 1946 142 0 0 chr10 5767928 5768224 -134548541 - AluSx SINE Alu -14 298 3 2164 99 10 0 chr10 5768229 5768532 -134548233 - AluSx SINE Alu -6 306 1 874 182 18 6 chr10 5768532 5768697 -134548068 - AluJb SINE Alu -15 297 131 2254 89 10 0 chr10 5769524 5769827 -134546938 + AluSp SINE Alu 1 306 -7 1720 113 0 90 chr10 5769847 5769976 -134546789 + AluSx SINE Alu 12 151 -161 2078 105 7 3 chr10 5769976 5770270 -134546495 + AluSg SINE Alu 1 295 -15 1720 113 0 90 chr10 5770270 5770450 -134546315 + AluSx SINE Alu 151 293 -19 515 204 106 129 chr10 5771060 5771406 -134545359 + MLT1F LTR MaLR 166 555 0 206 311 0 0 chr10 5771406 5771467 -134545298 - L2 LINE L2 -819 2495 2435 1988 116 3 0 chr10 5771487 5771794 -134544971 + AluSq SINE Alu 1 308 0 1535 185 3 10 chr10 5772055 5772357 -134544408 + AluJb SINE Alu 1 300 -12 298 349 128 45 chr10 5772418 5772871 -134543894 - L2 LINE L2 -4 3268 2739 2232 90 13 0 chr10 5772871 5773171 -134543594 - AluSx SINE Alu -8 304 1 298 349 128 45 chr10 5773171 5773349 -134543416 - L2 LINE L2 -533 2739 2577 1096 123 12 0 chr10 5773499 5773669 -134543096 - AluSg/x SINE Alu -10 302 131 22 0 0 0 chr10 5773729 5773751 -134543014 + AT_rich Low_complexity Low_complexity 1 22 0 819 154 67 0 chr10 5773957 5774106 -134542659 - AluJo/FRAM SINE Alu -18 294 136 2077 107 0 3 chr10 5774108 5774398 -134542367 - AluSg1 SINE Alu -20 289 1 863 190 12 0 chr10 5774707 5774870 -134541895 + AluJb SINE Alu 135 299 -13 185 105 0 26 chr10 5776224 5776262 -134540503 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 242 206 147 15 chr10 5776953 5777021 -134539744 - MER5A DNA MER1_type -83 106 30 342 313 120 7 chr10 5777391 5777541 -134539224 - MIR SINE MIR -68 194 28 198 0 0 0 chr10 5777617 5777639 -134539126 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1998 113 0 0 chr10 5777652 5777926 -134538839 - AluSx SINE Alu -38 274 1 514 127 0 38 chr10 5778182 5778261 -134538504 - Tigger3(Golem) DNA MER2_type -729 2300 2225 2001 90 54 0 chr10 5778313 5778591 -134538174 - AluSc SINE Alu -16 293 1 1137 121 60 16 chr10 5778862 5779044 -134537721 + MER30B DNA MER1_type 1 190 0 181 397 0 15 chr10 5779081 5779149 -134537616 - MIR SINE MIR -195 67 1 638 118 20 92 chr10 5779375 5779413 -134537352 - L1MB3 LINE L1 0 6183 6144 2285 69 16 3 chr10 5779413 5779716 -134537049 - AluSq SINE Alu -6 307 1 638 118 20 92 chr10 5779716 5779829 -134536936 - L1MB3 LINE L1 -39 6144 6043 339 289 20 0 chr10 5779829 5779978 -134536787 - AluSg/x SINE Alu -11 291 140 342 279 62 93 chr10 5780214 5780472 -134536293 + L2 LINE L2 2891 3140 -132 2051 138 0 3 chr10 5780554 5780866 -134535899 + AluSx SINE Alu 1 311 -1 297 143 0 0 chr10 5781091 5781133 -134535632 + MER57A LTR ERV1 295 336 -67 2446 156 34 5 chr10 5781189 5781605 -134535160 - MSTB1 LTR MaLR -1 431 4 2093 103 0 0 chr10 5782072 5782390 -134534375 + AluSx SINE Alu 1 318 0 1087 156 23 37 chr10 5782632 5782850 -134533915 - MER20 DNA MER1_type -4 215 1 2106 118 0 22 chr10 5783177 5783492 -134533273 + AluSx SINE Alu 1 308 -4 2168 86 0 13 chr10 5783500 5783803 -134532962 + AluSg SINE Alu 1 299 -11 26 30 0 0 chr10 5784076 5784109 -134532656 + AT_rich Low_complexity Low_complexity 1 33 0 1709 76 167 8 chr10 5784111 5784362 -134532403 + AluSg SINE Alu 1 291 -9 1371 161 95 0 chr10 5784373 5784646 -134532119 + AluJb SINE Alu 1 299 -13 2080 93 6 29 chr10 5784991 5785304 -134531461 + AluSc SINE Alu 4 309 0 2145 75 34 17 chr10 5785337 5785631 -134531134 + AluSg SINE Alu 1 299 -11 285 250 125 0 chr10 5785755 5785843 -134530922 - MER103 DNA DNA 0 166 68 315 300 119 92 chr10 5785843 5785949 -134530816 + L1ME LINE L1 5553 5655 -507 1726 158 49 0 chr10 5785949 5786233 -134530532 + AluJb SINE Alu 1 298 -14 1936 145 3 0 chr10 5786235 5786539 -134530226 + AluSx SINE Alu 1 305 -7 315 300 119 92 chr10 5786539 5786656 -134530109 + L1ME LINE L1 5655 5785 -377 2155 95 10 0 chr10 5786801 5787106 -134529659 - AluSp SINE Alu -4 309 2 442 279 71 63 chr10 5787247 5787501 -134529264 + HAL1 LINE L1 19 274 -2233 2080 102 3 0 chr10 5787749 5788042 -134528723 - AluSp SINE Alu -19 294 1 1064 88 0 0 chr10 5788042 5788178 -134528587 - AluSq/x SINE Alu -177 136 1 373 223 109 63 chr10 5788205 5788380 -134528385 + MLT1J LTR MaLR 281 463 -48 911 169 0 0 chr10 5788380 5788540 -134528225 - FRAM SINE Alu -12 164 5 529 235 129 42 chr10 5789158 5789375 -134527390 + MLT1H LTR MaLR 109 344 -205 322 207 0 0 chr10 5789449 5789507 -134527258 + MLT1H LTR MaLR 492 549 0 1629 140 0 111 chr10 5789583 5789925 -134526840 + AluJo SINE Alu 1 304 -8 2257 78 10 0 chr10 5789986 5790280 -134526485 + AluSx SINE Alu 1 297 -15 374 251 113 88 chr10 5790864 5791103 -134525662 + L1MC4a LINE L1 5600 5844 -1964 2106 100 7 0 chr10 5791405 5791696 -134525069 + AluSx SINE Alu 1 293 -19 286 286 99 11 chr10 5792002 5792093 -134524672 + L2 LINE L2 1089 1187 -2127 184 280 0 67 chr10 5792159 5792234 -134524531 + MER5A DNA MER1_type 5 74 -115 418 283 44 0 chr10 5792238 5792397 -134524368 + L1MB1 LINE L1 5992 6157 -11 265 250 0 0 chr10 5792397 5792449 -134524316 + LTR30 LTR ERV1 1 52 -670 1844 85 229 178 chr10 5792449 5792955 -134523810 + LTR12 LTR ERV1 53 584 -130 10485 91 10 8 chr10 5792965 5794387 -134522378 + HERV9 LTR ERV1 1277 2700 -5699 2157 65 29 0 chr10 5794487 5794766 -134521999 + AluSp SINE Alu 23 309 -4 901 143 0 0 chr10 5794768 5794901 -134521864 + AluSg/x SINE Alu 134 266 -44 517 341 81 0 chr10 5794906 5795129 -134521636 + L3 LINE CR1 1028 1268 -309 675 248 94 71 chr10 5795158 5795412 -134521353 + MIR SINE MIR 3 262 0 264 178 27 27 chr10 5795574 5795647 -134521118 + L1ME1 LINE L1 6089 6161 -5 358 249 254 46 chr10 5795655 5795852 -134520913 + L1MC4a LINE L1 5941 6178 -1630 180 0 0 0 chr10 5795959 5795979 -134520786 + (A)n Simple_repeat Simple_repeat 1 20 0 1580 179 4 0 chr10 5796008 5796288 -134520477 - AluJo SINE Alu -26 286 6 2214 99 0 10 chr10 5796880 5797183 -134519582 + AluSx SINE Alu 1 300 -12 701 273 24 0 chr10 5797186 5797351 -134519414 - MER58A DNA MER1_type -30 194 26 533 234 117 17 chr10 5797374 5797605 -134519160 + L1ME3A LINE L1 5808 6061 -109 2165 118 0 3 chr10 5797622 5797926 -134518839 + AluSx SINE Alu 1 303 -9 626 164 164 0 chr10 5798392 5798563 -134518202 - Charlie1 DNA MER1_type -5 2756 2558 1326 163 0 25 chr10 5798577 5798817 -134517948 - AluJb SINE Alu -15 297 64 2328 184 58 28 chr10 5798830 5799412 -134517353 - Charlie1 DNA MER1_type -217 2544 1945 270 273 105 49 chr10 5802542 5802685 -134514080 - L2 LINE L2 -186 3086 2936 183 292 42 0 chr10 5802805 5802853 -134513912 - L2 LINE L2 -570 2744 2695 2249 106 0 0 chr10 5802868 5803171 -134513594 - AluSx SINE Alu -9 303 1 207 0 0 0 chr10 5803384 5803407 -134513358 + (TG)n Simple_repeat Simple_repeat 2 24 0 1995 108 9 49 chr10 5803417 5803742 -134513023 - AluSx SINE Alu 0 312 1 1633 162 45 3 chr10 5803789 5804079 -134512686 - AluJb SINE Alu -10 302 1 319 308 0 26 chr10 5804635 5804752 -134512013 + MLT1J1 LTR MaLR 226 339 -107 283 230 54 0 chr10 5804808 5804882 -134511883 + MLT1J1 LTR MaLR 364 441 -5 22 0 0 0 chr10 5805032 5805054 -134511711 + AT_rich Low_complexity Low_complexity 1 22 0 369 265 104 42 chr10 5805817 5805995 -134510770 - MIR3 SINE MIR -51 211 3 194 0 39 0 chr10 5807074 5807100 -134509665 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1810 126 3 18 chr10 5807102 5807387 -134509378 - AluSx SINE Alu -31 281 1 2054 92 23 10 chr10 5808499 5808804 -134507961 + AluSq SINE Alu 1 309 -4 1619 157 21 14 chr10 5808811 5809091 -134507674 + AluJo SINE Alu 1 282 -30 246 357 20 0 chr10 5809198 5809296 -134507469 - L2 LINE L2 -221 3051 2952 697 190 20 77 chr10 5809331 5809490 -134507275 - MER53 DNA DNA -5 184 36 1980 136 0 13 chr10 5809490 5809806 -134506959 - AluSx SINE Alu 0 312 1 697 190 20 77 chr10 5809806 5809841 -134506924 - MER53 DNA DNA -153 36 1 488 290 103 60 chr10 5809968 5810316 -134506449 - MLT1J2 LTR MaLR -24 426 64 2354 87 0 0 chr10 5810321 5810630 -134506135 + AluSg SINE Alu 1 309 -1 1458 163 22 22 chr10 5810738 5810858 -134505907 + AluJb SINE Alu 11 130 -182 2304 91 0 0 chr10 5810858 5811155 -134505610 + AluSx SINE Alu 1 297 -15 1458 163 22 22 chr10 5811155 5811311 -134505454 + AluJb SINE Alu 129 287 -25 1962 145 3 0 chr10 5811588 5811891 -134504874 + AluSx SINE Alu 1 304 -8 199 311 0 0 chr10 5811918 5811963 -134504802 - MIR SINE MIR -137 125 81 1130 139 6 0 chr10 5812481 5812654 -134504111 + AluJo SINE Alu 1 174 -138 2317 211 56 36 chr10 5812754 5813124 -134503641 + L1ME2 LINE L1 5453 5843 -321 1951 133 3 0 chr10 5813124 5813418 -134503347 + AluSq SINE Alu 1 295 -18 2317 211 56 36 chr10 5813418 5813690 -134503075 + L1ME2 LINE L1 5843 6108 -56 29 28 0 0 chr10 5813690 5813726 -134503039 + AT_rich Low_complexity Low_complexity 1 36 0 10369 90 69 4 chr10 5813726 5815367 -134501398 - L1PBa LINE L1 -3802 3060 1311 373 169 0 0 chr10 5815370 5815429 -134501336 - L1PBa LINE L1 -5705 1158 1100 21 57 0 0 chr10 5815466 5815501 -134501264 + AT_rich Low_complexity Low_complexity 1 35 0 2092 130 0 3 chr10 5815841 5816148 -134500617 - AluSx SINE Alu -6 306 1 2170 95 17 0 chr10 5816637 5816932 -134499833 - AluSx SINE Alu -7 305 6 2053 114 3 10 chr10 5817697 5817994 -134498771 + AluSq SINE Alu 5 299 -14 541 176 231 0 chr10 5818661 5818769 -134497996 - FLAM_C SINE Alu 0 133 1 339 118 88 137 chr10 5818917 5818965 -134497800 + Tigger2 DNA MER2_type 1 43 -2675 1347 130 74 9 chr10 5818965 5819181 -134497584 + MER30 DNA MER1_type 1 230 0 339 118 88 137 chr10 5819181 5819234 -134497531 + Tigger2 DNA MER2_type 43 97 -2621 1925 127 3 20 chr10 5819237 5819537 -134497228 - AluSx SINE Alu -17 295 1 1590 151 52 17 chr10 5819579 5819870 -134496895 - AluJo SINE Alu -11 301 1 849 211 0 61 chr10 5819876 5820056 -134496709 - FAM SINE Alu -6 169 1 3530 132 78 8 chr10 5820056 5820668 -134496097 + Tigger2 DNA MER2_type 90 744 -1974 883 144 25 80 chr10 5820734 5820832 -134495933 + Tigger2 DNA MER2_type 2451 2534 -174 1959 136 0 7 chr10 5820832 5821133 -134495632 + AluSq SINE Alu 1 299 -14 883 144 25 80 chr10 5821133 5821235 -134495530 + Tigger2 DNA MER2_type 2534 2640 -68 640 159 9 0 chr10 5821237 5821344 -134495421 - Tigger1 DNA MER2_type -734 1684 1577 691 193 0 30 chr10 5821344 5821479 -134495286 + FLAM_C SINE Alu 1 131 -2 1147 176 36 40 chr10 5821517 5821767 -134494998 + AluJo SINE Alu 38 286 -26 464 298 105 34 chr10 5822109 5822347 -134494418 + MIR SINE MIR 7 261 -1 583 222 0 17 chr10 5822430 5822547 -134494218 + L2 LINE L2 3192 3306 -7 1471 152 50 21 chr10 5822886 5823169 -134493596 - AluJb SINE Alu -21 291 1 699 168 0 9 chr10 5823396 5823509 -134493256 + FLAM_C SINE Alu 2 113 -30 391 283 65 14 chr10 5824076 5824214 -134492551 - L2 LINE L2 -6 3266 3122 408 372 5 16 chr10 5824287 5824475 -134492290 - MIR SINE MIR -69 193 8 1926 125 3 0 chr10 5824503 5824791 -134491974 + AluJb SINE Alu 2 290 -22 555 235 62 0 chr10 5825791 5825953 -134490812 + L1ME LINE L1 5177 5348 -798 598 144 161 34 chr10 5826010 5826128 -134490637 - FLAM_C SINE Alu 0 133 1 1161 228 172 3 chr10 5826150 5826505 -134490260 + L1ME LINE L1 5386 5800 -370 494 296 123 0 chr10 5826516 5826678 -134490087 + MER5A DNA MER1_type 3 184 -5 254 174 43 0 chr10 5826686 5826732 -134490033 + MER5A DNA MER1_type 2 49 -140 1421 170 4 18 chr10 5826743 5827020 -134489745 + AluJb SINE Alu 9 281 -31 707 205 24 0 chr10 5827052 5827179 -134489586 + MER5A DNA MER1_type 56 185 -4 253 161 214 0 chr10 5827184 5827240 -134489525 - MER5A DNA MER1_type -114 75 8 2280 92 3 0 chr10 5827287 5827592 -134489173 + AluSx SINE Alu 1 306 -6 739 192 58 12 chr10 5828203 5828375 -134488390 - L1MA10 LINE L1 -11 6323 6144 2037 135 0 3 chr10 5828523 5828827 -134487938 + AluSx SINE Alu 1 303 -9 1651 154 26 7 chr10 5828913 5829218 -134487547 + AluSx SINE Alu 1 311 -1 1648 173 16 7 chr10 5829279 5829585 -134487180 + AluJo SINE Alu 3 311 -1 1941 152 0 0 chr10 5829590 5829899 -134486866 + AluSx SINE Alu 4 312 0 247 230 292 6 chr10 5829918 5830079 -134486686 + L1MC4 LINE L1 7689 7895 -147 1493 178 176 69 chr10 5831112 5831162 -134485603 + Charlie1a DNA MER1_type 65 108 -2653 2101 108 7 7 chr10 5831162 5831468 -134485297 - AluSq SINE Alu -7 306 1 1493 178 176 69 chr10 5831468 5831613 -134485152 + Charlie1a DNA MER1_type 108 236 -2525 1857 140 3 3 chr10 5831613 5831906 -134484859 + AluSp SINE Alu 5 297 -16 1493 178 176 69 chr10 5831906 5831944 -134484821 + Charlie1a DNA MER1_type 236 269 -2492 1646 171 11 0 chr10 5831944 5832231 -134484534 + AluSx SINE Alu 1 290 -22 1493 178 176 69 chr10 5832231 5832534 -134484231 + Charlie1a DNA MER1_type 269 661 -794 2157 91 0 0 chr10 5832534 5832819 -134483946 + AluSc SINE Alu 1 285 -24 541 82 61 10 chr10 5832919 5833017 -134483748 + HERV17 LTR ERV1 3037 3139 -5260 6308 91 8 11 chr10 5833024 5833892 -134482873 + HERV17 LTR ERV1 4080 4944 -3455 2063 132 77 90 chr10 5833893 5834815 -134481950 + HERV17 LTR ERV1 703 1740 -5156 * 5642 92 8 12 chr10 5834813 5835586 -134481179 + HERV17 LTR ERV1 7626 8395 -4 250 269 0 0 chr10 5835591 5835643 -134481122 + LTR30 LTR ERV1 1 52 -670 1031 77 8 0 chr10 5835643 5835773 -134480992 + LTR12 LTR ERV1 53 183 -531 289 93 0 0 chr10 5835756 5835799 -134480966 + pTR5 LTR ERV1 1963 2005 -433 * 357 204 45 68 chr10 5835799 5835931 -134480834 + LTR30 LTR ERV1 552 723 -71 1338 132 14 7 chr10 5835931 5836137 -134480628 + LTR12 LTR ERV1 276 581 -133 1273 94 124 0 chr10 5836171 5836373 -134480392 - MER30 DNA MER1_type 0 230 4 686 233 14 0 chr10 5836375 5836521 -134480244 + L1MA10 LINE L1 6186 6333 -1 249 254 56 0 chr10 5836535 5836606 -134480159 + MER5A DNA MER1_type 62 136 -53 541 259 73 0 chr10 5836647 5836852 -134479913 + L2 LINE L2 1301 1520 -1794 755 106 89 0 chr10 5837000 5837123 -134479642 - L1PA16 LINE L1 -9 6157 6024 212 236 145 21 chr10 5837264 5837434 -134479331 + L2 LINE L2 1638 1876 -1438 1724 129 71 4 chr10 5837588 5837868 -134478897 - AluJo SINE Alu -13 299 1 2114 85 3 0 chr10 5838288 5838611 -134478154 + AluSp SINE Alu 1 324 0 182 235 82 71 chr10 5839145 5839243 -134477522 + L2 LINE L2 1903 2001 -1313 1992 130 7 0 chr10 5839380 5839681 -134477084 + AluSx SINE Alu 1 303 -9 2312 73 0 0 chr10 5839750 5840039 -134476726 - AluY SINE Alu -22 289 1 1925 121 3 48 chr10 5840044 5840212 -134476553 - AluSx SINE Alu -12 300 151 2151 100 0 3 chr10 5840212 5840512 -134476253 - AluY SINE Alu -11 300 2 1925 121 3 48 chr10 5840512 5840657 -134476108 - AluSx SINE Alu -161 151 1 308 184 53 13 chr10 5840687 5840763 -134476002 + L1ME4a LINE L1 5998 6076 -45 2073 105 7 0 chr10 5841084 5841370 -134475395 - AluSc SINE Alu -19 290 3 259 258 15 0 chr10 5842415 5842481 -134474284 + MIR SINE MIR 179 245 -17 24 0 0 0 chr10 5842515 5842539 -134474226 + AT_rich Low_complexity Low_complexity 1 24 0 681 280 14 14 chr10 5842553 5842764 -134474001 - L2 LINE L2 -104 3209 2999 1265 111 0 0 chr10 5842894 5843066 -134473699 - AluSg/x SINE Alu -10 302 131 180 0 0 0 chr10 5843066 5843086 -134473679 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2162 85 0 0 chr10 5843086 5843367 -134473398 - AluSx SINE Alu -31 281 1 222 161 36 36 chr10 5844035 5844091 -134472674 + A-rich Low_complexity Low_complexity 3 58 0 2058 134 0 0 chr10 5844290 5844596 -134472169 - AluSx SINE Alu -6 306 1 2026 109 41 0 chr10 5845701 5845994 -134470771 + AluSg SINE Alu 1 305 -5 2112 99 20 0 chr10 5846375 5846667 -134470098 + AluSx SINE Alu 1 298 -14 1782 127 6 47 chr10 5847079 5847401 -134469364 + AluSx SINE Alu 1 309 -3 210 179 21 53 chr10 5847684 5847779 -134468986 + (CAAA)n Simple_repeat Simple_repeat 3 94 0 1553 115 51 0 chr10 5847950 5848184 -134468581 + AluSg SINE Alu 61 306 -4 2111 103 20 0 chr10 5848564 5848856 -134467909 + AluSx SINE Alu 1 298 -14 1956 119 3 49 chr10 5849249 5849576 -134467189 + AluSx SINE Alu 1 312 0 2977 88 65 18 chr10 5849801 5850245 -134466520 - MER4C LTR ERV1 0 465 1 957 135 0 0 chr10 5850338 5850471 -134466294 - FLAM_C SINE Alu 0 133 1 39 0 0 37 chr10 5850771 5850807 -134465958 + AT_rich Low_complexity Low_complexity 1 37 -15 390 21 0 0 chr10 5850807 5850854 -134465911 + (TA)n Simple_repeat Simple_repeat 2 48 0 1916 96 0 41 chr10 5850854 5851062 -134465703 - AluSc SINE Alu -28 281 87 2308 71 7 0 chr10 5851062 5851359 -134465406 - AluY SINE Alu -12 299 1 1916 96 0 41 chr10 5851359 5851443 -134465322 - AluSc SINE Alu -222 87 1 39 0 0 37 chr10 5851443 5851459 -134465306 + AT_rich Low_complexity Low_complexity 35 52 0 1247 98 0 0 chr10 5851634 5851798 -134464967 + AluSg SINE Alu 1 164 -146 227 83 0 42 chr10 5851828 5851876 -134464889 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 1722 142 69 0 chr10 5852692 5852967 -134463798 - AluSx SINE Alu -18 294 1 417 307 102 28 chr10 5853069 5853284 -134463481 - MIR SINE MIR -16 246 16 330 376 16 11 chr10 5853629 5853815 -134462950 + L2 LINE L2 2362 2548 -766 2203 111 0 9 chr10 5853821 5854137 -134462628 + AluSq SINE Alu 1 313 0 461 346 77 58 chr10 5854149 5854543 -134462222 + L2 LINE L2 2832 3236 -36 2313 69 0 7 chr10 5854543 5854848 -134461917 - AluY SINE Alu -2 309 7 461 346 77 58 chr10 5854848 5854881 -134461884 + L2 LINE L2 3236 3267 -5 355 302 116 32 chr10 5854910 5855099 -134461666 - L1 LINE L1 -751 5395 5191 2071 116 0 0 chr10 5855692 5855985 -134460780 + AluSx SINE Alu 12 304 -8 447 244 58 47 chr10 5856427 5856599 -134460166 - MIR SINE MIR -3 259 86 2065 81 0 39 chr10 5856747 5857054 -134459711 - AluSq SINE Alu -15 298 4 311 237 166 22 chr10 5857901 5858040 -134458725 + L1MD2 LINE L1 6053 6211 -148 25 31 0 0 chr10 5858615 5858647 -134458118 + GC_rich Low_complexity Low_complexity 1 32 0 227 182 26 52 chr10 5858712 5858789 -134457976 + (CCGGG)n Simple_repeat Simple_repeat 1 75 0 32 0 0 0 chr10 5859659 5859691 -134457074 + GC_rich Low_complexity Low_complexity 1 32 0 232 221 14 64 chr10 5859799 5859939 -134456826 + G-rich Low_complexity Low_complexity 2 134 0 196 296 111 68 chr10 5860333 5860495 -134456270 - MIR SINE MIR -20 242 74 2106 83 3 10 chr10 5860995 5861283 -134455482 - AluSx SINE Alu -26 286 1 1797 130 3 18 chr10 5862395 5862708 -134454057 + AluSx SINE Alu 1 309 0 409 265 96 42 chr10 5863787 5863966 -134452799 + MIR3 SINE MIR 3 211 -51 22 0 0 0 chr10 5864729 5864751 -134452014 + AT_rich Low_complexity Low_complexity 1 22 0 450 282 26 11 chr10 5864901 5865306 -134451459 - MLT1J1 LTR MaLR -5 441 37 1889 176 22 35 chr10 5867500 5867783 -134448982 - MLT1A1 LTR MaLR 0 365 87 2183 131 3 0 chr10 5867783 5868081 -134448684 - AluSx SINE Alu -13 299 1 1889 176 22 35 chr10 5868081 5868167 -134448598 - MLT1A1 LTR MaLR -278 87 1 257 0 30 0 chr10 5868672 5868705 -134448060 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 313 71 0 0 chr10 5869689 5869731 -134447034 - 5S rRNA rRNA -79 42 1 2227 142 0 0 chr10 5870186 5870496 -134446269 + AluSx SINE Alu 1 310 -2 2093 98 56 3 chr10 5870544 5870829 -134445936 - AluSq SINE Alu -13 300 1 2225 129 13 0 chr10 5870926 5871235 -134445530 - AluSq SINE Alu 0 313 1 218 337 36 12 chr10 5871435 5871518 -134445247 + L3b LINE CR1 1404 1488 -95 23 97 0 0 chr10 5871689 5871761 -134445004 + AT_rich Low_complexity Low_complexity 1 72 0 1164 126 0 6 chr10 5871865 5872024 -134444741 - AluSg/x SINE Alu -39 270 113 327 125 0 0 chr10 5872044 5872100 -134444665 - Alu SINE Alu -245 56 1 2351 77 7 0 chr10 5872703 5873000 -134443765 - AluSp SINE Alu -14 299 1 1632 141 87 7 chr10 5873427 5873704 -134443061 - AluJo SINE Alu -13 299 1 750 148 0 41 chr10 5873946 5874068 -134442697 + FLAM_C SINE Alu 2 118 -25 31 0 0 0 chr10 5874068 5874099 -134442666 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr10 5874201 5874242 -134442523 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr10 5874550 5874574 -134442191 + AT_rich Low_complexity Low_complexity 1 24 0 2058 126 3 7 chr10 5874606 5874932 -134441833 + AluSx SINE Alu 1 312 0 2218 109 3 10 chr10 5876334 5876636 -134440129 - AluSx SINE Alu -12 300 1 180 0 0 0 chr10 5876641 5876661 -134440104 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2431 215 11 70 chr10 5876661 5876844 -134439921 - L1M4 LINE L1 -3119 3027 2835 2126 151 0 0 chr10 5876844 5877143 -134439622 - AluSx SINE Alu -11 301 3 2431 215 11 70 chr10 5877143 5877713 -134439052 - L1M4 LINE L1 -3311 2835 2319 260 293 104 47 chr10 5877752 5877858 -134438907 - MIR SINE MIR -63 145 34 1929 97 0 34 chr10 5877966 5878234 -134438531 - AluSx SINE Alu -5 307 49 575 330 58 5 chr10 5878839 5879027 -134437738 - L3 LINE CR1 -1 1576 1379 262 287 41 49 chr10 5879025 5879147 -134437618 - MIR3 SINE MIR -87 121 1 * 2248 119 0 0 chr10 5879371 5879666 -134437099 + AluSx SINE Alu 1 295 -17 326 356 108 16 chr10 5881077 5881383 -134435382 - L2 LINE L2 -118 3195 2862 1976 131 10 13 chr10 5881451 5881749 -134435016 + AluSx SINE Alu 1 297 -15 366 250 117 51 chr10 5882034 5882230 -134434535 - MLT1A2 LTR MaLR -156 209 1 260 295 82 16 chr10 5883294 5883416 -134433349 - L1MB7 LINE L1 -9 6175 6046 423 284 216 21 chr10 5884215 5884409 -134432356 - MIR SINE MIR 0 262 31 646 263 72 0 chr10 5888098 5888292 -134428473 + Charlie1 DNA MER1_type 1787 1994 -767 1455 224 69 16 chr10 5888295 5888574 -134428191 + Charlie1 DNA MER1_type 2307 2619 -142 2264 120 0 0 chr10 5888574 5888865 -134427900 + AluSx SINE Alu 1 291 -21 1455 224 69 16 chr10 5888865 5889017 -134427748 + Charlie1 DNA MER1_type 2619 2761 0 3638 173 57 16 chr10 5889204 5889973 -134426792 - L1MC3 LINE L1 -18 7767 6967 366 271 90 23 chr10 5891263 5891436 -134425329 + MIR3 SINE MIR 6 190 -64 198 257 157 14 chr10 5891491 5891561 -134425204 - L2 LINE L2 0 3272 3193 2157 126 3 0 chr10 5892260 5892553 -134424212 - AluSx SINE Alu -18 294 1 203 56 56 0 chr10 5892932 5892968 -134423797 + A-rich Low_complexity Low_complexity 3 40 0 396 280 10 0 chr10 5893506 5893606 -134423159 - MIR3 SINE MIR -100 108 8 2169 115 10 0 chr10 5893940 5894236 -134422529 - AluSq SINE Alu -14 299 1 239 198 136 37 chr10 5894374 5894455 -134422310 + MIR SINE MIR 54 142 -66 815 131 0 16 chr10 5895311 5895433 -134421332 - FLAM_C SINE Alu -15 128 9 2266 109 23 0 chr10 5895481 5895784 -134420981 - AluSx SINE Alu -2 310 1 308 217 0 0 chr10 5896121 5896181 -134420584 - L1MB8 LINE L1 -18 6160 6101 265 293 75 45 chr10 5896347 5896480 -134420285 + MIR3 SINE MIR 1 137 -71 2378 108 0 3 chr10 5897160 5897467 -134419298 + AluSx SINE Alu 1 306 -6 2038 146 3 0 chr10 5897516 5897810 -134418955 - AluJo SINE Alu -7 305 11 428 289 78 8 chr10 5898461 5898589 -134418176 - L2 LINE L2 -16 3297 3161 915 262 23 0 chr10 5898924 5899138 -134417627 - MER58A DNA MER1_type -5 219 1 240 238 130 77 chr10 5899647 5899908 -134416857 - L1MC5 LINE L1 -384 7577 7303 1586 143 10 68 chr10 5900123 5900417 -134416348 - AluJb SINE Alu -19 293 17 312 291 156 33 chr10 5901041 5901234 -134415531 - L1MC4a LINE L1 -1487 6321 6153 1955 160 0 10 chr10 5901234 5901534 -134415231 + AluSx SINE Alu 3 299 -13 312 291 156 33 chr10 5901534 5901762 -134415003 - L1MC4a LINE L1 -1655 6153 5848 792 254 65 65 chr10 5901830 5902083 -134414682 - L1MC4a LINE L1 -1950 5858 5602 1818 156 7 3 chr10 5902083 5902387 -134414378 - AluJb SINE Alu 0 305 1 792 254 65 65 chr10 5902387 5902471 -134414294 - L1MC4a LINE L1 -2205 5603 5520 2304 120 0 0 chr10 5902476 5902777 -134413988 + AluSx SINE Alu 1 301 -11 2018 142 0 29 chr10 5903013 5903322 -134413443 - AluSx SINE Alu -12 300 1 2193 115 3 16 chr10 5903735 5904048 -134412717 - AluSx SINE Alu -3 309 1 1510 151 120 8 chr10 5904081 5904339 -134412426 - AluSg1 SINE Alu -9 300 14 21 0 0 0 chr10 5904346 5904367 -134412398 + AT_rich Low_complexity Low_complexity 1 21 0 256 248 62 69 chr10 5904368 5904513 -134412252 - MER112 DNA MER1_type -51 209 66 311 283 91 0 chr10 5904575 5904674 -134412091 + L1ME LINE L1 5671 5778 -343 317 342 90 0 chr10 5905250 5905405 -134411360 - MIR SINE MIR -19 243 75 23 0 0 0 chr10 5905597 5905620 -134411145 + AT_rich Low_complexity Low_complexity 1 23 0 28 48 0 0 chr10 5906886 5906928 -134409837 + AT_rich Low_complexity Low_complexity 1 42 0 626 168 62 62 chr10 5907120 5907281 -134409484 + AluJb SINE Alu 134 294 -18 205 291 204 67 chr10 5907287 5907404 -134409361 - L2 LINE L2 -668 2646 2546 883 216 22 0 chr10 5907404 5907589 -134409176 + MER5A DNA MER1_type 1 189 0 205 291 204 67 chr10 5907589 5908158 -134408607 - L2 LINE L2 -768 2546 1866 222 37 0 0 chr10 5908266 5908293 -134408472 + (TG)n Simple_repeat Simple_repeat 2 28 0 391 249 118 70 chr10 5908350 5908543 -134408222 + HAL1 LINE L1 845 1027 -1480 1649 93 19 5 chr10 5908543 5908758 -134408007 + AluSx SINE Alu 1 218 -94 391 249 118 70 chr10 5908758 5908896 -134407869 + HAL1 LINE L1 1027 1201 -1306 1920 144 37 3 chr10 5908896 5909195 -134407570 + AluSx SINE Alu 1 309 -3 391 249 118 70 chr10 5909195 5909260 -134407505 + HAL1 LINE L1 1201 1261 -1246 2273 97 0 0 chr10 5909286 5909575 -134407190 - AluY SINE Alu -22 289 1 232 167 0 0 chr10 5909711 5909759 -134407006 + Alu SINE Alu 255 302 0 388 270 44 73 chr10 5909759 5909856 -134406909 + HAL1 LINE L1 1190 1288 -1219 2343 87 0 0 chr10 5909856 5910145 -134406620 - AluY SINE Alu -22 289 1 388 270 44 73 chr10 5910145 5910251 -134406514 + HAL1 LINE L1 1288 1387 -1120 1709 134 19 11 chr10 5910253 5910521 -134406244 + AluJo SINE Alu 1 270 -42 275 246 115 71 chr10 5910702 5910954 -134405811 + HAL1 LINE L1 2245 2507 0 1739 158 4 7 chr10 5911231 5911504 -134405261 - AluJo SINE Alu -15 297 26 2441 109 0 0 chr10 5912863 5913175 -134403590 - AluSx SINE Alu 0 312 1 1039 275 67 73 chr10 5913792 5914461 -134402304 + PABL_B LTR ERV1 1 665 -2 386 238 69 10 chr10 5914468 5914569 -134402196 - MLT1L LTR MaLR -339 276 170 351 357 85 5 chr10 5914739 5914963 -134401802 - MIR SINE MIR -9 253 12 866 163 12 25 chr10 5915356 5915516 -134401249 - FRAM SINE Alu -17 159 2 2330 102 0 0 chr10 5916476 5916769 -134399996 + AluSx SINE Alu 1 293 -19 1895 138 24 3 chr10 5917331 5917620 -134399145 - AluJb SINE Alu -17 295 1 2295 107 0 0 chr10 5918510 5918808 -134397957 - AluSx SINE Alu -14 298 1 26 30 0 0 chr10 5918831 5918864 -134397901 + AT_rich Low_complexity Low_complexity 1 33 0 2283 104 3 0 chr10 5919756 5920045 -134396720 + AluSx SINE Alu 2 291 -21 535 144 72 0 chr10 5920217 5920314 -134396451 - L1PA16 LINE L1 -5 6161 6058 193 245 20 20 chr10 5920412 5920461 -134396304 - L2 LINE L2 -3 3310 3262 411 243 27 70 chr10 5920549 5920734 -134396031 + MLT1H LTR MaLR 107 283 -266 2269 104 0 16 chr10 5920796 5921112 -134395653 + AluY SINE Alu 1 311 0 903 145 45 73 chr10 5921112 5921282 -134395483 + AluSg/x SINE Alu 126 292 -18 1960 149 17 7 chr10 5921484 5921773 -134394992 + AluSx SINE Alu 1 292 -20 886 150 0 0 chr10 5921773 5921898 -134394867 - AluJo SINE Alu -182 130 3 363 259 54 45 chr10 5921911 5922023 -134394742 + MIR3 SINE MIR 53 165 -43 677 189 0 0 chr10 5923362 5923468 -134393297 + FLAM_C SINE Alu 2 107 -36 544 138 0 0 chr10 5924103 5924197 -134392568 - AluJ/FRAM SINE Alu -3 309 216 831 157 64 7 chr10 5924205 5924345 -134392420 - AluSq/x SINE Alu -164 148 1 842 152 0 45 chr10 5924402 5924534 -134392231 - FLAM_C SINE Alu -17 126 1 2284 101 3 0 chr10 5925042 5925339 -134391426 - AluSp SINE Alu -15 298 1 2434 96 0 0 chr10 5925954 5926255 -134390510 - AluSx SINE Alu -11 301 1 2312 109 0 31 chr10 5926880 5927201 -134389564 - AluSx SINE Alu -1 311 1 2281 125 0 0 chr10 5927211 5927514 -134389251 - AluSg SINE Alu -7 303 1 2200 126 3 0 chr10 5927523 5927832 -134388933 - AluSx SINE Alu -2 310 1 512 275 108 12 chr10 5927948 5928188 -134388577 + L1MC4a LINE L1 5636 5898 -1910 1890 171 0 3 chr10 5928323 5928627 -134388138 - AluSx SINE Alu -9 303 1 248 239 0 45 chr10 5928878 5928945 -134387820 + C-rich Low_complexity Low_complexity 4 67 0 907 119 8 15 chr10 5929111 5929245 -134387520 - FLAM_C SINE Alu 0 133 1 1712 153 0 67 chr10 5930740 5930852 -134385913 + AluJo SINE Alu 1 119 -193 2272 119 0 3 chr10 5930852 5931155 -134385610 - AluSx SINE Alu -10 302 1 1712 153 0 67 chr10 5931155 5931356 -134385409 + AluJo SINE Alu 119 293 -19 2304 117 0 0 chr10 5932250 5932550 -134384215 + AluSx SINE Alu 1 300 -12 1311 262 91 12 chr10 5932981 5933409 -134383356 + LTR40b LTR ERVL 1 462 0 1944 143 0 29 chr10 5934100 5934408 -134382357 - AluJo SINE Alu -13 299 1 288 326 30 30 chr10 5935486 5935618 -134381147 - MIR SINE MIR -111 151 20 2406 95 0 0 chr10 5935657 5935961 -134380804 - AluSx SINE Alu -8 304 1 1418 80 0 6 chr10 5936715 5936890 -134379875 + AluSq SINE Alu 87 260 -53 778 93 0 0 chr10 5936891 5936988 -134379777 - AluS SINE Alu -214 98 2 387 60 0 0 chr10 5937106 5937156 -134379609 + (CCTTG)n Simple_repeat Simple_repeat 2 51 0 2325 95 0 0 chr10 5937158 5937443 -134379322 - AluSc SINE Alu -24 285 1 183 265 157 20 chr10 5937537 5937639 -134379126 - L2 LINE L2 -2 3270 3155 2142 115 3 3 chr10 5937717 5938013 -134378752 + AluSx SINE Alu 1 296 -16 708 287 87 53 chr10 5938448 5938954 -134377811 - L1MCc LINE L1 -5185 1238 716 479 268 43 39 chr10 5938969 5939223 -134377542 - L1M4 LINE L1 -1306 4840 4586 308 56 33 89 chr10 5939234 5939324 -134377441 + (TTAAA)n Simple_repeat Simple_repeat 1 85 0 1684 154 50 18 chr10 5939324 5939604 -134377161 - AluJo SINE Alu -23 289 1 1354 234 37 23 chr10 5939607 5940039 -134376726 - L1M4 LINE L1 -1495 4651 4214 1136 199 44 17 chr10 5940038 5940335 -134376430 - L1MEc LINE L1 -4243 2153 1849 * 377 248 9 9 chr10 5940335 5940448 -134376317 - L1MEc LINE L1 -6004 201 89 1489 156 13 0 chr10 5940629 5940944 -134375821 - AluJo SINE Alu 0 372 55 197 264 99 22 chr10 5941508 5941599 -134375166 - L2 LINE L2 -21 3251 3154 221 344 65 42 chr10 5941953 5942168 -134374597 + L2 LINE L2 2544 2763 -551 354 67 0 0 chr10 5942295 5942374 -134374391 - Alu SINE Alu 0 319 241 841 225 34 41 chr10 5943176 5943443 -134373322 - L1M4 LINE L1 -1592 4554 4290 1934 194 35 28 chr10 5943444 5943926 -134372839 + L1ME1 LINE L1 4832 5316 -849 2022 112 0 0 chr10 5943965 5944232 -134372533 - AluSx SINE Alu -37 275 9 1144 217 56 11 chr10 5944243 5944529 -134372236 + L1ME1 LINE L1 5303 5601 -565 2328 116 0 0 chr10 5944535 5944846 -134371919 + AluSx SINE Alu 1 311 -1 33 0 0 0 chr10 5944846 5944879 -134371886 + AT_rich Low_complexity Low_complexity 1 33 0 520 206 0 11 chr10 5944881 5944973 -134371792 + AluJb SINE Alu 205 295 -17 1833 225 48 33 chr10 5944973 5945538 -134371227 + L1ME1 LINE L1 5596 6334 0 2213 101 3 29 chr10 5945545 5945861 -134370904 + AluSg SINE Alu 1 308 -2 22 0 0 0 chr10 5947409 5947431 -134369334 + GC_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 5948064 5948094 -134368671 + GC_rich Low_complexity Low_complexity 1 30 0 507 126 53 0 chr10 5948456 5948551 -134368214 + L1PA13 LINE L1 6064 6163 0 2162 121 3 10 chr10 5948556 5948869 -134367896 + AluSx SINE Alu 1 311 -1 414 276 34 63 chr10 5949211 5949450 -134367315 - L1ME LINE L1 -394 5727 5496 21 57 0 0 chr10 5949453 5949488 -134367277 + AT_rich Low_complexity Low_complexity 1 35 0 2394 97 0 0 chr10 5949862 5950162 -134366603 + AluSx SINE Alu 1 300 -12 2274 155 27 12 chr10 5950182 5950588 -134366177 + Tigger4(Zombi) DNA MER2_type 1 412 -2319 830 87 0 0 chr10 5950589 5950692 -134366073 + FLAM_C SINE Alu 1 103 -40 779 201 7 0 chr10 5950696 5950835 -134365930 - AluJo SINE Alu -149 163 24 4505 142 25 16 chr10 5950835 5951609 -134365156 + Tigger4(Zombi) DNA MER2_type 1207 1987 -744 2022 150 0 16 chr10 5951954 5952268 -134364497 - AluJb SINE Alu -3 309 1 3065 149 19 21 chr10 5952268 5952822 -134363943 + Tigger4(Zombi) DNA MER2_type 2177 2731 0 1949 211 67 19 chr10 5953494 5954014 -134362751 - L1MD2 LINE L1 -2 6357 5813 1591 203 53 58 chr10 5954090 5954468 -134362297 - MLT1C LTR MaLR 0 467 90 2263 109 0 3 chr10 5954468 5954772 -134361993 + AluSg SINE Alu 6 308 -2 1591 203 53 58 chr10 5954772 5954862 -134361903 - MLT1C LTR MaLR -377 90 1 2131 137 0 0 chr10 5955378 5955685 -134361080 - AluJb SINE Alu -5 307 1 1470 103 0 10 chr10 5956543 5956738 -134360027 - AluSx SINE Alu -119 193 1 1684 181 0 7 chr10 5957120 5957396 -134359369 - AluJo SINE Alu -38 274 1 783 205 56 0 chr10 5957483 5957644 -134359121 + MIR SINE MIR 89 258 -4 1819 174 3 0 chr10 5958423 5958721 -134358044 - AluJb SINE Alu -2 310 12 2203 123 7 10 chr10 5958833 5959143 -134357622 + AluSx SINE Alu 3 311 -1 262 278 0 14 chr10 5959360 5959432 -134357333 - AluY SINE Alu -17 284 214 1757 102 0 0 chr10 5959854 5960080 -134356685 + AluSq SINE Alu 74 299 -14 1764 106 75 4 chr10 5960188 5960443 -134356322 - AluSx SINE Alu -35 277 5 2177 85 14 7 chr10 5960811 5961117 -134355648 + AluY SINE Alu 1 308 0 182 292 42 14 chr10 5961521 5961593 -134355172 + L2 LINE L2 2735 2808 -506 3989 210 97 16 chr10 5962493 5963597 -134353168 + L1MC4 LINE L1 6469 7661 -381 414 228 350 5 chr10 5963638 5963844 -134352921 + L1MC4 LINE L1 7763 8039 -3 2169 119 3 0 chr10 5968679 5968973 -134347792 - AluSx SINE Alu -17 295 1 181 281 18 0 chr10 5969237 5969294 -134347471 + L3b LINE CR1 1315 1372 -211 1537 119 14 0 chr10 5969546 5969765 -134347000 + AluSx SINE Alu 5 226 -86 1997 122 0 4 chr10 5969867 5970146 -134346619 + AluSq SINE Alu 1 278 -35 270 0 0 0 chr10 5970147 5970177 -134346588 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 596 269 75 21 chr10 5970919 5971105 -134345660 + MIR SINE MIR 41 236 -26 21 36 0 0 chr10 5971514 5971542 -134345223 + AT_rich Low_complexity Low_complexity 1 28 0 298 325 35 9 chr10 5972540 5972654 -134344111 - MIR3 SINE MIR -45 163 47 304 254 5 42 chr10 5973237 5973337 -134343428 + MER5A DNA MER1_type 13 98 -80 378 228 8 63 chr10 5973379 5973506 -134343259 - MIR SINE MIR -141 121 2 184 250 42 0 chr10 5975226 5975274 -134341491 - L2 LINE L2 -80 3233 3184 2096 105 0 28 chr10 5977205 5977514 -134339251 + AluSc SINE Alu 1 301 0 1392 119 0 99 chr10 5977916 5978039 -134338726 + AluJb SINE Alu 1 88 -224 2354 75 3 0 chr10 5978039 5978332 -134338433 - AluSg SINE Alu -16 294 1 1392 119 0 99 chr10 5978332 5978461 -134338304 + AluJb SINE Alu 88 228 -84 1279 169 139 4 chr10 5979477 5979743 -134337022 + AluJo SINE Alu 1 302 0 575 262 120 43 chr10 5980885 5980955 -134335810 - MER112 DNA MER1_type -9 251 188 2008 125 31 0 chr10 5980955 5981244 -134335521 - AluSx SINE Alu -14 298 1 575 262 120 43 chr10 5981244 5981406 -134335359 - MER112 DNA MER1_type -72 188 1 1500 154 85 24 chr10 5981632 5981925 -134334840 + AluJo SINE Alu 1 311 -1 503 271 8 0 chr10 5982028 5982150 -134334615 - MER58B DNA MER1_type -3 338 216 1844 153 11 3 chr10 5982941 5983223 -134333542 - AluSx SINE Alu -28 284 1 829 150 8 0 chr10 5984917 5985050 -134331715 - AluJb SINE Alu -177 135 2 2097 119 3 0 chr10 5985096 5985403 -134331362 - AluSx SINE Alu 0 312 1 230 229 193 0 chr10 5985596 5985679 -134331086 + MIR SINE MIR 78 176 -86 1836 104 93 11 chr10 5985835 5986114 -134330651 - AluSc SINE Alu -7 302 1 1772 158 14 10 chr10 5986231 5986528 -134330237 - AluJb SINE Alu -12 300 3 303 241 76 0 chr10 5986541 5986620 -134330145 - L2 LINE L2 0 3313 3229 23 33 0 0 chr10 5986629 5986659 -134330106 + AT_rich Low_complexity Low_complexity 1 30 0 370 168 118 42 chr10 5986774 5986893 -134329872 - MER106A DNA MER1_type -1 235 108 407 287 10 0 chr10 5987078 5987179 -134329586 - L2 LINE L2 -954 2360 2259 283 313 47 7 chr10 5987187 5987337 -134329428 - L2 LINE L2 -1261 2053 1898 1562 182 0 47 chr10 5988689 5988985 -134327780 - AluJo SINE Alu -30 282 1 2413 76 26 0 chr10 5989049 5989352 -134327413 - AluY SINE Alu 0 311 1 1627 134 35 29 chr10 5989352 5989712 -134327053 + Tigger7 DNA MER2_type 180 2573 -14 27 0 0 0 chr10 5989721 5989748 -134327017 + AT_rich Low_complexity Low_complexity 1 27 0 347 138 11 0 chr10 5989773 5989860 -134326905 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 64 0 0 chr10 5989878 5989925 -134326840 + AT_rich Low_complexity Low_complexity 1 47 0 2508 58 0 16 chr10 5991115 5991426 -134325339 + AluY SINE Alu 2 307 -4 783 157 3 13 chr10 5991564 5991714 -134325051 + L1P3 LINE L1 5668 5805 -349 1529 159 34 102 chr10 5991715 5991983 -134324782 + MER7A DNA MER2_type 21 259 -2779 1992 130 0 0 chr10 5991983 5992259 -134324506 + AluSc SINE Alu 1 276 -33 1529 159 34 102 chr10 5992259 5992342 -134324423 + MER7A DNA MER2_type 259 346 0 1559 154 113 18 chr10 5992342 5992679 -134324086 + L1MB8 LINE L1 5800 6168 -10 21 0 0 0 chr10 5992681 5992702 -134324063 + AT_rich Low_complexity Low_complexity 1 21 0 416 235 114 8 chr10 5993129 5993261 -134323504 - MIR SINE MIR -12 250 105 855 130 0 71 chr10 5993854 5994008 -134322757 - FLAM_C SINE Alu 0 143 1 1594 212 0 0 chr10 5998922 5999233 -134317532 + AluJb SINE Alu 1 311 -1 620 152 18 30 chr10 5999233 5999398 -134317367 + GA-rich Low_complexity Low_complexity 1 163 0 282 259 12 25 chr10 6000046 6000127 -134316638 + MLT1L LTR MaLR 7 86 -529 441 0 0 0 chr10 6000148 6000197 -134316568 + (TG)n Simple_repeat Simple_repeat 1 49 0 553 235 29 7 chr10 6000264 6000400 -134316365 + MLT1L LTR MaLR 129 267 -348 376 232 173 36 chr10 6000467 6000642 -134316123 + MLT1L LTR MaLR 296 611 -4 2063 132 0 3 chr10 6000897 6001192 -134315573 - AluSx SINE Alu -18 294 1 275 277 131 58 chr10 6001210 6001470 -134315295 - HAL1 LINE L1 -377 2130 1852 2787 195 133 36 chr10 6001518 6002915 -134313850 + L1ME2 LINE L1 4567 6155 -9 741 346 97 67 chr10 6003099 6003670 -134313095 + L1M4 LINE L1 2933 3486 -2660 2025 120 0 10 chr10 6003670 6003969 -134312796 - AluSx SINE Alu -11 301 6 741 346 97 67 chr10 6003969 6004228 -134312537 + L1M4 LINE L1 3486 3736 -2410 2566 30 10 0 chr10 6004228 6004526 -134312239 + AluY SINE Alu 1 301 -10 741 346 97 67 chr10 6004526 6004870 -134311895 + L1M4 LINE L1 3736 4143 -2003 409 248 223 45 chr10 6004892 6005251 -134311514 - HAL1b LINE L1 -702 646 224 234 0 0 0 chr10 6005368 6005394 -134311371 + (A)n Simple_repeat Simple_repeat 1 26 0 9703 149 36 24 chr10 6005404 6007185 -134309580 + L1MA4 LINE L1 3472 5321 -979 234 62 0 0 chr10 6007185 6007217 -134309548 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 9703 149 36 24 chr10 6007217 6008207 -134308558 + L1MA4 LINE L1 5321 6298 -2 3516 174 20 36 chr10 6008501 6009250 -134307515 - L1MB8 LINE L1 0 6178 5442 22 35 0 0 chr10 6009250 6009279 -134307486 + AT_rich Low_complexity Low_complexity 1 29 0 840 224 97 0 chr10 6009310 6009506 -134307259 - MER58A DNA MER1_type -4 220 6 591 270 70 62 chr10 6009603 6009956 -134306809 - MLT1H LTR MaLR -4 545 72 601 136 9 9 chr10 6010002 6010112 -134306653 + L1MB7 LINE L1 6058 6167 -17 1776 278 149 47 chr10 6010904 6011375 -134305390 - HAL1 LINE L1 -1139 1368 947 1842 159 10 3 chr10 6011375 6011671 -134305094 + AluJo SINE Alu 1 298 -14 1776 278 149 47 chr10 6011671 6012396 -134304369 - HAL1 LINE L1 -1560 947 49 375 276 36 66 chr10 6012688 6012884 -134303881 + L2 LINE L2 3124 3313 0 480 297 62 15 chr10 6012901 6013174 -134303591 + L1 LINE L1 3587 3872 -2274 535 234 131 11 chr10 6013504 6013679 -134303086 + L2 LINE L2 3118 3313 0 441 354 103 37 chr10 6013691 6014213 -134302552 + L2 LINE L2 2713 3263 -9 21 0 0 0 chr10 6015235 6015256 -134301509 + GC_rich Low_complexity Low_complexity 1 21 0 1634 145 104 0 chr10 6015865 6016134 -134300631 - AluSx SINE Alu -15 297 1 2313 87 3 3 chr10 6016821 6017119 -134299646 - AluSc SINE Alu -11 298 1 376 276 99 29 chr10 6017777 6018020 -134298745 + L1M4 LINE L1 3135 3394 -2752 23 54 0 0 chr10 6018273 6018310 -134298455 + AT_rich Low_complexity Low_complexity 1 37 0 591 244 119 54 chr10 6018354 6018415 -134298350 + L1MC/D LINE L1 1331 1387 -4869 2364 81 0 0 chr10 6018415 6018710 -134298055 - AluSg SINE Alu -15 295 1 591 244 119 54 chr10 6018710 6019000 -134297765 + L1MC/D LINE L1 1387 1705 -4551 1602 180 14 0 chr10 6019027 6019305 -134297460 - AluJo SINE Alu -30 282 1 2372 166 127 50 chr10 6019306 6019516 -134297249 + Charlie1 DNA MER1_type 2049 2241 -520 1454 156 20 60 chr10 6019516 6019817 -134296948 + AluJo SINE Alu 24 312 0 2372 166 127 50 chr10 6019817 6020208 -134296557 + Charlie1 DNA MER1_type 2241 2708 -53 1900 130 7 0 chr10 6020208 6020492 -134296273 - AluSx SINE Alu -26 286 1 2372 166 127 50 chr10 6020492 6020550 -134296215 + Charlie1 DNA MER1_type 2708 2760 -1 340 231 134 8 chr10 6020551 6020685 -134296080 + L1ME3A LINE L1 5825 5975 -195 407 242 173 60 chr10 6020938 6021186 -134295579 + L1MC/D LINE L1 4554 4829 -1386 * 518 297 144 57 chr10 6021154 6021625 -134295140 + L1MC/D LINE L1 5351 5862 -2015 4014 118 92 18 chr10 6023757 6024488 -134292277 - Tigger3(Golem) DNA MER2_type -2 3027 2243 1258 182 19 0 chr10 6024521 6024730 -134292035 - Tigger3(Golem) DNA MER2_type -2816 213 1 562 316 81 42 chr10 6024801 6025231 -134291534 - L2 LINE L2 0 3313 2867 1064 233 124 78 chr10 6025233 6025770 -134290995 - L1ME3A LINE L1 -15 6155 5593 427 209 234 13 chr10 6026174 6026332 -134290433 - L1ME3A LINE L1 -551 5611 5419 2004 109 0 39 chr10 6026379 6026690 -134290075 - AluSq SINE Alu -14 299 1 3256 213 81 48 chr10 6026693 6027890 -134288875 - L1ME3A LINE L1 -1468 4678 3442 814 234 21 0 chr10 6027894 6028184 -134288581 + L1M4b LINE L1 1140 1509 -5350 190 167 119 24 chr10 6028253 6028295 -134288470 + MIR3 SINE MIR 109 154 -54 368 222 123 70 chr10 6028369 6028540 -134288225 - HAL1 LINE L1 -37 2470 2291 799 118 0 9 chr10 6028562 6028672 -134288093 - FLAM_C SINE Alu -25 118 10 243 278 119 16 chr10 6028679 6028805 -134287960 - HAL1 LINE L1 -200 2307 2169 192 97 0 0 chr10 6028928 6028959 -134287806 + (CA)n Simple_repeat Simple_repeat 1 31 0 1003 265 92 12 chr10 6029222 6029547 -134287218 + LTR16B LTR ERVL 114 464 0 320 313 23 16 chr10 6029553 6029681 -134287084 + HERV16 LTR ERVL 6 134 -4862 445 329 50 23 chr10 6030470 6030771 -134285994 + HERV16 LTR ERVL 4688 4996 0 1119 303 59 11 chr10 6030771 6031214 -134285551 + LTR16B LTR ERVL 1 464 0 207 288 50 0 chr10 6031256 6031336 -134285429 + MER5A DNA MER1_type 8 91 -98 1629 145 0 0 chr10 6031338 6031587 -134285178 - AluSx SINE Alu -14 298 50 819 167 18 18 chr10 6031796 6031964 -134284801 + L1 LINE L1 4549 4716 -1430 1657 144 0 62 chr10 6031966 6032271 -134284494 + AluJb SINE Alu 14 299 -13 1980 113 50 0 chr10 6032273 6032556 -134284209 + AluSc SINE Alu 1 297 -12 661 156 16 0 chr10 6032556 6032684 -134284081 + L1MA5 LINE L1 6171 6300 0 898 58 0 17 chr10 6032843 6032987 -134283778 - AluY SINE Alu 0 311 171 925 280 8 23 chr10 6033037 6033294 -134283471 + MIR SINE MIR 4 256 -6 620 186 114 41 chr10 6033315 6033543 -134283222 + L1MC5 LINE L1 7259 7415 -393 896 173 11 32 chr10 6033571 6033623 -134283142 + FAM SINE Alu 1 4294967213 -268 1946 95 206 46 chr10 6033623 6033944 -134282821 + MSTA LTR MaLR 1 390 -38 2291 63 0 35 chr10 6033944 6034259 -134282506 - AluY SINE Alu -7 304 1 1946 95 206 46 chr10 6034259 6034306 -134282459 + MSTA LTR MaLR 390 428 0 896 173 11 32 chr10 6034306 6034438 -134282327 + FAM SINE Alu -84 49 0 571 219 26 0 chr10 6034473 6034624 -134282141 + L1M4 LINE L1 2231 2385 -3761 26 93 0 0 chr10 6034629 6034704 -134282061 + AT_rich Low_complexity Low_complexity 1 75 0 1969 248 38 16 chr10 6034721 6035351 -134281414 + L1M4 LINE L1 2371 3014 -3132 295 287 59 20 chr10 6035368 6035469 -134281296 - MLT2F LTR ERVL -284 379 275 4027 267 109 55 chr10 6035513 6036163 -134280602 - ERVL LTR ERVL -2715 3049 2435 2186 83 0 0 chr10 6036163 6036452 -134280313 - AluSc SINE Alu 0 309 21 4027 267 109 55 chr10 6036452 6037485 -134279280 - ERVL LTR ERVL -3329 2435 1276 933 309 28 32 chr10 6037586 6038279 -134278486 - ERVL LTR ERVL -4646 1118 352 639 154 106 24 chr10 6038410 6038533 -134278232 - FLAM_A SINE Alu 0 133 1 1236 149 0 14 chr10 6039121 6039335 -134277430 + AluSg/x SINE Alu 94 304 -8 183 222 0 0 chr10 6039870 6039915 -134276850 + (CATA)n Simple_repeat Simple_repeat 4 48 0 25 0 0 0 chr10 6040489 6040514 -134276251 + AT_rich Low_complexity Low_complexity 1 25 0 240 195 35 46 chr10 6041312 6041399 -134275366 + (CCCGG)n Simple_repeat Simple_repeat 5 90 0 2005 136 0 0 chr10 6041686 6041987 -134274778 - AluSx SINE Alu -10 302 2 1993 227 203 14 chr10 6041998 6042239 -134274526 - L1MD3 LINE L1 0 8039 7845 1928 146 0 3 chr10 6042239 6042541 -134274224 - AluJb SINE Alu -11 301 1 1993 227 203 14 chr10 6042541 6043106 -134273659 - L1MD3 LINE L1 -194 7845 7077 2174 107 3 7 chr10 6045071 6045379 -134271386 + AluSc SINE Alu 1 307 -2 2195 77 0 42 chr10 6045934 6046247 -134270518 - AluSq SINE Alu -13 300 1 23 0 0 0 chr10 6046304 6046327 -134270438 + AT_rich Low_complexity Low_complexity 1 23 0 186 254 16 48 chr10 6046504 6046567 -134270198 - L2 LINE L2 -1065 2249 2189 198 326 45 45 chr10 6047106 6047195 -134269570 - L2 LINE L2 -661 2653 2565 237 167 0 0 chr10 6047767 6047821 -134268944 + (TA)n Simple_repeat Simple_repeat 2 55 0 1488 156 0 0 chr10 6047843 6048080 -134268685 - AluSx SINE Alu -75 237 1 336 185 62 0 chr10 6048296 6048377 -134268388 + L1M4 LINE L1 5606 5691 -493 2106 122 0 0 chr10 6049615 6049918 -134266847 + AluSq SINE Alu 7 309 -4 1074 126 0 0 chr10 6049918 6050106 -134266659 + AluSg/x SINE Alu 132 319 0 454 271 99 48 chr10 6050109 6050401 -134266364 - HAL1 LINE L1 -218 2289 1983 213 277 0 15 chr10 6051522 6051587 -134265178 + CT-rich Low_complexity Low_complexity 4 67 0 235 274 59 39 chr10 6051976 6052078 -134264687 - HAL1 LINE L1 -2369 138 35 324 158 0 0 chr10 6052177 6052234 -134264531 + C-rich Low_complexity Low_complexity 5 61 0 1971 96 3 41 chr10 6052238 6052529 -134264236 - AluSx SINE Alu -32 280 1 1978 116 10 13 chr10 6052968 6053279 -134263486 + AluJb SINE Alu 1 310 -2 245 211 0 0 chr10 6053751 6053803 -134262962 + MER63 DNA MER1_type 696 747 -89 4327 148 81 44 chr10 6056102 6056394 -134260371 - L1MB2 LINE L1 -2 6169 5889 1496 134 181 0 chr10 6056394 6056648 -134260117 - AluSg SINE Alu 0 300 1 4327 148 81 44 chr10 6056648 6056660 -134260105 - L1MB2 LINE L1 -282 5889 5879 1933 113 3 36 chr10 6056660 6056969 -134259796 - AluSx SINE Alu -13 299 1 4327 148 81 44 chr10 6056969 6057636 -134259129 - L1MB2 LINE L1 -292 5879 5157 1295 222 68 20 chr10 6057800 6058151 -134258614 - MER87 LTR ERV1 0 541 174 2211 77 0 3 chr10 6058280 6058567 -134258198 - AluSg SINE Alu -14 296 11 217 234 11 117 chr10 6058609 6058703 -134258062 - L2 LINE L2 0 3272 3189 571 276 81 57 chr10 6059357 6059603 -134257162 - MIR SINE MIR -3 259 8 2067 109 0 16 chr10 6059716 6060020 -134256745 - AluSq SINE Alu -14 299 1 192 77 0 0 chr10 6060674 6060700 -134256065 + (A)n Simple_repeat Simple_repeat 1 26 0 1166 210 12 12 chr10 6060702 6060853 -134255912 + L1 LINE L1 4015 4169 -1977 2159 96 0 0 chr10 6060853 6061177 -134255588 + AluSx SINE Alu 1 324 0 1166 210 12 12 chr10 6061177 6061267 -134255498 + L1 LINE L1 4168 4257 -1889 284 244 167 40 chr10 6062324 6062513 -134254252 + MER63 DNA MER1_type 1 1688 0 324 0 0 0 chr10 6062772 6062808 -134253957 + (TG)n Simple_repeat Simple_repeat 1 36 0 2046 134 3 0 chr10 6062912 6063217 -134253548 - AluJb SINE Alu -6 306 1 2008 112 7 17 chr10 6065110 6065406 -134251359 + AluSx SINE Alu 1 293 -19 325 335 0 0 chr10 6066345 6066524 -134250241 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 338 335 0 0 chr10 6066696 6066875 -134249890 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 302 328 0 0 chr10 6066801 6066972 -134249793 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 192 311 283 17 chr10 6067121 6067301 -134249464 + MIR SINE MIR 35 262 0 743 176 8 0 chr10 6067681 6067812 -134248953 + FLAM_C SINE Alu 2 133 -10 354 278 51 77 chr10 6068205 6068478 -134248287 - MLT1K LTR MaLR 0 588 323 68 24 0 0 chr10 6069617 6069699 -134247066 + AT_rich Low_complexity Low_complexity 1 82 0 237 109 47 31 chr10 6069937 6070001 -134246764 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2252 122 0 0 chr10 6070100 6070403 -134246362 - AluSx SINE Alu -9 303 1 1701 159 7 11 chr10 6070449 6070726 -134246039 - AluJb SINE Alu -36 276 1 1724 86 9 0 chr10 6072063 6072285 -134244480 + AluSg/x SINE Alu 68 291 -19 27 0 0 0 chr10 6072341 6072368 -134244397 + AT_rich Low_complexity Low_complexity 1 27 0 2151 97 0 72 chr10 6073542 6073862 -134242903 + AluSx SINE Alu 6 302 -10 445 103 0 0 chr10 6075493 6075551 -134241214 + AluSq/x SINE Alu 62 119 -194 2441 70 0 19 chr10 6076510 6076822 -134239943 - AluY SINE Alu -5 306 1 1916 163 7 0 chr10 6076869 6077169 -134239596 + AluSx SINE Alu 1 302 -10 471 283 60 57 chr10 6077356 6077443 -134239322 + L1ME3A LINE L1 5209 5294 -876 749 172 31 0 chr10 6077443 6077571 -134239194 + FLAM_C SINE Alu 1 132 -1 471 283 60 57 chr10 6077571 6078152 -134238613 + L1ME3A LINE L1 5294 5891 -279 1008 98 0 0 chr10 6078341 6078474 -134238291 + FLAM_C SINE Alu 1 133 0 1445 177 58 50 chr10 6080177 6080332 -134236433 + MLT1A1 LTR MaLR 1 153 -212 2093 130 3 0 chr10 6080332 6080625 -134236140 + AluSq SINE Alu 1 294 -19 1445 177 58 50 chr10 6080625 6080791 -134235974 + MLT1A1 LTR MaLR 153 328 -37 1465 182 91 0 chr10 6080791 6081066 -134235699 - AluJo SINE Alu -12 300 1 1445 177 58 50 chr10 6081066 6081105 -134235660 + MLT1A1 LTR MaLR 328 365 0 358 177 54 11 chr10 6083024 6083126 -134233639 + (TCTA)n Simple_repeat Simple_repeat 1 97 -480 1844 170 0 0 chr10 6083126 6083414 -134233351 - 7SLRNA srpRNA srpRNA -12 308 21 358 177 54 11 chr10 6083414 6083578 -134233187 + (TCTA)n Simple_repeat Simple_repeat 97 577 0 1682 173 46 41 chr10 6084283 6084671 -134232094 - MLT1B LTR MaLR 0 390 1 297 0 0 0 chr10 6085094 6085127 -134231638 + (T)n Simple_repeat Simple_repeat 1 33 0 774 256 50 6 chr10 6085197 6085377 -134231388 - MER58A DNA MER1_type -33 191 4 355 240 0 13 chr10 6085433 6085508 -134231257 - MLT1J LTR MaLR -202 309 236 1428 244 35 32 chr10 6086719 6087092 -134229673 + MLT1B LTR MaLR 1 374 -16 1726 187 3 7 chr10 6087179 6087478 -134229287 - AluJo SINE Alu -13 299 2 2588 50 0 3 chr10 6087574 6087875 -134228890 + AluY SINE Alu 1 300 -11 199 311 33 16 chr10 6088178 6088300 -134228465 + L2 LINE L2 3143 3266 -6 989 182 56 33 chr10 6088800 6088837 -134227928 + MER58A DNA MER1_type 1 36 -2384 2184 113 0 0 chr10 6088837 6089177 -134227588 - AluSq SINE Alu 0 342 3 989 182 56 33 chr10 6089177 6089352 -134227413 + MER58A DNA MER1_type 36 219 -5 2297 116 0 0 chr10 6089426 6089719 -134227046 - AluSx SINE Alu -19 293 1 3103 277 71 12 chr10 6089783 6091070 -134225695 + L1MEc LINE L1 1122 2483 -3913 450 250 127 26 chr10 6091070 6091157 -134225608 + L1M4 LINE L1 4204 4281 -1865 717 45 0 0 chr10 6091157 6091246 -134225519 + (TA)n Simple_repeat Simple_repeat 1 89 0 450 250 127 26 chr10 6091246 6091426 -134225339 + L1M4 LINE L1 4281 4498 -1648 6367 52 3 1 chr10 6091543 6092327 -134224438 + L1PA3 LINE L1 5371 6155 0 180 77 0 0 chr10 6092337 6092363 -134224402 + (A)n Simple_repeat Simple_repeat 1 26 0 1109 166 4 4 chr10 6092363 6093723 -134223042 - ALR/Alpha Satellite centromeric 0 1360 1 2195 113 0 0 chr10 6093907 6094217 -134222548 - AluSx SINE Alu 0 310 1 22 35 0 0 chr10 6094320 6094349 -134222416 + AT_rich Low_complexity Low_complexity 1 29 0 721 163 8 16 chr10 6094607 6094730 -134222035 - FLAM_C SINE Alu -10 123 2 773 266 55 44 chr10 6094928 6095203 -134221562 + MLT1J LTR MaLR 200 477 -34 858 126 0 15 chr10 6095227 6095362 -134221403 - FLAM_C SINE Alu 0 133 1 859 209 6 17 chr10 6096082 6096254 -134220511 - MER45A DNA AcHobo -8 170 1 516 219 116 0 chr10 6096262 6096585 -134220180 + L1MCc LINE L1 1198 1571 -4851 373 167 154 0 chr10 6096589 6096667 -134220098 + MLT1B LTR MaLR 1 90 -300 3613 226 46 82 chr10 6096683 6097905 -134218860 + L1MCc LINE L1 1732 2808 -4133 2145 151 0 0 chr10 6097905 6098217 -134218548 + AluSx SINE Alu 1 312 0 3613 226 46 82 chr10 6098217 6099411 -134217354 + L1MCc LINE L1 2808 4043 -2898 607 188 257 10 chr10 6099582 6099732 -134217033 - MER69 DNA AcHobo -92 2434 2322 1793 160 0 53 chr10 6099732 6100052 -134216713 - AluSx SINE Alu 0 304 1 607 188 257 10 chr10 6100052 6100102 -134216663 - MER69 DNA AcHobo -204 2322 2183 453 258 113 32 chr10 6100649 6100835 -134215930 + LTR33A LTR ERVL 297 497 -26 2061 138 10 0 chr10 6100841 6101132 -134215633 - AluSx SINE Alu -18 294 1 273 216 69 78 chr10 6102246 6102348 -134214417 + HsTC2 DNA Tc2 1793 1893 -5 1011 235 81 59 chr10 6102396 6102721 -134214044 - L1ME2 LINE L1 -63 6101 5764 1987 152 0 26 chr10 6102721 6103023 -134213742 + AluSx SINE Alu 1 294 -18 1011 235 81 59 chr10 6103023 6103105 -134213660 - L1ME2 LINE L1 -400 5764 5685 291 93 0 0 chr10 6103105 6103148 -134213617 + (TA)n Simple_repeat Simple_repeat 1 43 0 2139 125 20 0 chr10 6103329 6103633 -134213132 - AluSx SINE Alu -2 310 1 412 179 12 0 chr10 6103674 6103758 -134213007 + L1PA16 LINE L1 6080 6164 -2 414 0 0 0 chr10 6105480 6105526 -134211239 + (TG)n Simple_repeat Simple_repeat 2 47 0 225 0 0 0 chr10 6105577 6105602 -134211163 + (TG)n Simple_repeat Simple_repeat 2 26 0 297 0 0 0 chr10 6105664 6105697 -134211068 + (TG)n Simple_repeat Simple_repeat 2 34 0 384 22 0 0 chr10 6105746 6105791 -134210974 + (TG)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr10 6105853 6105888 -134210877 + (TG)n Simple_repeat Simple_repeat 2 36 0 429 20 0 0 chr10 6105937 6105987 -134210778 + (TG)n Simple_repeat Simple_repeat 1 50 0 227 190 52 0 chr10 6106121 6106179 -134210586 - LTR33A LTR ERVL -4 519 459 421 232 62 9 chr10 6106185 6106297 -134210468 - L1MA10 LINE L1 -7 6327 6210 379 225 15 36 chr10 6106295 6106405 -134210360 - L1ME1 LINE L1 -148 6016 5894 * 1069 202 50 60 chr10 6106410 6106464 -134210301 - MLT1C LTR MaLR -183 284 231 1726 177 3 10 chr10 6106464 6106763 -134210002 + AluSx SINE Alu 1 297 -15 1069 202 50 60 chr10 6106763 6106990 -134209775 - MLT1C LTR MaLR -236 231 6 780 228 95 30 chr10 6107007 6107200 -134209565 - L1MCa LINE L1 -4678 1929 1713 2151 135 3 0 chr10 6107200 6107497 -134209268 - AluSx SINE Alu -14 298 1 780 228 95 30 chr10 6107497 6107566 -134209199 - L1MCa LINE L1 -4894 1713 1650 261 301 126 79 chr10 6107568 6107910 -134208855 + MLT1K LTR MaLR 134 491 -97 1897 171 14 26 chr10 6107953 6108181 -134208584 - MER7A DNA MER2_type -2692 346 123 1984 133 7 0 chr10 6108181 6108484 -134208281 - AluSx SINE Alu 0 305 1 1897 171 14 26 chr10 6108484 6108605 -134208160 - MER7A DNA MER2_type -2915 123 2 324 61 0 61 chr10 6109175 6109224 -134207541 - MSTB1 LTR MaLR 0 457 412 1112 73 11 17 chr10 6109224 6109403 -134207362 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 219 69 0 0 chr10 6109423 6109452 -134207313 + (TC)n Simple_repeat Simple_repeat 1 29 0 1185 82 19 0 chr10 6109452 6109610 -134207155 - AluSc SINE Alu -15 294 134 2000 175 34 11 chr10 6109611 6109984 -134206781 - MSTB1 LTR MaLR -38 394 10 4321 85 2 0 chr10 6109984 6110537 -134206228 + MER41A LTR ERV1 1 554 0 937 281 82 24 chr10 6110641 6110894 -134205871 - MLT1J LTR MaLR -70 441 153 5234 120 24 31 chr10 6110894 6111772 -134204993 + MER4D LTR ERV1 1 872 0 937 281 82 24 chr10 6111772 6111935 -134204830 - MLT1J LTR MaLR -358 153 1 3263 191 20 30 chr10 6111949 6112648 -134204117 - L1MCa LINE L1 -4972 935 466 1319 162 199 39 chr10 6112648 6113036 -134203729 + LTR7 LTR ERV1 1 450 0 3263 191 20 30 chr10 6113036 6113416 -134203349 - L1MCa LINE L1 -5441 466 84 2642 177 107 35 chr10 6113820 6114182 -134202583 - L1MB5 LINE L1 -1 6163 5829 2101 112 3 32 chr10 6114182 6114495 -134202270 - AluSx SINE Alu -8 304 1 2642 177 107 35 chr10 6114495 6114858 -134201907 - L1MB5 LINE L1 -335 5829 5366 350 175 6 129 chr10 6114884 6114910 -134201855 - Charlie1 DNA MER1_type -39 2722 2694 2310 106 6 0 chr10 6114910 6115221 -134201544 + AluSq SINE Alu 1 313 0 350 175 6 129 chr10 6115221 6115365 -134201400 - Charlie1 DNA MER1_type -67 2694 2573 * 654 233 15 0 chr10 6115363 6115496 -134201269 - Charlie1 DNA MER1_type -2570 191 57 671 225 40 12 chr10 6115951 6116124 -134200641 + MER5A DNA MER1_type 1 178 -11 1883 154 7 0 chr10 6116163 6116455 -134200310 - AluJo SINE Alu -18 294 1 213 196 43 0 chr10 6116494 6116540 -134200225 + CT-rich Low_complexity Low_complexity 3 50 0 1245 103 0 0 chr10 6117587 6117742 -134199023 - AluSg SINE Alu -155 155 1 1049 140 45 30 chr10 6117842 6118042 -134198723 + MER3 DNA MER1_type 1 203 -6 1728 197 64 33 chr10 6118138 6118447 -134198318 + MER63B DNA MER1_type 1 328 -734 1578 185 49 3 chr10 6118447 6118733 -134198032 - AluJo SINE Alu -13 299 1 1728 197 64 33 chr10 6118733 6118844 -134197921 + MER63B DNA MER1_type 328 434 -2 2203 124 0 0 chr10 6119695 6119994 -134196771 - AluSx SINE Alu 0 312 14 775 201 13 0 chr10 6120033 6120192 -134196573 + MER5A DNA MER1_type 1 161 -28 237 211 0 7 chr10 6120192 6120203 -134196562 + MER5A DNA MER1_type 137 147 -42 840 127 0 8 chr10 6120203 6120337 -134196428 - L1MA5A LINE L1 -5 6292 6160 237 211 0 7 chr10 6120337 6120380 -134196385 + MER5A DNA MER1_type 147 189 0 204 228 0 70 chr10 6120391 6120448 -134196317 - MER5B DNA MER1_type -4 174 122 1130 173 138 27 chr10 6120455 6120658 -134196107 + L1MB5 LINE L1 5886 6126 -48 1735 158 69 91 chr10 6120658 6121063 -134195702 + MSTD LTR MaLR 1 396 0 1130 173 138 27 chr10 6121063 6121119 -134195646 + L1MB5 LINE L1 6126 6174 0 186 167 28 0 chr10 6121123 6121159 -134195606 - MER5B DNA MER1_type -54 124 88 2142 90 3 3 chr10 6121186 6121476 -134195289 - AluSq SINE Alu -12 301 12 2088 115 0 7 chr10 6122187 6122491 -134194274 - AluSx SINE Alu -9 303 2 798 172 0 0 chr10 6123446 6123987 -134192778 + (CCAA)n Simple_repeat Simple_repeat 1 541 0 2246 76 14 0 chr10 6125157 6125447 -134191318 - AluSq SINE Alu -19 294 1 210 143 0 0 chr10 6125543 6125578 -134191187 + (TG)n Simple_repeat Simple_repeat 1 35 0 234 242 12 121 chr10 6125891 6126047 -134190718 - MIR3 SINE MIR -28 180 40 183 302 16 0 chr10 6126422 6126485 -134190280 - L2 LINE L2 0 3313 3250 287 292 144 26 chr10 6127686 6127844 -134188921 + MIR SINE MIR 43 212 -50 1975 127 3 19 chr10 6127935 6128250 -134188515 - AluSx SINE Alu -2 310 1 188 289 103 21 chr10 6129035 6129132 -134187633 - L2 LINE L2 0 3313 3209 180 188 0 59 chr10 6129193 6129294 -134187471 + (TATG)n Simple_repeat Simple_repeat 4 98 0 1015 146 0 12 chr10 6129565 6129729 -134187036 + AluJb SINE Alu 1 162 -150 1581 146 8 0 chr10 6129729 6129982 -134186783 + AluSx SINE Alu 44 298 -14 2099 114 0 7 chr10 6129988 6130287 -134186478 + AluSx SINE Alu 1 297 -15 2014 114 0 14 chr10 6131654 6131951 -134184814 + AluSx SINE Alu 1 293 -19 215 339 148 17 chr10 6132102 6132314 -134184451 + MIR3 SINE MIR 15 256 -6 571 265 38 25 chr10 6132549 6132787 -134183978 + L1ME2 LINE L1 34 274 -6122 354 243 46 99 chr10 6133097 6133334 -134183431 + L1ME2 LINE L1 660 879 -5517 1729 129 42 17 chr10 6133334 6133621 -134183144 + AluSx SINE Alu 5 298 -14 354 243 46 99 chr10 6133621 6133687 -134183078 + L1ME2 LINE L1 879 947 -5449 1426 233 88 67 chr10 6133865 6134342 -134182423 + L1ME2 LINE L1 4794 5296 -937 2350 77 0 3 chr10 6134342 6134653 -134182112 + AluY SINE Alu 1 310 -1 1426 233 88 67 chr10 6134653 6135022 -134181743 + L1ME2 LINE L1 5296 5656 -577 662 143 0 4 chr10 6135026 6135250 -134181515 + AluSx SINE Alu 1 308 -2 1037 254 38 38 chr10 6135275 6135745 -134181020 + L1ME2 LINE L1 5654 6091 -142 361 220 13 0 chr10 6135754 6135842 -134180923 + L1ME2 LINE L1 6144 6223 -10 209 266 101 13 chr10 6138163 6138242 -134178523 - MIR SINE MIR -103 105 20 246 322 44 0 chr10 6138850 6138940 -134177825 - MER5A DNA MER1_type -87 102 9 591 232 137 42 chr10 6139961 6140129 -134176636 - MIR3 SINE MIR -5 203 20 554 272 125 0 chr10 6140325 6140509 -134176256 - MIR SINE MIR 0 262 56 465 263 90 75 chr10 6140911 6141497 -134175268 + L1M4 LINE L1 2128 2722 -3424 462 338 61 19 chr10 6142702 6142915 -134173850 + L1M4 LINE L1 4166 4387 -1759 2288 70 10 3 chr10 6143045 6143346 -134173419 - AluY SINE Alu -8 303 1 420 269 82 68 chr10 6143369 6143608 -134173157 + L1ME3A LINE L1 2371 2614 -3926 225 264 81 34 chr10 6143639 6143787 -134172978 + L1ME3A LINE L1 2628 2782 -3758 428 309 77 47 chr10 6144060 6144555 -134172210 + L1ME3A LINE L1 4139 4648 -1892 * 868 277 79 38 chr10 6144551 6145235 -134171530 + L1ME3A LINE L1 5632 6337 -227 2042 132 3 0 chr10 6145358 6145668 -134171097 - AluSx SINE Alu 0 312 2 28 0 0 0 chr10 6145794 6145822 -134170943 + AT_rich Low_complexity Low_complexity 1 28 0 2422 175 24 37 chr10 6146107 6146599 -134170166 - MER66B LTR ERV1 0 486 1 367 259 54 9 chr10 6148744 6148856 -134167909 + Charlie8 DNA MER1_type 1090 1206 -1211 189 292 62 0 chr10 6148952 6149000 -134167765 - MIR3 SINE MIR -1 207 157 34 24 0 0 chr10 6149583 6149624 -134167141 + AT_rich Low_complexity Low_complexity 1 41 0 268 173 27 55 chr10 6149693 6149803 -134166962 + (TATAA)n Simple_repeat Simple_repeat 5 111 0 618 263 26 7 chr10 6149831 6149983 -134166782 - MIR SINE MIR -94 168 14 354 280 92 48 chr10 6150118 6150389 -134166376 - L2 LINE L2 -734 2580 2298 319 321 136 0 chr10 6150430 6150570 -134166195 - MIR SINE MIR -11 251 93 2667 149 22 65 chr10 6150911 6151447 -134165318 - MLT2B2 LTR ERVL 0 515 3 290 262 78 10 chr10 6152180 6152283 -134164482 + MIR SINE MIR 38 147 -115 1965 101 7 30 chr10 6152286 6152583 -134164182 + AluSx SINE Alu 1 290 -22 216 0 0 0 chr10 6153427 6153451 -134163314 + (TA)n Simple_repeat Simple_repeat 2 25 0 2199 84 7 3 chr10 6153451 6153750 -134163015 - AluSx SINE Alu -11 301 2 234 0 0 0 chr10 6153750 6153776 -134162989 + (TA)n Simple_repeat Simple_repeat 1 26 0 395 213 117 0 chr10 6154316 6154410 -134162355 + L2 LINE L2 3168 3272 0 372 330 92 42 chr10 6155100 6155339 -134161426 + MIR SINE MIR 2 252 -10 23 33 0 0 chr10 6155579 6155609 -134161156 + AT_rich Low_complexity Low_complexity 1 30 0 815 128 0 0 chr10 6155609 6155726 -134161039 - FLAM_C SINE Alu -15 118 2 826 163 0 15 chr10 6156794 6156929 -134159836 - FLAM_C SINE Alu 0 133 1 299 269 186 26 chr10 6157006 6157162 -134159603 + MER5A DNA MER1_type 9 189 0 354 349 34 34 chr10 6157229 6157404 -134159361 - MER5B DNA MER1_type -2 176 2 194 342 53 13 chr10 6157646 6157722 -134159043 + L2 LINE L2 3132 3210 -62 1635 164 10 7 chr10 6157904 6158197 -134158568 + AluSx SINE Alu 1 294 -18 299 244 61 0 chr10 6158917 6158999 -134157766 - MIR3 SINE MIR 0 208 122 2255 95 0 3 chr10 6159278 6159582 -134157183 + AluSx SINE Alu 1 303 -9 184 293 338 6 chr10 6160751 6160908 -134155857 + MIR SINE MIR 48 256 -6 239 327 243 22 chr10 6161109 6161381 -134155384 + L2 LINE L2 2878 3209 -63 753 146 8 0 chr10 6161660 6161783 -134154982 + L1PB1 LINE L1 5957 6080 -71 872 81 16 0 chr10 6161783 6161903 -134154862 + L1PB1 LINE L1 6023 6148 -3 2058 129 0 7 chr10 6161909 6162218 -134154547 + AluSg SINE Alu 1 307 -3 1600 154 35 3 chr10 6162541 6162826 -134153939 + AluJb SINE Alu 1 294 -18 225 208 21 0 chr10 6162867 6162915 -134153850 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr10 6163841 6163862 -134152903 + (T)n Simple_repeat Simple_repeat 1 21 0 825 142 0 8 chr10 6164620 6164754 -134152011 + AluSq/x SINE Alu 1 133 -180 21 0 0 0 chr10 6164754 6164775 -134151990 + AT_rich Low_complexity Low_complexity 1 21 0 2065 107 0 3 chr10 6164775 6165064 -134151701 + AluSx SINE Alu 1 288 -24 26 64 0 0 chr10 6165276 6165323 -134151442 + AT_rich Low_complexity Low_complexity 1 47 0 1741 102 8 0 chr10 6165323 6165559 -134151206 - AluSx SINE Alu -59 253 16 4196 78 18 12 chr10 6166041 6166608 -134150157 - L1PA8A LINE L1 0 6131 5562 201 74 0 0 chr10 6166720 6166747 -134150018 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1493 172 0 12 chr10 6166759 6167015 -134149750 - AluJb SINE Alu -58 254 2 207 0 0 0 chr10 6167321 6167344 -134149421 + (T)n Simple_repeat Simple_repeat 1 23 0 2105 115 0 0 chr10 6168535 6168830 -134147935 + AluSq SINE Alu 1 295 -18 1071 144 0 6 chr10 6169600 6169767 -134146998 + FRAM SINE Alu 1 166 0 2088 104 24 0 chr10 6171610 6171897 -134144868 - AluSx SINE Alu -18 294 1 295 393 13 13 chr10 6172322 6172546 -134144219 - MIR SINE MIR -3 259 36 238 83 0 42 chr10 6173021 6173069 -134143696 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1730 161 7 13 chr10 6173666 6173970 -134142795 + AluJo SINE Alu 1 302 -10 3436 101 12 45 chr10 6174605 6174779 -134141986 - L1MA5A LINE L1 -1 6296 6118 2225 115 0 3 chr10 6174779 6175084 -134141681 - AluSx SINE Alu -3 309 6 3436 101 12 45 chr10 6175084 6175483 -134141282 - L1MA5A LINE L1 -179 6118 5742 1922 137 20 10 chr10 6175558 6175857 -134140908 - AluJb SINE Alu -10 302 1 219 189 0 0 chr10 6175928 6175965 -134140800 - MIR SINE MIR -7 255 219 * 503 267 127 46 chr10 6175933 6176682 -134140083 - L2 LINE L2 -18 3295 2400 186 242 0 16 chr10 6176784 6176846 -134139919 - L2 LINE L2 -1522 1792 1732 981 123 20 27 chr10 6176948 6177094 -134139671 - AluSq/x SINE Alu -167 145 1 455 267 87 20 chr10 6177097 6177247 -134139518 - HERV16 LTR ERVL -3144 1852 1693 * 460 331 138 34 chr10 6177243 6177518 -134139247 + HERV16 LTR ERVL 3612 3857 -1797 1785 145 48 3 chr10 6177518 6177807 -134138958 + AluSq SINE Alu 1 302 -11 460 331 138 34 chr10 6177807 6178059 -134138706 + HERV16 LTR ERVL 3857 4194 -1460 1030 116 0 7 chr10 6178215 6178361 -134138404 + AluSq/x SINE Alu 2 146 -167 535 141 0 0 chr10 6178361 6178439 -134138326 + AluS SINE Alu 223 300 -12 443 254 155 42 chr10 6179124 6179459 -134137306 + LTR16A LTR ERVL 61 433 -17 234 296 0 20 chr10 6179758 6179856 -134136909 + A-rich Low_complexity Low_complexity 2 97 0 1387 167 17 24 chr10 6180047 6180334 -134136431 - AluSx SINE Alu -27 285 1 358 164 41 82 chr10 6180543 6180689 -134136076 + (CACTC)n Simple_repeat Simple_repeat 4 143 0 2226 113 0 0 chr10 6181170 6181475 -134135290 + AluSx SINE Alu 1 305 0 668 298 121 46 chr10 6181566 6181845 -134134920 + HERV16 LTR ERVL 1957 2268 -2728 2240 115 3 0 chr10 6181845 6182150 -134134615 + AluSx SINE Alu 1 306 -6 668 298 121 46 chr10 6182150 6182216 -134134549 + HERV16 LTR ERVL 2268 2328 -2668 1267 265 7 0 chr10 6182227 6182514 -134134251 - MER58B DNA MER1_type -38 303 15 489 313 138 22 chr10 6182531 6182726 -134134039 + HERV16 LTR ERVL 2323 2494 -2502 2036 118 14 0 chr10 6182726 6183034 -134133731 - AluSp SINE Alu 0 312 1 489 313 138 22 chr10 6183034 6183353 -134133412 + HERV16 LTR ERVL 2494 2900 -2096 963 124 7 0 chr10 6183391 6183528 -134133237 - AluSg/x SINE Alu -17 293 156 458 240 71 19 chr10 6183532 6183686 -134133079 - HERV16 LTR ERVL -4682 314 153 272 339 26 0 chr10 6185004 6185119 -134131646 + MIR SINE MIR 133 250 -12 351 279 26 12 chr10 6185285 6185471 -134131294 + MIR SINE MIR 37 228 -34 1840 158 7 7 chr10 6185960 6186244 -134130521 + AluJb SINE Alu 3 286 -26 2223 121 7 0 chr10 6186484 6186790 -134129975 - AluSx SINE Alu -4 308 1 23 0 0 0 chr10 6186935 6186958 -134129807 + AT_rich Low_complexity Low_complexity 1 23 0 2148 114 0 0 chr10 6187143 6187424 -134129341 + AluSq SINE Alu 1 281 -32 947 97 14 0 chr10 6187424 6187568 -134129197 + (GAAA)n Simple_repeat Simple_repeat 1 146 0 2454 63 0 0 chr10 6187601 6187888 -134128877 + AluSq SINE Alu 18 304 -9 470 267 134 54 chr10 6188836 6189296 -134127469 - L1 LINE L1 -2974 3172 2682 381 253 66 62 chr10 6189417 6189674 -134127091 - L1 LINE L1 -3623 2523 2266 285 167 0 0 chr10 6189887 6189941 -134126824 + (TG)n Simple_repeat Simple_repeat 1 54 0 218 183 134 12 chr10 6190651 6190733 -134126032 - SUBTEL_sa Satellite Satellite -72 102 11 180 176 0 0 chr10 6191142 6191176 -134125589 + CT-rich Low_complexity Low_complexity 2 35 0 307 284 23 11 chr10 6192685 6192773 -134123992 - L1MC4 LINE L1 -1340 6702 6614 2101 130 3 0 chr10 6192776 6193069 -134123696 - AluSx SINE Alu -18 294 1 298 267 67 17 chr10 6193370 6193490 -134123275 - L2 LINE L2 -7 3306 3181 2043 120 10 19 chr10 6194921 6195229 -134121536 - AluSx SINE Alu -7 305 1 1737 153 12 41 chr10 6195411 6195679 -134121086 - MER46B DNA MER2_type -2497 234 102 2429 84 0 13 chr10 6195679 6195988 -134120777 - AluY SINE Alu -6 305 1 1737 153 12 41 chr10 6195988 6196059 -134120706 - MER46B DNA MER2_type -2629 102 30 2139 118 7 3 chr10 6196527 6196831 -134119934 - AluSx SINE Alu -7 305 1 1857 82 106 0 chr10 6198734 6199019 -134117746 + AluY SINE Alu 1 312 0 324 190 110 33 chr10 6199486 6199662 -134117103 + MER106A DNA MER1_type 2 231 -5 557 215 75 45 chr10 6199668 6199868 -134116897 + L1MC5 LINE L1 7712 7917 -44 2096 88 95 0 chr10 6199882 6200166 -134116599 - AluY SINE Alu 0 311 1 1295 158 10 5 chr10 6200749 6200958 -134115807 + MER2 DNA MER2_type 1 210 -135 241 261 185 0 chr10 6200985 6201050 -134115715 + MER2 DNA MER2_type 268 344 -1 2209 102 30 0 chr10 6201094 6201389 -134115376 + AluSx SINE Alu 1 304 -8 360 284 97 92 chr10 6201552 6201885 -134114880 + L1MC4 LINE L1 7293 7632 -410 198 71 0 0 chr10 6201885 6201913 -134114852 + (ATG)n Simple_repeat Simple_repeat 1 28 0 360 284 97 92 chr10 6201913 6202217 -134114548 + L1MC4 LINE L1 7632 7933 -109 352 206 78 20 chr10 6203076 6203178 -134113587 - L1ME LINE L1 -305 5816 5709 1768 169 32 0 chr10 6204126 6204410 -134112355 - AluJb SINE Alu -19 293 1 1072 128 199 0 chr10 6206705 6206901 -134109864 + MER46A DNA MER2_type 2 236 0 2042 133 7 3 chr10 6208502 6208796 -134107969 - AluSx SINE Alu -17 295 1 2217 126 7 0 chr10 6208798 6209100 -134107665 - AluSx SINE Alu -8 304 1 191 323 104 0 chr10 6209555 6209651 -134107114 + MIR SINE MIR 108 213 -49 221 351 43 21 chr10 6210550 6210644 -134106121 - L3b LINE CR1 -10 1573 1478 254 245 64 21 chr10 6210759 6210853 -134105912 + MER5B DNA MER1_type 81 178 0 351 286 31 0 chr10 6212137 6212235 -134104530 - MER3 DNA MER1_type -96 113 13 225 0 0 0 chr10 6212265 6212290 -134104475 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 219 228 140 0 chr10 6212693 6212750 -134104015 + MIR SINE MIR 21 85 -123 2265 115 0 0 chr10 6212758 6213054 -134103711 - AluSx SINE Alu -16 296 1 243 286 143 10 chr10 6216410 6216508 -134100257 + L2 LINE L2 3162 3272 0 198 0 0 0 chr10 6217287 6217309 -134099456 + (A)n Simple_repeat Simple_repeat 1 22 0 35 71 0 0 chr10 6218781 6218851 -134097914 + AT_rich Low_complexity Low_complexity 1 70 0 312 204 66 109 chr10 6218886 6218934 -134097831 + LTR67 LTR ERVL 3 52 -505 2451 63 17 0 chr10 6218934 6219236 -134097529 - AluY SINE Alu -4 307 1 312 204 66 109 chr10 6219236 6219324 -134097441 + LTR67 LTR ERVL 52 133 -424 2728 45 0 0 chr10 6219572 6219882 -134096883 - AluY SINE Alu -1 310 1 1666 176 42 3 chr10 6219885 6220169 -134096596 - AluSx SINE Alu -13 299 5 239 202 165 28 chr10 6220367 6220476 -134096289 - AluJb SINE Alu -174 128 5 279 212 45 0 chr10 6220500 6220566 -134096199 + LTR67 LTR ERVL 487 555 -2 335 175 34 3 chr10 6220744 6220814 -134095951 - AluS SINE Alu -243 57 3 2144 93 20 13 chr10 6220838 6221138 -134095627 + AluSx SINE Alu 1 302 -10 2060 199 52 22 chr10 6221138 6221596 -134095169 - L1MC3 LINE L1 -1707 6078 5607 498 309 69 15 chr10 6222022 6222284 -134094481 + L2 LINE L2 2228 2503 -811 319 214 29 19 chr10 6222715 6222818 -134093947 - HAL1 LINE L1 -96 2411 2308 391 328 34 6 chr10 6222898 6223075 -134093690 + HAL1 LINE L1 1712 1893 -614 306 286 31 0 chr10 6223079 6223177 -134093588 + HAL1 LINE L1 2064 2164 -343 1923 108 41 7 chr10 6223324 6223619 -134093146 - AluSx SINE Alu -7 305 1 624 220 38 6 chr10 6223668 6223827 -134092938 - HAL1 LINE L1 -721 1786 1623 1012 138 25 0 chr10 6223828 6223987 -134092778 - FRAM SINE Alu -6 170 8 863 258 156 36 chr10 6223991 6224246 -134092519 - HAL1 LINE L1 -868 1639 1416 2164 112 3 0 chr10 6224246 6224542 -134092223 - AluSx SINE Alu -15 297 1 863 258 156 36 chr10 6224542 6224704 -134092061 - HAL1 LINE L1 -1091 1416 1172 1568 144 0 4 chr10 6224872 6225108 -134091657 - AluJo SINE Alu -77 235 1 207 105 0 26 chr10 6225889 6225927 -134090838 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 733 158 38 15 chr10 6225929 6226062 -134090703 - FLAM_C SINE Alu -2 141 6 1736 116 0 0 chr10 6226117 6226358 -134090407 + AluSx SINE Alu 58 298 -14 216 0 0 0 chr10 6227245 6227269 -134089496 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2309 74 0 10 chr10 6227273 6227582 -134089183 + AluSc SINE Alu 1 306 -3 322 240 94 0 chr10 6228358 6228454 -134088311 + MLT1J LTR MaLR 379 483 -28 2200 104 3 0 chr10 6228469 6228766 -134087999 + AluSp SINE Alu 2 299 -14 1440 162 19 11 chr10 6228980 6229245 -134087520 - MER1A DNA MER1_type 0 529 263 1694 180 10 10 chr10 6229613 6229913 -134086852 + AluJb SINE Alu 5 304 -8 24 67 0 0 chr10 6231380 6231425 -134085340 + AT_rich Low_complexity Low_complexity 1 45 0 1821 138 7 14 chr10 6231451 6231741 -134085024 + AluSx SINE Alu 7 294 -18 2309 102 0 36 chr10 6231844 6232037 -134084728 + L1PA15 LINE L1 5845 6023 -142 1720 154 33 10 chr10 6232037 6232336 -134084429 + AluJb SINE Alu 1 306 -6 2309 102 0 36 chr10 6232336 6232475 -134084290 + L1PA15 LINE L1 6023 6165 0 1978 82 16 0 chr10 6232542 6232799 -134083966 + AluSx SINE Alu 1 261 -51 851 71 18 0 chr10 6232843 6232955 -134083810 + AluSg/x SINE Alu 185 298 -14 28 0 0 0 chr10 6233625 6233653 -134083112 + AT_rich Low_complexity Low_complexity 1 28 0 1314 217 119 46 chr10 6234223 6234744 -134082021 + MLT1E3 LTR MaLR 32 590 -34 2109 108 3 10 chr10 6234893 6235198 -134081567 - AluSc SINE Alu -6 303 1 225 178 171 112 chr10 6235207 6235359 -134081406 - L1MC4 LINE L1 -2 8040 7880 366 280 21 0 chr10 6235453 6235546 -134081219 - MIR SINE MIR -108 154 60 291 284 0 0 chr10 6235588 6235662 -134081103 - LTR33A LTR ERVL -1 522 449 313 308 60 8 chr10 6235893 6236026 -134080739 + MIR3 SINE MIR 51 190 -18 492 203 92 26 chr10 6236555 6236708 -134080057 + LTR67 LTR ERVL 395 557 0 626 197 15 22 chr10 6236710 6236847 -134079918 - MIR SINE MIR -64 198 63 1674 167 24 17 chr10 6236902 6237224 -134079541 + AluJb SINE Alu 1 312 0 997 163 5 16 chr10 6237458 6237642 -134079123 - AluJb SINE Alu -10 302 121 622 108 32 0 chr10 6237746 6237839 -134078926 - AluJ/FLAM SINE Alu -215 97 2 3492 229 111 3 chr10 6237910 6238857 -134077908 - L1MC4 LINE L1 -237 7805 6757 2216 110 0 10 chr10 6238857 6238879 -134077886 - AluSx SINE Alu -5 307 286 264 100 0 0 chr10 6238879 6238919 -134077846 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 2216 110 0 10 chr10 6238919 6239206 -134077559 - AluSx SINE Alu -26 286 1 428 214 9 0 chr10 6239468 6239580 -134077185 + (ATG)n Simple_repeat Simple_repeat 2 114 0 423 192 73 136 chr10 6240529 6240706 -134076059 + MER5A DNA MER1_type 24 189 0 2054 228 108 67 chr10 6241487 6241968 -134074797 - MER21B LTR ERV1 -51 812 287 1997 117 10 0 chr10 6241968 6242258 -134074507 - AluSx SINE Alu -19 293 1 2054 228 108 67 chr10 6242258 6242539 -134074226 - MER21B LTR ERV1 -576 287 19 324 257 89 20 chr10 6243438 6243539 -134073226 - L2 LINE L2 -16 3297 3190 1938 116 3 31 chr10 6243700 6243987 -134072778 + AluJb SINE Alu 2 281 -31 216 0 0 0 chr10 6243987 6244011 -134072754 + (CA)n Simple_repeat Simple_repeat 2 25 0 1938 116 3 31 chr10 6244011 6244042 -134072723 + AluJb SINE Alu 281 311 -1 22 35 0 0 chr10 6244493 6244522 -134072243 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr10 6244563 6244598 -134072167 + GC_rich Low_complexity Low_complexity 1 35 0 379 238 220 24 chr10 6247214 6247382 -134069383 - LTR33 LTR ERVL -241 280 80 226 262 0 0 chr10 6247431 6247492 -134069273 - LTR33 LTR ERVL -411 110 50 205 267 198 0 chr10 6247642 6247743 -134069022 - L2 LINE L2 0 3313 3193 1886 134 3 17 chr10 6248402 6248700 -134068065 + AluJo SINE Alu 7 300 -12 2288 88 3 0 chr10 6248906 6249212 -134067553 + AluSx SINE Alu 1 307 -5 1119 89 0 182 chr10 6249224 6249460 -134067305 + 7SK RNA RNA 1 193 0 1026 116 103 1 chr10 6249477 6249684 -134067081 - L1MA5A LINE L1 -421 5876 5652 1864 131 10 16 chr10 6249939 6250244 -134066521 + AluSx SINE Alu 1 303 -9 1976 139 0 7 chr10 6250316 6250626 -134066139 + AluSx SINE Alu 1 308 -4 285 235 82 20 chr10 6251542 6251640 -134065125 - MER5B DNA MER1_type -14 164 61 420 271 49 7 chr10 6251640 6251784 -134064981 + MER112 DNA MER1_type 94 243 -17 1605 189 3 13 chr10 6252196 6252497 -134064268 + AluJb SINE Alu 2 299 -13 2022 118 33 7 chr10 6252497 6252801 -134063964 + AluSx SINE Alu 1 312 0 288 263 63 0 chr10 6252925 6253020 -134063745 - L2 LINE L2 -27 3286 3186 2114 95 3 3 chr10 6253171 6253467 -134063298 + AluSx SINE Alu 1 296 -16 565 274 119 51 chr10 6253603 6253848 -134062917 - L2 LINE L2 -342 2972 2745 2045 125 0 7 chr10 6253848 6254145 -134062620 - AluSx SINE Alu -15 297 3 565 274 119 51 chr10 6254145 6254385 -134062380 - L2 LINE L2 -569 2745 2454 2508 46 0 7 chr10 6254797 6255103 -134061662 - AluY SINE Alu -7 304 1 710 161 0 15 chr10 6255567 6255697 -134061068 - L1PB4 LINE L1 -101 6055 5928 315 0 0 0 chr10 6255729 6255764 -134061001 + (TG)n Simple_repeat Simple_repeat 2 36 0 1623 172 7 14 chr10 6255765 6256055 -134060710 - AluJb SINE Alu -24 288 1 189 0 0 0 chr10 6256085 6256106 -134060659 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1808 108 75 4 chr10 6256107 6256385 -134060380 - AluSg SINE Alu -12 298 1 320 145 0 32 chr10 6256523 6256585 -134060180 + FAM SINE Alu 119 178 -1 2051 95 29 13 chr10 6256588 6256894 -134059871 + AluSp SINE Alu 3 313 0 1556 189 38 0 chr10 6256937 6257228 -134059537 - AluJb SINE Alu -10 302 1 2179 92 7 10 chr10 6257607 6257911 -134058854 + AluSx SINE Alu 3 305 -7 238 223 62 9 chr10 6257912 6258024 -134058741 + L1MC4 LINE L1 7925 8042 0 2017 131 3 6 chr10 6258094 6258406 -134058359 - AluSq SINE Alu -2 311 1 246 187 120 27 chr10 6258411 6258486 -134058279 + L2 LINE L2 2885 2966 -348 370 278 30 54 chr10 6258642 6258808 -134057957 - L1MCa LINE L1 -1339 6983 1996 1155 181 0 23 chr10 6258815 6259030 -134057735 - AluJo SINE Alu -30 282 73 2928 163 45 0 chr10 6259040 6259569 -134057196 - L1MB3 LINE L1 -2 6181 5629 1641 236 79 56 chr10 6259569 6260214 -134056551 - L1MC4a LINE L1 -642 7166 6507 22 70 0 0 chr10 6260832 6260875 -134055890 + GC_rich Low_complexity Low_complexity 1 43 0 405 278 30 0 chr10 6261518 6261651 -134055114 + L3 LINE CR1 1133 1269 -308 3779 183 45 51 chr10 6261665 6262626 -134054139 - LTR5 LTR ERVK -14 955 1 586 101 114 95 chr10 6262854 6262971 -134053794 - L1PA13 LINE L1 -2 6161 6039 1778 143 61 0 chr10 6262971 6263147 -134053618 - AluSx SINE Alu 0 312 109 2138 88 3 7 chr10 6263147 6263442 -134053323 - AluSx SINE Alu -11 301 8 1778 143 61 0 chr10 6263442 6263559 -134053206 - AluSx SINE Alu -203 109 1 586 101 114 95 chr10 6263559 6263599 -134053166 - L1PA13 LINE L1 -124 6039 6001 2080 106 33 0 chr10 6263984 6264286 -134052479 - AluSp SINE Alu -1 312 1 444 262 0 16 chr10 6265509 6265635 -134051130 + MIR SINE MIR 13 136 -126 2045 103 14 3 chr10 6266130 6266420 -134050345 - AluSx SINE Alu -19 293 1 671 171 106 0 chr10 6267615 6267738 -134049027 + AluJo SINE Alu 1 136 -176 2154 77 3 71 chr10 6268180 6268516 -134048249 - AluSp SINE Alu 0 313 1 321 206 119 44 chr10 6268526 6268548 -134048217 + Charlie7 DNA MER1_type 2437 2456 -156 1757 173 16 0 chr10 6268548 6268854 -134047911 - AluJo SINE Alu -1 311 1 321 206 119 44 chr10 6268854 6268991 -134047774 + Charlie7 DNA MER1_type 2456 2608 -4 371 320 29 0 chr10 6269647 6269750 -134047015 - MIR SINE MIR -88 174 69 1667 149 0 0 chr10 6269750 6269998 -134046767 + AluJb SINE Alu 50 297 -15 257 266 41 101 chr10 6270105 6270372 -134046393 + L2 LINE L2 2837 3087 -185 260 191 0 0 chr10 6271312 6271359 -134045406 + MIR3 SINE MIR 108 154 -54 1899 123 23 13 chr10 6271963 6272271 -134044494 - AluSq SINE Alu 0 313 3 284 314 51 7 chr10 6272607 6272744 -134044021 - MIR SINE MIR -104 158 16 997 296 173 18 chr10 6272875 6273541 -134043224 + L1ME3A LINE L1 5348 6116 -54 1477 165 85 0 chr10 6273585 6273845 -134042920 - AluJo SINE Alu -30 282 1 182 293 165 45 chr10 6273887 6274020 -134042745 + MIR3 SINE MIR 34 182 -26 2145 103 16 7 chr10 6274500 6274986 -134041779 - AluSq SINE Alu 0 313 1 259 345 159 0 chr10 6276122 6276267 -134040498 + MIR SINE MIR 95 262 0 413 236 8 79 chr10 6276314 6276441 -134040324 - MIR SINE MIR -110 152 35 917 106 8 8 chr10 6277225 6277357 -134039408 + FLAM_C SINE Alu 1 132 -1 183 129 0 0 chr10 6277380 6277411 -134039354 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 353 280 75 0 chr10 6277523 6277616 -134039149 - L1ME4a LINE L1 -58 6063 5964 1770 176 13 0 chr10 6277628 6277929 -134038836 - AluJo SINE Alu -3 309 5 2661 168 24 43 chr10 6278130 6278176 -134038589 + L1MB3 LINE L1 5657 5702 -481 1369 225 13 22 chr10 6278176 6278487 -134038278 - AluJo SINE Alu -4 308 1 2661 168 24 43 chr10 6278487 6278707 -134038058 + L1MB3 LINE L1 5702 5925 -258 1692 160 76 0 chr10 6278707 6278995 -134037770 + AluJo SINE Alu 1 310 -2 2661 168 24 43 chr10 6278995 6279264 -134037501 + L1MB3 LINE L1 5925 6183 0 754 93 0 0 chr10 6280676 6280773 -134035992 + AluS SINE Alu 1 97 -216 215 79 26 0 chr10 6280781 6280819 -134035946 + (TA)n Simple_repeat Simple_repeat 1 39 0 2460 59 0 10 chr10 6280847 6281154 -134035611 - AluY SINE Alu -7 304 1 2094 139 0 0 chr10 6281202 6281512 -134035253 - AluSx SINE Alu -2 310 1 234 343 28 28 chr10 6281514 6281622 -134035143 - MER5B DNA MER1_type -38 140 33 2208 114 0 3 chr10 6281622 6281928 -134034837 - AluSq SINE Alu -5 308 4 659 151 19 0 chr10 6281938 6282044 -134034721 - FLAM_C SINE Alu -35 108 1 2360 86 3 0 chr10 6282776 6283079 -134033686 - AluSq SINE Alu -9 304 1 25 51 0 0 chr10 6283266 6283305 -134033460 + AT_rich Low_complexity Low_complexity 1 39 0 966 112 8 0 chr10 6283803 6283937 -134032828 - AluJo SINE Alu -177 135 1 401 281 113 20 chr10 6284015 6284218 -134032547 + MLT1J LTR MaLR 1 222 -289 1959 141 0 16 chr10 6284218 6284522 -134032243 + AluSx SINE Alu 1 299 -13 450 200 61 9 chr10 6284968 6285083 -134031682 - L1MC4 LINE L1 -4 8038 7918 342 115 0 0 chr10 6285094 6285146 -134031619 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 183 80 0 0 chr10 6285206 6285231 -134031534 + (TG)n Simple_repeat Simple_repeat 2 26 0 2038 216 65 93 chr10 6285268 6285619 -134031146 - L1MC4 LINE L1 -138 7904 7545 2443 192 29 27 chr10 6285619 6285959 -134030806 - L1MB2 LINE L1 -3 6168 5825 2456 57 0 16 chr10 6285959 6286274 -134030491 - AluY SINE Alu 0 311 2 2443 192 29 27 chr10 6286274 6286455 -134030310 - L1MB2 LINE L1 -346 5825 5646 2038 216 65 93 chr10 6286455 6286649 -134030116 - L1MC4 LINE L1 -497 7545 7347 2350 80 0 0 chr10 6286649 6286949 -134029816 - AluSx SINE Alu -12 300 1 2038 216 65 93 chr10 6286949 6287078 -134029687 - L1MC4 LINE L1 -695 7347 7216 2266 107 0 0 chr10 6287078 6287378 -134029387 - AluSx SINE Alu -12 300 1 2038 216 65 93 chr10 6287378 6287657 -134029108 - L1MC4 LINE L1 -826 7216 6976 809 175 7 7 chr10 6287658 6287795 -134028970 + FLAM_C SINE Alu 5 141 -2 312 203 14 14 chr10 6287795 6287869 -134028896 - L1MC4 LINE L1 -1050 6992 6919 1787 160 0 10 chr10 6287922 6288216 -134028549 - AluSx SINE Alu -21 291 1 200 358 62 0 chr10 6288636 6288717 -134028048 - MIR SINE MIR -80 128 43 198 337 12 12 chr10 6289005 6289088 -134027677 - L3 LINE CR1 -384 1193 1111 387 0 0 0 chr10 6289273 6289316 -134027449 + (CA)n Simple_repeat Simple_repeat 2 44 0 243 88 0 0 chr10 6289480 6289514 -134027251 + (T)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr10 6289794 6289840 -134026925 + (TG)n Simple_repeat Simple_repeat 2 47 0 209 366 37 12 chr10 6290003 6290085 -134026680 - MIR SINE MIR -50 212 129 1507 176 21 35 chr10 6290196 6290509 -134026256 + AluJo SINE Alu 1 309 0 357 325 68 0 chr10 6290555 6290672 -134026093 - L2 LINE L2 0 3272 3148 1093 203 64 88 chr10 6290696 6291149 -134025616 - LTR7 LTR ERV1 -8 442 1 466 331 127 19 chr10 6291544 6291867 -134024898 + L3 LINE CR1 1192 1549 -28 2144 124 3 0 chr10 6291988 6292295 -134024470 - AluSx SINE Alu -1 311 4 1253 127 5 20 chr10 6293255 6293452 -134023313 - AluJ SINE Alu -9 303 110 1911 147 99 27 chr10 6293452 6293953 -134022812 - MLT2A2 LTR ERVL 0 554 2 724 155 0 9 chr10 6293953 6294069 -134022696 - AluJ SINE Alu -197 115 1 1637 146 3 7 chr10 6294071 6294103 -134022662 + Tigger3(Golem) DNA MER2_type 2742 2773 -255 1964 116 29 0 chr10 6294103 6294403 -134022362 - AluSx SINE Alu 0 308 1 1637 146 3 7 chr10 6294403 6294657 -134022108 + Tigger3(Golem) DNA MER2_type 2773 3028 0 891 166 57 26 chr10 6294764 6294957 -134021808 - Tigger2a DNA MER2_type -235 199 1 458 323 45 14 chr10 6294957 6295136 -134021629 - L1M4 LINE L1 -2374 3772 3589 1672 129 0 12 chr10 6295146 6295402 -134021363 + AluSx SINE Alu 60 312 0 2295 97 0 0 chr10 6295618 6295908 -134020857 - AluSx SINE Alu -22 290 1 908 144 24 0 chr10 6295909 6296076 -134020689 - L1MC1 LINE L1 -481 5852 5682 1668 143 10 67 chr10 6296608 6296922 -134019843 - AluJb SINE Alu -10 302 7 217 292 19 97 chr10 6297180 6297334 -134019431 + MIR3 SINE MIR 64 205 -3 22 0 0 0 chr10 6297776 6297798 -134018967 + GC_rich Low_complexity Low_complexity 1 22 0 303 243 0 58 chr10 6298502 6298605 -134018160 + G-rich Low_complexity Low_complexity 6 102 0 254 269 16 44 chr10 6298523 6298705 -134018060 + (CGGGG)n Simple_repeat Simple_repeat 2 178 0 * 23 33 0 0 chr10 6300252 6300282 -134016483 + GC_rich Low_complexity Low_complexity 1 30 0 35 83 0 0 chr10 6300536 6300620 -134016145 + GC_rich Low_complexity Low_complexity 1 84 0 330 311 8 0 chr10 6300918 6301037 -134015728 + CT-rich Low_complexity Low_complexity 2 121 0 22 35 0 0 chr10 6301219 6301248 -134015517 + GC_rich Low_complexity Low_complexity 1 29 0 2318 106 0 0 chr10 6302492 6302804 -134013961 - AluSx SINE Alu 0 312 1 1599 164 0 69 chr10 6302891 6303086 -134013679 - AluJo SINE Alu 0 318 111 9928 33 16 103 chr10 6303086 6304538 -134012227 - SVA Other Other -4 1382 57 207 0 0 0 chr10 6304538 6304561 -134012204 + (GGGAGA)n Simple_repeat Simple_repeat 1 23 0 1599 164 0 69 chr10 6304561 6304703 -134012062 - AluJo SINE Alu -205 113 1 1680 150 31 14 chr10 6305196 6305483 -134011282 - AluJo SINE Alu -20 292 1 198 0 0 0 chr10 6305483 6305505 -134011260 + (T)n Simple_repeat Simple_repeat 1 22 0 1824 103 38 0 chr10 6306585 6306848 -134009917 - AluSq SINE Alu -12 301 29 2194 79 41 0 chr10 6306872 6307163 -134009602 - AluY SINE Alu -8 303 1 284 142 58 24 chr10 6307430 6307460 -134009305 - AluSc SINE Alu -173 126 123 1823 64 8 0 chr10 6307460 6307694 -134009071 - AluY SINE Alu 0 311 76 284 142 58 24 chr10 6307694 6307744 -134009021 - AluSc SINE Alu -176 123 76 * 288 164 30 30 chr10 6307727 6307794 -134008971 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307777 6307844 -134008921 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307827 6307894 -134008871 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307877 6307944 -134008821 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307927 6307994 -134008771 - AluY SINE Alu -159 142 76 934 74 16 0 chr10 6307995 6308117 -134008648 - AluYb8 SINE Alu -192 126 3 316 45 0 0 chr10 6308126 6308170 -134008595 - tRNA-Cys-TGC tRNA tRNA -31 44 1 894 149 0 0 chr10 6309770 6309911 -134006854 - FLAM_C SINE Alu -2 141 1 1471 156 71 7 chr10 6310364 6310633 -134006132 + AluJo SINE Alu 2 287 -25 2036 134 27 21 chr10 6311214 6311549 -134005216 + MER1B DNA MER1_type 1 337 0 827 181 17 23 chr10 6311627 6311804 -134004961 - L1PA16 LINE L1 0 6166 5991 260 203 18 74 chr10 6312433 6312596 -134004169 + (CTGGGG)n Simple_repeat Simple_repeat 5 158 0 549 257 47 18 chr10 6312860 6313031 -134003734 + MER5B DNA MER1_type 1 176 -2 626 141 29 106 chr10 6315463 6315520 -134001245 - L1MB3 LINE L1 0 6183 6123 333 0 0 0 chr10 6315520 6315557 -134001208 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2083 101 0 14 chr10 6315557 6315843 -134000922 - AluSx SINE Alu -30 282 1 626 141 29 106 chr10 6315843 6315954 -134000811 - L1MB3 LINE L1 -58 6125 6027 481 127 0 0 chr10 6316919 6316990 -133999775 - FLAM SINE Alu -15 128 58 225 94 0 0 chr10 6317181 6317213 -133999552 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1851 146 0 4 chr10 6317227 6317507 -133999258 - AluJo SINE Alu -27 285 7 252 0 0 0 chr10 6318053 6318081 -133998684 + (CTG)n Simple_repeat Simple_repeat 2 29 0 264 272 11 11 chr10 6318083 6318175 -133998590 + (TG)n Simple_repeat Simple_repeat 2 93 0 217 186 12 12 chr10 6318196 6318282 -133998483 + (TG)n Simple_repeat Simple_repeat 1 86 0 966 230 59 45 chr10 6319444 6319818 -133996947 - L1MB5 LINE L1 -1 6173 5795 2012 104 28 7 chr10 6320738 6321027 -133995738 - AluSp SINE Alu -18 295 1 1910 137 3 20 chr10 6321589 6321895 -133994870 - AluJb SINE Alu -10 302 2 180 228 0 0 chr10 6323544 6323601 -133993164 + (CGTG)n Simple_repeat Simple_repeat 2 58 0 * 204 254 32 0 chr10 6323579 6323642 -133993123 + (TG)n Simple_repeat Simple_repeat 1 65 0 2421 80 0 0 chr10 6323914 6324215 -133992550 + AluSx SINE Alu 1 301 -11 294 246 16 0 chr10 6324606 6324667 -133992098 + MIR SINE MIR 96 157 -105 285 291 22 82 chr10 6324769 6324951 -133991814 + MIR3 SINE MIR 35 205 -3 873 179 11 17 chr10 6326851 6327133 -133989632 - MER1B DNA MER1_type 0 339 1 499 262 115 47 chr10 6327443 6327634 -133989131 + MIR SINE MIR 37 240 -22 2550 64 0 0 chr10 6327830 6328126 -133988639 - AluSq SINE Alu -17 296 1 22 0 0 0 chr10 6332367 6332389 -133984376 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 6332842 6332865 -133983900 + AT_rich Low_complexity Low_complexity 1 23 0 2362 109 0 0 chr10 6332865 6333177 -133983588 - AluSx SINE Alu 0 312 1 192 302 35 35 chr10 6333357 6333443 -133983322 + MIR SINE MIR 66 151 -57 412 299 59 18 chr10 6334083 6334304 -133982461 + L2 LINE L2 2821 3050 -263 2004 138 10 0 chr10 6334687 6334976 -133981789 - AluJb SINE Alu -20 292 1 2136 148 0 0 chr10 6335265 6335575 -133981190 - AluSx SINE Alu -2 310 1 225 0 0 0 chr10 6335588 6335613 -133981152 + (A)n Simple_repeat Simple_repeat 1 25 0 4415 85 5 0 chr10 6335667 6336257 -133980508 - L1PA12 LINE L1 0 6168 5576 233 287 59 20 chr10 6336363 6336464 -133980301 - MIR SINE MIR -98 164 60 2067 131 0 0 chr10 6336793 6337083 -133979682 - AluJb SINE Alu -21 291 2 439 212 71 0 chr10 6337085 6337184 -133979581 + Charlie2 DNA MER1_type 43 148 -2714 2046 115 3 0 chr10 6337388 6337674 -133979091 - AluSx SINE Alu -25 287 1 2541 163 48 39 chr10 6337674 6338018 -133978747 - L1MD3 LINE L1 -22 7973 7621 2351 94 0 7 chr10 6338018 6338315 -133978450 - AluSg SINE Alu -15 295 1 2541 163 48 39 chr10 6338315 6338536 -133978229 - L1MD3 LINE L1 -374 7621 7403 599 186 8 0 chr10 6338540 6338658 -133978107 - MLT1F1 LTR MaLR -447 120 2 865 122 46 8 chr10 6338660 6338791 -133977974 + AluJo SINE Alu 1 136 -176 881 183 11 123 chr10 6338795 6338939 -133977826 - L1MD3 LINE L1 -734 7261 7163 1707 165 13 22 chr10 6338939 6339254 -133977511 - AluJo SINE Alu 0 312 1 881 183 11 123 chr10 6339254 6339394 -133977371 - L1MD3 LINE L1 -832 7163 7009 2304 115 0 0 chr10 6339703 6339998 -133976767 - AluSx SINE Alu -17 295 1 296 330 46 0 chr10 6340118 6340227 -133976538 - L2 LINE L2 -10 3262 3149 1868 182 0 7 chr10 6340828 6341135 -133975630 - AluJo SINE Alu -7 305 1 802 164 31 0 chr10 6341135 6341263 -133975502 - AluJo SINE Alu -177 135 4 406 259 184 6 chr10 6342052 6342210 -133974555 - MIR3 SINE MIR -1 207 22 2325 108 0 0 chr10 6342210 6342505 -133974260 - AluSg SINE Alu -15 295 1 1812 133 0 46 chr10 6342513 6342827 -133973938 - AluJb SINE Alu 0 314 14 731 91 10 0 chr10 6342843 6342942 -133973823 - HY3 scRNA scRNA -1 100 1 2156 106 0 10 chr10 6343394 6343752 -133973013 - AluSx SINE Alu 0 355 1 29 28 0 0 chr10 6343752 6343788 -133972977 + AT_rich Low_complexity Low_complexity 1 36 0 610 223 114 0 chr10 6343788 6343954 -133972811 - L1PA16 LINE L1 -20 6146 5962 285 290 23 97 chr10 6344966 6345142 -133971623 - MIR SINE MIR -70 192 30 4758 147 20 71 chr10 6345417 6345471 -133971294 + L1MA7 LINE L1 5278 5333 -958 2121 120 0 14 chr10 6345471 6345763 -133971002 + AluSx SINE Alu 19 306 -6 4758 147 20 71 chr10 6345763 6346002 -133970763 + L1MA7 LINE L1 5333 5583 -708 2436 92 3 9 chr10 6346002 6346317 -133970448 + AluSp SINE Alu 1 313 0 4758 147 20 71 chr10 6346317 6347087 -133969678 + L1MA7 LINE L1 5583 6287 -4 1042 125 96 82 chr10 6347324 6347394 -133969371 + MLT1A1 LTR MaLR 1 69 -359 2470 59 0 20 chr10 6347394 6347697 -133969068 + AluY SINE Alu 1 297 -14 1042 125 96 82 chr10 6347697 6347976 -133968789 + MLT1A1 LTR MaLR 69 425 -3 568 242 16 59 chr10 6348025 6348211 -133968554 - MER5B DNA MER1_type 0 178 1 2358 110 3 0 chr10 6348799 6349107 -133967658 + AluSg SINE Alu 1 309 -1 479 281 106 102 chr10 6349518 6350028 -133966737 + L1MC4a LINE L1 5599 6061 -60 2352 97 0 7 chr10 6350028 6350328 -133966437 - AluSg1 SINE Alu -11 298 1 479 281 106 102 chr10 6350328 6350385 -133966380 + L1MC4a LINE L1 6061 6116 -5 2229 90 10 10 chr10 6350870 6351159 -133965606 + AluSx SINE Alu 1 289 -23 1689 148 26 22 chr10 6351592 6351903 -133964862 + MER47A DNA MER2_type 1 312 -54 2296 119 3 0 chr10 6351916 6352227 -133964538 - AluSx SINE Alu 0 312 1 2272 97 30 0 chr10 6352235 6352534 -133964231 - AluSx SINE Alu -4 308 1 286 250 0 12 chr10 6354702 6354782 -133961983 + L1ME4a LINE L1 5725 5803 -318 599 280 21 5 chr10 6354799 6354988 -133961777 - LTR16A1 LTR ERVL -14 443 252 324 262 80 43 chr10 6355177 6355364 -133961401 + L1ME4a LINE L1 5800 5993 -128 796 157 0 29 chr10 6356163 6356606 -133960159 + (TCCA)n Simple_repeat Simple_repeat 1 429 0 1071 92 0 0 chr10 6356625 6356778 -133959987 + (TCCA)n Simple_repeat Simple_repeat 4 156 0 192 304 0 0 chr10 6356784 6356830 -133959935 - L2 LINE L2 -16 3297 3252 253 323 23 46 chr10 6357001 6357131 -133959634 - MIR SINE MIR 0 262 136 225 0 0 0 chr10 6357333 6357358 -133959407 + (A)n Simple_repeat Simple_repeat 1 25 0 259 233 12 81 chr10 6357362 6357448 -133959317 - L1ME3A LINE L1 -123 6047 5968 1465 258 65 39 chr10 6357516 6358278 -133958487 - L1ME3A LINE L1 -214 5956 5172 1447 105 5 5 chr10 6358275 6358494 -133958271 + L1PA14 LINE L1 5820 6038 -123 * 1125 96 0 0 chr10 6358497 6358633 -133958132 + AluSq/x SINE Alu 1 136 -177 2273 124 0 6 chr10 6358633 6358947 -133957818 + AluSx SINE Alu 1 312 0 792 123 22 0 chr10 6358949 6359087 -133957678 + L1PA14 LINE L1 6020 6160 -1 2494 62 7 3 chr10 6359093 6359400 -133957365 + AluY SINE Alu 1 308 -3 354 304 0 0 chr10 6359412 6359524 -133957241 - L1ME3A LINE L1 -988 5158 5047 727 254 136 8 chr10 6359526 6359871 -133956894 - LTR50 LTR ERVL 0 795 326 3802 92 0 25 chr10 6359884 6360408 -133956357 - MER9 LTR ERVK 0 511 1 516 234 102 6 chr10 6360452 6360604 -133956161 - LTR50 LTR ERVL -616 159 9 2003 164 3 0 chr10 6360607 6360906 -133955859 - AluSx SINE Alu -12 300 1 1046 288 107 10 chr10 6360909 6361516 -133955249 - L1ME3A LINE L1 -1097 5049 4384 * 3524 254 53 59 chr10 6361503 6361989 -133954776 - L1MC4 LINE L1 0 8042 7554 2494 85 0 0 chr10 6361989 6362296 -133954469 - AluSx SINE Alu 0 312 6 3524 254 53 59 chr10 6362296 6362809 -133953956 - L1MC4 LINE L1 -488 7554 7054 1806 153 10 35 chr10 6362809 6363123 -133953642 - AluJo SINE Alu 0 312 7 3524 254 53 59 chr10 6363123 6363604 -133953161 - L1MC4 LINE L1 -988 7054 6571 594 257 39 45 chr10 6363625 6363804 -133952961 - MER45A DNA AcHobo 0 178 1 2634 209 80 15 chr10 6363890 6364544 -133952221 - MER45B DNA AcHobo -68 972 277 445 213 37 81 chr10 6364555 6364593 -133952172 - MER45B DNA AcHobo -895 145 107 2649 59 0 0 chr10 6364593 6364898 -133951867 + AluSx SINE Alu 1 305 -7 445 213 37 81 chr10 6364898 6364995 -133951770 - MER45B DNA AcHobo -933 107 16 34 0 0 22 chr10 6365271 6365290 -133951475 + AT_rich Low_complexity Low_complexity 1 19 -25 1900 123 90 0 chr10 6365290 6365567 -133951198 + AluSg SINE Alu 1 302 -8 34 0 0 22 chr10 6365567 6365592 -133951173 + AT_rich Low_complexity Low_complexity 19 44 0 2051 154 0 7 chr10 6365660 6365966 -133950799 + AluJb SINE Alu 1 304 -8 305 213 0 16 chr10 6365974 6366035 -133950730 - L1ME3A LINE L1 -1771 4375 4316 646 191 104 0 chr10 6366262 6366377 -133950388 - FLAM_A SINE Alu -5 128 2 2275 92 0 7 chr10 6366770 6367098 -133949667 + AluSq SINE Alu 2 327 0 463 309 116 77 chr10 6367271 6367861 -133948904 + L2 LINE L2 2670 3271 -1 224 319 14 14 chr10 6368479 6368551 -133948214 + MIR SINE MIR 36 107 -155 313 404 7 7 chr10 6368870 6369006 -133947759 - L2 LINE L2 -4 3268 3133 2414 80 3 7 chr10 6369332 6369634 -133947131 + AluSx SINE Alu 1 301 -11 1490 114 0 10 chr10 6369923 6370125 -133946640 - AluSg/x SINE Alu -8 302 103 1722 194 14 81 chr10 6370489 6370845 -133945920 + MLT1B LTR MaLR 1 326 -64 1781 171 24 0 chr10 6370845 6371143 -133945622 + AluJo SINE Alu 1 305 -7 1722 194 14 81 chr10 6371143 6371204 -133945561 + MLT1B LTR MaLR 326 390 0 1226 224 88 42 chr10 6371206 6371485 -133945280 - Charlie4a DNA MER1_type -1458 503 193 1821 160 38 0 chr10 6371485 6371778 -133944987 + AluJb SINE Alu 1 304 -8 1226 224 88 42 chr10 6371778 6371954 -133944811 - Charlie4a DNA MER1_type -1768 193 27 1400 95 53 0 chr10 6372546 6372735 -133944030 - AluSg/x SINE Alu -15 297 99 1757 211 59 51 chr10 6373584 6373759 -133943006 - L1MD2 LINE L1 -24 6335 6163 261 0 0 0 chr10 6373759 6373788 -133942977 + (TG)n Simple_repeat Simple_repeat 2 30 0 1757 211 59 51 chr10 6373788 6374015 -133942750 - L1MD2 LINE L1 -196 6163 5939 2594 111 24 77 chr10 6374015 6374142 -133942623 + MSTA LTR MaLR 1 133 -295 2297 94 43 0 chr10 6374142 6374441 -133942324 - AluSx SINE Alu 0 312 1 2594 111 24 77 chr10 6374441 6374765 -133942000 + MSTA LTR MaLR 133 428 0 1757 211 59 51 chr10 6374765 6374842 -133941923 - L1MD2 LINE L1 -420 5939 5864 2226 105 0 3 chr10 6374842 6375136 -133941629 - AluSc SINE Alu -16 293 1 1757 211 59 51 chr10 6375136 6375193 -133941572 - L1MD2 LINE L1 -495 5864 5809 2153 113 20 3 chr10 6375193 6375495 -133941270 - AluSg SINE Alu -3 307 1 1757 211 59 51 chr10 6375495 6375580 -133941185 - L1MD2 LINE L1 -550 5809 5701 280 226 137 20 chr10 6375626 6375728 -133941037 + L2 LINE L2 3159 3272 0 338 354 97 4 chr10 6375753 6375979 -133940786 + MIR SINE MIR 1 247 -15 383 253 174 47 chr10 6377384 6377637 -133939128 + MLT1J2 LTR MaLR 20 304 -146 3071 87 4 24 chr10 6377726 6378177 -133938588 - L1PB1 LINE L1 0 6151 5710 432 254 61 9 chr10 6378307 6378421 -133938344 - MLT1J LTR MaLR -368 143 24 1223 137 0 0 chr10 6378879 6379054 -133937711 - FAM SINE Alu 0 175 1 2280 98 0 7 chr10 6379892 6380188 -133936577 - AluSq SINE Alu -19 294 1 621 132 0 0 chr10 6380393 6380484 -133936281 - MLT2A2 LTR ERVL -147 306 216 2534 150 17 2 chr10 6380556 6380962 -133935803 + LTR45B LTR ERV1 3 414 -75 2014 222 12 20 chr10 6380994 6381484 -133935281 - L1MCa LINE L1 -3388 3176 2691 3398 169 30 14 chr10 6381489 6382145 -133934620 - L1MB4 LINE L1 0 6180 5514 2273 124 3 0 chr10 6382146 6382453 -133934312 - AluSq SINE Alu -5 308 1 2508 145 15 0 chr10 6382473 6382879 -133933886 - L1MB1 LINE L1 -5 6163 5752 2458 79 0 0 chr10 6382893 6383197 -133933568 - AluY SINE Alu -7 304 1 1527 180 29 26 chr10 6383197 6383287 -133933478 - L1MCa LINE L1 -3948 2616 2528 2090 154 0 0 chr10 6383287 6383598 -133933167 - AluSx SINE Alu -1 311 1 1527 180 29 26 chr10 6383598 6383925 -133932840 - L1MCa LINE L1 -4036 2528 2273 2023 151 3 66 chr10 6383928 6384006 -133932759 + MER7A DNA MER2_type 7 88 -2950 225 0 0 0 chr10 6384006 6384031 -133932734 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1876 151 0 11 chr10 6384031 6384310 -133932455 - AluSx SINE Alu -36 276 1 2023 151 3 66 chr10 6384310 6384595 -133932170 + MER7A DNA MER2_type 86 346 0 1809 158 61 24 chr10 6384595 6385123 -133931642 - L1MCa LINE L1 -4290 2274 1767 13080 26 1 0 chr10 6385123 6387398 -133929367 - L1PA3 LINE L1 0 6155 3880 2296 117 0 16 chr10 6387407 6387724 -133929041 - AluSx SINE Alu 0 312 1 1809 158 61 24 chr10 6387724 6387921 -133928844 - L1MCa LINE L1 -4804 1760 1378 1904 141 48 14 chr10 6388204 6388495 -133928270 + AluSx SINE Alu 1 301 -11 2324 120 0 0 chr10 6388866 6389174 -133927591 - AluSx SINE Alu -4 308 1 2588 63 0 16 chr10 6389193 6389509 -133927256 - AluY SINE Alu 0 311 1 2055 135 0 0 chr10 6390263 6390566 -133926199 - AluSx SINE Alu 0 303 1 2868 78 14 0 chr10 6391185 6391544 -133925221 - THE1B LTR MaLR 0 364 1 3788 208 97 39 chr10 6391675 6392136 -133924629 - L1MCa LINE L1 -4850 1195 762 2204 93 0 14 chr10 6392136 6392446 -133924319 - AluSq SINE Alu 0 306 1 3788 208 97 39 chr10 6392446 6393107 -133923658 - L1MCa LINE L1 -5283 762 7 236 30 30 0 chr10 6393119 6393152 -133923613 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6393279 6393901 -133922864 - MER41B LTR ERV1 0 635 1 1678 174 41 0 chr10 6395293 6395586 -133921179 - AluJo SINE Alu -7 305 1 280 325 8 8 chr10 6396618 6396744 -133920021 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6396889 6396917 -133919848 + (T)n Simple_repeat Simple_repeat 1 28 0 303 322 51 17 chr10 6397176 6397294 -133919471 + L2 LINE L2 3138 3259 -13 2271 123 0 19 chr10 6398965 6399281 -133917484 - AluSx SINE Alu -2 310 1 2535 77 7 0 chr10 6399290 6399600 -133917165 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6399657 6399670 -133917095 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6399670 6399715 -133917050 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 304 81 47 chr10 6399799 6399947 -133916818 - MIR3 SINE MIR -15 193 41 2180 92 44 0 chr10 6400454 6400749 -133916016 + AluSg SINE Alu 2 309 -1 417 265 158 15 chr10 6400778 6400974 -133915791 + MLT1J2 LTR MaLR 111 334 -116 1074 112 0 7 chr10 6401429 6401572 -133915193 - AluSq/x SINE Alu -161 151 10 1057 178 108 91 chr10 6401606 6401892 -133914873 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6401901 6401922 -133914843 + AT_rich Low_complexity Low_complexity 1 21 0 802 125 0 76 chr10 6401928 6402072 -133914693 - FLAM_C SINE Alu 0 143 11 1203 169 105 92 chr10 6402106 6402401 -133914364 - AluJo SINE Alu -13 299 1 565 299 35 53 chr10 6402586 6402904 -133913861 - L1MEd LINE L1 -5397 722 411 901 209 0 0 chr10 6402946 6403118 -133913647 - FAM SINE Alu -3 172 1 1345 225 55 55 chr10 6403794 6404216 -133912549 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6404228 6404285 -133912480 + (CA)n Simple_repeat Simple_repeat 2 57 0 277 57 0 0 chr10 6404285 6404320 -133912445 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6404420 6404537 -133912228 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6404688 6405059 -133911706 + MSTD LTR MaLR 7 396 0 2184 122 0 10 chr10 6405151 6405455 -133911310 + AluSx SINE Alu 1 301 -11 652 218 40 111 chr10 6405822 6406202 -133910563 + L1MC5 LINE L1 7340 7692 -269 370 132 0 0 chr10 6406203 6406256 -133910509 + Alu SINE Alu 2 54 -248 1735 133 0 49 chr10 6406257 6406542 -133910223 + AluSx SINE Alu 12 282 -30 509 268 82 10 chr10 6406576 6406770 -133909995 + L1MC5 LINE L1 7678 7885 -76 2184 114 16 0 chr10 6408392 6408698 -133908067 + AluSx SINE Alu 1 311 -1 3080 248 78 29 chr10 6409353 6410350 -133906415 + MER97b DNA MER1_type? 1 1046 -7 291 362 60 0 chr10 6410561 6410710 -133906055 + L2 LINE L2 3114 3271 -1 866 277 74 38 chr10 6411204 6411677 -133905088 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6412199 6412313 -133904452 - MER41B LTR ERV1 0 635 516 248 218 39 26 chr10 6412317 6412395 -133904370 - L1MC5 LINE L1 -519 7442 7364 2105 131 13 7 chr10 6412400 6412706 -133904059 - AluSx SINE Alu -4 308 1 330 305 135 10 chr10 6413072 6413272 -133903493 + LTR16A LTR ERVL 1 225 -225 1927 134 62 0 chr10 6413391 6413683 -133903082 - AluSx SINE Alu -2 310 1 199 206 0 0 chr10 6415998 6416032 -133900733 - L2 LINE L2 -49 3264 3231 3182 149 28 0 chr10 6416032 6416541 -133900224 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6416554 6416617 -133900148 + AT_rich Low_complexity Low_complexity 1 63 0 2129 125 3 10 chr10 6416837 6417140 -133899625 + AluJb SINE Alu 1 301 -11 1353 193 120 7 chr10 6417370 6417645 -133899120 - AluJb SINE Alu -6 306 1 265 231 39 0 chr10 6417875 6417927 -133898838 - MLT1K LTR MaLR -357 231 178 286 322 80 75 chr10 6418102 6418555 -133898210 + L2 LINE L2 449 903 -2411 190 324 66 81 chr10 6418558 6418694 -133898071 + L2 LINE L2 1089 1222 -2092 936 311 97 40 chr10 6418776 6419955 -133896810 + L2 LINE L2 2056 3308 -5 1307 201 21 49 chr10 6420041 6420329 -133896436 - MLT2B1 LTR ERVL -8 512 233 1390 198 52 7 chr10 6420628 6420916 -133895849 + L1M3 LINE L1 5443 5743 -437 2605 145 9 53 chr10 6420916 6421351 -133895414 + L1MB3 LINE L1 5679 6089 -94 2076 124 0 10 chr10 6421351 6421650 -133895115 - AluSx SINE Alu -16 296 1 2605 145 9 53 chr10 6421650 6421739 -133895026 + L1MB3 LINE L1 6089 6180 -3 1778 170 3 14 chr10 6421890 6422184 -133894581 - AluSx SINE Alu -21 291 1 371 289 108 49 chr10 6422759 6423028 -133893737 + MER109 Unknown Unknown 70 322 -2110 2311 96 11 20 chr10 6423028 6423383 -133893382 + L1PA10 LINE L1 5817 6168 0 371 289 108 49 chr10 6423383 6423471 -133893294 + MER109 Unknown Unknown 322 779 -1653 235 286 12 36 chr10 6423555 6423639 -133893126 + MER109 Unknown Unknown 536 617 -1815 2005 136 3 23 chr10 6424090 6424400 -133892365 - AluSx SINE Alu -8 304 1 292 39 0 58 chr10 6424420 6424472 -133892293 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 798 135 26 17 chr10 6424494 6424971 -133891794 + (TCCA)n Simple_repeat Simple_repeat 1 481 0 2050 141 0 0 chr10 6426388 6426687 -133890078 + AluSx SINE Alu 1 299 -13 289 312 98 17 chr10 6426866 6427039 -133889726 + L3b LINE CR1 1287 1473 -110 2148 123 7 0 chr10 6428112 6428414 -133888351 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6430571 6430709 -133886056 + MIR SINE MIR 47 203 -59 938 92 0 7 chr10 6430963 6431116 -133885649 + (GA)n Simple_repeat Simple_repeat 1 152 0 277 219 68 14 chr10 6431346 6431419 -133885346 + MIR SINE MIR 68 144 -64 690 192 8 0 chr10 6431587 6431707 -133885058 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6432612 6432675 -133884090 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6432758 6433008 -133883757 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6433005 6433082 -133883683 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6433343 6433434 -133883331 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6433487 6433597 -133883168 + L1MC1 LINE L1 5792 5904 -429 1921 114 88 0 chr10 6434327 6434599 -133882166 + AluSx SINE Alu 1 296 -16 2213 111 3 32 chr10 6435118 6435458 -133881307 + AluSx SINE Alu 1 312 0 2515 72 0 0 chr10 6435684 6435988 -133880777 + AluY SINE Alu 1 304 -7 1517 228 198 92 chr10 6436162 6436364 -133880401 + LTR24B LTR ERV1 1 180 -455 2162 118 7 3 chr10 6436364 6436670 -133880095 - AluSq SINE Alu -6 307 1 1517 228 198 92 chr10 6436670 6437042 -133879723 + LTR24B LTR ERV1 180 635 0 1044 31 87 0 chr10 6439695 6439822 -133876943 - MER85 DNA T2_type -1 138 1 314 308 31 0 chr10 6440249 6440379 -133876386 - L1ME LINE L1 -299 5822 5689 252 323 152 0 chr10 6440905 6441004 -133875761 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6441245 6441574 -133875191 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6441925 6442053 -133874712 + L1ME4a LINE L1 5975 6121 0 2028 101 3 83 chr10 6443307 6443633 -133873132 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6444160 6444331 -133872434 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6445635 6445706 -133871059 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6445816 6445978 -133870787 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6445981 6446105 -133870660 + FLAM_A SINE Alu 1 127 -15 943 213 9 28 chr10 6446110 6446304 -133870461 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6446304 6446661 -133870104 - THE1B LTR MaLR 0 364 1 943 213 9 28 chr10 6446661 6446682 -133870083 + MLT1B LTR MaLR 370 390 0 1774 167 3 7 chr10 6447795 6448095 -133868670 + AluSx SINE Alu 1 299 -13 1941 129 181 38 chr10 6449982 6450407 -133866358 + MER66B LTR ERV1 1 486 0 2387 90 0 23 chr10 6451379 6451689 -133865076 + AluSx SINE Alu 1 303 -9 218 195 0 0 chr10 6451849 6451890 -133864875 + L2 LINE L2 3213 3253 -19 2326 95 7 0 chr10 6452051 6452347 -133864418 - AluSx SINE Alu -14 298 1 1966 125 7 10 chr10 6452456 6452744 -133864021 - AluJo SINE Alu -25 287 1 203 333 0 0 chr10 6453193 6453256 -133863509 + GA-rich Low_complexity Low_complexity 4 66 0 * 214 328 11 33 chr10 6453210 6453393 -133863372 + G-rich Low_complexity Low_complexity 2 180 0 1648 155 15 92 chr10 6454109 6454444 -133862321 + AluJo SINE Alu 3 311 -1 510 202 64 35 chr10 6456074 6456247 -133860518 - MIR SINE MIR -57 205 28 1210 184 44 41 chr10 6456814 6457134 -133859631 + MER33 DNA MER1_type 4 324 0 257 321 27 27 chr10 6457378 6457490 -133859275 + MIR3 SINE MIR 13 124 -84 519 296 145 37 chr10 6458326 6458897 -133857868 + L2 LINE L2 2070 2702 -612 250 311 110 6 chr10 6459014 6459178 -133857587 + L2 LINE L2 2878 3058 -255 847 187 30 0 chr10 6459431 6459597 -133857168 + L1PB4 LINE L1 5959 6129 -27 2267 127 0 3 chr10 6459597 6459905 -133856860 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr10 6459942 6459968 -133856797 + AT_rich Low_complexity Low_complexity 1 26 0 1252 140 0 0 chr10 6460329 6460508 -133856257 - AluSg/x SINE Alu -3 309 131 24 32 0 0 chr10 6463930 6463961 -133852804 + AT_rich Low_complexity Low_complexity 1 31 0 275 185 17 17 chr10 6464030 6464149 -133852616 + (TA)n Simple_repeat Simple_repeat 2 120 0 2233 110 3 10 chr10 6465203 6465513 -133851252 + AluSp SINE Alu 1 308 -5 24 24 0 24 chr10 6467434 6467454 -133849311 + AT_rich Low_complexity Low_complexity 1 20 -21 1804 164 3 3 chr10 6467454 6467740 -133849025 - AluJo SINE Alu -26 286 1 24 24 0 24 chr10 6467740 6467761 -133849004 + AT_rich Low_complexity Low_complexity 20 41 0 2434 77 3 0 chr10 6468555 6468855 -133847910 - AluY SINE Alu -10 301 1 312 172 0 0 chr10 6469061 6469119 -133847646 + CT-rich Low_complexity Low_complexity 3 60 0 655 148 28 23 chr10 6469135 6469311 -133847454 + CT-rich Low_complexity Low_complexity 3 179 0 1666 181 0 0 chr10 6469336 6469607 -133847158 - AluJb SINE Alu -39 273 3 649 189 30 40 chr10 6469890 6470091 -133846674 - L1MC5 LINE L1 -37 7924 7726 354 59 0 20 chr10 6470098 6470149 -133846616 + U5 snRNA snRNA 6 55 -61 407 204 12 70 chr10 6470149 6470321 -133846444 - L1MC5 LINE L1 -234 7727 7566 245 320 100 27 chr10 6472047 6472197 -133844568 + MIR SINE MIR 31 191 -71 1924 82 0 0 chr10 6473141 6473372 -133843393 - AluSq SINE Alu -82 231 1 389 268 77 22 chr10 6474151 6474334 -133842431 + Charlie2a DNA MER1_type 1694 1886 -976 2370 182 38 5 chr10 6475122 6475568 -133841197 - LOR1b LTR ERV1 0 461 1 180 0 0 0 chr10 6477111 6477131 -133839634 + (A)n Simple_repeat Simple_repeat 1 20 0 265 234 177 42 chr10 6477500 6477692 -133839073 + L2 LINE L2 3000 3217 -96 180 276 112 43 chr10 6478486 6478602 -133838163 + MIR3 SINE MIR 51 174 -34 306 0 0 0 chr10 6481252 6481286 -133835479 + (T)n Simple_repeat Simple_repeat 1 34 0 501 230 146 34 chr10 6481633 6481872 -133834893 + L1ME1 LINE L1 5901 6166 0 31 0 0 0 chr10 6482172 6482203 -133834562 + AT_rich Low_complexity Low_complexity 1 31 0 1818 131 18 4 chr10 6482205 6482508 -133834257 + AluSx SINE Alu 3 309 0 230 337 0 0 chr10 6482561 6482644 -133834121 + L1ME LINE L1 5476 5558 -563 210 191 0 0 chr10 6482663 6482710 -133834055 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3686 181 9 13 chr10 6482991 6483665 -133833100 + LTR51 LTR ERV1 1 671 0 226 331 106 7 chr10 6483781 6483923 -133832842 + L2 LINE L2 2255 2410 -904 220 323 24 24 chr10 6484150 6484317 -133832448 + L2 LINE L2 2892 3058 -214 597 252 38 0 chr10 6485095 6485254 -133831511 + MIR SINE MIR 98 262 0 273 29 0 0 chr10 6485552 6485586 -133831179 + (TTATG)n Simple_repeat Simple_repeat 1 34 0 2271 85 4 0 chr10 6485586 6485905 -133830860 - AluSx SINE Alu 0 320 1 1656 154 45 45 chr10 6486831 6487117 -133829648 + AluJo SINE Alu 1 286 -26 23 68 0 0 chr10 6487122 6487166 -133829599 + AT_rich Low_complexity Low_complexity 1 44 0 241 265 56 104 chr10 6487901 6488102 -133828663 - MIR SINE MIR -42 220 30 290 115 0 19 chr10 6488897 6488949 -133827816 - MADE1 DNA Mariner 0 80 30 975 125 0 0 chr10 6488959 6489087 -133827678 + AluSq/x SINE Alu 1 128 -184 415 39 0 0 chr10 6489100 6489152 -133827613 - MADE1 DNA Mariner -28 52 1 322 250 48 0 chr10 6489701 6489785 -133826980 + MIR SINE MIR 175 262 0 192 77 0 0 chr10 6489932 6489958 -133826807 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 297 277 162 41 chr10 6489976 6490822 -133825943 - L2 LINE L2 -40 3273 2329 1610 238 65 99 chr10 6491222 6491941 -133824824 + LTR34 LTR ERV1 1 695 -4 434 219 10 146 chr10 6493342 6493534 -133823231 + MIR SINE MIR 61 226 -36 479 241 84 12 chr10 6494721 6494887 -133821878 + MER5A DNA MER1_type 6 183 -6 944 164 77 24 chr10 6494978 6495186 -133821579 + MER20 DNA MER1_type 1 219 0 419 310 29 17 chr10 6495494 6495668 -133821097 - MIR3 SINE MIR -23 185 10 183 121 61 0 chr10 6496509 6496542 -133820223 + MER5C DNA MER1_type 289 323 -1 1413 125 128 76 chr10 6496666 6496872 -133819893 - L1MC1 LINE L1 0 6333 6102 2246 104 3 0 chr10 6496872 6497160 -133819605 - AluSx SINE Alu -23 289 1 1413 125 128 76 chr10 6497160 6497281 -133819484 - L1MC1 LINE L1 -231 6102 5989 340 360 91 28 chr10 6497300 6497664 -133819101 + L1MB3 LINE L1 4745 5131 -1015 22 0 0 0 chr10 6497744 6497766 -133818999 + AT_rich Low_complexity Low_complexity 1 22 0 242 205 36 36 chr10 6497771 6497854 -133818911 + L1MB3 LINE L1 5296 5378 -786 471 266 86 9 chr10 6497897 6498170 -133818595 + MER46C DNA MER2_type 1 327 -11 361 310 13 7 chr10 6498214 6498369 -133818396 + L1MB3 LINE L1 5657 5812 -309 339 44 0 0 chr10 6498431 6498476 -133818289 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 312 50 28 chr10 6498627 6498768 -133817997 - MIR SINE MIR -50 212 69 359 179 51 13 chr10 6499167 6499245 -133817520 + MER65B LTR ERV1 1 81 -450 317 258 31 0 chr10 6501063 6501160 -133815605 - MIR SINE MIR -62 146 47 195 42 0 0 chr10 6502445 6502469 -133814296 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1629 105 113 4 chr10 6502472 6502711 -133814054 - AluSx SINE Alu -31 281 17 2834 120 19 1 chr10 6502942 6503416 -133813349 + MER1A DNA MER1_type 1 529 0 542 299 54 50 chr10 6503533 6503831 -133812934 - L3 LINE CR1 -178 1399 1101 4027 191 24 3 chr10 6503876 6504658 -133812107 - L1MB3 LINE L1 -3 6180 5382 421 342 134 23 chr10 6504660 6505136 -133811629 - L3 LINE CR1 -461 1116 588 219 388 109 0 chr10 6505197 6505362 -133811403 - L3 LINE CR1 -1099 478 296 * 228 317 100 22 chr10 6505358 6505588 -133811177 - L3b LINE CR1 -205 1378 1131 234 306 0 0 chr10 6505818 6505880 -133810885 + MIR SINE MIR 86 147 -61 249 33 0 0 chr10 6507039 6507069 -133809696 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2157 110 10 3 chr10 6508290 6508581 -133808184 - AluSg SINE Alu -15 295 3 393 254 49 78 chr10 6508934 6509053 -133807712 - MIR SINE MIR -32 230 118 1772 199 8 18 chr10 6509053 6509394 -133807371 + L1MB3 LINE L1 5795 6133 -50 2136 109 27 3 chr10 6509394 6509688 -133807077 + AluSg SINE Alu 1 301 -9 1772 199 8 18 chr10 6509688 6509738 -133807027 + L1MB3 LINE L1 6133 6182 -1 393 254 49 78 chr10 6509738 6509823 -133806942 - MIR SINE MIR -144 118 32 5976 25 6 0 chr10 6510130 6510820 -133805945 - L1PA3 LINE L1 -1725 4421 3728 8506 21 1 0 chr10 6510820 6512556 -133804209 + L1PA3 LINE L1 4415 6152 -3 471 81 0 0 chr10 6513179 6513241 -133803524 - MADE1 DNA Mariner -1 79 18 3725 172 29 38 chr10 6513247 6513288 -133803477 - L1MB2 LINE L1 -1 6170 6130 2239 98 0 19 chr10 6513288 6513595 -133803170 - AluSx SINE Alu -11 301 1 3725 172 29 38 chr10 6513595 6513945 -133802820 - L1MB2 LINE L1 -41 6130 5778 2021 154 0 0 chr10 6513945 6514237 -133802528 - AluSx SINE Alu -20 292 1 3725 172 29 38 chr10 6514237 6514617 -133802148 - L1MB2 LINE L1 -393 5778 5405 5725 127 4 8 chr10 6514658 6515046 -133801719 - L1PA13 LINE L1 -1 6162 5774 2517 70 3 13 chr10 6515046 6515359 -133801406 - AluY SINE Alu -1 310 1 5725 127 4 8 chr10 6515359 6515868 -133800897 - L1PA13 LINE L1 -389 5774 5263 1772 180 7 10 chr10 6516124 6516430 -133800335 - AluJb SINE Alu -7 305 1 1689 199 119 11 chr10 6516430 6516892 -133799873 - Charlie1b DNA MER1_type -11 512 1 1776 144 0 0 chr10 6516918 6517181 -133799584 + AluJb SINE Alu 48 310 -2 252 284 22 0 chr10 6517225 6517302 -133799463 + CT-rich Low_complexity Low_complexity 3 137 0 303 336 14 14 chr10 6517310 6517453 -133799312 - L1ME LINE L1 -461 5709 5567 386 129 16 0 chr10 6517738 6517800 -133798965 + MIR SINE MIR 81 143 -65 3160 134 87 0 chr10 6518407 6518935 -133797830 + L1PA16 LINE L1 5592 6165 -1 1925 153 3 7 chr10 6519395 6519703 -133797062 + AluSx SINE Alu 5 311 -1 1872 166 0 7 chr10 6519824 6520119 -133796646 + AluJo SINE Alu 14 306 -6 1128 145 128 4 chr10 6520123 6520358 -133796407 + L1MB4 LINE L1 5917 6180 0 202 331 75 23 chr10 6520427 6520560 -133796205 + L2 LINE L2 1278 1417 -1897 2186 110 14 0 chr10 6523031 6523322 -133793443 - AluSx SINE Alu -17 295 1 584 147 10 0 chr10 6523499 6523601 -133793164 - L1MA4A LINE L1 -2 6301 6199 223 290 27 98 chr10 6523603 6523786 -133792979 + L2 LINE L2 3143 3312 -1 2345 98 0 0 chr10 6524421 6524717 -133792048 + AluY SINE Alu 1 296 -15 1806 168 10 7 chr10 6524766 6525063 -133791702 + AluJb SINE Alu 15 312 0 661 268 172 0 chr10 6526358 6526567 -133790198 + MIR SINE MIR 18 262 0 369 232 24 32 chr10 6527394 6527519 -133789246 - L2 LINE L2 -7 3265 3142 517 176 18 115 chr10 6528280 6528445 -133788320 + MLT1F LTR MaLR 388 536 -6 1609 139 78 20 chr10 6531614 6531909 -133784856 + AluSx SINE Alu 1 312 0 21 57 0 0 chr10 6532107 6532142 -133784623 + AT_rich Low_complexity Low_complexity 1 35 0 2347 88 0 3 chr10 6532164 6532461 -133784304 - AluY SINE Alu -15 296 1 349 288 45 45 chr10 6532789 6532921 -133783844 - L2 LINE L2 0 3313 3182 2327 112 0 0 chr10 6534214 6534518 -133782247 - AluSx SINE Alu -8 304 1 1812 163 7 0 chr10 6535192 6535518 -133781247 + AluSx SINE Alu 6 333 0 6049 85 7 7 chr10 6535890 6536703 -133780062 - L1PA10 LINE L1 -4 6164 5352 520 243 132 0 chr10 6536743 6536879 -133779886 + MER112 DNA MER1_type 97 250 -10 1811 146 17 3 chr10 6537498 6537785 -133778980 + AluJb SINE Alu 1 291 -21 462 254 0 9 chr10 6538068 6538182 -133778583 - MER94 DNA DNA -18 116 4 370 243 76 35 chr10 6538634 6538778 -133777987 - L2 LINE L2 -3 3310 3161 3650 192 21 11 chr10 6539375 6539425 -133777340 + L1MB3 LINE L1 5446 5494 -689 2370 98 0 0 chr10 6539425 6539720 -133777045 + AluSc SINE Alu 3 297 -12 3650 192 21 11 chr10 6539720 6540398 -133776367 + L1MB3 LINE L1 5494 6181 -2 507 238 33 50 chr10 6540423 6540604 -133776161 + MIR SINE MIR 14 191 -71 22 0 0 0 chr10 6540712 6540734 -133776031 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr10 6541204 6541228 -133775537 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 6543843 6543871 -133772894 + GC_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr10 6543951 6544001 -133772764 + GC_rich Low_complexity Low_complexity 1 50 0 2075 134 7 0 chr10 6544933 6545225 -133771540 + AluSx SINE Alu 1 294 -18 195 225 0 0 chr10 6545606 6545646 -133771119 + L2 LINE L2 3262 3301 -12 1860 161 0 23 chr10 6546002 6546307 -133770458 - AluJo SINE Alu -14 298 1 453 272 23 46 chr10 6546315 6546488 -133770277 - MIR SINE MIR -55 207 39 2279 92 3 16 chr10 6546526 6546830 -133769935 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 6548196 6548221 -133768544 + (A)n Simple_repeat Simple_repeat 1 25 0 448 320 39 43 chr10 6548481 6548737 -133768028 - MIR SINE MIR 0 262 8 315 0 0 0 chr10 6549779 6549814 -133766951 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 48 0 0 chr10 6550644 6550686 -133766079 + AT_rich Low_complexity Low_complexity 1 42 0 560 251 49 0 chr10 6551005 6551168 -133765597 - MIR SINE MIR -51 211 41 252 59 0 0 chr10 6551297 6551331 -133765434 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr10 6551433 6551455 -133765310 + AT_rich Low_complexity Low_complexity 1 22 0 1470 258 107 24 chr10 6552679 6553275 -133763490 + L1ME3A LINE L1 5504 6163 -7 200 252 0 75 chr10 6553584 6553691 -133763074 + CT-rich Low_complexity Low_complexity 1 99 0 2451 122 13 5 chr10 6554149 6554535 -133762230 + L1PB1 LINE L1 5763 6151 0 344 284 20 0 chr10 6555573 6555675 -133761090 + MIR3 SINE MIR 59 162 -46 428 276 16 16 chr10 6557523 6557646 -133759119 + L2 LINE L2 3191 3313 0 748 230 45 6 chr10 6557947 6558125 -133758640 - MLT1E2 LTR MaLR 0 626 442 465 299 5 45 chr10 6558335 6558536 -133758229 + L1ME1 LINE L1 5866 6058 -108 207 0 0 0 chr10 6558546 6558569 -133758196 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1598 132 21 24 chr10 6558591 6558879 -133757886 - L1MA8 LINE L1 -24 6267 5981 412 231 78 25 chr10 6558903 6559023 -133757742 + L1ME2 LINE L1 6045 6178 0 559 189 0 0 chr10 6559115 6559210 -133757555 - L1MB1 LINE L1 -18 6150 6056 281 310 90 19 chr10 6560457 6560612 -133756153 - MIR SINE MIR -73 189 24 3057 153 53 24 chr10 6561016 6561636 -133755129 - L1MA8 LINE L1 -2 6289 5652 1077 182 81 4 chr10 6562217 6562464 -133754301 - L1MA4 LINE L1 -2 6298 6033 1447 127 115 44 chr10 6562464 6562822 -133753943 + MSTA LTR MaLR 1 428 0 228 111 22 0 chr10 6562822 6562867 -133753898 - L1MA4 LINE L1 -263 6037 5992 497 305 69 59 chr10 6563278 6563472 -133753293 - LTR16C LTR ERVL -2 489 289 2082 87 128 42 chr10 6563472 6563807 -133752958 - THE1B LTR MaLR 0 364 1 497 305 69 59 chr10 6563807 6563917 -133752848 - LTR16C LTR ERVL -202 289 182 392 248 16 48 chr10 6564110 6564235 -133752530 - MER117 DNA MER1_type -74 123 3 3528 151 0 6 chr10 6564849 6565378 -133751387 - MER1A DNA MER1_type -1 526 1 216 0 0 0 chr10 6565647 6565671 -133751094 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 393 325 12 30 chr10 6567426 6567595 -133749170 + LTR67 LTR ERVL 389 554 -3 207 0 0 0 chr10 6567910 6567933 -133748832 + (TG)n Simple_repeat Simple_repeat 1 23 0 409 353 22 27 chr10 6568144 6568552 -133748213 + ERVL LTR ERVL 904 1309 -4455 1384 169 98 128 chr10 6568579 6569087 -133747678 - MLT1D LTR MaLR 0 505 13 2476 69 3 0 chr10 6569320 6569623 -133747142 - AluY SINE Alu -7 304 1 227 186 85 0 chr10 6570211 6570270 -133746495 - MIR SINE MIR -2 260 197 2251 88 0 16 chr10 6570270 6570578 -133746187 - AluY SINE Alu -4 307 5 384 265 20 0 chr10 6570816 6570914 -133745851 - MIR SINE MIR -79 129 30 204 324 40 85 chr10 6572083 6572355 -133744410 - L2 LINE L2 -120 3152 2893 182 267 0 33 chr10 6572462 6572522 -133744243 - MIR SINE MIR -35 227 170 789 278 12 0 chr10 6573163 6573336 -133743429 - MER45A DNA AcHobo -1 177 3 195 330 33 0 chr10 6573606 6573697 -133743068 - L3b LINE CR1 -200 1383 1290 354 325 156 50 chr10 6574027 6574482 -133742283 - L2 LINE L2 -3 3310 2808 1221 249 291 29 chr10 6574533 6575163 -133741602 + LTR50 LTR ERVL 1 795 0 409 274 70 35 chr10 6575179 6575380 -133741385 - L2 LINE L2 -843 2471 2264 206 306 51 0 chr10 6575390 6575488 -133741277 - L2 LINE L2 -1223 2091 1989 4616 173 46 20 chr10 6575490 6576858 -133739907 + L1MB8 LINE L1 4768 6176 -2 2097 134 47 33 chr10 6577376 6577735 -133739030 + THE1B LTR MaLR 1 364 0 4530 108 14 47 chr10 6578165 6578908 -133737857 - L1PB1 LINE L1 -2 6149 5432 6669 224 67 103 chr10 6578910 6580404 -133736361 + Charlie6 DNA MER1_type 83 1630 -1870 519 270 0 0 chr10 6580404 6580519 -133736246 + FLAM_A SINE Alu 2 116 -17 2219 60 3 7 chr10 6580520 6580804 -133735961 - L1PA5 LINE L1 -3 6151 5869 1306 138 0 0 chr10 6580809 6581012 -133735753 + AluSg/x SINE Alu 103 305 -5 6669 224 67 103 chr10 6581012 6581838 -133734927 + Charlie6 DNA MER1_type 1634 2521 -979 1125 215 80 10 chr10 6581871 6582159 -133734606 - L1MCa LINE L1 -6075 351 44 236 30 30 0 chr10 6582171 6582204 -133734561 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6582331 6582953 -133733812 - MER41B LTR ERV1 0 635 1 1565 174 41 0 chr10 6584345 6584638 -133732127 - AluJo SINE Alu -7 305 1 323 325 8 8 chr10 6585670 6585796 -133730969 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6585941 6585969 -133730796 + (T)n Simple_repeat Simple_repeat 1 28 0 343 296 44 44 chr10 6586228 6586363 -133730402 + L2 LINE L2 3138 3272 0 2151 126 0 0 chr10 6588017 6588319 -133728446 - AluSx SINE Alu -2 310 9 2400 77 7 0 chr10 6588342 6588652 -133728113 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6588709 6588722 -133728043 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6588722 6588767 -133727998 + (CA)n Simple_repeat Simple_repeat 2 46 0 254 294 105 46 chr10 6588846 6588999 -133727766 - MIR3 SINE MIR -6 202 41 380 360 105 14 chr10 6589189 6589475 -133727290 + L1M4 LINE L1 3613 3924 -2222 2062 92 44 0 chr10 6589506 6589801 -133726964 + AluSg SINE Alu 2 309 -1 429 265 158 15 chr10 6589830 6590026 -133726739 + MLT1J2 LTR MaLR 111 334 -116 1013 112 0 7 chr10 6590481 6590624 -133726141 - AluSq/x SINE Alu -162 151 10 963 178 108 91 chr10 6590658 6590944 -133725821 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6590953 6590974 -133725791 + AT_rich Low_complexity Low_complexity 1 21 0 796 125 0 76 chr10 6590980 6591124 -133725641 - FLAM_C SINE Alu 0 143 11 1214 173 105 85 chr10 6591158 6591453 -133725312 - AluJo SINE Alu -1 301 1 566 299 35 53 chr10 6591638 6591956 -133724809 - L1MEd LINE L1 -5397 722 411 913 209 0 0 chr10 6591998 6592170 -133724595 - FAM SINE Alu -3 172 1 1358 225 55 55 chr10 6592846 6593268 -133723497 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6593280 6593337 -133723428 + (CA)n Simple_repeat Simple_repeat 2 57 0 278 57 0 0 chr10 6593337 6593372 -133723393 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6593472 6593589 -133723176 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6593740 6594111 -133722654 + MSTD LTR MaLR 7 396 0 2056 122 0 10 chr10 6594203 6594507 -133722258 + AluSx SINE Alu 1 301 -11 649 218 40 111 chr10 6594874 6595254 -133721511 + L1MC5 LINE L1 7340 7692 -269 376 132 0 0 chr10 6595255 6595308 -133721457 + Alu SINE Alu 2 54 -246 1628 134 0 50 chr10 6595309 6595592 -133721173 + AluSx SINE Alu 12 280 -32 515 268 82 10 chr10 6595628 6595822 -133720943 + L1MC5 LINE L1 7678 7885 -76 2065 114 16 0 chr10 6597444 6597750 -133719015 + AluSx SINE Alu 1 311 -1 3082 251 77 28 chr10 6598405 6599402 -133717363 + MER97b DNA MER1_type? 1 1046 -7 344 362 60 0 chr10 6599613 6599762 -133717003 + L2 LINE L2 3114 3271 -1 863 277 74 38 chr10 6600256 6600729 -133716036 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6601251 6601365 -133715400 - MER41B LTR ERV1 0 635 516 251 218 39 26 chr10 6601369 6601447 -133715318 - L1MC5 LINE L1 -519 7442 7364 1982 131 13 7 chr10 6601452 6601758 -133715007 - AluSx SINE Alu -4 308 1 350 305 135 10 chr10 6602124 6602324 -133714441 + LTR16A LTR ERVL 1 225 -225 1815 134 62 0 chr10 6602443 6602735 -133714030 - AluSx SINE Alu -2 310 1 187 286 0 0 chr10 6604966 6605008 -133711757 + L2 LINE L2 3256 3297 -16 192 210 210 16 chr10 6605022 6605084 -133711681 - L2 LINE L2 -9 3304 3231 3174 149 28 0 chr10 6605084 6605593 -133711172 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6605606 6605669 -133711096 + AT_rich Low_complexity Low_complexity 1 63 0 2003 125 3 10 chr10 6605889 6606192 -133710573 + AluJb SINE Alu 1 301 -11 1259 193 120 7 chr10 6606422 6606697 -133710068 - AluJb SINE Alu -6 306 1 267 231 39 0 chr10 6606927 6606979 -133709786 - MLT1K LTR MaLR -357 231 178 417 320 80 75 chr10 6607154 6607607 -133709158 + L2 LINE L2 449 903 -2411 229 297 94 80 chr10 6607608 6607746 -133709019 + L2 LINE L2 1083 1222 -2092 1239 310 98 41 chr10 6607828 6609007 -133707758 + L2 LINE L2 2056 3308 -5 1310 201 21 49 chr10 6609093 6609381 -133707384 - MLT2B1 LTR ERVL -8 512 233 1400 198 52 7 chr10 6609680 6609968 -133706797 + L1M3 LINE L1 5443 5743 -437 2583 145 9 53 chr10 6609968 6610403 -133706362 + L1MB3 LINE L1 5679 6089 -94 1957 124 0 10 chr10 6610403 6610702 -133706063 - AluSx SINE Alu -16 296 1 2583 145 9 53 chr10 6610702 6610791 -133705974 + L1MB3 LINE L1 6089 6180 -3 1664 170 3 14 chr10 6610942 6611236 -133705529 - AluSx SINE Alu -21 291 1 366 296 53 29 chr10 6611926 6612080 -133704685 + MER109 Unknown Unknown 531 695 -1737 2318 96 11 20 chr10 6612080 6612435 -133704330 + L1PA10 LINE L1 5817 6168 0 366 296 53 29 chr10 6612435 6612523 -133704242 + MER109 Unknown Unknown 695 779 -1653 239 286 12 36 chr10 6612607 6612691 -133704074 + MER109 Unknown Unknown 536 617 -1815 2605 217 65 74 chr10 6612875 6613757 -133703008 + MER109 Unknown Unknown 535 1408 -1024 209 276 0 0 chr10 6614982 6615040 -133701725 + T-rich Low_complexity Low_complexity 2 59 0 703 144 17 8 chr10 6615645 6615763 -133701002 - FLAM_C SINE Alu -18 125 7 1309 140 4 13 chr10 6615892 6616121 -133700644 - AluJb SINE Alu 0 312 86 2174 58 0 42 chr10 6616425 6616734 -133700031 - AluY SINE Alu -15 296 1 436 244 151 8 chr10 6616752 6616871 -133699894 + MER5B DNA MER1_type 1 136 -42 261 152 0 22 chr10 6616976 6617022 -133699743 + MER20 DNA MER1_type 100 144 -75 495 167 0 0 chr10 6617022 6617112 -133699653 + GA-rich Low_complexity Low_complexity 1 90 0 266 146 83 0 chr10 6617112 6617160 -133699605 - AluJ/FRAM SINE Alu -20 282 231 195 260 120 0 chr10 6617168 6617218 -133699547 + MER5B DNA MER1_type 123 178 0 187 265 98 78 chr10 6617236 6617276 -133699489 - L2 LINE L2 -22 3291 3253 1419 195 54 41 chr10 6617276 6617645 -133699120 + MLT1A2 LTR MaLR 1 374 0 187 265 98 78 chr10 6617645 6617706 -133699059 - L2 LINE L2 -60 3253 3188 1968 128 0 7 chr10 6617846 6618164 -133698601 + AluSx SINE Alu 1 312 0 1344 146 24 0 chr10 6618384 6618596 -133698169 + MER20 DNA MER1_type 1 217 -2 222 368 105 0 chr10 6618626 6618740 -133698025 - MIR SINE MIR -77 185 60 254 206 0 44 chr10 6619434 6619485 -133697280 - MLT2B1 LTR ERVL 0 520 471 2334 120 52 14 chr10 6619485 6619834 -133696931 - THE1B LTR MaLR 0 364 3 254 206 0 44 chr10 6619834 6619850 -133696915 - MLT2B1 LTR ERVL -49 471 456 1360 201 99 43 chr10 6619903 6620299 -133696466 - MLT2B1 LTR ERVL -37 377 4 934 177 6 6 chr10 6620441 6620605 -133696160 + MER3 DNA MER1_type 41 204 -5 527 231 0 0 chr10 6620838 6620942 -133695823 - L2 LINE L2 0 3272 3169 228 260 260 0 chr10 6621017 6621113 -133695652 - L2 LINE L2 -5 3308 3188 363 291 64 71 chr10 6621168 6621204 -133695561 - MIR SINE MIR -75 187 152 2056 110 7 7 chr10 6621204 6621503 -133695262 - AluSg SINE Alu -11 299 1 363 291 64 71 chr10 6621503 6621607 -133695158 - MIR SINE MIR -110 152 48 237 98 0 0 chr10 6622303 6622344 -133694421 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 1469 163 64 34 chr10 6622348 6622371 -133694394 - AluJb SINE Alu -8 304 283 437 0 0 19 chr10 6622371 6622425 -133694340 + (TCTCC)n Simple_repeat Simple_repeat 2 54 0 1469 163 64 34 chr10 6622425 6622696 -133694069 - AluJb SINE Alu -29 283 1 1218 188 125 15 chr10 6622705 6622977 -133693788 - AluJo SINE Alu 0 302 1 22 35 0 0 chr10 6623175 6623204 -133693561 + AT_rich Low_complexity Low_complexity 1 29 0 441 280 159 5 chr10 6623374 6623563 -133693202 + MLT1I LTR MaLR 186 403 -6 208 191 132 29 chr10 6623633 6623701 -133693064 + L3b LINE CR1 1263 1337 -246 364 322 60 38 chr10 6623753 6623936 -133692829 + MIR SINE MIR 21 207 -55 306 197 26 0 chr10 6623997 6624114 -133692651 + (TA)n Simple_repeat Simple_repeat 2 121 0 303 327 28 19 chr10 6624152 6624259 -133692506 - L1MC4 LINE L1 -1331 6711 6604 369 324 93 0 chr10 6625305 6625487 -133691278 - L2 LINE L2 -420 2894 2696 3221 152 9 12 chr10 6625497 6626055 -133690710 + L1MB3 LINE L1 5587 6142 -41 1829 133 3 63 chr10 6626055 6626370 -133690395 + AluSx SINE Alu 1 296 -16 227 189 0 0 chr10 6626370 6626423 -133690342 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 299 96 19 0 chr10 6626423 6626475 -133690290 + L1MB3 LINE L1 6131 6183 0 247 284 30 113 chr10 6626478 6626946 -133689819 - L2 LINE L2 -620 2694 2266 442 173 6 0 chr10 6627179 6627259 -133689506 + L1MA7 LINE L1 5857 5940 -240 1371 105 10 29 chr10 6627260 6627469 -133689296 - AluSg/x SINE Alu -9 301 97 1525 183 39 39 chr10 6627470 6627825 -133688940 + L1MA7 LINE L1 5935 6289 -2 2187 111 17 0 chr10 6628506 6628804 -133687961 + AluSx SINE Alu 3 305 -7 341 356 8 0 chr10 6629398 6629516 -133687249 + (TG)n Simple_repeat Simple_repeat 2 120 0 660 240 121 96 chr10 6630465 6630944 -133685821 + MLT1J LTR MaLR 1 491 -20 1256 103 0 11 chr10 6631452 6631745 -133685020 + (TCCA)n Simple_repeat Simple_repeat 1 469 0 407 266 87 39 chr10 6631778 6631985 -133684780 - MIR SINE MIR -44 218 2 1700 178 16 7 chr10 6633022 6633331 -133683434 - AluJo SINE Alu 0 312 1 254 237 101 35 chr10 6635086 6635255 -133681510 + Charlie7 DNA MER1_type 2390 2569 -43 2284 91 0 0 chr10 6635275 6635562 -133681203 - AluSx SINE Alu -12 300 14 180 97 0 0 chr10 6635581 6635612 -133681153 + (A)n Simple_repeat Simple_repeat 1 31 0 1477 204 36 68 chr10 6636818 6637292 -133679473 + L1MC5 LINE L1 6726 7183 -787 348 266 65 72 chr10 6637486 6637764 -133679001 - L2 LINE L2 -190 3082 2807 312 227 0 0 chr10 6638123 6638198 -133678567 + MER53 DNA DNA 1 75 -114 341 237 68 59 chr10 6638359 6638372 -133678393 - L2 LINE L2 -13 3300 3289 495 0 0 0 chr10 6638372 6638427 -133678338 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 341 237 68 59 chr10 6638427 6638531 -133678234 - L2 LINE L2 -24 3289 3182 592 228 153 36 chr10 6638584 6638918 -133677847 + L1ME4a LINE L1 5745 6117 -4 200 333 0 0 chr10 6639000 6639063 -133677702 + MIR SINE MIR 68 130 -78 267 31 0 0 chr10 6639269 6639301 -133677464 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 250 120 28 chr10 6641194 6641302 -133675463 + MIR SINE MIR 83 200 -62 437 234 80 106 chr10 6642342 6642692 -133674073 - L1MEd LINE L1 -4869 1250 910 2889 144 214 113 chr10 6642709 6642883 -133673882 - L1 LINE L1 -1833 5273 5118 7581 26 0 4 chr10 6642883 6643900 -133672865 - L1PA3 LINE L1 0 6155 5132 2889 144 214 113 chr10 6643900 6644754 -133672011 - L1 LINE L1 -1988 5118 4141 3890 210 70 51 chr10 6644755 6645421 -133671344 - L1 LINE L1 -3024 4082 3431 471 78 0 0 chr10 6645421 6645485 -133671280 + (TA)n Simple_repeat Simple_repeat 1 64 0 3890 210 70 51 chr10 6645485 6647933 -133668832 - L1 LINE L1 -3675 3431 7 182 373 25 8 chr10 6649675 6649793 -133666972 + L2 LINE L2 2907 3026 -246 557 120 9 56 chr10 6650192 6650254 -133666511 + L1MB3 LINE L1 6081 6137 -46 1540 223 13 21 chr10 6650254 6650631 -133666134 - MLT1A2 LTR MaLR 0 374 1 557 120 9 56 chr10 6650631 6650676 -133666089 + L1MB3 LINE L1 6137 6183 0 246 216 0 0 chr10 6650703 6650754 -133666011 + L1MC4 LINE L1 6652 6702 -1340 231 114 0 0 chr10 6650761 6650796 -133665969 + (TA)n Simple_repeat Simple_repeat 1 35 0 844 213 100 108 chr10 6651585 6652092 -133664673 - MER34C LTR ERV1 -1 584 80 3057 120 5 0 chr10 6652092 6652524 -133664241 + MER57B LTR ERV1 1 434 0 844 213 100 108 chr10 6652524 6652565 -133664200 - MER34C LTR ERV1 -505 80 40 2474 134 31 24 chr10 6652911 6653336 -133663429 - MSTA LTR MaLR 0 428 1 186 376 77 0 chr10 6653816 6653933 -133662832 - MIR3 SINE MIR -29 179 54 3305 157 35 2 chr10 6654338 6654874 -133661891 + MER41C LTR ERV1 1 554 0 224 302 0 0 chr10 6655011 6655064 -133661701 - MIR SINE MIR -135 73 21 44098 29 21 1 chr10 6655607 6661639 -133655126 - L1HS LINE L1 0 6155 1 901 267 185 18 chr10 6661698 6662170 -133654595 - MLT1G1 LTR MaLR 0 595 1 450 219 203 0 chr10 6662226 6662349 -133654416 - MER5A DNA MER1_type -1 188 41 379 191 0 0 chr10 6662639 6662707 -133654058 + MER57B LTR ERV1 38 105 -329 198 356 45 15 chr10 6662828 6662960 -133653805 - L2 LINE L2 -9 3304 3169 1633 171 29 0 chr10 6663069 6663372 -133653393 - AluJo SINE Alu 0 311 1 1779 193 34 3 chr10 6663377 6663765 -133653000 - L1MA4 LINE L1 0 6300 5901 1773 164 52 27 chr10 6664168 6664533 -133652232 - THE1C LTR MaLR -1 374 1 37 0 0 0 chr10 6664615 6664652 -133652113 + AT_rich Low_complexity Low_complexity 1 37 0 745 222 0 0 chr10 6664928 6665063 -133651702 + MER63A DNA MER1_type 51 185 -25 577 207 117 0 chr10 6665067 6665178 -133651587 + AluJb SINE Alu 137 260 -52 234 330 37 28 chr10 6665260 6665369 -133651396 + L2 LINE L2 3151 3260 -12 2241 110 78 26 chr10 6665410 6665756 -133651009 - THE1B LTR MaLR 0 364 1 11980 86 14 3 chr10 6665756 6667318 -133649447 - THE1B-int LTR MaLR 0 1580 1 2267 97 69 26 chr10 6667318 6667667 -133649098 - THE1B LTR MaLR 0 364 1 1608 175 33 0 chr10 6669605 6669906 -133646859 + AluJo SINE Alu 1 310 0 216 0 0 0 chr10 6670249 6670273 -133646492 + (T)n Simple_repeat Simple_repeat 1 24 0 201 196 0 0 chr10 6672821 6672867 -133643898 + (CA)n Simple_repeat Simple_repeat 1 46 0 576 223 0 0 chr10 6672878 6673053 -133643712 + (CA)n Simple_repeat Simple_repeat 2 176 0 264 176 0 0 chr10 6673083 6673134 -133643631 - MER4-int LTR ERV1 -5436 1162 1112 546 199 0 32 chr10 6673152 6673338 -133643427 + (CA)n Simple_repeat Simple_repeat 1 180 0 2289 110 13 0 chr10 6673446 6673754 -133643011 + AluSx SINE Alu 1 312 0 395 293 93 37 chr10 6673880 6674233 -133642532 - HAL1 LINE L1 -4 2503 2095 1454 251 73 19 chr10 6674233 6674700 -133642065 - MLT1F1 LTR MaLR 0 567 76 2192 215 78 23 chr10 6674711 6675273 -133641492 - MLT1E LTR MaLR 0 593 1 330 234 138 0 chr10 6675286 6675380 -133641385 - L1MC4a LINE L1 0 7808 7731 * 4016 270 113 34 chr10 6675378 6676604 -133640161 - HAL1 LINE L1 -419 2088 652 5065 104 9 11 chr10 6676604 6677297 -133639468 + LTR8 LTR ERV1 1 691 0 4016 270 113 34 chr10 6677297 6678004 -133638761 - HAL1 LINE L1 -1855 652 2 3970 118 37 5 chr10 6678326 6678919 -133637846 - LTR9 LTR ERV1 0 612 1 879 223 72 5 chr10 6679187 6679380 -133637385 - MER58A DNA MER1_type -18 206 1 2198 94 0 16 chr10 6679539 6679846 -133636919 - AluSg SINE Alu -8 302 1 1363 129 0 53 chr10 6680907 6681028 -133635737 - LTR8 LTR ERV1 0 691 584 2567 49 0 7 chr10 6681028 6681335 -133635430 - AluY SINE Alu -6 305 1 1363 129 0 53 chr10 6681335 6681422 -133635343 - LTR8 LTR ERV1 -107 584 494 2623 87 45 6 chr10 6681430 6681787 -133634978 - LTR8 LTR ERV1 -320 371 1 4241 193 19 30 chr10 6682224 6683082 -133633683 - L1MB7 LINE L1 0 6184 5318 1947 124 32 0 chr10 6683082 6683365 -133633400 - AluSx SINE Alu -20 292 1 4241 193 19 30 chr10 6683365 6683614 -133633151 - L1MB7 LINE L1 -866 5318 5068 2221 118 3 3 chr10 6683614 6683918 -133632847 + AluSq SINE Alu 1 304 -9 4241 193 19 30 chr10 6683918 6684310 -133632455 - L1MB7 LINE L1 -1116 5068 4698 235 355 74 8 chr10 6684564 6684685 -133632080 - L2 LINE L2 -1 3271 3143 1790 140 20 43 chr10 6684714 6685014 -133631751 - AluJb SINE Alu -1 311 19 225 175 0 0 chr10 6685186 6685226 -133631539 + L2 LINE L2 3258 3297 -16 225 291 64 0 chr10 6686043 6686153 -133630612 + MIR SINE MIR 16 132 -130 291 309 50 55 chr10 6686172 6686373 -133630392 + L2 LINE L2 3107 3306 -7 233 333 11 0 chr10 6686360 6686453 -133630312 + MIR SINE MIR 130 223 -39 * 316 233 14 0 chr10 6686529 6686602 -133630163 - MER94 DNA DNA -13 121 48 620 212 8 15 chr10 6686715 6686847 -133629918 + FLAM_A SINE Alu 12 142 0 2028 169 92 43 chr10 6686929 6687374 -133629391 + LTR24 LTR ERV1 1 467 0 2200 66 38 0 chr10 6688030 6688317 -133628448 + L1PA7 LINE L1 5853 6150 -4 198 0 0 0 chr10 6688343 6688365 -133628400 + (A)n Simple_repeat Simple_repeat 1 22 0 1776 143 89 4 chr10 6688625 6688905 -133627860 + AluSg SINE Alu 1 304 -6 223 179 0 71 chr10 6689749 6689805 -133626960 + L2 LINE L2 3262 3313 0 464 86 14 0 chr10 6690189 6690259 -133626506 + (GA)n Simple_repeat Simple_repeat 2 72 0 753 125 24 18 chr10 6690339 6690507 -133626258 + CT-rich Low_complexity Low_complexity 3 171 0 909 148 0 16 chr10 6690510 6690693 -133626072 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 802 202 11 7 chr10 6690684 6690946 -133625819 + CT-rich Low_complexity Low_complexity 1 262 0 * 1885 167 13 3 chr10 6690954 6691254 -133625511 - AluSx SINE Alu -9 303 1 386 151 48 8 chr10 6693442 6693568 -133623197 + (TG)n Simple_repeat Simple_repeat 1 131 0 265 240 48 19 chr10 6693585 6693689 -133623076 + (TG)n Simple_repeat Simple_repeat 2 108 0 1603 204 54 104 chr10 6693698 6694331 -133622434 - L1MC5 LINE L1 -72 7889 7289 2188 109 10 0 chr10 6694332 6694626 -133622139 - AluSq SINE Alu -16 297 1 498 290 105 29 chr10 6694743 6695057 -133621708 - L1ME LINE L1 -397 5773 5436 2285 122 0 0 chr10 6695262 6695566 -133621199 - AluSx SINE Alu -8 304 1 298 250 43 122 chr10 6696523 6696672 -133620093 + MER20B DNA MER1_type 43 176 -43 2271 101 20 0 chr10 6696672 6696969 -133619796 + AluSx SINE Alu 1 303 -9 298 250 43 122 chr10 6696969 6697007 -133619758 + MER20B DNA MER1_type 176 215 -4 559 288 7 0 chr10 6697161 6697314 -133619451 + MIR SINE MIR 109 262 0 787 181 100 0 chr10 6697558 6697718 -133619047 + MER58A DNA MER1_type 46 221 -3 659 218 84 14 chr10 6698038 6698180 -133618585 - FRAM SINE Alu -13 153 2 420 311 73 39 chr10 6698301 6698709 -133618056 + L1M4 LINE L1 4562 4983 -1163 2487 75 0 0 chr10 6698916 6699223 -133617542 - AluY SINE Alu -4 307 1 297 0 0 0 chr10 6699446 6699479 -133617286 + (CA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 6699509 6699530 -133617235 + (CA)n Simple_repeat Simple_repeat 1 21 0 940 269 78 14 chr10 6699856 6700202 -133616563 + L1MEc LINE L1 39 406 -5990 1686 260 38 66 chr10 6700205 6700943 -133615822 + L1MEc LINE L1 613 1325 -5071 2109 134 0 0 chr10 6700943 6701234 -133615531 - AluSx SINE Alu -21 291 1 1686 260 38 66 chr10 6701234 6701363 -133615402 + L1MEc LINE L1 1325 1456 -4940 474 18 0 0 chr10 6701373 6701428 -133615337 + (TA)n Simple_repeat Simple_repeat 2 56 0 2182 113 0 10 chr10 6701718 6702018 -133614747 - AluSx SINE Alu -15 297 1 5219 90 3 4 chr10 6702189 6702899 -133613866 - L1PB2 LINE L1 -1 6150 5442 776 147 41 14 chr10 6704742 6705182 -133611583 + (TCTA)n Simple_repeat Simple_repeat 1 452 0 205 310 17 0 chr10 6705209 6705267 -133611498 + (TG)n Simple_repeat Simple_repeat 2 60 0 2068 239 95 86 chr10 6705294 6705657 -133611108 - HAL1 LINE L1 -131 2376 2018 2173 135 0 0 chr10 6705657 6705960 -133610805 - AluSx SINE Alu -9 303 1 2024 81 0 4 chr10 6705969 6706216 -133610549 - AluSg SINE Alu -22 288 43 2068 239 95 86 chr10 6706216 6707087 -133609678 - HAL1 LINE L1 -496 2011 1121 1782 181 3 0 chr10 6707176 6707468 -133609297 + AluJo SINE Alu 3 295 -17 635 211 24 0 chr10 6707468 6707591 -133609174 - MER3 DNA MER1_type -80 129 4 273 352 24 8 chr10 6708141 6708266 -133608499 - MIR SINE MIR 0 262 136 380 268 31 24 chr10 6708293 6708420 -133608345 - MIR SINE MIR -62 146 19 465 333 75 9 chr10 6708426 6708639 -133608126 + MIR SINE MIR 11 237 -25 2420 78 7 3 chr10 6711197 6711493 -133605272 - AluSg SINE Alu -13 297 1 734 144 0 24 chr10 6711664 6711789 -133604976 + FLAM_C SINE Alu 21 142 -1 260 296 167 0 chr10 6712215 6712323 -133604442 - MIR3 SINE MIR -30 178 53 25 31 0 0 chr10 6712664 6712696 -133604069 + AT_rich Low_complexity Low_complexity 1 32 0 1619 78 0 0 chr10 6712814 6713007 -133603758 - AluSq SINE Alu -120 193 1 202 274 0 16 chr10 6714701 6714763 -133602002 + GA-rich Low_complexity Low_complexity 4 64 0 1071 174 76 27 chr10 6715690 6715914 -133600851 - AluJb SINE Alu 0 312 78 1642 113 0 0 chr10 6715914 6716126 -133600639 - AluSq SINE Alu -101 212 1 271 231 141 25 chr10 6717134 6717255 -133599510 + MIR SINE MIR 51 185 -77 529 317 0 11 chr10 6717267 6717447 -133599318 + (CA)n Simple_repeat Simple_repeat 2 179 0 225 243 0 0 chr10 6717476 6717546 -133599219 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 248 128 18 chr10 6718574 6718683 -133598082 + MIR3 SINE MIR 73 193 -15 294 323 79 0 chr10 6719316 6719443 -133597322 + L2 LINE L2 3136 3272 0 236 278 33 0 chr10 6719581 6719671 -133597094 + L1PB4 LINE L1 6064 6156 0 2334 100 10 10 chr10 6719720 6720031 -133596734 + AluSx SINE Alu 1 311 -1 32 0 0 0 chr10 6720341 6720373 -133596392 + AT_rich Low_complexity Low_complexity 1 32 0 1666 57 0 0 chr10 6720887 6721080 -133595685 - AluY SINE Alu -13 298 106 1320 105 96 0 chr10 6721576 6721785 -133594980 + MER30 DNA MER1_type 1 229 -1 1764 160 3 7 chr10 6721812 6722099 -133594666 + AluJb SINE Alu 11 296 -16 453 264 16 8 chr10 6722272 6722393 -133594372 - L1MD2 LINE L1 -17 6342 6221 1431 212 67 6 chr10 6722410 6722740 -133594025 - L1MD2 LINE L1 -215 6144 5795 1471 217 47 25 chr10 6723131 6723490 -133593275 + MLT1A2 LTR MaLR 1 367 -7 2471 75 0 7 chr10 6723618 6723924 -133592841 - AluY SINE Alu -7 304 1 1775 170 0 27 chr10 6724569 6724869 -133591896 - AluJo SINE Alu -20 292 1 363 203 14 0 chr10 6725392 6725461 -133591304 - MER8 DNA MER2_type 0 239 170 * 2536 139 59 5 chr10 6725450 6725873 -133590892 + Tigger2 DNA MER2_type 2273 2718 0 2091 100 94 26 chr10 6725880 6726231 -133590534 + THE1C LTR MaLR 1 375 0 2101 116 14 3 chr10 6726678 6726970 -133589795 + AluSx SINE Alu 1 295 -17 1488 108 5 0 chr10 6727219 6727413 -133589352 - AluSp SINE Alu -118 195 1 492 191 35 43 chr10 6727428 6727543 -133589222 - FLAM_A SINE Alu -1 141 28 2286 111 0 0 chr10 6728651 6728948 -133587817 + AluSq SINE Alu 1 297 -16 1817 164 43 27 chr10 6729282 6729653 -133587112 + L1MA8 LINE L1 5639 6015 -276 943 175 18 0 chr10 6729651 6729822 -133586943 + L1MB2 LINE L1 5768 5941 -230 * 332 122 0 0 chr10 6729831 6729880 -133586885 + MADE1 DNA Mariner 26 74 -6 1306 134 29 34 chr10 6729880 6730034 -133586731 + L1MB2 LINE L1 5932 6086 -85 2083 113 48 0 chr10 6730034 6730327 -133586438 - AluSx SINE Alu -4 308 2 1306 134 29 34 chr10 6730327 6730411 -133586354 + L1MB2 LINE L1 6086 6169 -2 515 124 27 2 chr10 6730328 6730424 -133586341 + L1MB2 LINE L1 6085 6169 -2 219 146 0 0 chr10 6730663 6730704 -133586061 + (CA)n Simple_repeat Simple_repeat 2 42 0 2302 71 7 0 chr10 6730841 6731121 -133585644 + AluSx SINE Alu 29 310 -2 181 356 54 13 chr10 6732072 6732221 -133584544 - MIR SINE MIR -44 218 64 2439 91 0 3 chr10 6732329 6732637 -133584128 - AluSx SINE Alu -5 307 1 2456 74 0 3 chr10 6733098 6733395 -133583370 + AluSc SINE Alu 1 296 -13 2168 110 3 3 chr10 6734387 6734678 -133582087 - AluSc SINE Alu -18 291 1 38262 31 4 0 chr10 6734757 6740056 -133576709 + L1PA3 LINE L1 840 6155 0 242 327 135 18 chr10 6740495 6740822 -133575943 - L2 LINE L2 -817 2497 2133 683 221 25 25 chr10 6741698 6741861 -133574904 + L1MD2 LINE L1 6195 6357 -2 263 221 91 0 chr10 6742162 6742239 -133574526 - MIR SINE MIR -70 192 109 209 267 244 36 chr10 6743278 6743503 -133573262 - L3 LINE CR1 -149 1428 1157 274 266 0 0 chr10 6743503 6743567 -133573198 + L1MD2 LINE L1 6218 6281 -78 481 333 24 51 chr10 6743567 6743900 -133572865 - L3 LINE CR1 -427 1150 827 1427 203 49 7 chr10 6743919 6744205 -133572560 - AluJo SINE Alu -14 298 1 803 199 197 102 chr10 6745427 6745848 -133570917 + MLT1C LTR MaLR 4 464 -3 1990 138 3 22 chr10 6746452 6746763 -133570002 - AluSx SINE Alu -7 305 1 798 130 23 23 chr10 6746797 6747277 -133569488 + (TCCA)n Simple_repeat Simple_repeat 1 480 0 2092 134 0 0 chr10 6748694 6748992 -133567773 + AluSx SINE Alu 1 298 -14 289 312 98 17 chr10 6749171 6749344 -133567421 + L3b LINE CR1 1287 1473 -110 2125 126 7 0 chr10 6750417 6750719 -133566046 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6752876 6753014 -133563751 + MIR SINE MIR 47 203 -59 1010 87 0 6 chr10 6753268 6753429 -133563336 + (GA)n Simple_repeat Simple_repeat 1 160 0 277 219 68 14 chr10 6753659 6753732 -133563033 + MIR SINE MIR 68 144 -64 700 192 8 0 chr10 6753900 6754020 -133562745 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6754925 6754988 -133561777 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6755071 6755321 -133561444 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6755318 6755395 -133561370 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6755656 6755747 -133561018 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6755800 6755910 -133560855 + L1MC1 LINE L1 5792 5904 -429 1930 114 88 0 chr10 6756640 6756913 -133559852 + AluSx SINE Alu 1 297 -15 2223 108 3 32 chr10 6757432 6757772 -133558993 + AluSx SINE Alu 1 312 0 2503 76 0 0 chr10 6757998 6758302 -133558463 + AluY SINE Alu 1 304 -7 1512 228 198 92 chr10 6758476 6758678 -133558087 + LTR24B LTR ERV1 1 180 -455 2179 114 7 3 chr10 6758678 6758984 -133557781 - AluSq SINE Alu -6 307 1 1512 228 198 92 chr10 6758984 6759356 -133557409 + LTR24B LTR ERV1 180 635 0 1061 24 87 0 chr10 6762009 6762136 -133554629 - MER85 DNA T2_type -1 138 1 336 303 30 0 chr10 6762559 6762691 -133554074 - L1ME LINE L1 -297 5824 5689 252 323 152 0 chr10 6763217 6763316 -133553449 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6763557 6763886 -133552879 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6764237 6764365 -133552400 + L1ME4a LINE L1 5975 6121 0 2075 102 3 71 chr10 6765619 6765941 -133550824 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6766468 6766639 -133550126 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6767943 6768014 -133548751 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6768124 6768286 -133548479 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6768289 6768413 -133548352 + FLAM_A SINE Alu 1 127 -15 971 208 9 28 chr10 6768418 6768612 -133548153 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6768612 6768969 -133547796 - THE1B LTR MaLR 0 364 1 971 208 9 28 chr10 6768969 6768990 -133547775 + MLT1B LTR MaLR 370 390 0 1747 170 3 7 chr10 6770103 6770403 -133546362 + AluSx SINE Alu 1 299 -13 456 216 32 64 chr10 6771757 6771882 -133544883 - MER91C DNA MER1_type -19 121 1 2379 91 0 0 chr10 6772330 6772638 -133544127 - AluY SINE Alu -3 308 1 228 272 39 29 chr10 6774130 6774233 -133542532 - MIR SINE MIR -50 212 109 195 139 0 0 chr10 6774698 6774734 -133542031 + (ATG)n Simple_repeat Simple_repeat 3 38 0 246 62 0 0 chr10 6775304 6775336 -133541429 + (TA)n Simple_repeat Simple_repeat 1 32 0 1593 167 15 11 chr10 6775689 6775953 -133540812 - AluJo SINE Alu -47 265 1 318 50 0 0 chr10 6776760 6776800 -133539965 + (CTATT)n Simple_repeat Simple_repeat 4 43 0 1688 160 0 80 chr10 6776806 6777119 -133539646 - AluJo SINE Alu -24 288 1 1826 161 0 55 chr10 6777120 6777450 -133539315 - AluSx SINE Alu 0 312 1 658 259 93 22 chr10 6777999 6778277 -133538488 - L1M4 LINE L1 -2147 3999 3702 1768 133 19 70 chr10 6778616 6778744 -133538021 + AluJb SINE Alu 1 134 -178 2329 57 4 0 chr10 6778744 6779024 -133537741 + AluY SINE Alu 1 281 -30 1768 133 19 70 chr10 6779024 6779211 -133537554 + AluJb SINE Alu 134 300 -12 239 218 119 50 chr10 6779503 6779604 -133537161 + MIR SINE MIR 72 179 -83 22 35 0 0 chr10 6779791 6779820 -133536945 + AT_rich Low_complexity Low_complexity 1 29 0 959 90 0 7 chr10 6779829 6779974 -133536791 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 242 36 0 0 chr10 6779987 6780015 -133536750 + (A)n Simple_repeat Simple_repeat 1 28 0 235 198 28 38 chr10 6782877 6782983 -133533782 + GA-rich Low_complexity Low_complexity 4 108 0 2422 81 0 0 chr10 6783145 6783442 -133533323 - AluSg SINE Alu -13 297 1 204 97 0 0 chr10 6784070 6784101 -133532664 + (A)n Simple_repeat Simple_repeat 1 31 0 2733 232 58 8 chr10 6784321 6785474 -133531291 - L1ME LINE L1 -392 6052 4843 548 208 87 11 chr10 6785482 6785672 -133531093 - L1MDa LINE L1 -4755 1671 1357 22 0 0 0 chr10 6785728 6785750 -133531015 + AT_rich Low_complexity Low_complexity 1 22 0 1178 87 6 0 chr10 6786059 6786232 -133530533 + (TCTCC)n Simple_repeat Simple_repeat 2 175 0 216 0 0 0 chr10 6787089 6787113 -133529652 + (TG)n Simple_repeat Simple_repeat 1 24 0 1078 246 54 81 chr10 6788642 6789175 -133527590 - MER34 LTR ERV1 -23 519 1 1500 218 89 17 chr10 6790491 6790839 -133525926 + MLT1A2 LTR MaLR 1 373 -1 882 207 0 17 chr10 6790871 6791045 -133525720 + FRAM SINE Alu 1 170 -6 911 150 0 0 chr10 6791413 6791533 -133525232 + AluSq/x SINE Alu 1 123 -190 243 0 0 0 chr10 6791533 6791560 -133525205 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 911 150 0 0 chr10 6791560 6791572 -133525193 + AluSq/x SINE Alu 122 133 -180 1939 150 31 0 chr10 6792057 6792351 -133524414 - AluSx SINE Alu -9 303 1 623 225 0 47 chr10 6792379 6792508 -133524257 - FLAM_A SINE Alu -10 123 1 40 37 0 0 chr10 6793098 6793152 -133523613 + AT_rich Low_complexity Low_complexity 1 54 0 2458 54 0 7 chr10 6793267 6793563 -133523202 - AluY SINE Alu -17 294 1 187 349 58 41 chr10 6793606 6793778 -133522987 - MIR SINE MIR -56 206 32 339 345 22 36 chr10 6793807 6793946 -133522819 + MIR SINE MIR 5 141 -121 1971 208 84 2 chr10 6793998 6794440 -133522325 - MER70B LTR ERVL -100 478 1 222 203 47 47 chr10 6795593 6795657 -133521108 + MIR SINE MIR 199 262 0 1555 218 49 16 chr10 6796701 6797068 -133519697 - MLT1B LTR MaLR 0 390 12 414 267 75 43 chr10 6797073 6797241 -133519524 + MLT1I LTR MaLR 14 190 -219 2087 127 73 17 chr10 6797241 6797596 -133519169 + THE1C LTR MaLR 1 375 0 414 267 75 43 chr10 6797596 6797614 -133519151 + MLT1I LTR MaLR 190 206 -203 2171 96 0 17 chr10 6797630 6797921 -133518844 + AluSx SINE Alu 1 286 -26 318 26 0 0 chr10 6797924 6797963 -133518802 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 232 241 84 0 chr10 6798018 6798101 -133518664 + LTR66 LTR ERVL 352 441 -169 808 95 9 0 chr10 6798151 6798256 -133518509 - AluSg/x SINE Alu -17 295 190 7624 54 2 2 chr10 6798399 6799545 -133517220 + L1PA5 LINE L1 5008 6154 0 225 323 0 0 chr10 6800482 6800544 -133516221 + MIR3 SINE MIR 119 180 -28 11206 87 18 39 chr10 6800759 6803090 -133513675 - HERVH LTR ERV1 -5552 2161 1 3585 67 5 7 chr10 6803092 6803541 -133513224 - LTR7 LTR ERV1 -2 448 1 1011 265 75 131 chr10 6804225 6805150 -133511615 + Charlie2b DNA MER1_type 45 917 -1865 838 258 116 7 chr10 6805152 6805427 -133511338 - MLT1E3 LTR MaLR -3 621 317 622 60 66 18 chr10 6806242 6806409 -133510356 + (TA)n Simple_repeat Simple_repeat 1 175 0 632 222 146 0 chr10 6807214 6807385 -133509380 + MER3 DNA MER1_type 14 209 0 382 318 117 25 chr10 6808809 6809048 -133507717 + MIR SINE MIR 1 261 -1 959 178 6 6 chr10 6809106 6809286 -133507479 - L1MA9 LINE L1 0 6312 6133 375 123 14 0 chr10 6809293 6809366 -133507399 + L1MDa LINE L1 1258 1331 -5209 309 214 17 79 chr10 6809350 6809469 -133507296 + L1MA1 LINE L1 4262 4375 -1771 * 379 252 52 0 chr10 6811431 6811546 -133505219 + L1MA1 LINE L1 5817 5937 -365 * 961 51 0 0 chr10 6811464 6811581 -133505184 + L1PB1 LINE L1 5856 5972 -179 7104 59 15 27 chr10 6811583 6812278 -133504487 + L1PA6 LINE L1 4774 5476 -678 2207 115 0 3 chr10 6812278 6812582 -133504183 + AluY SINE Alu 1 303 -8 7104 59 15 27 chr10 6812582 6812899 -133503866 + L1PA6 LINE L1 5476 5795 -359 2358 89 0 22 chr10 6812899 6813215 -133503550 + AluY SINE Alu 1 309 -2 7104 59 15 27 chr10 6813215 6813592 -133503173 + L1PA6 LINE L1 5795 6153 -1 303 239 44 44 chr10 6813899 6814012 -133502753 - MER103 DNA DNA -13 153 41 268 156 0 0 chr10 6814275 6814320 -133502445 + L1ME2 LINE L1 6015 6059 -105 392 274 0 9 chr10 6814357 6814463 -133502302 + L1ME2 LINE L1 6041 6145 -19 256 382 8 24 chr10 6814506 6814629 -133502136 - MIR SINE MIR -68 140 20 2361 87 3 3 chr10 6815664 6815973 -133500792 + AluSg SINE Alu 1 309 -1 1170 112 0 0 chr10 6816288 6816310 -133500455 + (TTCC)n Simple_repeat Simple_repeat 1 200 0 1170 112 0 0 chr10 6816310 6816488 -133500277 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 456 217 19 0 chr10 6816838 6816944 -133499821 - MLT2D LTR ERVL -274 140 33 198 71 0 0 chr10 6817236 6817264 -133499501 + (T)n Simple_repeat Simple_repeat 1 28 0 2833 80 16 11 chr10 6818321 6818694 -133498071 - THE1C LTR MaLR 0 375 1 400 318 155 0 chr10 6818808 6818956 -133497809 - MER5A DNA MER1_type -6 183 13 291 327 158 0 chr10 6819244 6819409 -133497356 - MIR3 SINE MIR -6 202 12 2145 273 73 28 chr10 6820103 6820879 -133495886 + MER63C DNA MER1_type 1 811 -119 326 300 53 53 chr10 6820979 6821206 -133495559 - HAL1b LINE L1 -1061 287 61 575 286 12 30 chr10 6821792 6821960 -133494805 + MLT1F1 LTR MaLR 3 167 -375 857 229 74 44 chr10 6822053 6822404 -133494361 + MLT1F1 LTR MaLR 146 565 -2 2166 154 25 57 chr10 6822627 6822648 -133494117 - MLT1B LTR MaLR 0 390 370 2610 176 24 0 chr10 6822648 6823064 -133493701 + MSTB LTR MaLR 1 426 0 2166 154 25 57 chr10 6823064 6823445 -133493320 - MLT1B LTR MaLR -20 370 1 303 309 111 18 chr10 6824234 6824391 -133492374 - MIR3 SINE MIR -34 174 4 261 306 10 31 chr10 6824663 6824761 -133492004 - MIR3 SINE MIR -9 199 104 246 128 0 0 chr10 6825224 6825263 -133491502 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1858 132 0 0 chr10 6825265 6825516 -133491249 - AluSx SINE Alu -61 251 1 1114 60 13 40 chr10 6826325 6826474 -133490291 - L1PA11 LINE L1 -3 6171 6027 225 0 0 0 chr10 6826482 6826507 -133490258 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1977 138 0 0 chr10 6826509 6826792 -133489973 - AluSq SINE Alu -30 283 1 216 289 70 51 chr10 6826815 6826971 -133489794 - MIR SINE MIR -45 217 59 384 40 0 0 chr10 6827980 6828030 -133488735 + (TG)n Simple_repeat Simple_repeat 2 51 0 771 231 129 0 chr10 6828817 6829003 -133487762 + MER58A DNA MER1_type 4 213 -11 1755 163 3 33 chr10 6829217 6829517 -133487248 - AluSx SINE Alu -17 295 5 3265 182 63 6 chr10 6829609 6830240 -133486525 - LTR65 LTR ERV1 0 669 3 896 119 0 22 chr10 6830705 6830839 -133485926 - L1PB4 LINE L1 0 6156 6026 3038 158 37 27 chr10 6830839 6831401 -133485364 - MER41B LTR ERV1 0 635 68 445 290 57 36 chr10 6831573 6831766 -133484999 - L2 LINE L2 -854 2460 2264 297 303 49 0 chr10 6831752 6831874 -133484891 - L2 LINE L2 -1198 2116 1989 * 4622 173 46 20 chr10 6831876 6833243 -133483522 + L1MB8 LINE L1 4768 6176 -2 2097 134 47 33 chr10 6833761 6834120 -133482645 + THE1B LTR MaLR 1 364 0 4548 108 14 47 chr10 6834550 6835293 -133481472 - L1PB1 LINE L1 -2 6149 5432 6683 223 68 103 chr10 6835295 6836788 -133479977 + Charlie6 DNA MER1_type 83 1628 -1872 511 270 0 0 chr10 6836788 6836903 -133479862 + FLAM_A SINE Alu 2 116 -17 2289 56 3 0 chr10 6836903 6837188 -133479577 - L1PA5 LINE L1 0 6154 5869 1381 138 0 0 chr10 6837193 6837396 -133479369 + AluSg/x SINE Alu 103 305 -5 6683 223 68 103 chr10 6837396 6838222 -133478543 + Charlie6 DNA MER1_type 1631 2521 -979 2681 188 70 4 chr10 6838284 6838799 -133477966 + MER21A LTR ERV1 383 931 0 2396 82 0 3 chr10 6838881 6839184 -133477581 + AluSx SINE Alu 1 302 -10 233 121 0 0 chr10 6839184 6839217 -133477548 - MER41C LTR ERV1 -521 33 1 310 161 118 21 chr10 6839217 6839310 -133477455 - L1PB4 LINE L1 -127 6029 5928 2581 122 0 3 chr10 6839724 6840076 -133476689 - THE1B LTR MaLR 0 364 14 383 143 16 0 chr10 6840064 6840127 -133476638 - THE1B LTR MaLR -300 64 1 * 617 211 44 3 chr10 6841512 6841681 -133475084 - MER69A DNA AcHobo 0 177 4 207 69 0 0 chr10 6841747 6841776 -133474989 + (TG)n Simple_repeat Simple_repeat 1 29 0 1589 192 25 6 chr10 6841830 6842147 -133474618 + MLT1A1 LTR MaLR 1 323 -42 2344 96 60 16 chr10 6842703 6842723 -133474042 + L1PB1 LINE L1 5761 5779 -385 189 0 0 0 chr10 6842723 6842744 -133474021 + (TA)n Simple_repeat Simple_repeat 1 21 0 2344 96 60 16 chr10 6842744 6843111 -133473654 + L1PB1 LINE L1 5779 6164 0 398 151 27 0 chr10 6843548 6843621 -133473144 - MER116 DNA Mariner 0 80 6 1875 118 63 76 chr10 6843641 6844021 -133472744 + THE1C LTR MaLR 1 375 0 1943 158 25 14 chr10 6844596 6844964 -133471801 - L1MB3 LINE L1 -2 6181 5810 2160 144 0 0 chr10 6845018 6845324 -133471441 + AluSx SINE Alu 1 306 -6 311 322 41 0 chr10 6845994 6846115 -133470650 - L2 LINE L2 -1 3271 3146 191 317 40 69 chr10 6846860 6847062 -133469703 - L2 LINE L2 -179 3093 2898 236 234 0 0 chr10 6847845 6847892 -133468873 + L1ME4a LINE L1 5986 6032 -89 1378 252 13 10 chr10 6849606 6850068 -133466697 - MER90 LTR ERV1 -6 569 57 2056 130 0 7 chr10 6850225 6850538 -133466227 + AluSx SINE Alu 1 311 0 2217 160 61 11 chr10 6850704 6851149 -133465616 - L1MA7 LINE L1 0 6291 5825 340 174 138 87 chr10 6851632 6851770 -133464995 - L1ME4a LINE L1 0 6121 5977 2073 121 4 0 chr10 6852504 6852803 -133463962 + AluSq SINE Alu 11 313 0 309 167 13 77 chr10 6853695 6853773 -133462992 + MER5A DNA MER1_type 69 141 -48 3965 164 39 1 chr10 6853799 6854495 -133462270 - L1PA16 LINE L1 -9 6157 5436 262 309 24 0 chr10 6855218 6855302 -133461463 - MIR SINE MIR -116 146 61 1060 113 0 7 chr10 6855731 6855882 -133460883 + FRAM SINE Alu 19 168 -8 181 194 104 0 chr10 6855986 6856053 -133460712 - MIR SINE MIR -133 129 56 439 219 75 78 chr10 6856222 6856613 -133460152 + MLT1H LTR MaLR 23 533 -16 2017 101 25 7 chr10 6858342 6858663 -133458102 + AluSq SINE Alu 1 326 0 341 344 81 18 chr10 6860873 6861094 -133455671 - MIR SINE MIR -2 260 26 1650 167 0 0 chr10 6861154 6861425 -133455340 - AluJo SINE Alu 0 306 36 1276 220 179 27 chr10 6861453 6861866 -133454899 - MER50 LTR ERV1 -19 715 240 284 264 195 0 chr10 6862600 6862687 -133454078 - MER50 LTR ERV1 -614 120 17 256 154 0 0 chr10 6863056 6863095 -133453670 + U2 snRNA snRNA 1 39 -149 418 284 16 0 chr10 6864080 6864207 -133452558 + MIR SINE MIR 47 175 -87 1197 104 12 0 chr10 6864611 6864775 -133451990 + AluSg/x SINE Alu 132 297 -13 2349 144 50 28 chr10 6864969 6865427 -133451338 - L1MB3 LINE L1 0 6183 5716 818 179 174 5 chr10 6865885 6866069 -133450696 - MER20 DNA MER1_type 0 219 5 3959 173 29 11 chr10 6866346 6866668 -133450097 + MER72 LTR ERV1 9 324 -398 2583 97 14 0 chr10 6866668 6867018 -133449747 + THE1A LTR MaLR 1 355 0 3959 173 29 11 chr10 6867018 6867396 -133449369 + MER72 LTR ERV1 324 721 -1 1891 250 65 55 chr10 6867413 6868101 -133448664 - MER21B LTR ERV1 -109 754 60 383 256 0 0 chr10 6868111 6868189 -133448576 - MER21B LTR ERV1 -765 98 21 273 77 0 0 chr10 6868289 6868328 -133448437 + AluSc SINE Alu 255 293 -6 256 241 84 36 chr10 6868321 6868404 -133448361 + Charlie6 DNA MER1_type 3035 3121 -379 * 2194 88 7 0 chr10 6868662 6868936 -133447829 - AluSg SINE Alu -11 299 24 189 281 41 77 chr10 6869405 6869601 -133447164 - L2 LINE L2 -2178 1136 948 1544 189 49 11 chr10 6870016 6870366 -133446399 + MER110A LTR ERV1 55 417 -51 474 277 113 39 chr10 6870445 6870676 -133446089 - MIR SINE MIR -8 254 7 287 260 0 0 chr10 6871643 6871716 -133445049 - MLT1L LTR MaLR -4 611 539 3201 142 41 42 chr10 6871973 6872585 -133444180 - LTR36 LTR ERV1 0 611 1 474 143 65 0 chr10 6872592 6872669 -133444096 + MER31B LTR ERV1 1 82 -384 342 319 43 7 chr10 6872744 6872882 -133443883 - MER87 LTR ERV1 0 541 399 1925 186 44 42 chr10 6873191 6873620 -133443145 + MER67A LTR ERV1 101 530 -13 898 212 103 75 chr10 6873723 6874059 -133442706 - LTR35 LTR ERV1 0 679 188 1320 233 94 8 chr10 6874716 6875098 -133441667 - MER90 LTR ERV1 -2 612 198 35 0 0 0 chr10 6875102 6875137 -133441628 + AT_rich Low_complexity Low_complexity 1 35 0 406 277 18 24 chr10 6875203 6875369 -133441396 - MER90 LTR ERV1 -407 168 4 408 274 49 60 chr10 6875490 6875775 -133440990 - L2 LINE L2 0 3313 3032 2207 125 0 0 chr10 6876262 6876549 -133440216 - AluSx SINE Alu -22 290 4 255 254 0 0 chr10 6877137 6877200 -133439565 - L3 LINE CR1 -124 1453 1391 279 191 0 0 chr10 6877200 6877268 -133439497 + (TG)n Simple_repeat Simple_repeat 1 68 0 2217 135 0 0 chr10 6877439 6877751 -133439014 - AluSx SINE Alu 0 312 1 459 0 0 0 chr10 6877873 6877924 -133438841 + (TA)n Simple_repeat Simple_repeat 2 52 0 211 287 82 25 chr10 6878176 6878298 -133438467 + MIR SINE MIR 134 262 0 3614 49 0 7 chr10 6878779 6879230 -133437535 - LTR7 LTR ERV1 -2 448 1 2564 76 45 13 chr10 6879230 6879610 -133437155 - HERVH LTR ERV1 0 7713 7322 1454 125 19 0 chr10 6879608 6879824 -133436941 - HERVH LTR ERV1 -1894 5819 5600 * 4409 143 1 1 chr10 6879825 6880487 -133436278 - HERVH LTR ERV1 -2564 5149 4488 3303 117 8 10 chr10 6880489 6880992 -133435773 - HERVH LTR ERV1 -3720 3993 3492 948 133 7 0 chr10 6880982 6881132 -133435633 - HERVH LTR ERV1 -4423 3290 3140 * 5360 90 0 18 chr10 6881111 6881880 -133434885 - HERVH LTR ERV1 -4718 2995 2241 262 280 206 0 chr10 6882502 6882609 -133434156 + MIR SINE MIR 70 198 -64 253 262 12 0 chr10 6883522 6883606 -133433159 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 2297 114 22 30 chr10 6883615 6883982 -133432783 - THE1B LTR MaLR 0 364 1 377 286 36 56 chr10 6885129 6885325 -133431440 + MIR3 SINE MIR 17 208 0 1864 153 7 4 chr10 6885870 6886151 -133430614 + AluJb SINE Alu 1 282 -30 194 0 39 0 chr10 6886154 6886180 -133430585 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 297 183 0 32 chr10 6886231 6886324 -133430441 + CT-rich Low_complexity Low_complexity 2 91 0 287 188 0 0 chr10 6886883 6886931 -133429834 - MLT2B1 LTR ERVL 0 520 473 428 250 0 7 chr10 6886931 6887071 -133429694 + (TG)n Simple_repeat Simple_repeat 1 139 0 1022 212 81 79 chr10 6887071 6887499 -133429266 - MLT2B1 LTR ERVL -41 410 1 24 32 0 0 chr10 6888491 6888522 -133428243 + AT_rich Low_complexity Low_complexity 1 31 0 2458 101 3 0 chr10 6889167 6889504 -133427261 - L1PB1 LINE L1 -4 6147 5810 3968 172 79 24 chr10 6890072 6890855 -133425910 - LTR1B LTR ERV1 0 826 1 237 277 107 27 chr10 6891032 6891144 -133425621 + MIR3 SINE MIR 67 187 -21 555 268 30 25 chr10 6892058 6892256 -133424509 - MIR SINE MIR -55 207 9 4446 158 94 0 chr10 6893485 6894240 -133422525 + LTR1B LTR ERV1 1 826 0 272 280 0 59 chr10 6894372 6894490 -133422275 + L2 LINE L2 3103 3213 -100 276 320 59 39 chr10 6894729 6894985 -133421780 + L1ME LINE L1 5556 5816 -305 363 233 15 79 chr10 6895205 6895356 -133421409 + MIR SINE MIR 51 192 -63 227 390 90 6 chr10 6896928 6897105 -133419660 + L2 LINE L2 3029 3220 -52 251 262 163 73 chr10 6897228 6897461 -133419304 + MLT1H LTR MaLR 97 350 -199 235 200 57 43 chr10 6897475 6897545 -133419220 + MLT1I LTR MaLR 316 386 -23 731 178 3 0 chr10 6897912 6898268 -133418497 + (TG)n Simple_repeat Simple_repeat 1 357 0 378 293 29 32 chr10 6899812 6900051 -133416714 + L1ME4a LINE L1 5668 5904 -217 1574 152 10 37 chr10 6900128 6900424 -133416341 - AluJo SINE Alu -22 290 3 34 24 0 0 chr10 6900602 6900643 -133416122 + AT_rich Low_complexity Low_complexity 1 41 0 2433 67 0 29 chr10 6900956 6901272 -133415493 + AluY SINE Alu 1 307 -4 21 36 0 0 chr10 6901412 6901440 -133415325 + AT_rich Low_complexity Low_complexity 1 28 0 2313 113 3 0 chr10 6902091 6902402 -133414363 + AluSx SINE Alu 1 312 0 1796 217 40 80 chr10 6902723 6903327 -133413438 + MLT1G LTR MaLR 11 590 0 1902 194 90 12 chr10 6904483 6904665 -133412100 + MLT1C LTR MaLR 2 168 -299 261 0 0 0 chr10 6904665 6904694 -133412071 + (CA)n Simple_repeat Simple_repeat 1 29 0 1902 194 90 12 chr10 6904694 6904943 -133411822 + MLT1C LTR MaLR 168 467 0 1527 97 60 0 chr10 6905294 6905511 -133411254 + MER30 DNA MER1_type 1 230 0 468 102 45 0 chr10 6905769 6905857 -133410908 + CT-rich Low_complexity Low_complexity 4 95 0 1248 66 0 16 chr10 6905857 6906040 -133410725 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2012 123 20 3 chr10 6906056 6906348 -133410417 - AluSx SINE Alu -15 297 1 252 59 0 0 chr10 6907496 6907530 -133409235 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 286 303 73 0 chr10 6907531 6907640 -133409125 - L2 LINE L2 -15 3298 3182 368 265 20 0 chr10 6908937 6909035 -133407730 + L2 LINE L2 3214 3313 0 2184 123 7 0 chr10 6909864 6910173 -133406592 - AluSx SINE Alu 0 312 2 2302 176 31 12 chr10 6910415 6910840 -133405925 - MSTB2 LTR MaLR 0 457 25 917 126 6 27 chr10 6911384 6911567 -133405198 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 425 133 19 29 chr10 6911576 6911681 -133405084 + GA-rich Low_complexity Low_complexity 2 105 0 252 184 0 0 chr10 6911825 6911874 -133404891 + GA-rich Low_complexity Low_complexity 4 52 0 2045 152 44 46 chr10 6912240 6912790 -133403975 + MLT2A2 LTR ERVL 1 554 0 234 0 0 0 chr10 6913776 6913802 -133402963 + (A)n Simple_repeat Simple_repeat 1 26 0 1458 40 10 25 chr10 6914072 6914274 -133402491 + HERVH LTR ERV1 7515 7713 0 3586 51 0 7 chr10 6914274 6914725 -133402040 + LTR7 LTR ERV1 1 448 -2 2635 184 59 0 chr10 6915239 6915765 -133401000 - MER74A LTR ERVL -1 557 1 303 96 0 0 chr10 6916251 6916303 -133400462 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 1235 75 0 0 chr10 6916304 6916464 -133400301 - L1PA14 LINE L1 -4 6157 5998 283 189 0 54 chr10 6916468 6916542 -133400223 + C-rich Low_complexity Low_complexity 6 75 0 344 180 0 72 chr10 6916548 6916742 -133400023 + CT-rich Low_complexity Low_complexity 1 180 0 4525 106 14 105 chr10 6916874 6917758 -133399007 - HERVH LTR ERV1 -6910 803 1 3544 60 0 7 chr10 6917760 6918211 -133398554 - LTR7 LTR ERV1 -2 448 1 232 299 154 0 chr10 6918231 6918348 -133398417 - L2 LINE L2 0 3313 3179 205 306 56 0 chr10 6918902 6918974 -133397791 - MIR3 SINE MIR -48 160 85 44711 44 2 2 chr10 6919401 6925559 -133391206 - L1PA3 LINE L1 0 6155 1 300 331 174 20 chr10 6925998 6926354 -133390411 + L2 LINE L2 2201 2611 -703 213 39 0 0 chr10 6927420 6927446 -133389319 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 1824 167 3 19 chr10 6927465 6927782 -133388983 - AluJb SINE Alu 0 312 1 21 71 0 0 chr10 6929449 6929491 -133387274 + AT_rich Low_complexity Low_complexity 1 42 0 336 302 47 9 chr10 6930111 6930259 -133386506 + MIR SINE MIR 8 161 -47 181 156 0 0 chr10 6931093 6931125 -133385640 - MER5A DNA MER1_type -114 75 44 726 96 0 0 chr10 6931798 6931902 -133384863 + (T)n Simple_repeat Simple_repeat 1 104 0 2267 118 3 3 chr10 6932343 6932729 -133384036 - AluSq SINE Alu 0 386 1 288 297 77 39 chr10 6932894 6933076 -133383689 + MIR SINE MIR 20 208 -54 2058 149 0 0 chr10 6933246 6933548 -133383217 - AluSx SINE Alu -10 302 1 315 269 59 0 chr10 6934714 6934833 -133381932 - MER76 LTR ERV 0 688 563 456 216 98 26 chr10 6935325 6935519 -133381246 - MER76 LTR ERV -102 586 379 303 213 13 27 chr10 6936581 6936656 -133380109 - MER45A DNA AcHobo 0 178 105 2118 135 3 0 chr10 6936661 6936965 -133379800 + AluSx SINE Alu 1 305 -7 998 204 129 8 chr10 6936984 6937224 -133379541 + AluJo SINE Alu 13 281 -31 424 216 137 0 chr10 6937234 6937336 -133379429 - MER45A DNA AcHobo -61 117 2 1070 157 5 14 chr10 6937974 6938190 -133378575 + L1MA4 LINE L1 6084 6297 -3 2185 98 32 0 chr10 6938625 6938910 -133377855 + AluSq SINE Alu 5 298 -15 507 155 83 0 chr10 6938920 6939004 -133377761 + AluJ/FLAM SINE Alu 1 91 -221 366 287 36 24 chr10 6939402 6939569 -133377196 + MER117 DNA MER1_type 22 190 -7 270 252 6 107 chr10 6939727 6939886 -133376879 + L1ME4a LINE L1 5577 5719 -402 989 201 22 45 chr10 6939939 6940163 -133376602 - MER20 DNA MER1_type 0 219 1 2245 265 47 24 chr10 6940650 6941436 -133375329 - L1MEc LINE L1 -5554 842 39 324 292 163 25 chr10 6941437 6941677 -133375088 + L1ME4a LINE L1 5698 5970 -151 287 273 18 0 chr10 6941681 6941791 -133374974 + (TA)n Simple_repeat Simple_repeat 2 113 0 1938 113 46 0 chr10 6942016 6942299 -133374466 - AluSx SINE Alu -16 296 1 1882 31 18 0 chr10 6942780 6943007 -133373758 - L1PA3 LINE L1 0 6155 5925 518 214 11 11 chr10 6943129 6943307 -133373458 + (CA)n Simple_repeat Simple_repeat 1 178 0 298 209 18 42 chr10 6943320 6943606 -133373159 + (CA)n Simple_repeat Simple_repeat 1 279 0 1169 215 80 43 chr10 6944362 6944799 -133371966 + L1ME2 LINE L1 5698 6150 -14 577 221 124 0 chr10 6945286 6945431 -133371334 - MIR SINE MIR -42 220 58 465 290 45 0 chr10 6945535 6945690 -133371075 - MIR3 SINE MIR -31 177 16 25 31 0 0 chr10 6945695 6945727 -133371038 + AT_rich Low_complexity Low_complexity 1 32 0 314 341 39 8 chr10 6945787 6945916 -133370849 - L3b LINE CR1 -6 1577 1445 875 266 63 47 chr10 6947548 6948209 -133368556 + L1M4 LINE L1 4037 4708 -1438 210 309 0 59 chr10 6948327 6948395 -133368370 + L2 LINE L2 3202 3265 -7 263 268 28 0 chr10 6949217 6949288 -133367477 - MLT1J LTR MaLR -335 176 104 241 122 92 37 chr10 6949638 6949725 -133367040 + L1ME4a LINE L1 5279 5372 -808 465 19 0 0 chr10 6950589 6950643 -133366122 + (CA)n Simple_repeat Simple_repeat 2 55 0 566 219 7 15 chr10 6950734 6950871 -133365894 - Charlie4 DNA MER1_type -2 1959 1824 227 79 26 0 chr10 6951097 6951135 -133365630 + (TC)n Simple_repeat Simple_repeat 1 39 0 457 256 50 33 chr10 6951256 6951498 -133365267 + L1ME4a LINE L1 5671 5916 -205 916 150 0 0 chr10 6952413 6952566 -133364199 + L1PA14 LINE L1 5819 5971 -190 1013 114 0 0 chr10 6952666 6952833 -133363932 - HERVH LTR ERV1 -1947 5766 5600 4019 143 9 1 chr10 6952834 6953491 -133363274 - HERVH LTR ERV1 -2564 5149 4488 2990 130 0 12 chr10 6953493 6953993 -133362772 - HERVH LTR ERV1 -3720 3993 3500 861 140 7 0 chr10 6953992 6954142 -133362623 - HERVH LTR ERV1 -4423 3290 3140 * 14192 84 11 17 chr10 6954121 6956289 -133360476 - HERVH LTR ERV1 -4718 2995 841 24 0 0 0 chr10 6956422 6956446 -133360319 + AT_rich Low_complexity Low_complexity 1 24 0 198 304 0 14 chr10 6956754 6956823 -133359942 + MIR SINE MIR 100 167 -95 7977 67 3 2 chr10 6956846 6957814 -133358951 - LTR5 LTR ERVK 0 969 1 434 63 11 168 chr10 6957814 6957909 -133358856 - SVA Other Other -450 936 857 12928 49 1 0 chr10 6957909 6959569 -133357196 - HERVK LTR ERVK -95 7148 5533 43625 43 4 3 chr10 6959814 6965341 -133351424 - HERVK LTR ERVK -1710 5533 1 7892 78 2 1 chr10 6965341 6966309 -133350456 - LTR5 LTR ERVK 0 969 1 340 125 113 12 chr10 6966693 6966773 -133349992 - MER112 DNA MER1_type -36 224 137 225 338 73 22 chr10 6967035 6967171 -133349594 + MIR SINE MIR 66 208 -54 180 0 0 0 chr10 6967206 6967226 -133349539 + (TG)n Simple_repeat Simple_repeat 1 20 0 258 195 47 47 chr10 6967444 6967613 -133349152 + (TA)n Simple_repeat Simple_repeat 2 170 0 * 564 279 0 0 chr10 6967608 6967787 -133348978 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 543 283 0 0 chr10 6967759 6967939 -133348826 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 279 268 0 0 chr10 6967957 6968136 -133348629 + (TA)n Simple_repeat Simple_repeat 1 179 0 466 174 48 0 chr10 6968203 6968370 -133348395 + (TA)n Simple_repeat Simple_repeat 1 175 0 257 209 44 0 chr10 6968386 6968544 -133348221 + (TA)n Simple_repeat Simple_repeat 1 165 0 415 189 28 33 chr10 6968564 6968744 -133348021 + (TA)n Simple_repeat Simple_repeat 1 179 0 471 193 17 28 chr10 6968769 6968950 -133347815 + (TA)n Simple_repeat Simple_repeat 2 180 0 249 222 22 22 chr10 6968965 6969055 -133347710 + L1MC4 LINE L1 6614 6703 -1339 664 231 17 6 chr10 6969066 6969424 -133347341 + (TA)n Simple_repeat Simple_repeat 1 362 0 374 188 44 0 chr10 6969494 6969654 -133347111 + (TA)n Simple_repeat Simple_repeat 2 168 0 564 214 0 0 chr10 6969669 6969847 -133346918 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 284 0 0 chr10 6969849 6969937 -133346828 + L1MC4 LINE L1 6616 6703 -1339 239 381 102 0 chr10 6970663 6970781 -133345984 - L2 LINE L2 -5 3267 3138 242 275 0 12 chr10 6971793 6971873 -133344892 - L1M4 LINE L1 -1537 4609 4531 256 281 216 45 chr10 6971910 6972109 -133344656 + L2 LINE L2 3080 3312 -1 213 366 11 21 chr10 6973463 6973556 -133343209 + MIR SINE MIR 30 121 -87 2231 118 170 5 chr10 6974723 6975140 -133341625 + LTR19A LTR ERV1 1 486 0 384 313 154 5 chr10 6975312 6975526 -133341239 - MIR SINE MIR -2 260 15 200 320 26 13 chr10 6976501 6976579 -133340186 - MIR3 SINE MIR -23 185 107 1542 101 38 0 chr10 6977340 6977549 -133339216 + AluSq SINE Alu 91 307 -6 3577 216 102 49 chr10 6977567 6978515 -133338250 + Charlie1a DNA MER1_type 56 1097 -1664 1049 23 78 0 chr10 6978515 6978644 -133338121 + MER85 DNA T2_type 1 139 0 3577 216 102 49 chr10 6978644 6979024 -133337741 + Charlie1a DNA MER1_type 1097 1455 0 677 272 27 13 chr10 6979052 6979276 -133337489 + L2 LINE L2 3085 3311 -2 225 303 137 63 chr10 6979712 6979887 -133336878 + L3 LINE CR1 879 1066 -511 338 330 140 28 chr10 6979912 6980233 -133336532 + L3 LINE CR1 1171 1527 -50 2159 96 11 0 chr10 6980373 6980654 -133336111 - AluSp SINE Alu -29 284 1 2071 158 3 0 chr10 6981021 6981331 -133335434 - AluJb SINE Alu -1 311 1 1943 240 58 24 chr10 6981611 6982352 -133334413 + L1M4 LINE L1 4310 5075 -1071 296 230 118 31 chr10 6982410 6982574 -133334191 + L1MDa LINE L1 1798 1992 -909 370 226 9 0 chr10 6982577 6982683 -133334082 + L1M4 LINE L1 5106 5212 -934 1174 186 79 28 chr10 6982684 6982937 -133333828 - AluJo SINE Alu -46 266 1 689 88 18 9 chr10 6982939 6983052 -133333713 + Tigger3(Golem) DNA MER2_type 2766 2879 -150 22 0 0 0 chr10 6983433 6983455 -133333310 + AT_rich Low_complexity Low_complexity 1 22 0 231 200 27 13 chr10 6983934 6984009 -133332756 - L1ME4a LINE L1 -2 6119 6044 1871 129 14 0 chr10 6984616 6984896 -133331869 + AluSx SINE Alu 1 284 -28 252 0 0 0 chr10 6984896 6984924 -133331841 + (TA)n Simple_repeat Simple_repeat 2 29 0 354 259 49 63 chr10 6985754 6985897 -133330868 - MIR SINE MIR -55 207 67 2135 118 7 0 chr10 6986051 6986347 -133330418 + AluSq SINE Alu 1 298 -15 330 204 120 0 chr10 6986444 6986552 -133330213 - L1ME4a LINE L1 -41 6080 5960 2153 165 14 6 chr10 6986670 6987033 -133329732 - L1MB1 LINE L1 -4 6164 5799 432 0 0 0 chr10 6987033 6987081 -133329684 + (CA)n Simple_repeat Simple_repeat 1 48 0 2352 166 8 26 chr10 6987085 6987737 -133329028 - L1MB1 LINE L1 -503 5665 5025 629 309 4 12 chr10 6987739 6987985 -133328780 - L1ME4a LINE L1 -295 5826 5583 261 259 17 0 chr10 6989013 6989071 -133327694 - MER91A DNA MER1_type -106 90 32 205 259 94 24 chr10 6989096 6989181 -133327584 + MIR SINE MIR 1 91 -171 209 311 30 52 chr10 6989234 6989369 -133327396 + L3 LINE CR1 1298 1429 -148 354 91 0 0 chr10 6989768 6989823 -133326942 + (TG)n Simple_repeat Simple_repeat 2 56 0 225 308 13 26 chr10 6990573 6990651 -133326114 + MIR3 SINE MIR 84 160 -48 189 0 0 0 chr10 6990718 6990739 -133326026 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1046 25 0 17 chr10 6990771 6990891 -133325874 - L1PA3 LINE L1 -1 6154 6037 23620 27 0 0 chr10 6990891 6994264 -133322501 + L1PA2 LINE L1 2643 6057 -98 3389 200 56 50 chr10 6994288 6995237 -133321528 - L1MC3 LINE L1 -7 7778 6824 818 197 167 78 chr10 6995485 6995940 -133320825 - MER66A LTR ERV1 -52 443 100 578 215 0 0 chr10 6996414 6996521 -133320244 - MER5A DNA MER1_type -82 107 1 287 363 108 20 chr10 6997008 6997212 -133319553 - L2 LINE L2 -1 3271 3050 2355 109 3 0 chr10 6997302 6997614 -133319151 - AluSq SINE Alu 0 313 1 184 146 21 21 chr10 6998796 6998844 -133317921 + CT-rich Low_complexity Low_complexity 3 50 0 1072 110 0 11 chr10 6999082 6999264 -133317501 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 303 175 0 0 chr10 6999268 6999325 -133317440 + CT-rich Low_complexity Low_complexity 2 58 0 298 332 133 13 chr10 7001512 7001822 -133314943 + L2 LINE L2 2798 3233 -39 2205 144 67 22 chr10 7001844 7002223 -133314542 + L1MB3 LINE L1 5739 6140 -43 2274 89 0 30 chr10 7002223 7002525 -133314240 + AluSx SINE Alu 1 293 -19 2205 144 67 22 chr10 7002525 7002562 -133314203 + L1MB3 LINE L1 6140 6174 -9 256 276 149 11 chr10 7003221 7003308 -133313457 - L2 LINE L2 -10 3262 3164 1891 115 0 14 chr10 7003706 7003985 -133312780 - AluSx SINE Alu 0 312 38 2482 138 53 19 chr10 7004370 7004783 -133311982 - MSTA LTR MaLR 0 428 2 354 237 30 46 chr10 7005038 7005169 -133311596 - MLT1K LTR MaLR -14 574 446 243 259 24 47 chr10 7005262 7005347 -133311418 - MLT1K LTR MaLR -341 247 165 187 290 43 29 chr10 7005799 7005868 -133310897 + L2 LINE L2 2970 3039 -274 364 289 79 9 chr10 7006169 7006283 -133310482 + L2 LINE L2 3192 3313 0 2076 101 17 10 chr10 7006305 7006602 -133310163 - AluSx SINE Alu -13 299 1 330 26 0 0 chr10 7007325 7007364 -133309401 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 297 27 27 chr10 7007449 7007560 -133309205 - MIR SINE MIR -92 170 60 1718 164 25 0 chr10 7008473 7008753 -133308012 + AluJo SINE Alu 1 287 -25 276 53 0 0 chr10 7008755 7008793 -133307972 + (TC)n Simple_repeat Simple_repeat 1 38 0 1384 284 34 27 chr10 7008806 7009398 -133307367 - MER74B LTR ERVL -14 608 13 267 284 136 52 chr10 7010686 7010841 -133305924 - MIR3 SINE MIR -21 187 20 2182 124 7 0 chr10 7011418 7011725 -133305040 + AluSg SINE Alu 1 309 -1 345 261 0 0 chr10 7012347 7012435 -133304330 - L2 LINE L2 -1 3312 3225 1758 159 24 7 chr10 7013206 7013496 -133303269 - AluJb SINE Alu -17 295 1 208 336 133 9 chr10 7013794 7013907 -133302858 + MIR SINE MIR 26 152 -110 2093 100 24 0 chr10 7014578 7014867 -133301898 + AluY SINE Alu 1 296 -15 2459 196 30 2 chr10 7015718 7015829 -133300936 + LOR1a LTR ERV1 1 107 -390 2287 123 0 0 chr10 7015829 7016137 -133300628 - AluSx SINE Alu -4 308 1 2459 196 30 2 chr10 7016137 7016500 -133300265 + LOR1a LTR ERV1 107 488 -9 237 232 29 43 chr10 7017070 7017139 -133299626 + MER5B DNA MER1_type 1 68 -110 675 236 133 5 chr10 7017144 7017339 -133299426 + L1M4 LINE L1 4716 4935 -1211 257 318 40 103 chr10 7017691 7017842 -133298923 + MIR SINE MIR 54 188 -74 2145 137 0 0 chr10 7017842 7018149 -133298616 - AluSx SINE Alu -5 307 1 257 318 40 103 chr10 7018149 7018220 -133298545 + MIR SINE MIR 188 262 0 214 365 14 73 chr10 7018436 7018608 -133298157 + MIR SINE MIR 31 189 -73 2450 145 0 0 chr10 7018608 7018945 -133297820 + MER1B DNA MER1_type 1 337 0 214 365 14 73 chr10 7018945 7018991 -133297774 + MIR SINE MIR 189 236 -26 1590 129 22 0 chr10 7019125 7019350 -133297415 - MER30 DNA MER1_type 0 230 1 197 300 67 11 chr10 7019350 7019434 -133297331 - MIR3 SINE MIR -12 196 108 39 84 0 0 chr10 7019894 7019989 -133296776 + AT_rich Low_complexity Low_complexity 1 95 0 203 295 168 32 chr10 7020132 7020227 -133296538 + MIR SINE MIR 37 144 -64 217 269 281 44 chr10 7021141 7021301 -133295464 - MIR3 SINE MIR -5 203 6 813 210 0 31 chr10 7021322 7021484 -133295281 + AluJo SINE Alu 126 282 -30 24 0 0 0 chr10 7021484 7021508 -133295257 + AT_rich Low_complexity Low_complexity 1 24 0 271 218 0 0 chr10 7021607 7021662 -133295103 - L1MC4 LINE L1 -1 8041 7987 1014 254 196 42 chr10 7021664 7022234 -133294531 - L1MC4 LINE L1 -144 7898 7241 1194 240 80 27 chr10 7022239 7022717 -133294048 - L1MC4 LINE L1 -810 7083 6500 295 178 14 14 chr10 7022725 7022798 -133293967 + CT-rich Low_complexity Low_complexity 3 75 0 357 240 7 32 chr10 7022798 7022908 -133293857 - L1MC4 LINE L1 -1454 6549 6431 827 204 4 116 chr10 7023714 7023963 -133292802 - MLT1B LTR MaLR -2 388 168 405 193 148 0 chr10 7023963 7024051 -133292714 + LOR1b LTR ERV1 1 101 -360 766 256 9 9 chr10 7024060 7024271 -133292494 + L1PBa LINE L1 6 216 -6647 * 2323 156 8 18 chr10 7024248 7024679 -133292086 + L1PBa LINE L1 1392 1902 -4960 180 0 0 0 chr10 7025418 7025438 -133291327 + (T)n Simple_repeat Simple_repeat 1 20 0 304 21 0 62 chr10 7025627 7025675 -133291090 - FLAM_A SINE Alu 0 133 89 886 165 0 0 chr10 7025691 7025824 -133290941 - FLAM_C SINE Alu 0 133 1 325 220 92 18 chr10 7026372 7026481 -133290284 - MER91A DNA MER1_type -25 171 55 200 196 0 18 chr10 7026948 7027004 -133289761 + GA-rich Low_complexity Low_complexity 2 56 0 463 287 0 0 chr10 7027022 7027130 -133289635 + MER34 LTR ERV1 1 108 -434 * 750 267 40 63 chr10 7027112 7027638 -133289127 + MER34 LTR ERV1 34 540 -2 515 272 44 81 chr10 7028235 7028269 -133288496 + MIR SINE MIR 1 35 -227 2175 129 3 3 chr10 7028269 7028580 -133288185 + AluSq SINE Alu 1 311 -2 515 272 44 81 chr10 7028580 7028735 -133288030 + MIR SINE MIR 35 180 -82 1911 151 7 7 chr10 7028735 7029033 -133287732 + AluJo SINE Alu 7 304 -8 515 272 44 81 chr10 7029033 7029114 -133287651 + MIR SINE MIR 180 262 0 2159 115 0 38 chr10 7029275 7029589 -133287176 + AluSx SINE Alu 1 302 -10 963 53 38 0 chr10 7029833 7029965 -133286800 - AluSc SINE Alu -172 137 1 681 146 18 9 chr10 7030781 7030891 -133285874 + MSTB LTR MaLR 2 112 -314 1839 73 146 137 chr10 7030895 7031453 -133285312 - LTR12 LTR ERV1 0 714 5 1639 195 26 3 chr10 7031453 7031755 -133285010 + MSTB LTR MaLR 118 426 0 2643 159 33 7 chr10 7031755 7032208 -133284557 - Tigger5 DNA MER2_type -24 2299 1835 1048 186 68 41 chr10 7032200 7032420 -133284345 - Tigger5 DNA MER2_type -2097 226 1 * 1452 190 93 22 chr10 7032426 7032747 -133284018 - MER2 DNA MER2_type 0 344 1 281 301 36 12 chr10 7032942 7033025 -133283740 + L2 LINE L2 2989 3073 -199 201 74 0 0 chr10 7033235 7033262 -133283503 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1600 161 169 21 chr10 7033327 7033699 -133283066 + MSTC LTR MaLR 2 428 0 282 29 0 0 chr10 7034187 7034222 -133282543 + (GA)n Simple_repeat Simple_repeat 2 36 0 584 234 51 13 chr10 7034592 7034750 -133282015 + MER5B DNA MER1_type 1 164 -14 411 259 20 26 chr10 7034819 7034967 -133281798 + MER21B LTR ERV1 17 197 -408 1400 296 54 51 chr10 7035025 7035617 -133281148 + MER21B LTR ERV1 159 752 -111 874 166 13 26 chr10 7035630 7035781 -133280984 - MER63 DNA MER1_type -282 780 6 949 192 0 0 chr10 7036702 7036853 -133279912 + FRAM SINE Alu 4 154 -12 201 74 0 0 chr10 7036911 7036938 -133279827 + (CA)n Simple_repeat Simple_repeat 2 28 0 901 228 67 0 chr10 7037122 7037315 -133279450 + MER3 DNA MER1_type 4 209 0 2254 180 5 18 chr10 7037376 7037770 -133278995 - MLT1B LTR MaLR -1 389 1 2167 130 0 0 chr10 7038210 7038510 -133278255 - AluSx SINE Alu -12 300 1 256 227 27 40 chr10 7038813 7038888 -133277877 + MIR SINE MIR 189 262 0 828 131 28 7 chr10 7039122 7039267 -133277498 + AluSc SINE Alu 154 301 -8 256 310 207 19 chr10 7039387 7039600 -133277165 + MIR SINE MIR 1 253 -9 967 229 128 81 chr10 7040230 7040737 -133276028 - MER34B LTR ERV1 0 565 35 836 189 78 0 chr10 7040755 7040908 -133275857 - MER58A DNA MER1_type -34 190 26 21 36 0 0 chr10 7040990 7041018 -133275747 + AT_rich Low_complexity Low_complexity 1 28 0 441 322 46 66 chr10 7041261 7041678 -133275087 + L2 LINE L2 2196 2681 -633 1908 173 0 3 chr10 7041678 7041991 -133274774 + AluJb SINE Alu 1 312 0 441 322 46 66 chr10 7041991 7042062 -133274703 + L2 LINE L2 2681 2752 -562 6197 17 6 0 chr10 7042062 7043208 -133273557 + L1PA3 LINE L1 4812 5961 -194 664 53 0 0 chr10 7043309 7043384 -133273381 - AluY SINE Alu -234 84 10 690 198 52 66 chr10 7043384 7043596 -133273169 - MER39 LTR ERV1 -106 601 393 646 164 68 41 chr10 7045214 7045265 -133271500 - MER39 LTR ERV1 0 707 659 2684 163 19 0 chr10 7045265 7045683 -133271082 + MSTB LTR MaLR 1 426 0 646 164 68 41 chr10 7045683 7045777 -133270988 - MER39 LTR ERV1 -48 659 558 463 321 77 47 chr10 7046014 7046756 -133270009 - L1M4 LINE L1 -1699 4447 3684 354 295 75 15 chr10 7046866 7047066 -133269699 - L1M4 LINE L1 -2806 3340 3129 534 161 200 89 chr10 7047243 7047392 -133269373 + MER3 DNA MER1_type 1 175 -34 2399 90 7 0 chr10 7047392 7047691 -133269074 + AluSc SINE Alu 1 301 -8 534 161 200 89 chr10 7047691 7047721 -133269044 + MER3 DNA MER1_type 175 200 -9 191 141 51 0 chr10 7047841 7047919 -133268846 + (TA)n Simple_repeat Simple_repeat 2 83 0 558 309 140 14 chr10 7049182 7049460 -133267305 + L3b LINE CR1 1171 1483 -100 2394 196 152 26 chr10 7049684 7050520 -133266245 - LTR28 LTR ERV1 0 1020 3 411 294 13 20 chr10 7051611 7051764 -133265001 + L1MC4a LINE L1 5791 5942 -1866 22 0 0 0 chr10 7051935 7051957 -133264808 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 7052021 7052044 -133264721 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2287 85 0 7 chr10 7052143 7052448 -133264317 - AluSc SINE Alu -6 303 1 2211 117 7 7 chr10 7053637 7053946 -133262819 - AluSx SINE Alu -3 309 1 222 309 47 81 chr10 7053998 7054110 -133262655 - L3 LINE CR1 -2 1575 1468 1637 202 125 46 chr10 7054110 7054590 -133262175 + MLT2B1 LTR ERVL 1 518 -2 222 309 47 81 chr10 7054590 7054626 -133262139 - L3 LINE CR1 -109 1468 1432 884 324 57 0 chr10 7054889 7055225 -133261540 + L2 LINE L2 2018 2372 -942 890 136 8 0 chr10 7055234 7055366 -133261399 + MER4A LTR ERV1 532 664 0 182 304 62 96 chr10 7055397 7055637 -133261128 + L2 LINE L2 2933 3164 -108 297 244 62 62 chr10 7056935 7057095 -133259670 - MIR SINE MIR -55 207 48 642 40 20 10 chr10 7057881 7057980 -133258785 + (TC)n Simple_repeat Simple_repeat 1 100 0 410 304 89 54 chr10 7058124 7058223 -133258542 - MIR SINE MIR 0 262 168 197 65 32 0 chr10 7058223 7058254 -133258511 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 410 304 89 54 chr10 7058254 7058378 -133258387 - MIR SINE MIR -94 168 31 339 348 108 54 chr10 7059137 7059508 -133257257 - L2 LINE L2 -8 3264 2874 337 130 0 26 chr10 7059512 7059589 -133257176 + (TG)n Simple_repeat Simple_repeat 2 76 0 3687 244 64 24 chr10 7059735 7059848 -133256917 + L1ME2 LINE L1 4145 4252 -1912 1889 116 4 0 chr10 7059848 7060116 -133256649 + AluSx SINE Alu 44 312 0 3687 244 64 24 chr10 7060116 7060359 -133256406 + L1ME2 LINE L1 4252 4484 -1680 2105 142 49 27 chr10 7060359 7060725 -133256040 - THE1C LTR MaLR -1 374 1 3687 244 64 24 chr10 7060725 7062317 -133254448 + L1ME2 LINE L1 4484 6164 0 843 300 80 34 chr10 7062740 7063354 -133253411 - HAL1b LINE L1 -475 873 232 2035 114 11 0 chr10 7063403 7063840 -133252925 + AluSx SINE Alu 1 440 0 289 336 55 23 chr10 7065269 7065397 -133251368 + L2 LINE L2 3134 3265 -7 2125 138 7 0 chr10 7065447 7065751 -133251014 + AluSx SINE Alu 1 306 -6 2256 116 3 0 chr10 7065760 7066061 -133250704 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 7066679 7066700 -133250065 + AT_rich Low_complexity Low_complexity 1 21 0 3504 117 71 11 chr10 7067003 7067526 -133249239 + MER41C LTR ERV1 1 554 0 220 283 17 0 chr10 7067673 7067733 -133249032 + CT-rich Low_complexity Low_complexity 2 62 0 192 343 45 0 chr10 7068417 7068484 -133248281 + MIR SINE MIR 41 110 -152 5377 191 17 27 chr10 7068762 7070407 -133246358 + L1PB3 LINE L1 4177 5793 -361 198 0 0 0 chr10 7070407 7070429 -133246336 + (TA)n Simple_repeat Simple_repeat 2 23 0 5377 191 17 27 chr10 7070429 7070788 -133245977 + L1PB3 LINE L1 5793 6154 0 3204 161 49 12 chr10 7070805 7071375 -133245390 + L1MB3 LINE L1 5586 6176 -7 1354 167 42 141 chr10 7071560 7071992 -133244773 - MLT1B LTR MaLR -1 389 1 2427 118 49 26 chr10 7072351 7072553 -133244212 + L1PB2 LINE L1 5748 5944 -207 2892 91 8 6 chr10 7072553 7072916 -133243849 - THE1B LTR MaLR 0 364 1 2427 118 49 26 chr10 7072916 7073104 -133243661 + L1PB2 LINE L1 5944 6147 -4 231 315 0 0 chr10 7073525 7073598 -133243167 + (CA)n Simple_repeat Simple_repeat 2 74 0 1296 150 4 26 chr10 7074990 7075223 -133241542 + AluJb SINE Alu 85 312 0 679 226 14 2 chr10 7076192 7076403 -133240362 + MLT1C LTR MaLR 223 467 0 219 363 60 27 chr10 7076429 7076762 -133240003 - L2 LINE L2 -840 2474 2131 836 251 69 20 chr10 7077601 7078092 -133238673 + MLT1E3 LTR MaLR 60 620 -4 219 186 0 0 chr10 7078239 7078282 -133238483 - L2 LINE L2 0 3313 3271 925 193 33 47 chr10 7079816 7080028 -133236737 + AluJo SINE Alu 1 209 -103 225 439 9 0 chr10 7080125 7080239 -133236526 + L2 LINE L2 3139 3253 -19 258 281 162 12 chr10 7081354 7081521 -133235244 - L1MC/D LINE L1 -1953 5855 5664 23 0 0 0 chr10 7081791 7081814 -133234951 + AT_rich Low_complexity Low_complexity 1 23 0 615 273 24 75 chr10 7082030 7082296 -133234469 + MIR SINE MIR 5 258 -4 271 314 0 0 chr10 7083436 7083506 -133233259 - L2 LINE L2 -18 3254 3185 805 113 9 9 chr10 7083513 7083628 -133233137 - THE1B LTR MaLR -8 356 242 419 276 134 42 chr10 7083656 7084117 -133232648 - L2 LINE L2 -221 3092 2594 2124 139 0 13 chr10 7085467 7085783 -133230982 + AluSx SINE Alu 1 312 0 400 325 64 43 chr10 7085976 7086256 -133230509 - L1ME LINE L1 -408 5754 5469 1502 186 25 94 chr10 7086311 7086436 -133230329 + MLT1A1 LTR MaLR 1 133 -232 2461 126 31 20 chr10 7086436 7086794 -133229971 + THE1B LTR MaLR 1 362 -2 1502 186 25 94 chr10 7086794 7087060 -133229705 + MLT1A1 LTR MaLR 133 365 0 245 294 0 9 chr10 7087232 7087341 -133229424 - L1ME LINE L1 -2408 5400 5293 1423 197 67 54 chr10 7087563 7087934 -133228831 - MLT1B LTR MaLR 0 390 15 295 325 101 37 chr10 7089648 7089836 -133226929 - MIR SINE MIR -14 248 49 4872 227 34 12 chr10 7089845 7091435 -133225330 + L1PB1 LINE L1 4150 5794 -357 1050 53 0 0 chr10 7091435 7091568 -133225197 + (TA)n Simple_repeat Simple_repeat 2 134 0 4872 227 34 12 chr10 7091568 7091934 -133224831 + L1PB1 LINE L1 5794 6151 0 889 207 58 11 chr10 7092090 7092278 -133224487 - MER58A DNA MER1_type -15 209 13 1497 262 33 9 chr10 7093774 7094272 -133222493 - MER90 LTR ERV1 -23 591 5 1554 186 60 23 chr10 7094276 7094626 -133222139 + MER45B DNA AcHobo 678 1040 0 525 315 41 10 chr10 7095984 7096181 -133220584 - MIR SINE MIR -55 207 5 427 323 52 39 chr10 7097189 7097344 -133219421 + MIR3 SINE MIR 38 194 -14 181 250 23 0 chr10 7097469 7097513 -133219252 + MIR SINE MIR 93 137 -71 * 207 320 124 0 chr10 7097509 7097606 -133219159 - L2 LINE L2 -43 3229 3121 * 292 261 0 0 chr10 7097585 7097650 -133219115 + MIR3 SINE MIR 143 207 -1 281 296 112 20 chr10 7098453 7098605 -133218160 + MIR SINE MIR 27 192 -70 2681 121 48 10 chr10 7098649 7099061 -133217704 + MSTA LTR MaLR 1 428 0 405 123 0 0 chr10 7100743 7100808 -133215957 + (TGAA)n Simple_repeat Simple_repeat 3 67 0 266 287 40 20 chr10 7100970 7101071 -133215694 - MIR3 SINE MIR -30 178 76 1028 255 91 31 chr10 7101264 7101684 -133215081 - HsTC2 DNA Tc2 -3 1895 1275 1660 267 26 20 chr10 7101707 7102205 -133214560 - HsTC2 DNA Tc2 -1394 504 4 977 210 0 0 chr10 7102338 7102500 -133214265 - FRAM SINE Alu -3 163 2 432 272 83 30 chr10 7102541 7102710 -133214055 + MER5B DNA MER1_type 1 178 0 1363 183 31 0 chr10 7103481 7103738 -133213027 - L1MA4 LINE L1 -14 6286 6022 427 164 33 90 chr10 7103740 7103788 -133212977 + L1MA4 LINE L1 5902 5951 -349 2357 97 7 0 chr10 7103788 7104086 -133212679 + AluSx SINE Alu 2 301 -11 427 164 33 90 chr10 7104086 7104159 -133212606 + L1MA4 LINE L1 5951 6016 -284 1546 86 99 5 chr10 7104392 7104614 -133212151 - MER75B DNA T2_type 0 243 1 534 272 52 26 chr10 7105070 7105261 -133211504 + MIR SINE MIR 67 262 0 1653 128 83 4 chr10 7105860 7106125 -133210640 + AluJb SINE Alu 3 288 -24 321 118 0 0 chr10 7106200 7106251 -133210514 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4336 88 14 0 chr10 7106262 7106818 -133209947 - L1PA10 LINE L1 -4 6164 5601 280 188 0 0 chr10 7106965 7107013 -133209752 - MER75 DNA T2_type -4 510 463 821 215 48 72 chr10 7108370 7108417 -133208348 + Tigger7 DNA MER2_type 64 111 -2376 2441 79 0 0 chr10 7108417 7108721 -133208044 - AluY SINE Alu -7 304 1 821 215 48 72 chr10 7108721 7108882 -133207883 + Tigger7 DNA MER2_type 111 267 -2220 487 209 0 0 chr10 7108879 7108970 -133207795 + Tigger7 DNA MER2_type 2488 2578 -9 * 228 67 0 0 chr10 7110543 7110573 -133206192 + (T)n Simple_repeat Simple_repeat 1 30 0 1441 126 5 5 chr10 7110606 7110812 -133205953 + AluJb SINE Alu 85 290 -22 975 85 0 48 chr10 7110816 7111005 -133205760 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1752 150 0 0 chr10 7111270 7111543 -133205222 + AluJo SINE Alu 30 302 -10 1659 182 14 27 chr10 7111933 7112230 -133204535 + AluJb SINE Alu 1 293 -19 420 349 25 28 chr10 7112845 7113129 -133203636 - L1ME3A LINE L1 -221 5949 5667 364 261 35 43 chr10 7113154 7113269 -133203496 - MER5B DNA MER1_type -5 173 60 197 293 168 24 chr10 7113358 7113525 -133203240 - L2 LINE L2 -208 3064 2874 1615 205 25 47 chr10 7113528 7113614 -133203151 - Zaphod DNA AcHobo -4 4027 3941 1563 197 10 7 chr10 7113614 7113904 -133202861 + AluJo SINE Alu 1 291 -21 1615 205 25 47 chr10 7113904 7114260 -133202505 - Zaphod DNA AcHobo -90 3941 3595 864 206 71 90 chr10 7114258 7114333 -133202432 - Zaphod DNA AcHobo -3041 990 915 * 5513 32 34 2 chr10 7114333 7114959 -133201806 + SVA Other Other 741 1386 0 864 206 71 90 chr10 7114959 7115241 -133201524 - Zaphod DNA AcHobo -3116 915 642 2472 187 36 46 chr10 7115241 7115637 -133201128 - MER74A LTR ERVL -2 556 166 2092 125 3 34 chr10 7115637 7115957 -133200808 + AluSg SINE Alu 1 310 0 2472 187 36 46 chr10 7115957 7116122 -133200643 - MER74A LTR ERVL -392 166 1 864 206 71 90 chr10 7116122 7116229 -133200536 - Zaphod DNA AcHobo -3389 642 534 2010 292 82 38 chr10 7116247 7117301 -133199464 + Charlie8 DNA MER1_type 166 1265 -1152 1379 247 117 93 chr10 7117365 7118391 -133198374 + Charlie8 DNA MER1_type 1367 2417 0 282 254 85 25 chr10 7118474 7118592 -133198173 - L2 LINE L2 -2 3311 3187 309 292 124 0 chr10 7119890 7120003 -133196762 + HAL1 LINE L1 4 130 -2377 243 0 0 0 chr10 7120241 7120268 -133196497 + (T)n Simple_repeat Simple_repeat 1 27 0 1787 180 42 9 chr10 7120268 7120601 -133196164 - L1MC1 LINE L1 -13 6320 5977 1979 66 4 0 chr10 7122824 7123065 -133193700 + L1PA5 LINE L1 5913 6154 0 560 267 134 31 chr10 7123619 7124028 -133192737 + MLT1H1 LTR MaLR 1 473 -117 226 324 14 0 chr10 7124078 7124149 -133192616 + L3 LINE CR1 1307 1378 -199 1685 190 10 3 chr10 7124190 7124500 -133192265 + AluJo SINE Alu 1 312 0 251 338 105 0 chr10 7124518 7124651 -133192114 + MIR SINE MIR 56 202 -60 625 250 215 12 chr10 7125037 7125377 -133191388 + LTR16A LTR ERVL 21 429 -21 469 159 45 0 chr10 7125809 7125897 -133190868 + MER112 DNA MER1_type 138 229 -31 358 309 176 0 chr10 7126022 7126187 -133190578 + MER112 DNA MER1_type 26 219 -41 4236 87 16 12 chr10 7126902 7127754 -133189011 + L1PA8 LINE L1 4767 5614 -517 1843 82 115 4 chr10 7127754 7128014 -133188751 + L1PA8 LINE L1 5874 6172 0 378 254 49 35 chr10 7130853 7130995 -133185770 - L2 LINE L2 -19 3294 3151 217 324 27 27 chr10 7131085 7131233 -133185532 - L2 LINE L2 -126 3187 3040 7955 105 12 24 chr10 7131242 7132392 -133184373 + HSMAR1 DNA Mariner 1 1136 -151 1503 118 9 0 chr10 7132493 7132713 -133184052 + HSMAR1 DNA Mariner 1061 1282 -5 2077 281 63 23 chr10 7132716 7133270 -133183495 - L2 LINE L2 -286 3027 2332 1775 181 66 15 chr10 7133270 7133305 -133183460 - MLT2D LTR ERVL -2 412 380 333 0 0 0 chr10 7133305 7133342 -133183423 + (TG)n Simple_repeat Simple_repeat 2 38 0 1775 181 66 15 chr10 7133342 7133698 -133183067 - MLT2D LTR ERVL -34 380 1 2077 281 63 23 chr10 7133698 7133999 -133182766 - L2 LINE L2 -981 2332 2044 916 225 90 5 chr10 7134645 7134845 -133181920 - MER58A DNA MER1_type -6 218 2 29 0 0 0 chr10 7135831 7135860 -133180905 + AT_rich Low_complexity Low_complexity 1 29 0 426 249 109 15 chr10 7136288 7136450 -133180315 - MIR SINE MIR -51 211 32 403 307 107 19 chr10 7137065 7137270 -133179495 - MIR SINE MIR -5 257 35 282 73 0 0 chr10 7138125 7138166 -133178599 + (CA)n Simple_repeat Simple_repeat 1 41 0 741 244 25 6 chr10 7138222 7138382 -133178383 + MER63A DNA MER1_type 48 210 0 361 299 0 30 chr10 7138979 7139111 -133177654 + MIR SINE MIR 32 158 -82 658 328 20 4 chr10 7139122 7139366 -133177399 - MIR SINE MIR -13 249 2 269 350 43 17 chr10 7139925 7140042 -133176723 + MIR SINE MIR 25 144 -64 2995 262 37 39 chr10 7141279 7142459 -133174306 + L1MA9 LINE L1 42 1223 -5883 2486 160 3 0 chr10 7142459 7142822 -133173943 - THE1B LTR MaLR 0 364 1 2995 262 37 39 chr10 7142822 7143563 -133173202 + L1MA9 LINE L1 1223 1964 -5142 228 67 0 0 chr10 7143563 7143593 -133173172 + (TA)n Simple_repeat Simple_repeat 1 30 0 2995 262 37 39 chr10 7143593 7143609 -133173156 + L1MA9 LINE L1 1964 1979 -5127 2170 112 0 0 chr10 7143609 7143894 -133172871 - AluSg SINE Alu -25 285 1 2995 262 37 39 chr10 7143894 7144583 -133172182 + L1MA9 LINE L1 1979 2668 -4438 2261 114 16 0 chr10 7144583 7144891 -133171874 + AluSp SINE Alu 1 313 0 2995 262 37 39 chr10 7144891 7145766 -133170999 + L1MA9 LINE L1 2668 4135 -2971 4853 164 53 46 chr10 7145853 7146648 -133170117 + L1MA9 LINE L1 5280 6068 -1204 2411 193 39 0 chr10 7146648 7147058 -133169707 + MSTB LTR MaLR 1 426 0 4853 164 53 46 chr10 7147058 7147252 -133169513 + L1MA9 LINE L1 6068 6259 -1013 1657 109 91 69 chr10 7147252 7147562 -133169203 + AluSg SINE Alu 1 316 0 4853 164 53 46 chr10 7147562 7148344 -133168421 + L1MA9 LINE L1 6259 7063 -209 2763 136 11 33 chr10 7148346 7148669 -133168096 + L1PB3 LINE L1 5708 6020 -134 2149 119 10 3 chr10 7148669 7148979 -133167786 + AluSx SINE Alu 1 312 0 2763 136 11 33 chr10 7148979 7149110 -133167655 + L1PB3 LINE L1 6020 6152 -2 1203 154 23 14 chr10 7149129 7149343 -133167422 + L1MA9 LINE L1 7057 7272 0 763 311 10 0 chr10 7149623 7149829 -133166936 - MIR SINE MIR -32 230 23 357 281 189 0 chr10 7150964 7151128 -133165637 + MER112 DNA MER1_type 60 254 -6 2062 151 138 26 chr10 7151261 7151646 -133165119 - MSTA LTR MaLR 0 428 1 2381 126 27 33 chr10 7152375 7152741 -133164024 + THE1B LTR MaLR 1 364 0 2305 114 37 45 chr10 7153226 7153604 -133163161 - THE1C LTR MaLR 0 375 1 356 262 69 54 chr10 7154021 7154206 -133162559 + MIR SINE MIR 15 204 -4 1879 144 33 13 chr10 7154439 7154744 -133162021 + AluSx SINE Alu 1 311 -1 4456 183 11 0 chr10 7154828 7155617 -133161148 + L1MB3 LINE L1 5379 6176 -7 197 292 226 15 chr10 7156318 7156513 -133160252 - MIR SINE MIR -6 256 21 372 265 22 55 chr10 7156597 7156778 -133159987 - Charlie7 DNA MER1_type 0 2612 2438 227 286 9 29 chr10 7156754 7156859 -133159906 - Charlie7 DNA MER1_type -2502 110 8 * 2071 132 63 11 chr10 7157810 7158158 -133158607 - THE1C LTR MaLR 0 375 10 2088 254 48 36 chr10 7158843 7159675 -133157090 + L1ME3A LINE L1 5127 5973 -197 502 265 29 0 chr10 7159690 7159826 -133156939 + L1ME3A LINE L1 5913 6052 -118 441 259 52 35 chr10 7159850 7160024 -133156741 + L1ME3A LINE L1 5989 6165 -5 4772 27 2 0 chr10 7160144 7160670 -133156095 + L1PA5 LINE L1 5625 6151 -3 1765 178 27 40 chr10 7161981 7162351 -133154414 + MLT1A1 LTR MaLR 1 365 0 398 306 97 8 chr10 7162423 7162557 -133154208 - L2 LINE L2 0 3272 3127 814 319 25 0 chr10 7162647 7162885 -133153880 - MIR SINE MIR -6 256 13 204 352 0 0 chr10 7162904 7162992 -133153773 - L2 LINE L2 -193 3079 2992 466 302 83 0 chr10 7163807 7163976 -133152789 + MIR SINE MIR 28 210 -52 1129 253 68 7 chr10 7164295 7164591 -133152174 - MLT1C LTR MaLR 0 467 154 2399 173 24 18 chr10 7164600 7165057 -133151708 + MER66B LTR ERV1 27 486 0 693 134 104 0 chr10 7165057 7165191 -133151574 - MLT1C LTR MaLR -314 153 6 420 256 0 0 chr10 7166074 7166246 -133150519 + (TG)n Simple_repeat Simple_repeat 1 172 0 204 143 0 0 chr10 7166290 7166332 -133150433 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr10 7166545 7166566 -133150199 + AT_rich Low_complexity Low_complexity 1 21 0 579 328 40 12 chr10 7166566 7166819 -133149946 + MIR SINE MIR 3 262 0 353 271 0 10 chr10 7167176 7167272 -133149493 + L2 LINE L2 3197 3291 -22 392 285 26 20 chr10 7167312 7167463 -133149302 - MIR SINE MIR -23 239 88 238 225 42 0 chr10 7167610 7167681 -133149084 + GA-rich Low_complexity Low_complexity 1 74 0 2287 133 38 12 chr10 7170391 7170737 -133146028 - THE1A LTR MaLR 0 355 1 2897 175 68 26 chr10 7171319 7171603 -133145162 - MER7C DNA MER2_type -2426 602 331 1876 117 9 74 chr10 7171603 7171745 -133145020 + AluJb SINE Alu 3 153 -159 2289 101 0 3 chr10 7171745 7172041 -133144724 + AluY SINE Alu 1 295 -16 1876 117 9 74 chr10 7172041 7172224 -133144541 + AluJb SINE Alu 153 307 -5 2897 175 68 26 chr10 7172224 7172517 -133144248 - MER7C DNA MER2_type -2697 331 1 2315 125 47 36 chr10 7172764 7173124 -133143641 + THE1B LTR MaLR 1 364 0 425 207 11 11 chr10 7173954 7174041 -133142724 + MER5B DNA MER1_type 5 91 -87 1098 268 96 28 chr10 7174142 7174384 -133142381 + MLT1C LTR MaLR 1 225 -242 2294 202 24 77 chr10 7174384 7174969 -133141796 - MLT2B3 LTR ERVL 0 554 1 1098 268 96 28 chr10 7174969 7175163 -133141602 + MLT1C LTR MaLR 225 467 0 226 250 215 0 chr10 7175720 7175864 -133140901 + MER112 DNA MER1_type 60 234 -26 383 211 53 44 chr10 7175886 7176000 -133140765 + L1MC5 LINE L1 7609 7723 -238 340 225 75 75 chr10 7176491 7176678 -133140087 + L1MC5 LINE L1 7717 7903 -58 180 337 112 53 chr10 7176937 7177106 -133139659 + L2 LINE L2 3088 3266 -6 2055 103 0 4 chr10 7177183 7177446 -133139319 + AluSp SINE Alu 34 295 -18 611 296 47 39 chr10 7177535 7177768 -133138997 - MIR SINE MIR -10 252 18 182 286 100 0 chr10 7177913 7177983 -133138782 - MIR SINE MIR -7 255 179 3590 174 0 17 chr10 7178623 7178684 -133138081 + L1MB3 LINE L1 5553 5614 -569 1568 220 48 20 chr10 7178684 7179039 -133137726 + MLT1A1 LTR MaLR 1 365 0 3590 174 0 17 chr10 7179039 7179584 -133137181 + L1MB3 LINE L1 5614 6150 -33 1910 100 30 50 chr10 7179584 7179885 -133136880 + AluSq SINE Alu 1 295 -18 3590 174 0 17 chr10 7179885 7179916 -133136849 + L1MB3 LINE L1 6150 6180 -3 205 200 0 0 chr10 7179920 7179960 -133136805 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1938 129 0 11 chr10 7180358 7180638 -133136127 - AluSx SINE Alu -6 306 30 505 155 0 0 chr10 7180639 7180710 -133136055 + AluS SINE Alu 16 86 -226 300 70 0 0 chr10 7180723 7180766 -133135999 + (TTA)n Simple_repeat Simple_repeat 3 45 0 38765 30 26 1 chr10 7180766 7186187 -133130578 - L1PA2 LINE L1 -18 6137 578 828 41 0 0 chr10 7186154 7186252 -133130513 - L1PA2 LINE L1 -6048 98 1 * 221 277 78 64 chr10 7186323 7186464 -133130301 - MIR SINE MIR -72 190 48 1834 155 0 24 chr10 7187406 7187706 -133129059 + AluSx SINE Alu 11 293 -19 1956 71 0 4 chr10 7187711 7187958 -133128807 + AluY SINE Alu 46 289 -22 382 22 0 0 chr10 7187958 7188004 -133128761 + (TAAAA)n Simple_repeat Simple_repeat 5 180 0 894 110 26 39 chr10 7188250 7188367 -133128398 - Charlie3 DNA MER1_type 0 2702 2586 2177 121 0 7 chr10 7188367 7188664 -133128101 - AluSq SINE Alu -16 297 3 894 110 26 39 chr10 7188664 7188701 -133128064 - Charlie3 DNA MER1_type -116 2586 2550 319 43 0 0 chr10 7188712 7188759 -133128006 + Charlie3 DNA MER1_type 2529 2575 -135 * 2295 117 32 36 chr10 7188725 7189136 -133127629 - MER1A DNA MER1_type -120 409 1 1679 46 0 46 chr10 7189153 7189370 -133127395 + AluY SINE Alu 105 311 0 1931 172 0 16 chr10 7190151 7190465 -133126300 - AluJb SINE Alu -3 309 1 1247 134 0 0 chr10 7190818 7190997 -133125768 - AluYa5 SINE Alu 0 311 133 2877 179 39 7 chr10 7191001 7191391 -133125374 - L1MB2 LINE L1 0 6171 5756 2513 77 0 3 chr10 7191391 7191701 -133125064 - AluY SINE Alu -2 309 1 2877 179 39 7 chr10 7191701 7191880 -133124885 - L1MB2 LINE L1 -415 5756 5584 1496 266 113 43 chr10 7192156 7193074 -133123691 - L2 LINE L2 0 3313 2333 202 128 26 0 chr10 7193726 7193765 -133123000 + A-rich Low_complexity Low_complexity 2 41 0 587 327 98 42 chr10 7194504 7194691 -133122074 + L1MEc LINE L1 57 232 -6164 312 91 0 0 chr10 7194691 7194735 -133122030 + (CA)n Simple_repeat Simple_repeat 1 44 0 587 327 98 42 chr10 7194735 7195386 -133121379 + L1MEc LINE L1 232 942 -5454 * 2018 236 87 23 chr10 7195357 7196333 -133120432 + L1ME2 LINE L1 5183 6226 -7 352 22 0 0 chr10 7196980 7197026 -133119739 + MADE1 DNA Mariner 1 46 -34 321 300 44 19 chr10 7197505 7197665 -133119100 + HAL1 LINE L1 390 553 -1954 309 311 68 87 chr10 7197829 7197990 -133118775 + HAL1 LINE L1 1762 1919 -588 618 294 60 33 chr10 7198107 7198526 -133118239 + HAL1 LINE L1 1993 2422 -85 757 258 151 25 chr10 7198539 7198970 -133117795 + LTR16C LTR ERVL 6 490 -1 233 310 59 91 chr10 7200602 7200789 -133115976 + L3 LINE CR1 405 585 -992 348 285 77 68 chr10 7200829 7201036 -133115729 + MIR SINE MIR 43 251 -11 2530 60 0 13 chr10 7201290 7201605 -133115160 - AluY SINE Alu 0 311 1 1741 199 21 8 chr10 7201610 7201991 -133114774 - L1MB2 LINE L1 -2 6169 5784 1280 150 23 35 chr10 7201999 7202259 -133114506 + L1 LINE L1 3640 3896 -2250 1705 175 99 19 chr10 7202814 7203237 -133113528 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 7203386 7203442 -133113323 + AT_rich Low_complexity Low_complexity 1 56 0 1193 150 84 14 chr10 7203982 7204195 -133112570 + MER30 DNA MER1_type 1 228 -2 1947 129 13 30 chr10 7204431 7204734 -133112031 + AluSq SINE Alu 5 302 -11 2266 82 0 24 chr10 7205103 7205396 -133111369 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 7206520 7206664 -133110101 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 7206732 7206989 -133109776 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 7207502 7207775 -133108990 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 7208544 7208604 -133108161 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 7209039 7209108 -133107657 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 7209186 7209351 -133107414 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 7209386 7209423 -133107342 + (TG)n Simple_repeat Simple_repeat 1 37 0 1905 111 7 32 chr10 7209549 7209828 -133106937 - AluSq SINE Alu -41 272 1 821 129 7 21 chr10 7209832 7209972 -133106793 + MER50 LTR ERV1 574 711 -23 609 218 60 32 chr10 7210071 7210354 -133106411 - LTR29 LTR ERV1 -89 529 221 2260 123 0 13 chr10 7210513 7210829 -133105936 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 7210858 7210955 -133105810 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 7210955 7211244 -133105521 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 7211244 7211381 -133105384 - L1M4 LINE L1 -880 5266 5151 1328 255 88 76 chr10 7211381 7211683 -133105082 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 7211683 7212006 -133104759 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 7212006 7212349 -133104416 + MLT1E1 LTR MaLR 298 654 0 312 238 27 96 chr10 7212349 7212374 -133104391 - L1M4 LINE L1 -995 5151 5126 2431 112 0 0 chr10 7212418 7212731 -133104034 + AluSq SINE Alu 1 313 0 231 241 241 9 chr10 7213238 7213354 -133103411 + MIR3 SINE MIR 66 208 0 538 194 123 32 chr10 7213809 7213964 -133102801 - MER21B LTR ERV1 -57 806 638 230 250 10 0 chr10 7214082 7214095 -133102670 + (TA)n Simple_repeat Simple_repeat 2 13 -85 1332 81 0 6 chr10 7214095 7214269 -133102496 + L1PA8 LINE L1 5991 6163 -9 230 250 10 0 chr10 7214269 7214351 -133102414 + (TA)n Simple_repeat Simple_repeat 13 98 0 804 148 42 5 chr10 7214493 7215305 -133101460 - L1MC1 LINE L1 0 6333 5188 1905 154 0 37 chr10 7215310 7215634 -133101131 - AluJb SINE Alu 0 312 1 1527 203 135 0 chr10 7215696 7216045 -133100720 - MSTD LTR MaLR 0 396 1 2406 167 55 7 chr10 7216835 7217271 -133099494 - LTR32 LTR ERVL 0 471 15 1681 94 106 196 chr10 7217329 7217799 -133098966 - MSTA LTR MaLR 0 428 1 413 213 66 115 chr10 7217848 7218031 -133098734 + MER5A DNA MER1_type 2 175 -14 810 200 7 0 chr10 7218032 7218177 -133098588 + MER5A DNA MER1_type 14 159 -30 216 0 0 0 chr10 7218568 7218592 -133098173 + (GA)n Simple_repeat Simple_repeat 2 25 0 529 333 94 19 chr10 7219064 7219427 -133097338 + L3 LINE CR1 487 876 -701 198 294 249 34 chr10 7219441 7219531 -133097234 + L3 LINE CR1 1020 1089 -488 2076 100 0 31 chr10 7219531 7219821 -133096944 + AluSx SINE Alu 18 298 -14 198 294 249 34 chr10 7219821 7219907 -133096858 + L3 LINE CR1 1089 1234 -343 438 274 137 0 chr10 7220522 7220719 -133096046 - L1MC/D LINE L1 -1997 5811 5588 2361 94 10 0 chr10 7220721 7221028 -133095737 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 7221945 7222222 -133094543 + AluSx SINE Alu 1 292 -20 2443 107 0 0 chr10 7222225 7222535 -133094230 + AluSx SINE Alu 1 310 -2 1099 134 128 0 chr10 7222554 7222741 -133094024 + AluJo SINE Alu 84 294 -18 699 207 124 6 chr10 7222814 7222983 -133093782 + MER5A DNA MER1_type 1 189 0 193 338 119 0 chr10 7224223 7224383 -133092382 + MIR SINE MIR 31 209 -53 209 303 91 30 chr10 7224792 7224891 -133091874 - MIR3 SINE MIR -43 165 61 271 243 61 52 chr10 7225180 7225325 -133091440 - MIR SINE MIR -54 208 62 476 171 0 11 chr10 7226173 7226261 -133090504 + MIR3 SINE MIR 101 187 -21 612 255 133 49 chr10 7226551 7227035 -133089730 - L2 LINE L2 -31 3282 2759 273 284 154 38 chr10 7227221 7227380 -133089385 + MIR SINE MIR 35 206 -56 1936 163 0 22 chr10 7227965 7228284 -133088481 + AluJb SINE Alu 1 312 0 205 167 19 56 chr10 7229020 7229074 -133087691 + MER91B DNA MER1_type 4 55 -135 310 273 187 7 chr10 7230367 7230506 -133086259 - MER5A DNA MER1_type 0 189 26 372 94 0 0 chr10 7230718 7230771 -133085994 + (TG)n Simple_repeat Simple_repeat 1 53 0 194 161 0 0 chr10 7231781 7231812 -133084953 + MIR SINE MIR 67 97 -165 1004 224 5 14 chr10 7231934 7232144 -133084621 - MIR SINE MIR -34 228 21 271 306 90 9 chr10 7232317 7232428 -133084337 + MIR SINE MIR 28 147 -115 243 230 35 92 chr10 7233601 7233688 -133083077 + MIR SINE MIR 79 160 -102 355 259 123 65 chr10 7234155 7234325 -133082440 - MIR3 SINE MIR -19 189 10 207 245 20 0 chr10 7235100 7235149 -133081616 - MIR3 SINE MIR -8 200 151 516 286 239 19 chr10 7235210 7236232 -133080533 - L2 LINE L2 0 3313 2008 446 310 65 0 chr10 7236346 7236501 -133080264 - MIR SINE MIR -97 165 1 1662 180 80 50 chr10 7237207 7237584 -133079181 - MLT1B LTR MaLR -2 388 1 7379 33 0 0 chr10 7238979 7240020 -133076745 - L1P2 LINE L1 -638 5517 4476 190 259 0 52 chr10 7240065 7240123 -133076642 - L2 LINE L2 -18 3254 3200 274 243 243 37 chr10 7240145 7240281 -133076484 + MIR3 SINE MIR 12 175 -33 1230 67 11 6 chr10 7240724 7240903 -133075862 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1695 185 0 51 chr10 7240906 7241220 -133075545 - AluJb SINE Alu -14 298 1 4732 120 12 15 chr10 7241490 7241841 -133074924 + HSMAR2 DNA Mariner 2 352 -950 1750 121 0 0 chr10 7241841 7242072 -133074693 + AluSg/x SINE Alu 76 306 -4 4732 120 12 15 chr10 7242072 7242932 -133073833 + HSMAR2 DNA Mariner 352 1300 -2 378 362 46 9 chr10 7243799 7244017 -133072748 + MIR SINE MIR 22 247 -15 2319 86 7 10 chr10 7244639 7244940 -133071825 - AluSq SINE Alu -13 300 1 188 270 230 14 chr10 7245039 7245113 -133071652 - MIR SINE MIR -113 149 60 2344 120 0 0 chr10 7245618 7245917 -133070848 - AluSx SINE Alu -13 299 1 940 117 0 0 chr10 7246481 7246601 -133070164 - AluSq/x SINE Alu -193 120 1 341 283 80 43 chr10 7246652 7246790 -133069975 - L1M4 LINE L1 -1260 4886 4744 192 207 259 0 chr10 7246937 7246995 -133069770 - MIR SINE MIR -90 172 100 2319 119 0 0 chr10 7247576 7247888 -133068877 + AluSx SINE Alu 1 312 0 287 307 0 62 chr10 7248501 7248693 -133068072 + CT-rich Low_complexity Low_complexity 1 180 0 355 183 39 13 chr10 7248861 7249014 -133067751 + CT-rich Low_complexity Low_complexity 2 158 0 233 211 56 11 chr10 7249420 7249510 -133067255 - L1ME3 LINE L1 -91 6071 5978 1565 197 0 36 chr10 7251102 7251411 -133065354 + AluJb SINE Alu 1 298 -14 979 69 15 0 chr10 7252564 7252695 -133064070 + L1MA3 LINE L1 6173 6305 0 2001 131 10 17 chr10 7252851 7253149 -133063616 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 7253151 7253191 -133063574 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 7253191 7253512 -133063253 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 7253653 7253794 -133062971 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 7253794 7254107 -133062658 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 7254107 7254431 -133062334 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 7254918 7254949 -133061816 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 7254950 7255245 -133061520 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 7256089 7256296 -133060469 + MIR SINE MIR 20 249 -13 2458 87 0 0 chr10 7256583 7256881 -133059884 - AluSx SINE Alu -14 298 1 263 103 0 0 chr10 7257449 7257488 -133059277 + L1MA9 LINE L1 6274 6312 0 26 50 0 0 chr10 7257552 7257592 -133059173 + AT_rich Low_complexity Low_complexity 1 40 0 330 282 122 20 chr10 7257925 7258170 -133058595 - L2 LINE L2 -358 2956 2687 * 621 294 50 5 chr10 7258167 7258388 -133058377 + L2 LINE L2 1879 2109 -1205 191 318 11 34 chr10 7259181 7259269 -133057496 + MIR SINE MIR 103 188 -74 192 77 0 0 chr10 7260262 7260288 -133056477 + (GAA)n Simple_repeat Simple_repeat 2 27 0 907 185 38 12 chr10 7260518 7260752 -133056013 - L1MA6 LINE L1 -6 6294 6034 1066 151 5 21 chr10 7261327 7261519 -133055246 - MER5A DNA MER1_type 0 189 1 1088 164 31 62 chr10 7261708 7261934 -133054831 + MER20 DNA MER1_type 1 219 0 207 0 0 0 chr10 7262822 7262845 -133053920 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 999 209 70 42 chr10 7263017 7263372 -133053393 - L1MC5 LINE L1 -265 7696 7332 2259 78 0 11 chr10 7263394 7263713 -133053052 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 7263713 7264030 -133052735 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 7264853 7265048 -133051717 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 7265048 7265083 -133051682 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 7265083 7265204 -133051561 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 7265288 7265425 -133051340 - MIR3 SINE MIR -52 156 9 196 278 93 86 chr10 7265959 7266025 -133050740 - L3 LINE CR1 -352 1225 1161 2096 154 0 0 chr10 7266025 7266324 -133050441 + AluJb SINE Alu 1 299 -13 196 278 93 86 chr10 7266324 7266408 -133050357 - L3 LINE CR1 -416 1161 1074 579 228 15 95 chr10 7266514 7266777 -133049988 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 7267025 7267119 -133049646 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 7267344 7267644 -133049121 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 7267685 7267927 -133048838 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 7268096 7268128 -133048637 + MER63 DNA MER1_type 701 732 -328 864 108 7 50 chr10 7268132 7268271 -133048494 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 7268298 7268357 -133048408 + MER63 DNA MER1_type 968 1026 -35 347 302 128 54 chr10 7268497 7268941 -133047824 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 7269108 7269222 -133047543 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 7269332 7269488 -133047277 + MIR SINE MIR 65 262 0 1807 145 13 30 chr10 7269710 7270014 -133046751 + AluSq SINE Alu 1 299 -14 37268 73 7 6 chr10 7270344 7275945 -133040820 + L1P2 LINE L1 175 5779 -375 1167 49 7 14 chr10 7275945 7276087 -133040678 + AluY SINE Alu 5 145 -166 691 197 48 21 chr10 7276235 7276423 -133040342 + LTR41 LTR ERVL 1 193 -580 378 237 128 83 chr10 7276681 7276935 -133039830 + LTR41 LTR ERVL 510 795 0 425 347 12 12 chr10 7277232 7277399 -133039366 - MIR SINE MIR -93 169 3 * 442 302 116 39 chr10 7277399 7277626 -133039139 - MIR SINE MIR -16 246 2 224 26 0 79 chr10 7277833 7277871 -133038894 + (CCCTAA)n Simple_repeat Simple_repeat 6 40 0 659 96 19 0 chr10 7278988 7279092 -133037673 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 238 250 0 0 chr10 7280078 7280130 -133036635 - MER81 DNA DNA 0 114 63 2192 136 72 37 chr10 7280130 7280558 -133036207 - MSTB2 LTR MaLR 0 457 15 407 147 0 0 chr10 7280559 7280627 -133036138 - MER81 DNA DNA -45 69 2 376 259 17 52 chr10 7330745 7330861 -132985904 + L2 LINE L2 3199 3310 -3 264 368 22 22 chr10 7332687 7332869 -132983896 - L1ME LINE L1 -520 5601 5420 407 285 166 51 chr10 7333213 7333743 -132983022 - L1ME4a LINE L1 -5 6116 5526 279 276 25 107 chr10 7334976 7335028 -132981737 - MIR3 SINE MIR -8 200 145 2055 129 3 13 chr10 7335028 7335339 -132981426 - AluSg SINE Alu 0 310 3 279 276 25 107 chr10 7335339 7335482 -132981283 - MIR3 SINE MIR -63 145 21 23 0 0 0 chr10 7335951 7335974 -132980791 + AT_rich Low_complexity Low_complexity 1 23 0 2178 121 7 0 chr10 7335975 7336280 -132980485 + AluSg SINE Alu 1 307 -3 740 153 7 0 chr10 7336466 7336603 -132980162 + GA-rich Low_complexity Low_complexity 2 139 0 26 0 0 0 chr10 7336885 7336911 -132979854 + AT_rich Low_complexity Low_complexity 1 26 0 733 199 283 22 chr10 7338275 7338551 -132978214 - MER7A DNA MER2_type 0 346 1 607 271 21 0 chr10 7339019 7339163 -132977602 - L1ME LINE L1 -5573 497 351 27 0 0 0 chr10 7340527 7340554 -132976211 + AT_rich Low_complexity Low_complexity 1 27 0 1999 256 40 75 chr10 7340554 7341336 -132975429 + L1ME1 LINE L1 10 763 -5307 752 233 33 11 chr10 7341350 7341530 -132975235 + MER5A DNA MER1_type 1 184 -5 691 219 120 9 chr10 7341534 7341786 -132974979 + L1ME1 LINE L1 772 1045 -5035 1451 231 33 3 chr10 7341825 7342128 -132974637 + L1ME1 LINE L1 5260 5571 -529 1121 146 0 0 chr10 7342145 7342316 -132974449 + MLT1B LTR MaLR 1 171 -219 1932 123 49 7 chr10 7342320 7342604 -132974161 + AluSg SINE Alu 1 296 -14 1136 200 5 0 chr10 7342734 7342939 -132973826 + MLT1B LTR MaLR 185 390 0 935 234 65 27 chr10 7342941 7343202 -132973563 + L1ME1 LINE L1 5599 5869 -231 532 231 41 81 chr10 7343284 7343505 -132973260 + L1ME1 LINE L1 5869 6080 -20 232 233 29 29 chr10 7343525 7343628 -132973137 + A-rich Low_complexity Low_complexity 2 104 0 443 100 0 0 chr10 7343688 7343748 -132973017 - Alu SINE Alu -8 302 243 85 47 0 0 chr10 7343856 7343983 -132972782 + AT_rich Low_complexity Low_complexity 1 127 0 23 78 0 0 chr10 7344063 7344114 -132972651 + AT_rich Low_complexity Low_complexity 1 51 0 207 127 48 0 chr10 7344382 7344445 -132972320 + (TA)n Simple_repeat Simple_repeat 1 66 0 1221 180 0 14 chr10 7345097 7345308 -132971457 + AluJo SINE Alu 5 212 -100 688 201 107 44 chr10 7345313 7345472 -132971293 + AluJo SINE Alu 109 277 -35 180 0 0 0 chr10 7345480 7345500 -132971265 + (T)n Simple_repeat Simple_repeat 1 20 0 803 183 20 20 chr10 7345873 7346026 -132970739 + FRAM SINE Alu 10 162 -14 337 311 24 36 chr10 7346044 7346211 -132970554 + MIR SINE MIR 53 217 -45 407 302 16 16 chr10 7347586 7347712 -132969053 + MIR SINE MIR 112 237 -25 2494 83 0 3 chr10 7347841 7348154 -132968611 - AluSp SINE Alu -1 312 1 537 295 93 51 chr10 7349925 7349951 -132966814 + MIR SINE MIR 2 25 -237 2192 76 29 0 chr10 7349951 7350261 -132966504 - AluSg SINE Alu 0 318 1 537 295 93 51 chr10 7350261 7350469 -132966296 + MIR SINE MIR 25 248 -14 243 317 30 20 chr10 7350848 7350949 -132965816 - MIR SINE MIR -64 198 97 2049 95 0 130 chr10 7350989 7351336 -132965429 + AluSx SINE Alu 1 302 0 441 307 50 20 chr10 7351411 7351613 -132965152 - MLT1I LTR MaLR -2 407 200 436 337 137 49 chr10 7351707 7352131 -132964634 - L2 LINE L2 -89 3183 2733 210 336 67 8 chr10 7353667 7353786 -132962979 - MIR SINE MIR -123 139 14 * 255 303 17 59 chr10 7353716 7353835 -132962930 + MIR SINE MIR 39 152 -110 206 290 29 0 chr10 7355133 7355202 -132961563 + MIR3 SINE MIR 105 175 -33 187 383 32 11 chr10 7355342 7355436 -132961329 - MIR3 SINE MIR -105 103 8 236 143 24 95 chr10 7355447 7355531 -132961234 - Charlie7 DNA MER1_type -36 2576 2499 2493 239 103 22 chr10 7355603 7356544 -132960221 - Charlie7 DNA MER1_type -94 2518 1479 287 261 185 60 chr10 7356562 7356746 -132960019 - Charlie7 DNA MER1_type -2272 340 134 791 172 16 0 chr10 7356762 7356890 -132959875 + AluJo SINE Alu 5 134 -178 13395 127 92 5 chr10 7356894 7356940 -132959825 - L1PBa LINE L1 -3175 3687 3646 1972 141 13 16 chr10 7356940 7357252 -132959513 - AluSx SINE Alu -1 311 1 13395 127 92 5 chr10 7357252 7360014 -132956751 - L1PBa LINE L1 -3216 3646 634 960 191 21 0 chr10 7360014 7360208 -132956557 - L1PBa LINE L1 -6663 200 3 1952 70 0 0 chr10 7360221 7360464 -132956301 - L1P4 LINE L1 -469 5692 5450 366 301 103 14 chr10 7362177 7362323 -132954442 - MIR3 SINE MIR -10 198 40 196 279 51 25 chr10 7362908 7362987 -132953778 - L3b LINE CR1 -249 1334 1254 1888 183 16 35 chr10 7363076 7363448 -132953317 + MLT1A1 LTR MaLR 1 365 0 244 365 77 48 chr10 7363454 7363764 -132953001 - L2 LINE L2 -15 3257 2939 3009 80 0 0 chr10 7364236 7364609 -132952156 - L1PA13 LINE L1 -2 6161 5789 318 40 0 100 chr10 7364616 7364666 -132952099 - L1PA13 LINE L1 -344 5817 5773 468 105 0 0 chr10 7365147 7365223 -132951542 + (TC)n Simple_repeat Simple_repeat 1 76 0 645 10 0 134 chr10 7366645 7366742 -132950023 + L1PA2 LINE L1 15 98 -6048 * 38273 32 24 1 chr10 7366740 7372148 -132944617 + L1PA2 LINE L1 623 6155 0 2015 144 0 0 chr10 7372923 7373222 -132943543 - AluSx SINE Alu -13 299 1 199 331 41 50 chr10 7374023 7374144 -132942621 + L2 LINE L2 3153 3272 0 2252 121 0 0 chr10 7375715 7376021 -132940744 - AluSx SINE Alu -6 306 1 625 264 19 0 chr10 7376053 7376212 -132940553 + MIR SINE MIR 50 211 -51 183 265 0 20 chr10 7376712 7376761 -132940004 + L2 LINE L2 2988 3035 -237 309 206 41 0 chr10 7377796 7377869 -132938896 + MER103 DNA DNA 2 77 -89 2690 40 0 0 chr10 7378259 7378560 -132938205 + AluY SINE Alu 1 301 -10 2032 121 28 0 chr10 7378606 7378895 -132937870 + AluSx SINE Alu 1 297 -15 242 71 0 24 chr10 7379253 7379295 -132937470 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1587 206 0 3 chr10 7379319 7379606 -132937159 - AluJo SINE Alu -26 286 1 424 217 43 2 chr10 7379658 7379834 -132936931 + LTR16A1 LTR ERVL 246 457 0 2156 99 34 0 chr10 7380171 7380463 -132936302 - AluSg SINE Alu -8 302 1 597 332 53 4 chr10 7381370 7381596 -132935169 + L2 LINE L2 2812 3048 -265 239 217 0 22 chr10 7381992 7382038 -132934727 + MER106B DNA MER1_type 1 45 -1014 634 195 27 34 chr10 7382056 7382205 -132934560 + MER106B DNA MER1_type 908 1055 -4 2189 101 10 0 chr10 7382785 7383082 -132933683 - AluSp SINE Alu -13 300 1 197 139 23 0 chr10 7383526 7383569 -132933196 + (TG)n Simple_repeat Simple_repeat 1 44 0 558 261 141 0 chr10 7384523 7384707 -132932058 - MIR SINE MIR 0 262 53 1520 202 70 89 chr10 7384745 7385275 -132931490 - MLT2B1 LTR ERVL 0 520 1 1103 84 17 11 chr10 7385332 7385511 -132931254 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 180 152 0 0 chr10 7385511 7385544 -132931221 + CT-rich Low_complexity Low_complexity 2 34 0 1966 132 0 0 chr10 7385545 7385818 -132930947 - AluSx SINE Alu -39 273 1 849 138 8 8 chr10 7386661 7386791 -132929974 + FLAM_C SINE Alu 1 130 -3 216 0 0 0 chr10 7386794 7386818 -132929947 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1388 179 39 0 chr10 7386835 7387069 -132929696 + AluJb SINE Alu 1 243 -69 265 163 62 0 chr10 7387207 7387287 -132929478 + (TTATA)n Simple_repeat Simple_repeat 2 86 0 2173 53 0 8 chr10 7388205 7388467 -132928298 - L1PA5 LINE L1 -3 6151 5892 2236 85 7 4 chr10 7389350 7389680 -132927085 - AluSq SINE Alu 0 331 1 969 233 33 14 chr10 7390308 7390523 -132926242 + MER20 DNA MER1_type 1 219 0 293 235 188 0 chr10 7390924 7391009 -132925756 - MLT1J2 LTR MaLR -161 289 189 1047 217 7 8 chr10 7391201 7391446 -132925319 - MLT2B1 LTR ERVL -173 241 3 284 256 44 11 chr10 7391446 7391536 -132925229 - L1M LINE L1 -752 5410 5318 1246 224 16 32 chr10 7392058 7392371 -132924394 - AluJo SINE Alu -4 308 1 1108 288 69 37 chr10 7392517 7393363 -132923402 - L1M4 LINE L1 -901 5245 4373 229 317 0 20 chr10 7393642 7393743 -132923022 + T-rich Low_complexity Low_complexity 2 100 0 1600 184 54 32 chr10 7393887 7394203 -132922562 - MER58B DNA MER1_type 0 341 19 2467 121 8 8 chr10 7395974 7396338 -132920427 - THE1B LTR MaLR 0 364 1 246 136 0 0 chr10 7396908 7396952 -132919813 + (TC)n Simple_repeat Simple_repeat 2 45 0 198 352 28 9 chr10 7399682 7399790 -132916975 - L2 LINE L2 0 3272 3163 5950 65 11 0 chr10 7400127 7401328 -132915437 - L1PA8A LINE L1 -2 6129 5021 305 155 0 17 chr10 7401328 7401375 -132915390 - L1P LINE L1 -3432 2714 2667 1017 121 0 7 chr10 7401375 7401515 -132915250 - AluSq/x SINE Alu -173 139 1 705 230 0 0 chr10 7401638 7401816 -132914949 + (CA)n Simple_repeat Simple_repeat 1 178 0 207 114 0 0 chr10 7402869 7402904 -132913861 + (TCC)n Simple_repeat Simple_repeat 1 35 0 387 312 34 29 chr10 7402943 7403148 -132913617 - MIR SINE MIR -14 248 43 1419 194 44 106 chr10 7403350 7403784 -132912981 - MLT2D LTR ERVL -7 407 1 407 217 0 0 chr10 7405891 7405974 -132910791 + L2 LINE L2 1935 2017 -1297 375 78 0 0 chr10 7406701 7406752 -132910013 + (GA)n Simple_repeat Simple_repeat 1 51 0 417 286 97 7 chr10 7406872 7407026 -132909739 + L2 LINE L2 2363 2530 -784 1478 113 0 0 chr10 7407045 7407239 -132909526 + AluSx SINE Alu 1 194 -118 939 88 64 0 chr10 7407239 7407364 -132909401 + AluSg/x SINE Alu 143 275 -35 1784 108 115 0 chr10 7407445 7407705 -132909060 - AluSx SINE Alu -18 294 5 237 326 74 0 chr10 7408283 7408378 -132908387 + HAL1 LINE L1 19 120 -2387 1795 149 30 33 chr10 7409589 7409890 -132906875 - AluJo SINE Alu -12 300 1 1534 115 165 27 chr10 7411434 7411695 -132905070 - AluSg SINE Alu -3 297 1 2677 33 7 0 chr10 7413065 7413366 -132903399 + AluY SINE Alu 1 303 -8 1637 177 55 6 chr10 7413652 7413979 -132902786 + MER2 DNA MER2_type 1 343 -1 185 0 40 0 chr10 7414442 7414467 -132902298 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 524 200 8 0 chr10 7416917 7417042 -132899723 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 195 283 151 13 chr10 7417237 7417389 -132899376 - MIR SINE MIR -3 259 87 1340 172 17 4 chr10 7418361 7418599 -132898166 + AluJb SINE Alu 64 304 -8 1798 178 0 16 chr10 7419181 7419485 -132897280 - AluJb SINE Alu -13 299 1 1532 196 91 6 chr10 7420161 7420502 -132896263 - MLT1A2 LTR MaLR -4 370 1 1528 104 75 90 chr10 7421331 7421610 -132895155 - AluSq SINE Alu 0 313 39 2125 130 3 0 chr10 7423618 7423910 -132892855 + AluSc SINE Alu 1 293 -16 274 284 0 14 chr10 7424909 7424983 -132891782 + CT-rich Low_complexity Low_complexity 2 74 0 943 199 0 0 chr10 7425574 7425735 -132891030 - AluJo SINE Alu -5 297 137 2338 114 56 8 chr10 7425738 7426096 -132890669 - THE1C LTR MaLR 0 375 1 794 161 8 0 chr10 7426109 7426239 -132890526 - AluJo SINE Alu -171 131 1 2702 48 0 0 chr10 7426345 7426661 -132890104 - L1PA5 LINE L1 -343 5811 5496 2274 73 23 7 chr10 7426664 7426966 -132889799 + L1PA5 LINE L1 5842 6148 -6 316 258 22 0 chr10 7427248 7427337 -132889428 - HAL1 LINE L1 -861 1646 1556 2198 101 0 10 chr10 7427352 7427640 -132889125 + AluSx SINE Alu 5 289 -23 424 188 51 68 chr10 7427716 7427833 -132888932 - HAL1 LINE L1 -1813 694 580 443 308 115 40 chr10 7427877 7428250 -132888515 - HAL1 LINE L1 -2099 408 8 2297 114 57 20 chr10 7428438 7428789 -132887976 + THE1B LTR MaLR 1 364 0 248 286 133 0 chr10 7428993 7429091 -132887674 + L2 LINE L2 3200 3310 -3 2103 117 7 26 chr10 7429132 7429441 -132887324 - AluSx SINE Alu -9 303 1 965 255 109 26 chr10 7430025 7430448 -132886317 - MLT1C LTR MaLR -4 463 6 21 0 0 0 chr10 7430595 7430616 -132886149 + AT_rich Low_complexity Low_complexity 1 21 0 447 19 0 0 chr10 7430684 7430736 -132886029 + (CA)n Simple_repeat Simple_repeat 2 53 0 2427 88 0 0 chr10 7431633 7431928 -132884837 + AluSx SINE Alu 1 295 -17 718 120 0 7 chr10 7432782 7433000 -132883765 + AluSx SINE Alu 37 304 -8 405 278 99 68 chr10 7433005 7433059 -132883706 + L2 LINE L2 2437 2488 -825 1899 203 104 38 chr10 7433059 7433586 -132883179 - MER68 LTR ERV1 0 562 1 405 278 99 68 chr10 7433586 7434054 -132882711 + L2 LINE L2 2488 3045 -268 2459 94 0 0 chr10 7434054 7434361 -132882404 + AluSx SINE Alu 1 307 -5 405 278 99 68 chr10 7434361 7434632 -132882133 + L2 LINE L2 3045 3306 -7 2020 125 3 0 chr10 7434943 7435230 -132881535 + AluSx SINE Alu 1 288 -24 494 90 0 13 chr10 7435230 7435308 -132881457 + (GGGA)n Simple_repeat Simple_repeat 1 77 0 198 103 0 0 chr10 7435487 7435516 -132881249 + (T)n Simple_repeat Simple_repeat 1 29 0 2115 105 3 7 chr10 7436902 7437215 -132879550 + AluSx SINE Alu 1 312 0 642 288 106 30 chr10 7439779 7440186 -132876579 + MLT1L LTR MaLR 146 583 -32 724 192 61 37 chr10 7440812 7441026 -132875739 + MER20 DNA MER1_type 1 219 0 1832 164 14 3 chr10 7442211 7442503 -132874262 + AluJb SINE Alu 1 295 -17 1665 123 4 0 chr10 7443300 7443319 -132873446 - AluSx SINE Alu -8 304 287 258 32 0 0 chr10 7443319 7443350 -132873415 + (TCCCC)n Simple_repeat Simple_repeat 5 35 0 1665 123 4 0 chr10 7443350 7443574 -132873191 - AluSx SINE Alu -25 287 60 370 280 32 24 chr10 7444201 7444326 -132872439 + MIR SINE MIR 5 130 -132 924 181 136 0 chr10 7444435 7444634 -132872131 - MER46A DNA MER2_type 0 236 11 2312 78 0 27 chr10 7445609 7445904 -132870861 - AluSc SINE Alu -22 287 1 2599 235 81 33 chr10 7446924 7447691 -132869074 - MER21B LTR ERV1 -51 812 9 2079 130 0 0 chr10 7448965 7449250 -132867515 - AluSg SINE Alu -25 285 1 747 150 41 0 chr10 7449282 7449429 -132867336 - L1MA4 LINE L1 -3 6297 6145 4164 142 66 1 chr10 7449629 7450328 -132866437 + L1PA16 LINE L1 5423 6166 0 944 141 0 0 chr10 7452430 7452565 -132864200 + AluJo SINE Alu 1 135 -177 2290 125 0 0 chr10 7453027 7453339 -132863426 + AluSx SINE Alu 1 312 0 2401 98 0 0 chr10 7453698 7454003 -132862762 - AluSg SINE Alu -5 305 1 21 57 0 0 chr10 7454436 7454471 -132862294 + AT_rich Low_complexity Low_complexity 1 35 0 323 297 27 9 chr10 7454759 7454870 -132861895 + MIR3 SINE MIR 14 126 -82 327 231 45 52 chr10 7455160 7455294 -132861471 - L2 LINE L2 -87 3226 3094 254 244 0 61 chr10 7457981 7458063 -132858702 - MIR SINE MIR -130 132 56 29 0 0 0 chr10 7458815 7458844 -132857921 + AT_rich Low_complexity Low_complexity 1 29 0 2465 108 8 22 chr10 7459143 7459512 -132857253 - THE1B LTR MaLR 0 364 1 1124 273 93 44 chr10 7459672 7460196 -132856569 + L1MC4a LINE L1 5393 5942 -1866 261 311 11 11 chr10 7460418 7460508 -132856257 - MIR3 SINE MIR -21 187 98 203 147 0 0 chr10 7460896 7460930 -132855835 + (TGG)n Simple_repeat Simple_repeat 2 35 0 463 266 211 0 chr10 7462109 7462398 -132854367 + L2 LINE L2 2456 2805 -509 2042 96 0 0 chr10 7462518 7462778 -132853987 + AluY SINE Alu 43 302 -9 307 250 26 0 chr10 7462821 7462897 -132853868 - L2 LINE L2 -2 3311 3234 1225 192 40 14 chr10 7466243 7466519 -132850246 - L1MB3 LINE L1 -2 6181 5899 2174 148 11 0 chr10 7467034 7467385 -132849380 - THE1A LTR MaLR 0 355 1 276 289 115 19 chr10 7467431 7467587 -132849178 + MIR SINE MIR 25 195 -67 1918 138 17 17 chr10 7468186 7468483 -132848282 - AluJb SINE Alu -15 297 1 3650 55 2 4 chr10 7470362 7470819 -132845946 - L1PA8 LINE L1 0 6172 5717 467 221 131 14 chr10 7472488 7472633 -132844132 + MIR SINE MIR 29 190 -72 195 69 0 0 chr10 7472788 7472817 -132843948 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 758 239 75 25 chr10 7473879 7474159 -132842606 - L1MC4a LINE L1 -1779 6029 5736 260 91 0 0 chr10 7474284 7474317 -132842448 - U2 snRNA snRNA -155 33 1 2129 92 0 4 chr10 7474911 7475182 -132841583 - AluSq SINE Alu -5 308 39 1480 226 10 3 chr10 7476065 7476545 -132840220 - AluJb SINE Alu 0 482 1 908 159 0 0 chr10 7476547 7476679 -132840086 - AluJo/FLAM SINE Alu -180 132 1 198 0 0 0 chr10 7477557 7477579 -132839186 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1376 180 22 73 chr10 7478232 7478549 -132838216 + AluJb SINE Alu 1 301 -11 2132 100 21 0 chr10 7478735 7479026 -132837739 - AluSq SINE Alu -16 297 1 2120 117 0 20 chr10 7479606 7479905 -132836860 + AluSx SINE Alu 1 293 -19 276 268 107 18 chr10 7481535 7481647 -132835118 + MIR SINE MIR 21 142 -66 952 194 22 0 chr10 7482244 7482424 -132834341 - MER5A DNA MER1_type -4 185 2 2086 155 0 0 chr10 7484343 7484647 -132832118 + AluSx SINE Alu 1 304 -8 279 167 0 0 chr10 7484648 7484696 -132832069 - AluSp/q SINE Alu -6 297 250 1295 96 0 0 chr10 7484698 7484855 -132831910 - AluSx SINE Alu -147 165 9 650 337 36 36 chr10 7484976 7485442 -132831323 + L1ME3A LINE L1 5415 5880 -290 395 342 99 14 chr10 7491811 7492156 -132824609 - L2 LINE L2 -8 3305 2932 200 286 51 10 chr10 7492140 7492238 -132824527 - L2 LINE L2 -579 2735 2634 * 449 259 42 36 chr10 7492303 7492457 -132824308 - L2 LINE L2 -1420 1894 1737 2253 122 39 28 chr10 7492457 7492817 -132823948 - THE1B LTR MaLR 0 364 1 449 259 42 36 chr10 7492817 7492828 -132823937 - L2 LINE L2 -1577 1737 1728 841 152 15 0 chr10 7497013 7497145 -132819620 + AluJo SINE Alu 2 135 -177 428 171 0 11 chr10 7497147 7497235 -132819530 + (TATG)n Simple_repeat Simple_repeat 2 88 0 2124 141 33 33 chr10 7499071 7499434 -132817331 - THE1B LTR MaLR -1 363 1 3556 26 2 0 chr10 7500746 7501161 -132815604 - L1PA4 LINE L1 -3 6152 5737 1929 125 30 0 chr10 7501285 7501580 -132815185 + AluSq SINE Alu 1 304 -9 274 212 30 0 chr10 7502130 7502196 -132814569 - L1MC4 LINE L1 -133 7909 7842 548 158 24 4 chr10 7502196 7502363 -132814402 - MER46A DNA MER2_type 0 236 1 1766 106 0 4 chr10 7502366 7502612 -132814153 - AluSc SINE Alu -12 297 53 294 167 19 0 chr10 7502613 7502667 -132814098 - MER68 LTR ERV1 -503 59 5 362 239 23 0 chr10 7502689 7502777 -132813988 - L1MC4 LINE L1 -1455 6587 6498 591 258 150 41 chr10 7502934 7503184 -132813581 - LTR16A LTR ERVL -57 393 95 1853 126 0 54 chr10 7503184 7503501 -132813264 + AluSx SINE Alu 1 300 -12 591 258 150 41 chr10 7503501 7503591 -132813174 - LTR16A LTR ERVL -355 95 16 252 59 0 0 chr10 7504199 7504233 -132812532 + (T)n Simple_repeat Simple_repeat 1 34 0 1387 213 41 46 chr10 7505515 7505736 -132811029 - MLT1B LTR MaLR 0 390 170 1339 202 26 10 chr10 7505736 7506038 -132810727 - AluJo SINE Alu -1 311 5 1387 213 41 46 chr10 7506038 7506205 -132810560 - MLT1B LTR MaLR -220 170 4 212 0 36 0 chr10 7508654 7508682 -132808083 + (CA)n Simple_repeat Simple_repeat 2 30 0 258 304 43 35 chr10 7509615 7509730 -132807035 - MIR3 SINE MIR -12 196 81 630 242 60 64 chr10 7510428 7510753 -132806012 - MLT1B LTR MaLR -6 384 40 333 294 49 11 chr10 7512761 7512945 -132803820 - L1MDa LINE L1 -5625 915 725 1829 250 54 32 chr10 7512958 7513607 -132803158 - L1MDa LINE L1 -5867 673 11 2047 133 0 9 chr10 7514359 7514674 -132802091 + AluSx SINE Alu 1 312 0 1377 71 0 0 chr10 7515544 7515714 -132801051 - AluSq SINE Alu -18 295 126 401 223 40 68 chr10 7517000 7517148 -132799617 + L2 LINE L2 3170 3313 0 278 375 19 0 chr10 7517321 7517425 -132799340 + MIR SINE MIR 39 144 -64 186 43 0 0 chr10 7517528 7517551 -132799214 + (CAGAA)n Simple_repeat Simple_repeat 5 27 0 347 73 18 0 chr10 7518815 7518870 -132797895 + (TG)n Simple_repeat Simple_repeat 2 57 0 1671 166 17 7 chr10 7519210 7519512 -132797253 - AluJo SINE Alu -7 305 1 243 0 0 0 chr10 7520466 7520493 -132796272 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 2104 114 0 3 chr10 7520498 7520797 -132795968 - AluSx SINE Alu -14 298 1 201 365 111 8 chr10 7521124 7521250 -132795515 + MIR3 SINE MIR 17 155 -53 328 185 62 0 chr10 7525418 7525483 -132791282 - AluJ/FRAM SINE Alu -2 300 232 886 164 26 0 chr10 7525568 7525720 -132791045 - FRAM SINE Alu -21 155 1 275 296 211 13 chr10 7526565 7526717 -132790048 + MIR SINE MIR 20 201 -61 336 272 39 0 chr10 7527578 7527681 -132789084 - L1M4 LINE L1 -1023 5123 5017 1274 159 42 85 chr10 7527742 7528025 -132788740 + AluJo SINE Alu 7 277 -35 271 271 123 47 chr10 7528219 7528455 -132788310 - L1M4 LINE L1 -1248 4898 4645 383 264 0 21 chr10 7529100 7529210 -132787555 - L1ME2 LINE L1 -298 5866 5760 375 23 0 0 chr10 7529210 7529254 -132787511 + (CA)n Simple_repeat Simple_repeat 2 45 0 267 329 0 0 chr10 7529510 7529586 -132787179 - MIR SINE MIR -108 154 79 192 244 24 0 chr10 7530452 7530493 -132786272 - MIR SINE MIR -3 259 218 547 219 61 114 chr10 7530547 7530793 -132785972 + L2 LINE L2 3081 3313 0 * 559 256 149 14 chr10 7530767 7530982 -132785783 - MIR SINE MIR -6 256 13 184 287 41 98 chr10 7531316 7531438 -132785327 - MIR SINE MIR -6 256 142 295 333 72 0 chr10 7531511 7531622 -132785143 + L2 LINE L2 3139 3257 -15 305 303 0 35 chr10 7531784 7531926 -132784839 + C-rich Low_complexity Low_complexity 6 142 0 445 338 0 0 chr10 7532166 7532314 -132784451 + C-rich Low_complexity Low_complexity 1 148 0 774 157 0 0 chr10 7532427 7532787 -132783978 + GA-rich Low_complexity Low_complexity 1 360 0 195 330 0 34 chr10 7533283 7533371 -132783394 - MIR SINE MIR -74 188 104 2422 60 0 0 chr10 7533868 7534166 -132782599 - AluY SINE Alu -12 299 2 229 216 0 54 chr10 7534566 7534640 -132782125 + L1ME LINE L1 4577 4646 -1500 2288 135 16 16 chr10 7534708 7535072 -132781693 + THE1B LTR MaLR 1 364 0 258 32 0 0 chr10 7535273 7535304 -132781461 + (CA)n Simple_repeat Simple_repeat 2 32 0 311 301 38 38 chr10 7535581 7535714 -132781051 + L1ME LINE L1 5653 5785 -377 2058 116 13 10 chr10 7535838 7536149 -132780616 + AluSx SINE Alu 1 312 0 207 69 0 0 chr10 7536549 7536578 -132780187 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1132 174 64 138 chr10 7537297 7537628 -132779137 - MLT1B LTR MaLR 0 390 95 2369 73 0 0 chr10 7537628 7537930 -132778835 - AluSx SINE Alu -6 306 5 1132 174 64 138 chr10 7537930 7538018 -132778747 - MLT1B LTR MaLR -295 95 2 421 267 61 28 chr10 7538198 7538378 -132778387 - MER20B DNA MER1_type -83 700 515 930 127 40 0 chr10 7538424 7538597 -132778168 + L1MB8 LINE L1 5998 6177 -1 984 289 102 11 chr10 7538676 7539116 -132777649 - MER20B DNA MER1_type -268 515 36 2992 198 84 30 chr10 7539878 7540086 -132776679 - L1ME1 LINE L1 -1 6165 5970 2039 114 0 0 chr10 7540086 7540366 -132776399 + AluSx SINE Alu 22 301 -11 2992 198 84 30 chr10 7540366 7541336 -132775429 - L1ME1 LINE L1 -196 5970 4922 180 111 0 0 chr10 7541897 7541924 -132774841 + (ATG)n Simple_repeat Simple_repeat 1 27 0 562 269 44 0 chr10 7542189 7542349 -132774416 - MLT1G LTR MaLR 0 590 424 * 998 275 50 17 chr10 7542347 7542645 -132774120 - MLT1G LTR MaLR -271 319 12 251 157 12 36 chr10 7543307 7543390 -132773375 + CT-rich Low_complexity Low_complexity 1 81 0 200 254 51 0 chr10 7544320 7544379 -132772386 - MIR3 SINE MIR -50 158 97 2044 105 0 40 chr10 7544404 7544708 -132772057 + AluSx SINE Alu 17 308 -4 2319 103 0 0 chr10 7545531 7545832 -132770933 - AluSx SINE Alu -11 301 1 243 250 0 0 chr10 7545990 7546038 -132770727 + L2 LINE L2 3219 3266 -6 1312 144 0 10 chr10 7546058 7546252 -132770513 - AluJo SINE Alu -14 298 107 570 137 11 0 chr10 7546252 7546347 -132770418 - THE1C LTR MaLR -1 374 279 236 342 7 20 chr10 7546348 7546500 -132770265 + CT-rich Low_complexity Low_complexity 3 152 0 839 259 47 0 chr10 7547751 7547987 -132768778 + L1MB3 LINE L1 5934 6180 -3 351 0 0 0 chr10 7548248 7548287 -132768478 + (CA)n Simple_repeat Simple_repeat 2 40 0 825 168 14 7 chr10 7549174 7549317 -132767448 + FRAM SINE Alu 1 144 -32 315 0 0 0 chr10 7549317 7549352 -132767413 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2322 131 80 10 chr10 7550003 7550401 -132766364 + MSTA LTR MaLR 1 426 -2 2225 154 17 51 chr10 7550989 7551404 -132765361 - Tigger2a DNA MER2_type -33 401 1 2168 110 3 0 chr10 7551623 7551941 -132764824 + AluSq SINE Alu 1 319 0 1654 130 14 11 chr10 7552793 7553069 -132763696 - Tigger2a DNA MER2_type -157 277 1 690 131 0 25 chr10 7553220 7553342 -132763423 + AluJb SINE Alu 185 303 -9 725 254 23 9 chr10 7554343 7554560 -132762205 + L1MC5 LINE L1 7706 7925 -36 2453 54 40 3 chr10 7555063 7555361 -132761404 - AluY SINE Alu -2 309 1 5196 120 8 10 chr10 7555610 7556392 -132760373 - L1PA15 LINE L1 -69 6096 5317 2304 132 25 6 chr10 7556907 7557264 -132759501 + THE1B LTR MaLR 1 364 0 2281 71 40 17 chr10 7557349 7557645 -132759120 + AluYa5 SINE Alu 1 303 -8 2281 116 0 0 chr10 7558020 7558321 -132758444 - AluSg SINE Alu -9 301 1 255 229 125 0 chr10 7558911 7559007 -132757758 - HAL1 LINE L1 -1036 1471 1364 1961 103 0 66 chr10 7559352 7559693 -132757072 + AluSx SINE Alu 1 321 0 249 219 42 135 chr10 7559711 7559903 -132756862 + MLT1J LTR MaLR 1 174 -337 2318 99 0 28 chr10 7562102 7562424 -132754341 - AluSq SINE Alu 0 313 1 439 267 35 47 chr10 7564058 7564230 -132752535 - MIR SINE MIR -40 222 53 27 0 0 0 chr10 7564535 7564562 -132752203 + AT_rich Low_complexity Low_complexity 1 27 0 1411 132 15 0 chr10 7565002 7565199 -132751566 - AluJo SINE Alu -26 286 87 2276 89 4 0 chr10 7565395 7565709 -132751056 + AluY SINE Alu 1 315 0 795 214 199 47 chr10 7566225 7566469 -132750296 - Charlie2 DNA MER1_type -3 2859 2653 2340 98 0 13 chr10 7566469 7566785 -132749980 + AluSx SINE Alu 1 312 0 795 214 199 47 chr10 7566785 7567053 -132749712 - Charlie2 DNA MER1_type -209 2653 2269 312 271 88 39 chr10 7567130 7567311 -132749454 - Charlie2 DNA MER1_type -2571 211 22 1387 203 75 11 chr10 7567347 7567722 -132749043 - Zaphod DNA AcHobo -37 3994 3596 1399 230 167 97 chr10 7567723 7568210 -132748555 - Zaphod DNA AcHobo -3043 988 537 1880 134 0 7 chr10 7568210 7568501 -132748264 + AluSg1 SINE Alu 15 303 0 1399 230 167 97 chr10 7568501 7568934 -132747831 - Zaphod DNA AcHobo -3494 537 2 2048 109 11 18 chr10 7569058 7569383 -132747382 - AluSx SINE Alu 0 323 1 1399 206 23 99 chr10 7569890 7570332 -132746433 + MLT2D LTR ERVL 7 414 0 223 288 41 0 chr10 7572597 7572670 -132744095 + MIR SINE MIR 121 196 -66 1853 166 7 3 chr10 7572797 7573098 -132743667 + AluJb SINE Alu 1 302 -10 36 53 0 0 chr10 7573558 7573615 -132743150 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr10 7573900 7573924 -132742841 + AT_rich Low_complexity Low_complexity 1 24 0 212 259 137 58 chr10 7575610 7575661 -132741104 - MIR3 SINE MIR -14 194 148 2501 77 16 56 chr10 7575661 7575966 -132740799 + THE1B LTR MaLR 1 290 -74 2352 76 3 0 chr10 7575966 7576257 -132740508 - AluSg SINE Alu -18 292 1 2501 77 16 56 chr10 7576257 7576329 -132740436 + THE1B LTR MaLR 290 363 -1 212 259 137 58 chr10 7576329 7576416 -132740349 - MIR3 SINE MIR -60 148 45 1843 186 60 35 chr10 7578165 7578596 -132738169 + L1MB7 LINE L1 5728 6169 -15 907 184 61 10 chr10 7579377 7579573 -132737192 - MER20B DNA MER1_type 0 219 14 268 93 0 0 chr10 7579681 7579724 -132737041 - L1PA2 LINE L1 0 6155 6113 236 217 0 66 chr10 7579893 7579999 -132736766 + CT-rich Low_complexity Low_complexity 1 99 0 948 201 56 42 chr10 7580636 7580924 -132735841 - MER33 DNA MER1_type -14 310 19 650 213 31 0 chr10 7581660 7581787 -132734978 + FLAM_A SINE Alu 3 133 0 1909 141 0 24 chr10 7582480 7582778 -132733987 - AluJb SINE Alu -21 291 1 2192 129 0 10 chr10 7583727 7584038 -132732727 - AluSx SINE Alu -4 308 1 2311 91 30 0 chr10 7584532 7584829 -132731936 - AluSx SINE Alu -6 306 1 1684 169 77 66 chr10 7585616 7586043 -132730722 + MSTB1 LTR MaLR 1 432 0 2015 147 7 0 chr10 7586593 7586899 -132729866 + AluSx SINE Alu 1 308 -4 450 0 0 0 chr10 7588363 7588413 -132728352 + (CA)n Simple_repeat Simple_repeat 1 50 0 2176 86 0 40 chr10 7589050 7589352 -132727413 + AluY SINE Alu 22 311 0 2451 75 3 3 chr10 7589501 7589807 -132726958 + AluSc SINE Alu 1 306 -3 3640 113 0 52 chr10 7589915 7590471 -132726294 - MER1A DNA MER1_type 0 527 1 1903 166 103 35 chr10 7590655 7591052 -132725713 - MLT2B1 LTR ERVL -95 425 2 2150 121 7 0 chr10 7591620 7591909 -132724856 - AluSx SINE Alu -19 293 3 304 217 0 0 chr10 7592957 7593017 -132723748 + MIR3 SINE MIR 133 192 -16 290 323 155 0 chr10 7594024 7594179 -132722586 + MIR SINE MIR 2 180 -82 180 176 0 0 chr10 7594208 7594242 -132722523 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 257 291 27 9 chr10 7594755 7594865 -132721900 + HAL1 LINE L1 1744 1855 -652 1046 215 89 15 chr10 7594897 7595057 -132721708 + HAL1 LINE L1 2043 2190 -317 426 20 0 0 chr10 7595057 7595108 -132721657 + (TG)n Simple_repeat Simple_repeat 1 51 0 1046 215 89 15 chr10 7595108 7595272 -132721493 + HAL1 LINE L1 2190 2391 -116 24 0 0 0 chr10 7595304 7595328 -132721437 + AT_rich Low_complexity Low_complexity 1 24 0 466 261 76 53 chr10 7595558 7595657 -132721108 - L1ME1 LINE L1 0 6162 6067 679 159 0 0 chr10 7595657 7595764 -132721001 + U6 snRNA snRNA 1 107 0 1579 139 58 0 chr10 7595764 7596023 -132720742 + L1PB4 LINE L1 5880 6153 -3 466 261 76 53 chr10 7596023 7596315 -132720450 - L1ME1 LINE L1 -94 6068 5761 25 0 0 0 chr10 7598065 7598090 -132718675 + AT_rich Low_complexity Low_complexity 1 25 0 205 75 75 0 chr10 7598176 7598216 -132718549 + T-rich Low_complexity Low_complexity 4 46 0 792 181 181 16 chr10 7599481 7599669 -132717096 - MER20 DNA MER1_type 0 219 1 817 144 0 0 chr10 7599934 7600052 -132716713 - FLAM_C SINE Alu -22 121 4 2293 104 3 3 chr10 7600070 7600369 -132716396 - AluSq SINE Alu -14 299 1 222 241 0 19 chr10 7600591 7600645 -132716120 + CT-rich Low_complexity Low_complexity 4 56 0 264 30 0 0 chr10 7601021 7601054 -132715711 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 475 189 57 0 chr10 7602012 7602118 -132714647 + MIR SINE MIR 53 164 -98 2068 131 0 31 chr10 7602643 7602964 -132713801 - AluSx SINE Alu -1 311 1 686 214 0 0 chr10 7603475 7603592 -132713173 + FLAM_A SINE Alu 13 129 -13 213 119 0 0 chr10 7603615 7603657 -132713108 + (GA)n Simple_repeat Simple_repeat 2 43 0 320 283 82 61 chr10 7603657 7604194 -132712571 + L1ME LINE L1 5270 5829 -292 2176 152 17 6 chr10 7604581 7604942 -132711823 - MLT1A1 LTR MaLR 0 365 1 2266 110 0 3 chr10 7605322 7605622 -132711143 - AluSx SINE Alu -13 299 1 39 0 0 0 chr10 7605751 7605790 -132710975 + AT_rich Low_complexity Low_complexity 1 39 0 407 130 413 0 chr10 7605790 7605882 -132710883 - AluJo SINE Alu -176 136 7 22 0 0 0 chr10 7605882 7605904 -132710861 + AT_rich Low_complexity Low_complexity 1 22 0 1823 112 0 0 chr10 7607518 7607767 -132708998 + AluSx SINE Alu 64 312 0 2183 92 0 62 chr10 7608189 7608514 -132708251 + AluSq SINE Alu 1 305 -8 2057 133 18 33 chr10 7608593 7609090 -132707675 - L1MB7 LINE L1 -175 6009 2806 2388 178 71 11 chr10 7609303 7609769 -132706996 + MLT1D LTR MaLR 12 505 0 547 306 104 0 chr10 7609833 7610055 -132706710 + MIR SINE MIR 12 256 -6 3122 230 29 52 chr10 7610739 7612155 -132704610 - L1M4 LINE L1 -1053 5093 3813 2095 328 38 23 chr10 7612238 7613366 -132703399 - HERV16 LTR ERVL -1916 3080 2262 2069 126 11 3 chr10 7613615 7613901 -132702864 - AluSx SINE Alu -20 292 5 420 290 150 34 chr10 7614399 7614751 -132702014 + L1ME LINE L1 5378 5699 -463 244 308 0 0 chr10 7614784 7614862 -132701903 + L1ME LINE L1 5814 5891 -279 772 204 38 6 chr10 7614862 7615051 -132701714 - MLT1D LTR MaLR -4 545 311 512 197 33 40 chr10 7615120 7615272 -132701493 - MLT1D LTR MaLR -351 154 4 238 309 12 0 chr10 7615387 7615468 -132701297 + MLT1J LTR MaLR 120 201 -310 186 43 0 0 chr10 7615552 7615575 -132701190 + (A)n Simple_repeat Simple_repeat 1 23 0 3648 74 2 4 chr10 7616791 7617262 -132699503 - L1PA10 LINE L1 -8 6160 5691 244 354 0 0 chr10 7617326 7617439 -132699326 + CT-rich Low_complexity Low_complexity 5 117 0 183 42 0 0 chr10 7617807 7617831 -132698934 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1678 146 13 73 chr10 7618052 7618367 -132698398 + AluJb SINE Alu 1 296 -16 1220 124 295 8 chr10 7618407 7618641 -132698124 + AluSq SINE Alu 2 302 -1 440 134 24 0 chr10 7618664 7618746 -132698019 + GA-rich Low_complexity Low_complexity 4 87 0 238 257 81 14 chr10 7618794 7618868 -132697897 - MIR3 SINE MIR -41 167 89 1432 107 65 0 chr10 7619048 7619264 -132697501 - MER30 DNA MER1_type 0 230 1 234 366 37 8 chr10 7619340 7619474 -132697291 + L2 LINE L2 3126 3263 -9 2349 82 3 0 chr10 7619809 7620102 -132696663 + AluSq SINE Alu 1 294 -19 2255 108 0 3 chr10 7620220 7620517 -132696248 - AluSc SINE Alu -13 296 1 774 84 0 0 chr10 7620906 7621013 -132695752 + (TCCC)n Simple_repeat Simple_repeat 4 110 0 1560 183 39 7 chr10 7621013 7621290 -132695475 - AluJo SINE Alu -23 289 1 256 24 49 0 chr10 7621862 7621903 -132694862 + (TA)n Simple_repeat Simple_repeat 1 43 0 1913 42 8 4 chr10 7621903 7622132 -132694633 - L1PA5 LINE L1 -5 6149 5917 433 82 16 0 chr10 7622132 7622193 -132694572 + L1PA5 LINE L1 5855 5916 -238 301 309 55 0 chr10 7622949 7623059 -132693706 - L2 LINE L2 0 3313 3198 797 284 120 12 chr10 7623714 7624055 -132692710 - LTR16C LTR ERVL -7 484 107 281 188 0 88 chr10 7624309 7624333 -132692432 - MLT1J1 LTR MaLR -22 424 399 2079 129 3 0 chr10 7624333 7624627 -132692138 + AluSx SINE Alu 1 295 -17 281 188 0 88 chr10 7624627 7624682 -132692083 - MLT1J1 LTR MaLR -47 399 352 2304 97 7 0 chr10 7625086 7625394 -132691371 + AluY SINE Alu 1 310 -1 24 32 0 0 chr10 7625621 7625652 -132691113 + AT_rich Low_complexity Low_complexity 1 31 0 388 287 70 0 chr10 7626737 7626866 -132689899 - MIR SINE MIR -31 231 94 649 135 8 71 chr10 7627189 7627315 -132689450 + FLAM_C SINE Alu 1 118 -15 396 278 0 0 chr10 7627426 7627534 -132689231 - MIR SINE MIR -66 196 89 1012 249 82 33 chr10 7627597 7627710 -132689055 + LTR40b LTR ERVL 73 179 -283 2027 188 5 5 chr10 7627710 7628094 -132688671 - L1PB4 LINE L1 -4 6152 5769 3895 122 27 42 chr10 7628094 7628759 -132688006 - L1PA13 LINE L1 0 6163 5509 1012 249 82 33 chr10 7628759 7629072 -132687693 + LTR40b LTR ERVL 178 462 0 276 338 0 0 chr10 7629072 7629152 -132687613 - MIR SINE MIR -171 91 12 189 382 24 18 chr10 7629164 7629329 -132687436 - L2 LINE L2 -188 3084 2919 1854 141 48 7 chr10 7629511 7629802 -132686963 + AluSx SINE Alu 1 303 -9 2185 86 7 30 chr10 7630343 7630645 -132686120 - AluSp SINE Alu 0 313 19 577 259 57 57 chr10 7630990 7631183 -132685582 + MLT1L LTR MaLR 24 216 -399 2152 140 7 0 chr10 7631456 7631763 -132685002 + AluSx SINE Alu 1 309 -3 688 136 0 19 chr10 7632714 7632817 -132683948 - Tigger7 DNA MER2_type 0 2487 2387 1435 224 11 0 chr10 7632818 7633082 -132683683 - Tigger7 DNA MER2_type -466 267 1 618 253 31 41 chr10 7633084 7633659 -132683106 - L1MCc LINE L1 -4795 2146 1263 890 139 0 8 chr10 7633883 7634012 -132682753 + AluJb SINE Alu 164 291 -21 285 266 87 49 chr10 7634427 7634611 -132682154 - L1MCc LINE L1 -6219 204 14 215 79 26 0 chr10 7634786 7634824 -132681941 + (TA)n Simple_repeat Simple_repeat 2 40 0 1801 143 68 0 chr10 7634833 7635126 -132681639 + AluSx SINE Alu 1 311 0 797 298 82 70 chr10 7635249 7635833 -132680932 + L1MC4a LINE L1 5311 5901 -1907 1748 167 7 24 chr10 7635994 7636287 -132680478 + AluJb SINE Alu 4 291 -21 269 201 0 170 chr10 7638215 7638396 -132678369 + Charlie7 DNA MER1_type 2451 2599 -13 1557 165 0 92 chr10 7638396 7638544 -132678221 + AluJo SINE Alu 6 109 -203 2203 117 7 0 chr10 7638544 7638844 -132677921 + AluSp SINE Alu 1 302 -11 1557 165 0 92 chr10 7638844 7639022 -132677743 + AluJo SINE Alu 109 302 -10 269 201 0 170 chr10 7639022 7639034 -132677731 + Charlie7 DNA MER1_type 2599 2611 -1 370 211 117 16 chr10 7639529 7639657 -132677108 - Charlie1 DNA MER1_type 0 2761 2621 2325 100 0 0 chr10 7641434 7641744 -132675021 - AluSx SINE Alu 0 312 3 356 297 97 26 chr10 7641847 7642002 -132674763 + MIR SINE MIR 20 185 -77 1615 142 64 28 chr10 7642119 7642401 -132674364 - AluJo SINE Alu -20 292 1 317 244 8 3 chr10 7642855 7642936 -132673829 - AluJ/FLAM SINE Alu -238 64 1 1751 158 44 10 chr10 7642966 7643264 -132673501 + AluJb SINE Alu 1 308 -4 270 0 0 0 chr10 7643530 7643560 -132673205 + (CA)n Simple_repeat Simple_repeat 2 31 0 1037 139 0 6 chr10 7644434 7644592 -132672173 + AluSg/x SINE Alu 130 286 -23 21 0 0 0 chr10 7644592 7644613 -132672152 + AT_rich Low_complexity Low_complexity 1 21 0 549 345 24 5 chr10 7644840 7645049 -132671716 + MIR SINE MIR 49 261 -1 274 238 83 0 chr10 7645087 7645171 -132671594 - MIR SINE MIR -50 212 122 2151 111 0 0 chr10 7646170 7646467 -132670298 - AluSg SINE Alu -13 297 1 255 61 0 0 chr10 7646769 7646802 -132669963 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 1940 160 0 0 chr10 7647176 7647482 -132669283 + AluSx SINE Alu 1 306 -6 410 291 45 8 chr10 7647961 7648095 -132668670 + MIR SINE MIR 68 206 -56 2033 95 65 3 chr10 7648233 7648527 -132668238 + AluSx SINE Alu 1 312 0 197 264 226 9 chr10 7649909 7650015 -132666750 + MIR SINE MIR 84 212 -50 1762 149 7 19 chr10 7650361 7650670 -132666095 + AluJb SINE Alu 1 305 -7 2542 39 0 3 chr10 7651702 7652014 -132664751 - AluY SINE Alu 0 311 1 194 328 8 74 chr10 7652643 7652684 -132664081 + MIR3 SINE MIR 47 89 -119 2138 106 0 0 chr10 7652684 7652985 -132663780 + AluSx SINE Alu 5 305 -7 194 328 8 74 chr10 7652985 7653065 -132663700 + MIR3 SINE MIR 89 160 -48 574 244 144 12 chr10 7653065 7653225 -132663540 - MER5A DNA MER1_type 0 189 9 641 318 55 25 chr10 7653865 7653936 -132662829 + MIR SINE MIR 34 101 -161 415 95 24 83 chr10 7653936 7654020 -132662745 - MADE1 DNA Mariner -1 79 1 641 318 55 25 chr10 7654020 7654149 -132662616 + MIR SINE MIR 101 240 -22 2145 128 0 0 chr10 7654395 7654707 -132662058 + AluSx SINE Alu 1 312 0 1976 92 20 33 chr10 7654733 7655039 -132661726 + AluSx SINE Alu 2 303 -9 673 171 0 0 chr10 7655054 7655159 -132661606 + FLAM_A SINE Alu 23 127 -15 22 35 0 0 chr10 7655190 7655219 -132661546 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 7655585 7655610 -132661155 + AT_rich Low_complexity Low_complexity 1 25 0 963 300 101 31 chr10 7657633 7658380 -132658385 - L2 LINE L2 -2 3311 2513 206 157 0 39 chr10 7659478 7659529 -132657236 + CT-rich Low_complexity Low_complexity 3 51 0 311 270 114 28 chr10 7659987 7660055 -132656710 - MIR3 SINE MIR -40 222 161 2120 123 0 0 chr10 7660055 7660356 -132656409 - AluSg SINE Alu -9 301 1 311 270 114 28 chr10 7660356 7660498 -132656267 - MIR3 SINE MIR -101 161 5 875 165 6 19 chr10 7660537 7660695 -132656070 - FRAM SINE Alu -21 155 1 265 279 0 0 chr10 7661308 7661369 -132655396 + GA-rich Low_complexity Low_complexity 4 64 0 243 255 4 31 chr10 7661374 7661447 -132655318 - MIR3 SINE MIR -132 76 15 3473 84 24 0 chr10 7661647 7662101 -132654664 - Charlie3 DNA MER1_type -4 2706 2242 2950 107 34 2 chr10 7662086 7662498 -132654267 - Charlie3 DNA MER1_type -2199 511 87 * 509 284 47 30 chr10 7662515 7662684 -132654081 + MIR SINE MIR 63 234 -28 890 292 4 25 chr10 7662969 7663212 -132653553 + MIR SINE MIR 24 261 -1 450 280 106 24 chr10 7663673 7663802 -132652963 + L3 LINE CR1 1343 1497 -80 2119 113 30 88 chr10 7663802 7664200 -132652565 + THE1C LTR MaLR 1 375 0 450 280 106 24 chr10 7664200 7664277 -132652488 + L3 LINE CR1 1497 1566 -11 694 224 82 56 chr10 7664492 7664815 -132651950 + L2 LINE L2 2929 3307 -6 23 0 0 0 chr10 7665274 7665297 -132651468 + AT_rich Low_complexity Low_complexity 1 23 0 1778 157 7 0 chr10 7665805 7666092 -132650673 - AluJo SINE Alu -21 291 3 2124 111 0 29 chr10 7666752 7667067 -132649698 - AluSx SINE Alu -6 306 1 528 264 49 0 chr10 7667616 7667760 -132649005 - MIR3 SINE MIR -30 178 28 204 125 0 0 chr10 7671489 7671521 -132645244 + (CA)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 7671528 7671556 -132645209 + (A)n Simple_repeat Simple_repeat 1 28 0 235 167 14 28 chr10 7671623 7671695 -132645070 + (CGAG)n Simple_repeat Simple_repeat 2 72 0 200 206 0 0 chr10 7671864 7671898 -132644867 + A-rich Low_complexity Low_complexity 5 38 0 202 200 0 0 chr10 7672545 7672580 -132644185 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 283 76 62 chr10 7676769 7676914 -132639851 + MIR3 SINE MIR 13 159 -49 21 0 0 0 chr10 7678483 7678504 -132638261 + AT_rich Low_complexity Low_complexity 1 21 0 874 189 17 0 chr10 7678518 7678698 -132638067 - L1MA4 LINE L1 -7 6293 6111 371 273 163 17 chr10 7678707 7678879 -132637886 - MIR SINE MIR -18 244 48 1827 142 3 0 chr10 7678949 7679260 -132637505 - AluSx SINE Alu 0 312 1 2266 102 0 0 chr10 7681466 7681770 -132634995 - AluSx SINE Alu -8 304 1 2345 74 3 13 chr10 7683089 7683400 -132633365 + AluSx SINE Alu 1 308 -4 3059 40 0 21 chr10 7685554 7685932 -132630833 - L1PA5 LINE L1 -1 6153 5784 435 283 72 32 chr10 7686218 7686357 -132630408 + HAL1 LINE L1 651 806 -1701 1871 109 6 45 chr10 7686357 7686668 -132630097 - AluSx SINE Alu -13 299 1 435 283 72 32 chr10 7686668 7686779 -132629986 + HAL1 LINE L1 806 911 -1596 836 216 180 41 chr10 7686795 7687212 -132629553 + HAL1 LINE L1 942 1416 -1091 920 280 140 36 chr10 7687229 7687325 -132629440 + HAL1 LINE L1 1486 1571 -936 1378 147 151 8 chr10 7687325 7687584 -132629181 - AluSg1 SINE Alu -13 296 1 920 280 140 36 chr10 7687584 7688008 -132628757 + HAL1 LINE L1 1571 2060 -447 261 287 61 93 chr10 7688126 7688373 -132628392 + HAL1 LINE L1 2267 2505 -2 1329 119 106 0 chr10 7688392 7688619 -132628146 + AluJb SINE Alu 51 301 -11 278 255 39 10 chr10 7688643 7688745 -132628020 - MLT1J LTR MaLR -7 504 400 355 275 218 26 chr10 7688843 7689036 -132627729 - MLT1J LTR MaLR -281 230 1 2037 112 7 3 chr10 7689290 7689584 -132627181 + AluSx SINE Alu 1 295 -17 470 91 13 0 chr10 7689585 7689662 -132627103 + (TA)n Simple_repeat Simple_repeat 1 78 0 314 279 211 32 chr10 7689765 7690073 -132626692 + L1ME4a LINE L1 5007 5369 -777 2173 95 3 0 chr10 7690091 7690386 -132626379 - AluSx SINE Alu -14 298 3 521 286 48 31 chr10 7690501 7690791 -132625974 + L1ME4a LINE L1 5590 5884 -237 2292 88 0 0 chr10 7691138 7691435 -132625330 - AluSg SINE Alu -13 297 1 207 69 0 0 chr10 7691494 7691523 -132625242 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1986 119 0 0 chr10 7691525 7691803 -132624962 - AluSx SINE Alu -34 278 1 589 210 80 7 chr10 7692402 7692540 -132624225 - MER3 DNA MER1_type -24 185 38 282 308 60 17 chr10 7692821 7692938 -132623827 - MIR3 SINE MIR -6 202 81 678 131 10 0 chr10 7693949 7694048 -132622717 + AluSq/x SINE Alu 5 104 -208 961 150 6 12 chr10 7694221 7694388 -132622377 + AluSq SINE Alu 119 284 -29 405 0 0 0 chr10 7694388 7694433 -132622332 + (CAT)n Simple_repeat Simple_repeat 2 46 0 595 262 35 79 chr10 7694443 7694672 -132622093 + L2 LINE L2 3092 3310 -3 1942 107 7 58 chr10 7694797 7695107 -132621658 - AluSx SINE Alu -14 298 5 631 280 75 0 chr10 7695772 7695958 -132620807 + MIR SINE MIR 15 214 -48 1598 146 4 0 chr10 7696161 7696407 -132620358 - AluSx SINE Alu -39 273 27 2312 60 13 3 chr10 7696743 7697042 -132619723 - AluY SINE Alu -9 302 1 2354 99 0 0 chr10 7698518 7698831 -132617934 - AluSp SINE Alu 0 313 1 720 166 0 65 chr10 7699406 7699545 -132617220 - FLAM_A SINE Alu -3 130 1 2042 130 0 0 chr10 7700340 7700632 -132616133 - AluSx SINE Alu -20 292 1 237 250 0 0 chr10 7701159 7701207 -132615558 - MLT1I LTR MaLR -16 393 346 240 261 80 57 chr10 7701325 7701413 -132615352 - MLT1J LTR MaLR -312 199 110 563 51 26 0 chr10 7701641 7701719 -132615046 + (TATG)n Simple_repeat Simple_repeat 4 83 0 1574 198 7 0 chr10 7701719 7702002 -132614763 - AluJb SINE Alu -27 285 1 453 260 81 98 chr10 7703629 7703864 -132612901 - MIR SINE MIR -19 243 13 344 220 43 0 chr10 7703924 7704065 -132612700 + (CA)n Simple_repeat Simple_repeat 2 148 0 1959 256 59 24 chr10 7754743 7755318 -132561447 - MLT1G1 LTR MaLR 0 595 1 2216 98 0 3 chr10 7756618 7756903 -132559862 + AluSx SINE Alu 21 304 -8 2374 124 8 8 chr10 7760140 7760495 -132556270 - THE1A LTR MaLR 0 355 1 553 219 231 0 chr10 7760798 7760967 -132555798 + MIR SINE MIR 5 212 -50 410 103 19 159 chr10 7761176 7761250 -132555515 + MLT1C LTR MaLR 3 59 -408 2130 143 0 6 chr10 7761250 7761564 -132555201 - AluSx SINE Alu 0 312 1 410 103 19 159 chr10 7761564 7761596 -132555169 + MLT1C LTR MaLR 59 94 -373 1274 129 0 6 chr10 7761596 7761774 -132554991 + AluSg/x SINE Alu 118 294 -16 1335 195 96 9 chr10 7761774 7762108 -132554657 + MLT1C LTR MaLR 102 464 -3 351 323 63 24 chr10 7763344 7763763 -132553002 + MER113 DNA MER1_type? 2 471 -50 1436 107 4 36 chr10 7765598 7765828 -132550937 - L1P LINE L1 -1275 4871 4648 1257 65 24 0 chr10 7765828 7765994 -132550771 + L1PA8 LINE L1 5997 6168 -4 1436 107 4 36 chr10 7765994 7766016 -132550749 - L1P LINE L1 -1498 4648 4627 685 153 0 0 chr10 7766262 7766360 -132550405 - AluS SINE Alu -214 99 2 2185 134 0 0 chr10 7766510 7766815 -132549950 - AluSx SINE Alu -6 306 2 2123 98 33 0 chr10 7767434 7767746 -132549019 - AluSq SINE Alu 0 321 1 200 288 0 17 chr10 7768642 7768701 -132548064 + GA-rich Low_complexity Low_complexity 3 60 0 192 77 0 0 chr10 7768702 7768728 -132548037 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 883 181 7 13 chr10 7768741 7768896 -132547869 + FRAM SINE Alu 6 159 -17 2373 113 0 0 chr10 7769017 7769327 -132547438 - AluSx SINE Alu -2 310 1 1942 193 33 0 chr10 7769400 7769737 -132547028 - MER7A DNA MER2_type 0 346 1 2538 52 0 3 chr10 7769877 7770182 -132546583 + AluY SINE Alu 1 304 -7 2169 110 3 10 chr10 7770191 7770499 -132546266 + AluSc SINE Alu 1 306 -3 4196 135 34 1 chr10 7771750 7772404 -132544361 - L1PA15 LINE L1 -2 6163 5489 242 139 0 0 chr10 7772627 7772663 -132544102 - MER58 DNA MER1_type -2 2418 2383 2108 116 20 0 chr10 7773387 7773681 -132543084 + AluSx SINE Alu 7 306 -6 631 321 102 42 chr10 7773906 7774572 -132542193 + L1MEd LINE L1 26 731 -5388 1764 52 5 5 chr10 7774620 7774832 -132541933 + AluY SINE Alu 1 212 -99 2353 122 0 3 chr10 7775332 7775643 -132541122 - AluSx SINE Alu -2 310 1 930 213 22 0 chr10 7775736 7775919 -132540846 + MER7A DNA MER2_type 1 185 -161 246 302 32 0 chr10 7776308 7776371 -132540394 + MIR SINE MIR 70 134 -74 193 214 36 18 chr10 7776383 7776439 -132540326 + L2 LINE L2 3220 3276 -37 277 279 0 10 chr10 7777829 7777933 -132538832 + G-rich Low_complexity Low_complexity 5 107 0 2203 115 0 0 chr10 7778802 7779097 -132537668 - AluSc SINE Alu -14 295 1 454 271 56 124 chr10 7779409 7779748 -132537017 + L2 LINE L2 2858 3162 -110 2169 124 0 0 chr10 7779748 7780069 -132536696 - AluSc SINE Alu 0 309 3 454 271 56 124 chr10 7780069 7780172 -132536593 + L2 LINE L2 3162 3270 -2 226 124 56 34 chr10 7780317 7780406 -132536359 + (CAGAGA)n Simple_repeat Simple_repeat 4 94 0 387 282 132 80 chr10 7781434 7781995 -132534770 + L1M2 LINE L1 535 1124 -5725 234 294 11 76 chr10 7782583 7782675 -132534090 + L3b LINE CR1 1398 1483 -100 1018 133 0 19 chr10 7783205 7783363 -132533402 + FRAM SINE Alu 22 176 0 2138 97 0 7 chr10 7783838 7784117 -132532648 + AluSc SINE Alu 1 277 -32 243 61 0 0 chr10 7784117 7784150 -132532615 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2038 121 10 20 chr10 7784871 7785176 -132531589 + AluSx SINE Alu 1 302 -10 23 54 0 0 chr10 7786314 7786351 -132530414 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr10 7786655 7786681 -132530084 + AT_rich Low_complexity Low_complexity 1 26 0 1359 174 5 0 chr10 7789515 7789739 -132527026 - AluJo SINE Alu -3 309 85 1892 160 0 17 chr10 7789955 7790248 -132526517 - AluJb SINE Alu -19 293 6 24 32 0 0 chr10 7790988 7791019 -132525746 + AT_rich Low_complexity Low_complexity 1 31 0 1759 190 5 42 chr10 7791183 7791402 -132525363 - MLT1A1 LTR MaLR 0 365 139 195 69 0 0 chr10 7791402 7791431 -132525334 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 2089 112 0 4 chr10 7791431 7791708 -132525057 - AluSc SINE Alu -33 276 1 1759 190 5 42 chr10 7791708 7791866 -132524899 - MLT1A1 LTR MaLR -224 141 1 255 212 59 59 chr10 7792406 7792491 -132524274 + MIR SINE MIR 52 136 -72 21 0 0 0 chr10 7792664 7792685 -132524080 + AT_rich Low_complexity Low_complexity 1 21 0 331 247 0 72 chr10 7795970 7796067 -132520698 + L1MC4 LINE L1 6614 6703 -1339 182 125 0 50 chr10 7796077 7796117 -132520648 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 329 274 48 0 chr10 7796122 7796206 -132520559 - L1MC4 LINE L1 -1340 6702 6615 521 189 11 28 chr10 7796240 7796420 -132520345 + (CATA)n Simple_repeat Simple_repeat 2 178 0 318 297 11 22 chr10 7796426 7796517 -132520248 + L1MC4 LINE L1 6614 6703 -1339 224 163 0 23 chr10 7796517 7796560 -132520205 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 313 264 23 11 chr10 7796565 7796652 -132520113 + L1MC4 LINE L1 6615 6702 -1340 326 217 33 65 chr10 7796666 7796758 -132520007 - L1MC4 LINE L1 -1340 6702 6614 318 192 10 144 chr10 7796671 7796775 -132519990 + L1MC4 LINE L1 6614 6703 -1339 * 210 136 34 17 chr10 7796779 7796838 -132519927 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 323 176 0 137 chr10 7796881 7796983 -132519782 + L1MC4 LINE L1 6616 6703 -1339 195 129 0 0 chr10 7796983 7797014 -132519751 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1673 160 29 13 chr10 7797568 7797861 -132518904 + AluJo SINE Alu 1 302 -10 1284 44 0 22 chr10 7797861 7798044 -132518721 + (GAA)n Simple_repeat Simple_repeat 2 180 0 1673 160 29 13 chr10 7798044 7798056 -132518709 + AluJo SINE Alu 302 312 0 240 59 0 0 chr10 7798442 7798476 -132518289 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2085 71 0 4 chr10 7798477 7798746 -132518019 - L1PA5 LINE L1 -16 6138 5871 873 151 0 0 chr10 7798871 7799010 -132517755 + AluSg/x SINE Alu 155 293 -17 292 256 47 23 chr10 7799013 7799099 -132517666 + MIR SINE MIR 116 203 -59 2307 92 0 6 chr10 7800128 7800442 -132516323 - AluSq SINE Alu -1 312 1 329 303 96 34 chr10 7800498 7800676 -132516089 - MIR SINE MIR -71 191 3 317 322 109 12 chr10 7800944 7801154 -132515611 - MIR SINE MIR -11 251 21 2079 113 7 0 chr10 7801742 7802044 -132514721 - AluJo SINE Alu -8 304 1 1621 176 25 67 chr10 7802388 7802530 -132514235 + MER2 DNA MER2_type 1 147 -197 2226 113 0 0 chr10 7802530 7802840 -132513925 - AluSx SINE Alu -2 310 1 1621 176 25 67 chr10 7802840 7803056 -132513709 + MER2 DNA MER2_type 147 344 0 2218 114 0 0 chr10 7803895 7804201 -132512564 - AluSq SINE Alu -7 306 1 1839 147 6 28 chr10 7804508 7804827 -132511938 + AluJo SINE Alu 1 312 0 817 140 26 72 chr10 7804967 7805153 -132511612 + L1MB2 LINE L1 5987 6177 -12 27 0 0 0 chr10 7805550 7805577 -132511188 + AT_rich Low_complexity Low_complexity 1 27 0 2400 73 0 6 chr10 7805635 7805948 -132510817 + AluY SINE Alu 1 311 0 399 258 25 50 chr10 7806332 7806452 -132510313 - MIR SINE MIR -73 189 73 1637 161 17 14 chr10 7807155 7807447 -132509318 - AluJo SINE Alu -19 293 1 1118 337 94 18 chr10 7808208 7808822 -132507943 - L3 LINE CR1 -5 1572 912 453 275 19 16 chr10 7808831 7808999 -132507766 + MIR SINE MIR 30 195 -13 816 277 113 12 chr10 7809029 7809365 -132507400 + MLT1J LTR MaLR 87 456 -55 269 292 135 0 chr10 7809407 7809503 -132507262 + MIR SINE MIR 150 258 -4 330 301 45 85 chr10 7809854 7810100 -132506665 - L3 LINE CR1 -825 752 517 330 292 96 78 chr10 7810489 7810641 -132506124 - MIR SINE MIR -15 247 88 2217 100 3 0 chr10 7810641 7810940 -132505825 + AluSp SINE Alu 1 300 -13 330 292 96 78 chr10 7810940 7811006 -132505759 - MIR SINE MIR -174 88 25 2165 106 3 0 chr10 7811524 7811817 -132504948 - AluSx SINE Alu -18 294 1 1256 107 0 0 chr10 7812376 7812544 -132504221 + AluSx SINE Alu 1 168 -144 819 158 92 30 chr10 7812644 7812808 -132503957 - MER1B DNA MER1_type -85 212 39 1635 156 7 24 chr10 7812852 7813147 -132503618 - AluJb SINE Alu -22 290 1 200 299 45 45 chr10 7813787 7813854 -132502911 - L2 LINE L2 -5 3308 3242 189 0 0 0 chr10 7813998 7814019 -132502746 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 353 355 24 8 chr10 7814019 7814143 -132502622 - L2 LINE L2 -13 3259 3134 366 245 136 32 chr10 7815199 7815354 -132501411 - L1ME4a LINE L1 -57 6064 5894 1422 103 0 19 chr10 7815420 7815633 -132501132 - L1MA2 LINE L1 0 6304 6096 252 59 0 0 chr10 7816525 7816559 -132500206 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr10 7816559 7816583 -132500182 + (GA)n Simple_repeat Simple_repeat 1 24 0 1624 236 6 17 chr10 7816583 7816943 -132499822 - MLT2D LTR ERVL -57 357 2 1319 175 0 0 chr10 7817725 7817948 -132498817 - AluJb SINE Alu -18 294 72 1486 165 0 0 chr10 7817957 7818199 -132498566 - AluJb SINE Alu -52 260 19 277 157 0 0 chr10 7818308 7818384 -132498381 + Alu SINE Alu 247 322 0 642 200 74 0 chr10 7818616 7818751 -132498014 + L1ME3A LINE L1 6011 6155 -15 1060 90 0 0 chr10 7818811 7818944 -132497821 - FLAM_C SINE Alu 0 133 1 2067 102 7 7 chr10 7818953 7819256 -132497509 - AluSg SINE Alu -7 303 1 379 209 100 0 chr10 7819544 7819654 -132497111 - L1MB7 LINE L1 0 6184 6064 3400 112 23 6 chr10 7819702 7820222 -132496543 + L1MA3 LINE L1 5777 6305 0 1946 141 0 3 chr10 7820411 7820716 -132496049 - AluSx SINE Alu -8 304 1 670 222 250 28 chr10 7821027 7821239 -132495526 - MIR SINE MIR 0 262 4 2349 78 7 3 chr10 7821378 7821687 -132495078 - AluSx SINE Alu -2 310 1 245 339 51 8 chr10 7821779 7821897 -132494868 - L2 LINE L2 -4 3309 3187 186 71 0 0 chr10 7822908 7822936 -132493829 + (A)n Simple_repeat Simple_repeat 1 28 0 239 308 105 119 chr10 7823382 7823752 -132493013 + L2 LINE L2 2908 3272 0 2131 110 3 0 chr10 7823912 7824212 -132492553 - AluSx SINE Alu -11 301 1 573 225 38 127 chr10 7824533 7824800 -132491965 + MIR SINE MIR 20 262 0 292 205 121 12 chr10 7825133 7825216 -132491549 + MER3 DNA MER1_type 118 209 0 530 329 26 9 chr10 7825225 7825453 -132491312 - L1ME LINE L1 -345 5776 5545 21 36 0 0 chr10 7825527 7825555 -132491210 + AT_rich Low_complexity Low_complexity 1 28 0 432 280 72 28 chr10 7825714 7825910 -132490855 + L1M4 LINE L1 5221 5420 -748 266 280 224 32 chr10 7826200 7826325 -132490440 - MIR SINE MIR -74 188 40 279 79 0 0 chr10 7827382 7827420 -132489345 + (A)n Simple_repeat Simple_repeat 1 38 0 529 333 45 10 chr10 7828214 7828412 -132488353 - MIR SINE MIR -17 245 41 1915 133 0 10 chr10 7828886 7829188 -132487577 + AluJo SINE Alu 1 299 -13 272 203 34 0 chr10 7829577 7829636 -132487129 - MER58 DNA MER1_type -5 2415 2355 2147 100 3 3 chr10 7829636 7829937 -132486828 - AluSq SINE Alu -12 301 1 854 155 8 0 chr10 7829975 7830104 -132486661 - FLAM_C SINE Alu -3 130 1 24 67 0 0 chr10 7831000 7831045 -132485720 + AT_rich Low_complexity Low_complexity 1 45 0 1794 114 4 14 chr10 7831172 7831452 -132485313 - AluSx SINE Alu 0 312 36 206 296 151 45 chr10 7831452 7831631 -132485134 + L2 LINE L2 2068 2265 -1049 648 70 0 0 chr10 7831829 7831915 -132484850 + (TA)n Simple_repeat Simple_repeat 2 87 0 240 240 0 0 chr10 7832728 7832778 -132483987 - L2 LINE L2 0 3313 3264 2217 88 0 7 chr10 7833028 7833336 -132483429 + AluSc SINE Alu 1 306 -3 212 130 0 43 chr10 7834938 7834971 -132481794 + (TC)n Simple_repeat Simple_repeat 2 34 -11 1516 181 0 27 chr10 7834971 7835264 -132481501 - AluJb SINE Alu -27 285 1 212 130 0 43 chr10 7835264 7835276 -132481489 + (TC)n Simple_repeat Simple_repeat 34 45 0 360 309 18 0 chr10 7836174 7836284 -132480481 + L1MEd LINE L1 647 758 -5447 243 267 76 10 chr10 7836313 7836464 -132480301 + L1MEd LINE L1 1586 1912 -4304 1534 108 31 9 chr10 7836624 7836847 -132479918 - MER30 DNA MER1_type 0 230 3 2150 101 3 13 chr10 7837220 7837527 -132479238 + AluSq SINE Alu 1 304 -9 2036 115 3 0 chr10 7838800 7839096 -132477669 + AluSx SINE Alu 1 297 -15 858 209 78 57 chr10 7839754 7840175 -132476590 - L1MC5 LINE L1 -54 7907 7478 1531 171 60 17 chr10 7840224 7840523 -132476242 - AluJo SINE Alu 0 312 1 260 330 157 30 chr10 7840923 7841153 -132475612 + L3b LINE CR1 1249 1507 -76 558 308 122 9 chr10 7841520 7841734 -132475031 + MIR SINE MIR 6 243 -19 1750 149 66 30 chr10 7841753 7842115 -132474650 - THE1C LTR MaLR 0 375 1 2011 79 25 11 chr10 7842149 7842429 -132474336 + AluSq SINE Alu 1 284 -29 858 307 39 17 chr10 7842501 7842856 -132473909 + L1ME3 LINE L1 5795 6157 -5 294 284 94 0 chr10 7842993 7843120 -132473645 + L3 LINE CR1 1284 1422 -155 909 186 12 0 chr10 7843184 7843345 -132473420 + MER5A DNA MER1_type 2 164 -25 394 345 54 7 chr10 7844574 7844722 -132472043 + MIR SINE MIR 102 256 -6 2432 63 0 0 chr10 7845776 7846079 -132470686 + AluY SINE Alu 1 303 -8 2181 94 3 0 chr10 7846480 7846778 -132469987 + AluSp SINE Alu 1 299 -14 1596 114 121 11 chr10 7846790 7847054 -132469711 + AluSg1 SINE Alu 1 293 -16 281 206 0 22 chr10 7847073 7847165 -132469600 + L1MC4 LINE L1 6614 6703 -1339 1785 187 15 75 chr10 7847389 7847738 -132469027 + L1MB2 LINE L1 5779 6105 -66 2010 142 3 0 chr10 7847738 7848051 -132468714 + AluSx SINE Alu 1 314 0 1785 187 15 75 chr10 7848051 7848108 -132468657 + L1MB2 LINE L1 6105 6164 -7 837 186 132 0 chr10 7848884 7849051 -132467714 + MER53 DNA DNA 1 189 0 197 338 0 15 chr10 7849249 7849317 -132467448 - L2 LINE L2 -5 3267 3201 1428 45 6 0 chr10 7849391 7849570 -132467195 + L1PA8 LINE L1 5993 6172 0 180 0 0 0 chr10 7849584 7849604 -132467161 + (A)n Simple_repeat Simple_repeat 1 20 0 1878 163 9 34 chr10 7850045 7850081 -132466684 - L1MB5 LINE L1 -6 6168 6133 2396 90 0 10 chr10 7850081 7850393 -132466372 - AluSg SINE Alu -1 309 1 1878 163 9 34 chr10 7850393 7850705 -132466060 - L1MB5 LINE L1 -41 6133 5829 1066 200 19 0 chr10 7851618 7851828 -132464937 - L1MB5 LINE L1 -323 5851 5638 289 197 28 0 chr10 7852148 7852219 -132464546 - L1MB7 LINE L1 0 6184 6112 1657 176 59 7 chr10 7852380 7852794 -132463971 - L1MB5 LINE L1 -577 5603 5164 529 235 35 35 chr10 7853116 7853286 -132463479 - MER5B DNA MER1_type -8 170 1 2068 129 0 39 chr10 7853782 7854091 -132462674 - AluSx SINE Alu -15 297 1 202 308 0 0 chr10 7854177 7854242 -132462523 - MER5B DNA MER1_type -1 177 113 922 251 26 17 chr10 7854242 7854473 -132462292 + L1MB8 LINE L1 5945 6177 -1 451 277 29 78 chr10 7855508 7855750 -132461015 + MIR SINE MIR 6 235 -27 2727 45 0 0 chr10 7855800 7856111 -132460654 + AluY SINE Alu 1 311 0 741 149 75 15 chr10 7856946 7857080 -132459685 - FLAM_C SINE Alu 0 143 2 219 310 58 11 chr10 7857102 7857189 -132459576 - L2 LINE L2 -15 3257 3167 290 282 73 29 chr10 7858538 7858715 -132458050 - L1ME LINE L1 -339 5782 5599 26 0 0 0 chr10 7858737 7858763 -132458002 + AT_rich Low_complexity Low_complexity 1 26 0 2346 65 17 0 chr10 7858764 7859056 -132457709 + AluSg SINE Alu 1 297 -13 545 258 128 16 chr10 7860312 7860734 -132456031 + HAL1 LINE L1 1304 1809 -698 499 264 103 0 chr10 7860767 7860922 -132455843 + HsTC2 DNA Tc2 4 174 -1724 2085 197 64 34 chr10 7861088 7861556 -132455209 - LTR65 LTR ERV1 -20 649 168 207 0 0 0 chr10 7862141 7862164 -132454601 + (A)n Simple_repeat Simple_repeat 1 23 0 1905 151 3 44 chr10 7862173 7862490 -132454275 + AluJo SINE Alu 1 304 -8 207 204 0 0 chr10 7863525 7863569 -132453196 + GA-rich Low_complexity Low_complexity 1 44 0 710 141 8 0 chr10 7863596 7863724 -132453041 + GA-rich Low_complexity Low_complexity 4 132 0 180 125 0 0 chr10 7863742 7863774 -132452991 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1269 183 23 108 chr10 7864907 7865317 -132451448 + MLT1A2 LTR MaLR 1 374 0 255 348 90 7 chr10 7865348 7865503 -132451262 - MIR SINE MIR -94 168 1 1994 145 10 0 chr10 7865950 7866239 -132450526 + AluSx SINE Alu 1 292 -20 515 105 0 84 chr10 7866239 7866430 -132450335 + (TA)n Simple_repeat Simple_repeat 2 176 0 413 87 43 71 chr10 7866531 7866715 -132450050 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 * 690 73 0 78 chr10 7866673 7866864 -132449901 + (TA)n Simple_repeat Simple_repeat 2 177 0 888 173 52 0 chr10 7867233 7867406 -132449359 + MER5A DNA MER1_type 2 183 -6 578 205 7 66 chr10 7868383 7868580 -132448185 - MLT1G1 LTR MaLR 0 567 418 758 200 190 5 chr10 7868720 7868920 -132447845 - MLT1G1 LTR MaLR -357 238 2 311 177 0 64 chr10 7868924 7869015 -132447750 - L1P4 LINE L1 -329 5839 5753 618 120 22 11 chr10 7869123 7869215 -132447550 + MER58A DNA MER1_type 42 134 0 875 237 69 0 chr10 7869235 7869480 -132447285 + MLT1H1 LTR MaLR 294 555 0 264 179 0 0 chr10 7869480 7869518 -132447247 + Charlie8 DNA MER1_type 1378 1415 -1002 2174 87 30 33 chr10 7869853 7870152 -132446613 + AluY SINE Alu 1 298 -13 525 154 34 34 chr10 7871049 7871224 -132445541 + CT-rich Low_complexity Low_complexity 3 177 0 492 62 0 0 chr10 7871388 7871452 -132445313 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 185 267 0 50 chr10 7872202 7872262 -132444503 - MIR3 SINE MIR -24 184 128 2259 111 3 3 chr10 7872345 7872643 -132444122 + AluSq SINE Alu 1 298 -15 1797 224 60 47 chr10 7872992 7873193 -132443572 + MER74B LTR ERVL 56 253 -369 1892 110 3 81 chr10 7873193 7873533 -132443232 + AluSx SINE Alu 1 316 0 1797 224 60 47 chr10 7873533 7873880 -132442885 + MER74B LTR ERVL 253 612 -10 245 284 7 54 chr10 7874706 7874854 -132441911 + L1ME4a LINE L1 5258 5398 -893 345 268 92 1 chr10 7874890 7875040 -132441725 + L1ME4a LINE L1 5386 5549 -613 2153 118 0 3 chr10 7875111 7875398 -132441367 - AluSx SINE Alu -25 287 2 482 218 81 24 chr10 7875783 7875907 -132440858 + MIR SINE MIR 12 142 -120 2167 106 0 7 chr10 7875937 7876219 -132440546 + AluSq SINE Alu 1 280 -33 1887 231 67 8 chr10 7876389 7876879 -132439886 + LTR40a LTR ERVL 1 519 0 22 0 0 0 chr10 7877021 7877043 -132439722 + AT_rich Low_complexity Low_complexity 1 22 0 1805 170 0 3 chr10 7878291 7878580 -132438185 - AluJo SINE Alu -24 288 1 22 56 0 0 chr10 7878585 7878621 -132438144 + AT_rich Low_complexity Low_complexity 1 36 0 267 244 13 13 chr10 7878709 7878787 -132437978 + L1ME4a LINE L1 5531 5608 -513 2425 76 7 0 chr10 7878805 7879106 -132437659 - AluSg SINE Alu -7 303 1 2234 92 3 20 chr10 7879106 7879411 -132437354 - AluSc SINE Alu -9 300 1 502 101 0 0 chr10 7879413 7879482 -132437283 - L1ME LINE L1 -565 5601 5533 903 280 92 30 chr10 7879741 7880109 -132436656 + MLT1I LTR MaLR 17 407 -2 291 254 0 0 chr10 7880109 7880180 -132436585 + L1ME4a LINE L1 5856 5926 -195 3075 118 53 45 chr10 7880501 7881107 -132435658 - MER4B LTR ERV1 0 779 1 2099 137 0 7 chr10 7881159 7881458 -132435307 + AluSx SINE Alu 1 297 -15 28 0 0 0 chr10 7881465 7881493 -132435272 + AT_rich Low_complexity Low_complexity 1 28 0 1728 174 30 21 chr10 7882972 7883306 -132433459 + MER1B DNA MER1_type 1 337 0 1893 142 0 23 chr10 7883766 7884068 -132432697 - AluJb SINE Alu -17 295 1 2209 101 11 0 chr10 7884146 7884432 -132432333 + AluSx SINE Alu 5 293 -19 267 237 172 0 chr10 7885390 7885483 -132431282 - MIR SINE MIR -6 256 148 256 204 74 0 chr10 7885503 7885557 -132431208 + MER69 DNA AcHobo 10 67 -2459 916 179 11 16 chr10 7885565 7885749 -132431016 + MER69 DNA AcHobo 2344 2526 0 617 234 0 0 chr10 7885749 7885886 -132430879 - MIR SINE MIR -92 170 34 2094 141 0 0 chr10 7886184 7886482 -132430283 + AluSx SINE Alu 1 298 -14 308 287 193 7 chr10 7886484 7886634 -132430131 + MER5A DNA MER1_type 12 189 0 429 237 192 5 chr10 7886881 7887079 -132429686 - MIR SINE MIR -17 245 11 439 272 130 24 chr10 7887461 7887678 -132429087 - MIR SINE MIR -28 234 1 22 70 0 0 chr10 7888800 7888843 -132427922 + GC_rich Low_complexity Low_complexity 1 43 0 194 351 0 0 chr10 7891184 7891241 -132425524 - L3b LINE CR1 -8 1575 1519 290 360 40 0 chr10 7892115 7892265 -132424500 + L2 LINE L2 3116 3271 -1 1496 156 113 11 chr10 7892787 7893069 -132423696 - AluSx SINE Alu -1 311 1 639 221 16 0 chr10 7893300 7893427 -132423338 + FLAM_A SINE Alu 10 138 -4 525 183 12 37 chr10 7893427 7893591 -132423174 + GA-rich Low_complexity Low_complexity 1 160 0 234 89 0 44 chr10 7893700 7893745 -132423020 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 207 147 0 59 chr10 7893743 7893811 -132422954 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 * 545 299 19 38 chr10 7894097 7894308 -132422457 + L1MC4a LINE L1 5576 5782 -2026 552 227 89 35 chr10 7894565 7894768 -132421997 + L1MC4a LINE L1 5787 6000 -1808 336 48 0 0 chr10 7894966 7895008 -132421757 + (GGA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 7895148 7895187 -132421578 + (CA)n Simple_repeat Simple_repeat 1 39 0 2067 96 7 31 chr10 7895445 7895774 -132420991 - AluSc SINE Alu 0 323 2 2425 83 3 0 chr10 7896842 7897142 -132419623 - AluY SINE Alu -10 301 1 926 203 56 107 chr10 7897760 7898214 -132418551 + MLT1A2 LTR MaLR 1 370 -4 4190 185 22 83 chr10 7898461 7898653 -132418112 + L1MD2 LINE L1 5093 5295 -1064 2285 93 0 17 chr10 7898653 7898953 -132417812 + AluSq SINE Alu 1 295 -18 4190 185 22 83 chr10 7898953 7899400 -132417365 + L1MD2 LINE L1 5295 5767 -592 1758 166 14 0 chr10 7899400 7899684 -132417081 - AluJo SINE Alu -19 293 6 4190 185 22 83 chr10 7899684 7899895 -132416870 + L1MD2 LINE L1 5767 5989 -370 2047 119 0 58 chr10 7899895 7900223 -132416542 + AluSg SINE Alu 2 310 0 4190 185 22 83 chr10 7900223 7900484 -132416281 + L1MD2 LINE L1 5989 6152 -207 339 25 0 0 chr10 7900484 7900524 -132416241 + (CA)n Simple_repeat Simple_repeat 1 40 0 4190 185 22 83 chr10 7900524 7900719 -132416046 + L1MD2 LINE L1 6152 6357 -2 1225 163 37 20 chr10 7900838 7901083 -132415682 - MLT2D LTR ERVL -165 249 1 1520 97 5 7 chr10 7901155 7901509 -132415256 - MSTA LTR MaLR 0 428 1 458 164 0 0 chr10 7901671 7901744 -132415021 + L1MB5 LINE L1 6069 6141 -33 1985 112 14 20 chr10 7901749 7902044 -132414721 + AluSx SINE Alu 3 295 -17 24 32 0 0 chr10 7902050 7902081 -132414684 + AT_rich Low_complexity Low_complexity 1 31 0 826 204 42 11 chr10 7902647 7902838 -132413927 - MIR SINE MIR 0 262 66 1350 195 101 0 chr10 7903022 7903471 -132413294 + AluJo SINE Alu 5 480 0 752 144 6 24 chr10 7903487 7903654 -132413111 + GA-rich Low_complexity Low_complexity 1 164 0 507 28 0 28 chr10 7903756 7903828 -132412937 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 8684 179 41 14 chr10 7903833 7904860 -132411905 + L1PA16 LINE L1 3343 4340 -1826 237 33 0 0 chr10 7904860 7904890 -132411875 + (CA)n Simple_repeat Simple_repeat 1 30 0 8684 179 41 14 chr10 7904890 7906614 -132410151 + L1PA16 LINE L1 4340 6165 -1 1841 94 102 0 chr10 7906774 7907053 -132409712 + AluSx SINE Alu 1 305 0 331 277 34 20 chr10 7907270 7907418 -132409347 + L1MC5 LINE L1 7636 7785 -176 1633 175 11 3 chr10 7907420 7907705 -132409060 + AluJo SINE Alu 1 287 -25 29 28 0 0 chr10 7907706 7907742 -132409023 + AT_rich Low_complexity Low_complexity 1 36 0 195 358 51 12 chr10 7907839 7908017 -132408748 + L2 LINE L2 2852 3037 -276 856 244 105 4 chr10 7908291 7908529 -132408236 - MIR SINE MIR 0 262 1 1584 92 30 0 chr10 7909452 7909794 -132406971 + L1P4 LINE L1 5141 5489 -685 315 141 0 2 chr10 7909796 7910041 -132406724 + AluSx SINE Alu 1 298 -4 5780 71 0 4 chr10 7910041 7910743 -132406022 + L1PA11 LINE L1 5476 6174 0 1180 254 76 25 chr10 7910949 7911330 -132405435 + MLT1I LTR MaLR 13 409 0 1352 245 82 18 chr10 7911618 7912066 -132404699 - MER20B DNA MER1_type 0 783 307 1527 226 74 6 chr10 7912066 7912206 -132404559 + MLT1A2 LTR MaLR 1 130 -244 2178 97 0 3 chr10 7912206 7912495 -132404270 + AluY SINE Alu 23 310 -1 1527 226 74 6 chr10 7912495 7912690 -132404075 + MLT1A2 LTR MaLR 130 359 -15 680 273 59 52 chr10 7912701 7912810 -132403955 - MER20B DNA MER1_type -472 311 204 2401 111 47 39 chr10 7912810 7913171 -132403594 - THE1B LTR MaLR 0 364 1 12139 104 10 1 chr10 7913171 7914737 -132402028 - THE1B-int LTR MaLR 0 1580 1 2273 123 53 34 chr10 7914737 7915094 -132401671 - THE1B LTR MaLR 0 364 1 680 273 59 52 chr10 7915094 7915268 -132401497 - MER20B DNA MER1_type -578 205 24 3763 206 76 52 chr10 7915392 7915758 -132401007 - Tigger6a DNA MER2_type -519 1078 723 378 0 0 0 chr10 7915758 7915800 -132400965 + (TG)n Simple_repeat Simple_repeat 2 43 0 3763 206 76 52 chr10 7915800 7916482 -132400283 - Tigger6a DNA MER2_type -874 723 4 2510 78 0 0 chr10 7916664 7916970 -132399795 - AluY SINE Alu -5 306 1 2258 84 3 0 chr10 7917415 7917701 -132399064 + AluSp SINE Alu 2 288 -25 1308 154 70 40 chr10 7917722 7917994 -132398771 - AluJo SINE Alu -30 282 3 273 260 30 20 chr10 7918930 7919030 -132397735 - L2 LINE L2 -1 3312 3212 52 64 0 0 chr10 7919554 7919648 -132397117 + AT_rich Low_complexity Low_complexity 1 94 0 2097 121 0 23 chr10 7919669 7919976 -132396789 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 7920064 7920085 -132396680 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 7920184 7920207 -132396558 + AT_rich Low_complexity Low_complexity 1 23 0 255 295 0 26 chr10 7920402 7920480 -132396285 - L2 LINE L2 -1 3312 3237 1735 172 0 10 chr10 7920718 7921009 -132395756 - AluJb SINE Alu -24 288 1 229 148 19 37 chr10 7921184 7921238 -132395527 + C-rich Low_complexity Low_complexity 4 56 0 244 341 161 0 chr10 7921682 7921887 -132394878 - L2 LINE L2 -480 2834 2597 2410 72 7 3 chr10 7921990 7922294 -132394471 + AluSq SINE Alu 1 305 -8 2133 103 3 0 chr10 7923273 7923563 -132393202 - AluSx SINE Alu -21 291 1 1565 163 48 38 chr10 7923568 7923857 -132392908 - AluJo SINE Alu -10 292 1 488 121 0 0 chr10 7924569 7924635 -132392130 - AluS SINE Alu -246 67 2 275 149 37 0 chr10 7925153 7925260 -132391505 + (TATAA)n Simple_repeat Simple_repeat 4 114 0 479 88 67 47 chr10 7925281 7925954 -132390811 + (TATAA)n Simple_repeat Simple_repeat 1 686 0 30 45 0 0 chr10 7925964 7926008 -132390757 + AT_rich Low_complexity Low_complexity 1 44 0 258 227 57 11 chr10 7926018 7926106 -132390659 + L1MC4 LINE L1 6615 6706 -1336 268 330 27 9 chr10 7926170 7926282 -132390483 + Charlie2 DNA MER1_type 18 131 -2651 2169 216 64 82 chr10 7926396 7927092 -132389673 + Charlie2 DNA MER1_type 1869 2576 -286 1626 203 7 3 chr10 7927092 7927382 -132389383 - AluJb SINE Alu -21 291 1 2169 216 64 82 chr10 7927382 7927493 -132389272 + Charlie2 DNA MER1_type 2576 2661 -201 2334 106 3 3 chr10 7927493 7927805 -132388960 + AluSx SINE Alu 1 312 0 2169 216 64 82 chr10 7927805 7927871 -132388894 + Charlie2 DNA MER1_type 2661 2727 -135 726 155 31 54 chr10 7927971 7928100 -132388665 - AluJo SINE Alu -100 212 87 352 267 10 20 chr10 7928102 7928203 -132388562 + Charlie2 DNA MER1_type 2761 2860 -2 2062 126 3 0 chr10 7928766 7929052 -132387713 - AluJb SINE Alu -25 287 1 2065 148 32 42 chr10 7929063 7929441 -132387324 - L1MC1 LINE L1 0 6333 5960 200 284 34 45 chr10 7929663 7929751 -132387014 - MER5B DNA MER1_type -67 111 25 615 122 0 0 chr10 7930071 7930153 -132386612 + AluY SINE Alu 2 83 -227 899 247 131 0 chr10 7930172 7930439 -132386326 + L1ME3 LINE L1 5830 6131 -31 2346 84 3 3 chr10 7930439 7930747 -132386018 + AluY SINE Alu 1 308 -3 1948 123 3 0 chr10 7931714 7931998 -132384767 - AluSg SINE Alu -4 306 22 1815 112 8 0 chr10 7932248 7932498 -132384267 + AluSx SINE Alu 1 252 -60 293 141 0 4 chr10 7932546 7932599 -132384166 + Alu SINE Alu 251 291 -11 754 186 16 0 chr10 7932801 7932925 -132383840 - FLAM_C SINE Alu -16 127 2 772 316 35 23 chr10 7933581 7933923 -132382842 + L1MC4a LINE L1 5567 5912 -1896 228 244 0 0 chr10 7933956 7934001 -132382764 - L1MC4 LINE L1 -1340 6702 6658 1375 99 6 0 chr10 7934136 7934317 -132382448 - AluSg/x SINE Alu -14 296 115 233 224 0 35 chr10 7934887 7934945 -132381820 + CT-rich Low_complexity Low_complexity 2 57 0 2453 90 3 0 chr10 7935387 7935698 -132381067 + AluSp SINE Alu 1 312 -1 989 244 9 18 chr10 7935772 7935993 -132380772 - MER20 DNA MER1_type 0 219 1 550 243 97 138 chr10 7936034 7936549 -132380216 - L2 LINE L2 0 3313 2820 * 3132 288 109 6 chr10 7936539 7937825 -132378940 - L2 LINE L2 -706 2608 1191 1819 148 0 48 chr10 7939479 7939789 -132376976 - AluJb SINE Alu -12 300 6 2009 127 27 7 chr10 7940131 7940431 -132376334 + AluJb SINE Alu 2 307 -5 1659 169 3 40 chr10 7941635 7941936 -132374829 + AluJo SINE Alu 2 291 -21 1935 92 4 15 chr10 7941953 7942214 -132374551 + AluSq SINE Alu 1 258 -55 375 113 0 0 chr10 7942229 7942291 -132374474 + (TA)n Simple_repeat Simple_repeat 2 63 0 2298 114 0 13 chr10 7942559 7942875 -132373890 - AluSx SINE Alu 0 312 1 2004 136 17 0 chr10 7943670 7943964 -132372801 - AluJo SINE Alu -13 299 1 844 183 69 137 chr10 7944265 7944571 -132372194 - MLT2D LTR ERVL 0 414 130 1225 106 0 0 chr10 7944571 7944732 -132372033 - AluSg/x SINE Alu -15 295 135 779 178 0 34 chr10 7945461 7945607 -132371158 + FLAM_C SINE Alu 2 142 -1 1893 5 0 0 chr10 7945897 7946101 -132370664 + AluYb8 SINE Alu 115 318 0 4695 160 28 20 chr10 7946151 7947059 -132369706 + L1MC1 LINE L1 5188 6103 -230 195 288 50 12 chr10 7947551 7947631 -132369134 - MIR SINE MIR -12 250 168 1992 146 0 16 chr10 7948077 7948385 -132368380 + AluJo SINE Alu 1 303 -9 2321 93 3 3 chr10 7948387 7948689 -132368076 + AluSc SINE Alu 6 307 -2 923 138 0 0 chr10 7948976 7949106 -132367659 + FLAM_C SINE Alu 1 130 -3 2934 144 35 38 chr10 7949111 7949185 -132367580 + L1MB7 LINE L1 5514 5587 -597 2934 166 16 14 chr10 7949185 7949700 -132367065 + L1MB7 LINE L1 5655 6172 -12 2934 144 35 38 chr10 7949700 7949723 -132367042 + L1MB7 LINE L1 5587 6172 -12 22 0 0 0 chr10 7950176 7950198 -132366567 + AT_rich Low_complexity Low_complexity 1 22 0 473 285 149 17 chr10 7950400 7950767 -132365998 + MLT1J2 LTR MaLR 1 476 -35 509 286 119 62 chr10 7950971 7951198 -132365567 + MIR SINE MIR 8 247 -15 2196 100 7 0 chr10 7951247 7951581 -132365184 + AluSx SINE Alu 1 336 0 255 125 0 0 chr10 7951615 7951655 -132365110 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2126 98 21 0 chr10 7952108 7952394 -132364371 - AluSx SINE Alu -15 297 6 393 278 70 27 chr10 7953561 7953748 -132363017 + L1ME4a LINE L1 5927 6121 0 1781 215 63 59 chr10 7954366 7954570 -132362195 + L1ME1 LINE L1 5569 5771 -395 2060 112 80 0 chr10 7954570 7954884 -132361881 + MER44D DNA MER2_type 1 609 0 1781 215 63 59 chr10 7954884 7955270 -132361495 + L1ME1 LINE L1 5771 6161 -5 1819 116 113 72 chr10 7955548 7955760 -132361005 + MER46B DNA MER2_type 1 109 -2622 2033 151 3 0 chr10 7955760 7956059 -132360706 + AluSx SINE Alu 11 310 -2 1819 116 113 72 chr10 7956059 7956192 -132360573 + MER46B DNA MER2_type 109 235 -1 2231 127 0 0 chr10 7957004 7957312 -132359453 + AluSx SINE Alu 1 308 -4 320 130 0 0 chr10 7957386 7957432 -132359333 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr10 7958042 7958071 -132358694 + AT_rich Low_complexity Low_complexity 1 29 0 2370 93 3 3 chr10 7958907 7959209 -132357556 + AluSp SINE Alu 1 302 -11 1135 183 14 10 chr10 7959212 7959420 -132357345 + AluJo SINE Alu 6 214 -98 285 116 0 55 chr10 7959422 7959482 -132357283 + FLAM SINE Alu 82 132 -1 35 92 0 0 chr10 7959539 7959637 -132357128 + AT_rich Low_complexity Low_complexity 1 98 0 2194 114 0 3 chr10 7960770 7961067 -132355698 + AluSg SINE Alu 1 296 -14 217 326 128 47 chr10 7961144 7961316 -132355449 + L2 LINE L2 2748 2933 -381 223 354 40 10 chr10 7961413 7961512 -132355253 + L2 LINE L2 3148 3249 -23 2144 107 0 29 chr10 7961603 7961913 -132354852 + AluSx SINE Alu 1 301 -11 1996 147 6 16 chr10 7962266 7962580 -132354185 + AluSx SINE Alu 1 311 -1 2252 117 3 0 chr10 7962768 7963075 -132353690 + AluSx SINE Alu 5 312 0 230 328 123 23 chr10 7963668 7963839 -132352926 + MIR SINE MIR 4 191 -71 2373 79 0 0 chr10 7963969 7964259 -132352506 - AluSx SINE Alu -22 290 1 516 318 100 35 chr10 7964804 7965115 -132351650 - L3 LINE CR1 -521 1056 726 2275 121 0 6 chr10 7965639 7965954 -132350811 + AluSq SINE Alu 1 313 0 1627 209 58 62 chr10 7966858 7967361 -132349404 + MLT1D LTR MaLR 5 505 0 1190 181 23 9 chr10 7968002 7968223 -132348542 + MER58A DNA MER1_type 1 224 0 914 121 0 50 chr10 7968568 7968708 -132348057 + FLAM_A SINE Alu 1 133 0 642 238 88 59 chr10 7969130 7969403 -132347362 + MLT1L LTR MaLR 2 282 -333 351 242 91 10 chr10 7969515 7969614 -132347151 + MLT1L LTR MaLR 500 606 -9 22 35 0 0 chr10 7969746 7969775 -132346990 + AT_rich Low_complexity Low_complexity 1 29 0 2355 90 0 10 chr10 7969975 7970276 -132346489 + AluSg SINE Alu 1 298 -12 1807 139 4 4 chr10 7970287 7970561 -132346204 + AluSx SINE Alu 1 274 -38 1726 86 0 9 chr10 7970562 7970784 -132345981 + AluSg/x SINE Alu 87 306 -6 1669 161 16 30 chr10 7970795 7971100 -132345665 + AluJo SINE Alu 1 301 -11 697 198 10 134 chr10 7971293 7971569 -132345196 + L1ME3 LINE L1 5930 6170 0 2216 92 0 23 chr10 7971643 7971946 -132344819 + AluSx SINE Alu 1 296 -16 384 227 42 8 chr10 7971946 7972056 -132344709 + L2 LINE L2 3194 3310 -3 212 339 102 8 chr10 7972294 7972421 -132344344 - MIR SINE MIR -116 146 8 2180 119 0 0 chr10 7972486 7972796 -132343969 + AluSg SINE Alu 1 310 0 2131 110 7 0 chr10 7973153 7973455 -132343310 + AluSx SINE Alu 1 304 0 1829 136 39 29 chr10 7973545 7973853 -132342912 - MER2 DNA MER2_type -34 311 1 2040 142 0 19 chr10 7974418 7974728 -132342037 - AluSq SINE Alu -9 304 1 1558 167 92 4 chr10 7975497 7975615 -132341150 + AluJb SINE Alu 1 107 -205 225 0 0 0 chr10 7975615 7975640 -132341125 + (CA)n Simple_repeat Simple_repeat 2 26 0 1558 167 92 4 chr10 7975640 7975802 -132340963 + AluJb SINE Alu 107 306 -6 2002 131 3 7 chr10 7975803 7976109 -132340656 + AluSq SINE Alu 2 306 -7 526 170 107 0 chr10 7976124 7976236 -132340529 + Charlie1 DNA MER1_type 2622 2745 -16 196 293 48 75 chr10 7976384 7976531 -132340234 - L3 LINE CR1 -957 620 478 804 160 0 0 chr10 7976959 7977078 -132339687 + FLAM_C SINE Alu 12 130 -13 2137 120 0 3 chr10 7977522 7977821 -132338944 + AluSx SINE Alu 1 298 -14 789 136 36 0 chr10 7977823 7977933 -132338832 - AluJo/FLAM SINE Alu -192 120 7 485 228 205 29 chr10 7977955 7978126 -132338639 - MIR SINE MIR -2 260 60 377 284 0 0 chr10 7978403 7978505 -132338260 + MIR3 SINE MIR 91 192 -16 1911 141 7 34 chr10 7978978 7979276 -132337489 + AluJb SINE Alu 1 290 -22 2431 74 7 7 chr10 7979284 7979594 -132337171 + AluY SINE Alu 1 310 -1 198 0 0 0 chr10 7980295 7980317 -132336448 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1859 155 13 23 chr10 7980333 7980636 -132336129 + AluSx SINE Alu 1 300 -12 2304 109 3 0 chr10 7980813 7981124 -132335641 - AluSx SINE Alu 0 312 1 1272 193 41 4 chr10 7981584 7981828 -132334937 + AluJb SINE Alu 1 253 -59 29 0 0 0 chr10 7982213 7982242 -132334523 + AT_rich Low_complexity Low_complexity 1 29 0 416 199 69 30 chr10 7982888 7983019 -132333746 + MIR SINE MIR 126 261 -1 2351 81 7 0 chr10 7983898 7984193 -132332572 + L1PA7 LINE L1 5858 6154 0 1397 163 68 44 chr10 7984541 7984835 -132331930 + AluJo SINE Alu 7 307 -5 463 290 20 132 chr10 7985598 7985946 -132330819 - L2 LINE L2 -35 3237 2929 21 0 0 0 chr10 7986041 7986062 -132330703 + AT_rich Low_complexity Low_complexity 1 21 0 2191 124 3 0 chr10 7986669 7986975 -132329790 - AluSq SINE Alu -5 308 2 203 235 20 0 chr10 7988348 7988399 -132328366 - L3 LINE CR1 -1 1576 1525 352 271 192 6 chr10 7988706 7988883 -132327882 - L3 LINE CR1 -48 1529 1320 457 246 39 68 chr10 7988918 7988970 -132327795 + L1MC5 LINE L1 7717 7769 -192 2518 51 3 0 chr10 7988970 7989263 -132327502 - AluY SINE Alu -17 294 1 457 246 39 68 chr10 7989263 7989417 -132327348 + L1MC5 LINE L1 7769 7917 -44 289 376 102 0 chr10 7989442 7989639 -132327126 - L3 LINE CR1 -310 1267 1051 3006 82 0 0 chr10 7990033 7990410 -132326355 - L1PA8 LINE L1 0 6172 5796 441 277 97 9 chr10 7990800 7990989 -132325776 - MER20B DNA MER1_type -8 211 6 1339 220 125 9 chr10 7991226 7991553 -132325212 - MLT1A1 LTR MaLR 0 365 1 2114 134 0 0 chr10 7991950 7992249 -132324516 + AluY SINE Alu 1 299 -12 1266 199 83 11 chr10 7992834 7993100 -132323665 - AluJo SINE Alu -27 285 1 2634 42 0 3 chr10 7993277 7993583 -132323182 - AluY SINE Alu -6 305 1 186 276 153 20 chr10 7993689 7993787 -132322978 - L2 LINE L2 0 3313 3203 305 220 34 0 chr10 7993960 7994019 -132322746 - MER2 DNA MER2_type 0 345 285 * 412 231 115 15 chr10 7994011 7994141 -132322624 - MER2 DNA MER2_type -96 143 1 2255 106 0 0 chr10 7994252 7994544 -132322221 + AluSc SINE Alu 1 292 -17 241 221 176 0 chr10 7994598 7994666 -132322099 - L2 LINE L2 -1 3312 3233 1224 210 52 21 chr10 7994849 7995139 -132321626 - AluSx SINE Alu -13 299 1 1575 133 18 0 chr10 7995165 7995390 -132321375 - AluSq SINE Alu -82 231 3 1667 172 3 10 chr10 7995566 7995862 -132320903 + AluSx SINE Alu 1 294 -18 2309 89 7 20 chr10 7996064 7996367 -132320398 - AluSq SINE Alu -14 299 1 1033 210 109 58 chr10 7997111 7997558 -132319207 - MLT1D LTR MaLR -5 462 1 1901 122 22 0 chr10 7997642 7997912 -132318853 - L1PA15 LINE L1 -3 6162 5887 466 250 21 0 chr10 7998370 7998466 -132318299 - MER91A DNA MER1_type -2 194 97 1373 152 0 17 chr10 7998675 7998906 -132317859 + AluJo SINE Alu 86 312 0 492 141 0 0 chr10 7998922 7999003 -132317762 + L1PB4 LINE L1 5874 5954 -200 796 235 7 0 chr10 7999115 7999264 -132317501 + L1PB4 LINE L1 6000 6149 -7 188 300 14 14 chr10 8001419 8001489 -132315276 + L2 LINE L2 2747 2816 -498 920 149 0 0 chr10 8001925 8002228 -132314537 + (GAGTG)n Simple_repeat Simple_repeat 1 303 0 233 224 0 35 chr10 8002760 8002818 -132313947 + CT-rich Low_complexity Low_complexity 2 57 0 2439 90 3 3 chr10 8003260 8003572 -132313193 + AluSp SINE Alu 1 312 -1 918 244 9 18 chr10 8003646 8003867 -132312898 - MER20 DNA MER1_type 0 219 1 408 245 99 140 chr10 8003908 8004423 -132312342 - L2 LINE L2 0 3313 2820 2761 289 104 5 chr10 8004462 8005699 -132311066 - L2 LINE L2 -764 2550 1191 1835 148 0 48 chr10 8007353 8007663 -132309102 - AluJb SINE Alu -12 300 6 2159 106 3 3 chr10 8008005 8008289 -132308476 + AluSq SINE Alu 2 285 -28 524 141 113 42 chr10 8008304 8008446 -132308319 + Charlie1 DNA MER1_type 2604 2755 -6 423 241 25 137 chr10 8008527 8008629 -132308136 - MIR SINE MIR -38 224 163 2006 115 14 14 chr10 8008629 8008924 -132307841 - AluSg SINE Alu -15 295 1 423 241 25 137 chr10 8008924 8009062 -132307703 - MIR SINE MIR -99 163 11 312 134 152 27 chr10 8010278 8010390 -132306375 + MER113 DNA MER1_type? 123 248 -273 1820 160 7 17 chr10 8010530 8010830 -132305935 + AluJo SINE Alu 1 297 -15 512 237 100 73 chr10 8010839 8011197 -132305568 + L1MC4 LINE L1 7083 7458 -584 1864 163 3 10 chr10 8011197 8011498 -132305267 + AluJb SINE Alu 1 299 -13 512 237 100 73 chr10 8011498 8011537 -132305228 + L1MC4 LINE L1 7458 7494 -548 1998 124 3 65 chr10 8011740 8012063 -132304702 + AluSx SINE Alu 1 303 -9 1410 154 0 0 chr10 8012148 8012368 -132304397 + L1MC1 LINE L1 6013 6232 -101 238 257 34 40 chr10 8012476 8012624 -132304141 + L1MC5 LINE L1 7631 7777 -184 1454 197 47 63 chr10 8012673 8013053 -132303712 + MLT1A2 LTR MaLR 1 374 0 549 252 28 69 chr10 8013351 8013569 -132303196 - MIR SINE MIR -53 209 1 217 239 0 0 chr10 8013569 8013613 -132303152 + L2 LINE L2 3266 3309 -4 516 254 73 6 chr10 8016938 8017115 -132299650 + MIR SINE MIR 33 221 -41 2396 91 0 0 chr10 8017249 8017545 -132299220 + AluSc SINE Alu 1 296 -13 553 195 0 49 chr10 8018512 8018635 -132298130 + AluJb SINE Alu 181 297 -15 3557 240 168 30 chr10 8018635 8019342 -132297423 - L1MC2 LINE L1 -216 6128 5520 2311 87 3 7 chr10 8019342 8019641 -132297124 - AluSg SINE Alu -12 298 1 3557 240 168 30 chr10 8019641 8021036 -132295729 - L1MC2 LINE L1 -824 5520 3701 27 29 0 0 chr10 8021361 8021395 -132295370 + AT_rich Low_complexity Low_complexity 1 34 0 2583 57 0 0 chr10 8022811 8023112 -132293653 - AluY SINE Alu -10 301 1 532 227 37 114 chr10 8023465 8023738 -132293027 - MIR SINE MIR -2 260 9 2281 103 0 22 chr10 8024450 8024633 -132292132 - AluSx SINE Alu 0 312 137 2120 86 41 7 chr10 8024633 8024924 -132291841 - AluY SINE Alu -10 301 1 2281 103 0 22 chr10 8024924 8025059 -132291706 - AluSx SINE Alu -175 137 1 2190 80 7 0 chr10 8026435 8026710 -132290055 - AluY SINE Alu -21 290 14 2378 101 0 0 chr10 8026715 8027022 -132289743 - AluSx SINE Alu -5 307 1 337 242 124 25 chr10 8027413 8027574 -132289191 + MER104 DNA Tc2 4 180 0 1742 134 180 0 chr10 8027790 8028096 -132288669 - MER46B DNA MER2_type 0 236 1 789 157 109 58 chr10 8029522 8029795 -132286970 + MER2 DNA MER2_type 2 320 -25 340 214 111 56 chr10 8030175 8030301 -132286464 - L2 LINE L2 -9 3304 3172 453 225 217 0 chr10 8030334 8030463 -132286302 + MER58C DNA MER1_type 59 215 0 319 323 90 62 chr10 8030542 8030997 -132285768 + L2 LINE L2 2804 3271 -1 264 194 56 14 chr10 8031353 8031425 -132285340 + MIR SINE MIR 77 151 -111 2549 69 0 0 chr10 8031689 8031994 -132284771 + AluY SINE Alu 1 305 -6 1737 145 4 0 chr10 8032025 8032273 -132284492 + AluJo SINE Alu 1 249 -63 2393 68 10 7 chr10 8032593 8032889 -132283876 + AluSx SINE Alu 1 297 -15 899 159 173 30 chr10 8033495 8033748 -132283017 - Charlie1b DNA MER1_type -244 279 1 1847 123 55 44 chr10 8034277 8034570 -132282195 + AluSx SINE Alu 1 296 -16 22 94 0 0 chr10 8034794 8034858 -132281907 + AT_rich Low_complexity Low_complexity 1 64 0 195 42 0 0 chr10 8035157 8035181 -132281584 + (TG)n Simple_repeat Simple_repeat 1 24 0 814 125 33 0 chr10 8035214 8035334 -132281431 - FLAM_C SINE Alu -5 128 5 439 225 231 0 chr10 8035490 8035663 -132281102 + MIR SINE MIR 45 257 -5 249 251 124 115 chr10 8035706 8036029 -132280736 - L2 LINE L2 -20 3252 2927 1820 146 43 0 chr10 8036261 8036542 -132280223 - AluSx SINE Alu -19 293 1 486 200 20 0 chr10 8037108 8037208 -132279557 - L1MB7 LINE L1 -1 6183 6082 194 275 20 114 chr10 8037356 8037505 -132279260 - L2 LINE L2 -954 2360 2226 1499 170 4 0 chr10 8037578 8037813 -132278952 + AluJb SINE Alu 2 237 -75 1175 142 0 0 chr10 8037814 8037983 -132278782 + AluSg/x SINE Alu 141 309 -3 1572 267 37 12 chr10 8038009 8038160 -132278605 + L1MC4a LINE L1 6453 6599 -1209 2285 76 10 3 chr10 8038160 8038451 -132278314 + AluSx SINE Alu 2 294 -18 1572 267 37 12 chr10 8038451 8038782 -132277983 + L1MC4a LINE L1 6599 6947 -861 1966 107 55 4 chr10 8038804 8039098 -132277667 + AluSq SINE Alu 2 309 0 277 280 19 0 chr10 8039105 8039212 -132277553 + L1MC4 LINE L1 7689 7797 -245 1088 207 118 7 chr10 8039227 8039531 -132277234 + LTR16A LTR ERVL 16 353 -97 305 271 0 12 chr10 8039534 8039619 -132277146 + C-rich Low_complexity Low_complexity 4 87 0 304 227 94 70 chr10 8039628 8039756 -132277009 + LTR16A LTR ERVL 320 450 0 658 202 82 91 chr10 8039757 8040000 -132276765 + HERV16 LTR ERVL 2 242 -4754 1157 292 85 16 chr10 8040129 8041102 -132275663 + HERV16 LTR ERVL 1584 2670 -2326 1204 185 39 5 chr10 8041102 8041307 -132275458 + Tigger5 DNA MER2_type 1 212 -2111 271 146 0 0 chr10 8041320 8041361 -132275404 + MERVL LTR ERVL 4353 4393 -1092 798 358 26 18 chr10 8041408 8041624 -132275141 + MERVL LTR ERVL 4525 4738 -1026 1300 195 30 47 chr10 8041624 8041922 -132274843 - AluJo SINE Alu -15 297 5 798 358 26 18 chr10 8041922 8042161 -132274604 + MERVL LTR ERVL 4738 4984 -780 750 261 122 30 chr10 8042663 8042992 -132273773 + LTR16A LTR ERVL 92 450 0 737 239 32 24 chr10 8043004 8043251 -132273514 + L1MC4 LINE L1 7793 8041 -1 203 300 0 12 chr10 8043362 8043442 -132273323 - L2 LINE L2 -1326 1988 1910 234 0 0 0 chr10 8044044 8044070 -132272695 + (A)n Simple_repeat Simple_repeat 1 26 0 389 186 21 21 chr10 8044116 8044213 -132272552 + MER96B DNA MER1_type? 278 374 -43 204 195 0 0 chr10 8046548 8046589 -132270176 + L2 LINE L2 3273 3313 0 1971 151 0 0 chr10 8046694 8046986 -132269779 - AluJo SINE Alu -20 292 1 225 0 0 0 chr10 8047131 8047156 -132269609 + (CTAGG)n Simple_repeat Simple_repeat 2 26 0 257 315 56 0 chr10 8047560 8047649 -132269116 - L2 LINE L2 -9 3263 3170 934 190 0 6 chr10 8049158 8049321 -132267444 + AluJb SINE Alu 137 298 -14 382 236 22 0 chr10 8049389 8049478 -132267287 - L2 LINE L2 -4 3309 3219 1639 182 3 18 chr10 8049541 8049827 -132266938 + AluJo SINE Alu 1 282 -30 2342 91 7 0 chr10 8049827 8050124 -132266641 - AluSg SINE Alu -11 299 1 21 0 0 0 chr10 8050162 8050183 -132266582 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 8050433 8050462 -132266303 + AT_rich Low_complexity Low_complexity 1 29 0 3534 155 37 28 chr10 8051529 8052179 -132264586 - L1MB3 LINE L1 -14 6169 5514 206 32 32 0 chr10 8052629 8052660 -132264105 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 306 275 70 76 chr10 8053393 8053564 -132263201 + MIR SINE MIR 63 232 -30 1476 137 111 19 chr10 8053579 8053690 -132263075 + AluJo SINE Alu 1 100 -212 2512 68 3 0 chr10 8053690 8053999 -132262766 + AluY SINE Alu 1 310 -1 1476 137 111 19 chr10 8053999 8054158 -132262607 + AluJo SINE Alu 100 296 -16 1029 152 0 0 chr10 8054292 8054443 -132262322 + FAM SINE Alu 16 166 -19 2482 78 13 0 chr10 8054942 8055248 -132261517 + AluSx SINE Alu 1 310 -2 3939 176 14 12 chr10 8055357 8056117 -132260648 - L1MC3 LINE L1 -3 7782 7021 254 159 26 142 chr10 8056444 8056557 -132260208 - L1ME3A LINE L1 -106 6064 5965 929 159 28 0 chr10 8056665 8056847 -132259918 - AluSg/x SINE Alu -3 307 121 24 67 0 0 chr10 8057979 8058024 -132258741 + AT_rich Low_complexity Low_complexity 1 45 0 1644 128 84 0 chr10 8058201 8058452 -132258313 - AluSx SINE Alu -18 294 23 263 342 129 13 chr10 8058971 8059126 -132257639 + MIR SINE MIR 20 192 -70 1411 264 76 9 chr10 8060014 8060464 -132256301 - MLT1E2 LTR MaLR 0 626 147 967 258 42 31 chr10 8060608 8060965 -132255800 - HAL1 LINE L1 -904 1603 1243 1586 151 50 7 chr10 8060970 8061249 -132255516 - AluJo SINE Alu 0 312 22 257 123 38 54 chr10 8061349 8061405 -132255360 - AluJo SINE Alu -258 42 1 319 279 62 0 chr10 8061405 8061534 -132255231 - HAL1 LINE L1 -1265 1242 1106 444 314 85 44 chr10 8061534 8061694 -132255071 - MLT1L LTR MaLR 0 615 463 2464 82 3 0 chr10 8061694 8062000 -132254765 + AluSx SINE Alu 1 307 -5 444 314 85 44 chr10 8062000 8062158 -132254607 - MLT1L LTR MaLR -152 463 284 376 317 113 52 chr10 8062165 8062679 -132254086 - HAL1 LINE L1 -1505 1002 458 227 244 197 16 chr10 8063232 8063359 -132253406 + L1ME4a LINE L1 5892 6041 -80 23 0 0 0 chr10 8064096 8064119 -132252646 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 8064351 8064380 -132252385 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 8065047 8065069 -132251696 + AT_rich Low_complexity Low_complexity 1 22 0 376 212 46 129 chr10 8065245 8065486 -132251279 - L1MC4 LINE L1 -87 7955 7735 2163 100 4 0 chr10 8065499 8065778 -132250987 + AluSp SINE Alu 27 306 -7 758 290 122 12 chr10 8065832 8066260 -132250505 - L1MC4 LINE L1 -537 7505 7031 1422 194 15 7 chr10 8066286 8066559 -132250206 + AluJo SINE Alu 15 289 -23 1027 201 24 36 chr10 8066560 8066809 -132249956 - L1MC4 LINE L1 -1013 7029 6784 299 329 66 51 chr10 8067722 8067859 -132248906 + L2 LINE L2 3134 3272 0 1051 260 100 57 chr10 8068009 8068520 -132248245 + Charlie8 DNA MER1_type 12 544 -1873 2295 92 0 10 chr10 8068930 8069225 -132247540 + AluSg SINE Alu 1 292 -18 518 184 48 0 chr10 8069969 8070072 -132246693 - MER114 LTR ERV -95 553 446 281 130 0 0 chr10 8070230 8070276 -132246489 - FRAM/FAM SINE Alu -120 46 1 23 54 0 0 chr10 8070791 8070828 -132245937 + AT_rich Low_complexity Low_complexity 1 37 0 262 224 52 43 chr10 8070891 8071007 -132245758 - MER113 DNA MER1_type? -404 117 1 181 377 35 13 chr10 8071162 8071390 -132245375 - L2 LINE L2 -556 2758 2526 551 301 31 35 chr10 8071574 8071830 -132244935 - MER102b DNA MER1_type -3 338 84 224 267 93 13 chr10 8071836 8071911 -132244854 + MIR SINE MIR 159 239 -23 695 161 65 30 chr10 8072221 8072389 -132244376 - MER5A DNA MER1_type 0 189 16 631 258 60 0 chr10 8072531 8072698 -132244067 + MER5A DNA MER1_type 13 189 0 1254 218 107 3 chr10 8073252 8073550 -132243215 + MER2 DNA MER2_type 6 334 -11 2315 117 0 0 chr10 8073766 8074075 -132242690 - AluSx SINE Alu -3 309 1 344 290 15 70 chr10 8075002 8075202 -132241563 + Charlie8 DNA MER1_type 1 189 -2228 719 190 0 0 chr10 8075678 8075794 -132240971 - FLAM_C SINE Alu -17 116 1 1166 253 30 22 chr10 8076296 8076659 -132240106 - MLT1B LTR MaLR -7 383 18 984 247 74 54 chr10 8077086 8077667 -132239098 + L1MC5 LINE L1 7261 7774 -187 325 336 160 15 chr10 8077689 8077957 -132238808 + L2 LINE L2 2988 3294 -19 2524 71 0 0 chr10 8078327 8078635 -132238130 - AluSx SINE Alu -4 308 1 1822 226 95 74 chr10 8078635 8079204 -132237561 - L1MC5 LINE L1 -435 7526 6934 2282 93 0 0 chr10 8079204 8079495 -132237270 - AluSg SINE Alu -19 291 1 1822 226 95 74 chr10 8079495 8079725 -132237040 - L1MC5 LINE L1 -1027 6934 6710 36 0 0 0 chr10 8079731 8079767 -132236998 + AT_rich Low_complexity Low_complexity 1 36 0 2279 179 13 30 chr10 8079777 8080251 -132236514 - L1MA7 LINE L1 -26 6265 5800 998 134 5 80 chr10 8080255 8080387 -132236378 - L1MA3 LINE L1 0 6305 6191 2017 137 6 19 chr10 8080387 8080701 -132236064 - AluSx SINE Alu -2 310 1 998 134 5 80 chr10 8080701 8080769 -132235996 - L1MA3 LINE L1 -114 6191 6120 504 188 0 0 chr10 8080769 8080849 -132235916 + AluJ/FLAM SINE Alu 5 84 -228 393 162 0 0 chr10 8080849 8080917 -132235848 - L1MA3 LINE L1 -175 6130 6063 * 2889 143 54 6 chr10 8080897 8081412 -132235353 - L1MA7 LINE L1 -475 5816 5293 240 77 0 0 chr10 8081850 8081889 -132234876 - L1MA7 LINE L1 -991 5300 5262 * 1833 191 32 8 chr10 8081885 8082287 -132234478 - L1 LINE L1 -816 5330 4919 278 198 0 62 chr10 8082292 8082373 -132234392 - L1MC5 LINE L1 -1237 6724 6649 1634 108 18 0 chr10 8082969 8083191 -132233574 + MER30 DNA MER1_type 5 230 0 209 308 219 31 chr10 8083781 8084129 -132232636 + L2 LINE L2 1932 2213 -1101 2171 95 57 0 chr10 8084129 8084425 -132232340 - AluSp SINE Alu 0 313 1 209 308 219 31 chr10 8084425 8084650 -132232115 + L2 LINE L2 2213 2613 -701 1406 157 25 98 chr10 8084797 8084932 -132231833 + AluJb SINE Alu 1 144 -168 1964 127 0 0 chr10 8084932 8085200 -132231565 + AluSq SINE Alu 1 268 -45 1406 157 25 98 chr10 8085200 8085212 -132231553 + AluJb SINE Alu 144 155 -157 2135 139 0 0 chr10 8085212 8085514 -132231251 + AluSx SINE Alu 1 302 -10 1406 157 25 98 chr10 8085514 8085683 -132231082 + AluJb SINE Alu 155 295 -17 285 341 67 39 chr10 8085858 8086037 -132230728 - MIR SINE MIR -56 206 23 2174 128 0 7 chr10 8086206 8086533 -132230232 - AluSx SINE Alu 0 312 1 203 79 26 0 chr10 8086761 8086799 -132229966 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 214 273 0 80 chr10 8087342 8087430 -132229335 - MIR SINE MIR -157 105 25 2395 71 0 0 chr10 8088009 8088303 -132228462 - AluY SINE Alu -17 294 1 2470 80 0 3 chr10 8088688 8089002 -132227763 - AluSq SINE Alu 0 313 1 271 336 31 8 chr10 8089115 8089243 -132227522 - L2 LINE L2 -1 3271 3141 25 0 0 0 chr10 8089720 8089745 -132227020 + AT_rich Low_complexity Low_complexity 1 25 0 1638 190 48 0 chr10 8090016 8090311 -132226454 - AluJb SINE Alu -3 309 1 202 232 126 21 chr10 8090565 8090660 -132226105 + MIR SINE MIR 99 203 -59 1675 162 36 4 chr10 8090982 8091260 -132225505 - AluJo SINE Alu -25 287 1 2413 87 0 3 chr10 8092218 8092527 -132224238 - AluSc SINE Alu -1 308 1 633 265 94 32 chr10 8092658 8093051 -132223714 - L1ME LINE L1 -326 5836 5450 2393 69 7 0 chr10 8093804 8094107 -132222658 - AluY SINE Alu -6 305 1 3390 168 73 80 chr10 8094320 8095286 -132221479 + Looper DNA T2_type 1 960 -598 1772 179 3 3 chr10 8095306 8095597 -132221168 - AluJo SINE Alu -19 293 3 716 172 61 37 chr10 8095597 8095620 -132221145 + Looper DNA T2_type 1392 1413 -145 2021 122 3 16 chr10 8095620 8095923 -132220842 - AluSx SINE Alu -13 299 1 716 172 61 37 chr10 8095923 8096062 -132220703 + Looper DNA T2_type 1413 1558 0 671 251 96 35 chr10 8096925 8097124 -132219641 - MIR SINE MIR -21 241 31 1959 148 0 10 chr10 8097516 8097821 -132218944 - AluJb SINE Alu -10 302 1 2154 126 3 0 chr10 8098233 8098527 -132218238 + AluSx SINE Alu 1 295 -17 213 175 0 0 chr10 8098527 8098567 -132218198 + (TA)n Simple_repeat Simple_repeat 1 40 0 1249 263 51 47 chr10 8098750 8099336 -132217429 - L2 LINE L2 0 3313 2736 654 265 44 22 chr10 8099349 8099621 -132217144 - L1MC5 LINE L1 -31 7930 7653 1522 202 20 17 chr10 8099623 8099925 -132216840 - AluJo SINE Alu -9 303 1 917 153 0 0 chr10 8099944 8100081 -132216684 - FRAM SINE Alu -30 146 10 2162 200 50 79 chr10 8100089 8100889 -132215876 - L1MC5 LINE L1 -305 7656 6880 3152 213 91 61 chr10 8100898 8101927 -132214838 - MER63D DNA MER1_type 0 1061 2 1791 242 112 105 chr10 8102759 8103643 -132213122 + HAL1 LINE L1 1 877 -1630 787 135 0 15 chr10 8103643 8103776 -132212989 + FLAM_C SINE Alu 3 133 0 1791 242 112 105 chr10 8103776 8104044 -132212721 + HAL1 LINE L1 877 1165 -1342 2142 65 41 27 chr10 8104044 8104338 -132212427 + AluSx SINE Alu 1 298 -14 1791 242 112 105 chr10 8104338 8104416 -132212349 + HAL1 LINE L1 1165 1241 -1266 809 201 22 0 chr10 8104470 8104649 -132212116 + L1MC5 LINE L1 6694 6876 -1085 1775 235 37 8 chr10 8104663 8105148 -132211617 + MER63C DNA MER1_type 1 499 -431 222 282 0 39 chr10 8106504 8106582 -132210183 + MIR SINE MIR 180 254 -8 204 235 0 0 chr10 8106646 8106714 -132210051 + (TG)n Simple_repeat Simple_repeat 1 68 0 270 299 39 0 chr10 8106749 8106826 -132209939 + L2 LINE L2 2990 3069 -244 2336 58 4 0 chr10 8106826 8107158 -132209607 + AluY SINE Alu 7 339 0 504 263 72 13 chr10 8107539 8107691 -132209074 + L2 LINE L2 3150 3310 -3 1997 151 0 16 chr10 8107828 8108145 -132208620 + AluJb SINE Alu 1 312 0 676 235 31 131 chr10 8108367 8108628 -132208137 - L1MC5 LINE L1 -852 7109 6902 2246 109 0 40 chr10 8108628 8108805 -132207960 - AluSg1 SINE Alu -1 308 148 2197 88 3 10 chr10 8108805 8109102 -132207663 - AluY SINE Alu -16 295 1 2246 109 0 40 chr10 8109102 8109245 -132207520 - AluSg1 SINE Alu -161 148 1 676 235 31 131 chr10 8109245 8109396 -132207369 - L1MC5 LINE L1 -1059 6902 6738 1082 258 79 21 chr10 8109408 8110297 -132206468 - L1ME LINE L1 -4649 1431 464 1602 200 70 55 chr10 8110357 8110882 -132205883 - L1ME1 LINE L1 -8 6158 5626 608 200 39 15 chr10 8110883 8111013 -132205752 + LTR40b LTR ERVL 330 462 0 554 242 25 12 chr10 8111013 8111168 -132205597 - L1ME1 LINE L1 -1473 4673 4516 2019 137 7 3 chr10 8111168 8111467 -132205298 + AluSx SINE Alu 1 300 -12 361 219 0 62 chr10 8111472 8111568 -132205197 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 8111568 8111601 -132205164 + (TA)n Simple_repeat Simple_repeat 1 33 0 333 235 59 0 chr10 8111604 8111740 -132205025 - L1ME1 LINE L1 -1625 4521 4378 1892 183 28 5 chr10 8111760 8112148 -132204617 - L1MC1 LINE L1 -6 6327 5931 775 218 55 27 chr10 8112149 8112406 -132204359 - L1MA8 LINE L1 -8 6283 6020 400 217 0 0 chr10 8112404 8112487 -132204278 - L1MC1 LINE L1 -483 5695 5613 * 993 225 17 20 chr10 8112484 8112782 -132203983 - L1MC1 LINE L1 -834 5312 5016 2215 58 0 41 chr10 8113025 8113355 -132203410 + AluY SINE Alu 1 318 0 703 315 142 10 chr10 8114048 8114529 -132202236 - L2 LINE L2 -30 3283 2733 2059 128 6 10 chr10 8114816 8115129 -132201636 + AluSx SINE Alu 1 312 0 2604 135 31 2 chr10 8115592 8116013 -132200752 - Tigger2a DNA MER2_type -1 433 1 613 319 16 20 chr10 8116360 8116608 -132200157 + MIR SINE MIR 2 248 -14 468 296 63 6 chr10 8116660 8116819 -132199946 - MIR SINE MIR -92 170 3 23 0 0 0 chr10 8116946 8116969 -132199796 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 8117086 8117114 -132199651 + (TG)n Simple_repeat Simple_repeat 2 29 0 420 306 132 3 chr10 8117298 8117609 -132199156 - L1ME LINE L1 -452 5669 5319 2446 97 0 0 chr10 8119125 8119433 -132197332 - AluSp SINE Alu -5 308 1 210 71 0 0 chr10 8119903 8119931 -132196834 + (T)n Simple_repeat Simple_repeat 1 28 0 28 48 0 0 chr10 8120769 8120811 -132195954 + AT_rich Low_complexity Low_complexity 1 42 0 28 0 0 0 chr10 8122334 8122362 -132194403 + AT_rich Low_complexity Low_complexity 1 28 0 34 89 0 0 chr10 8123647 8123737 -132193028 + AT_rich Low_complexity Low_complexity 1 90 0 440 319 77 6 chr10 8125336 8125505 -132191260 - MIR3 SINE MIR -7 201 21 472 214 10 0 chr10 8125849 8125952 -132190813 - MER69 DNA AcHobo 0 2526 2423 305 250 147 38 chr10 8126091 8126275 -132190490 + L1ME3A LINE L1 5956 6159 -11 450 0 0 0 chr10 8126383 8126433 -132190332 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1903 160 4 0 chr10 8126434 8126715 -132190050 - AluSx SINE Alu -29 283 2 21 0 0 0 chr10 8126786 8126807 -132189958 + AT_rich Low_complexity Low_complexity 1 21 0 1551 166 6 94 chr10 8127615 8127946 -132188819 + AluJo SINE Alu 1 302 -10 2089 134 0 13 chr10 8128644 8128951 -132187814 + AluJb SINE Alu 3 305 -7 324 48 0 0 chr10 8129161 8129203 -132187562 + (CA)n Simple_repeat Simple_repeat 2 43 0 318 287 47 53 chr10 8129403 8129553 -132187212 + MIR3 SINE MIR 1 149 -59 278 200 0 0 chr10 8130049 8130099 -132186666 - MIR3 SINE MIR -34 174 125 417 255 83 88 chr10 8130242 8130434 -132186331 + L3 LINE CR1 1308 1498 -79 4960 224 73 27 chr10 8130474 8131463 -132185302 - L1MC4 LINE L1 0 8042 7100 2110 128 86 37 chr10 8131463 8131869 -132184896 - MSTC LTR MaLR -2 426 1 4960 224 73 27 chr10 8131869 8132081 -132184684 - L1MC4 LINE L1 -942 7100 6899 2283 92 0 3 chr10 8132081 8132376 -132184389 - AluSq SINE Alu -19 294 1 4960 224 73 27 chr10 8132376 8132748 -132184017 - L1MC4 LINE L1 -1143 6899 6546 882 159 11 21 chr10 8132748 8132937 -132183828 + L1MB4 LINE L1 5980 6166 -14 285 51 0 0 chr10 8132938 8132977 -132183788 + (CA)n Simple_repeat Simple_repeat 2 40 0 4960 224 73 27 chr10 8132977 8133281 -132183484 - L1MC4 LINE L1 -1495 6547 5984 1741 143 23 33 chr10 8133616 8133917 -132182848 - AluJb SINE Alu -14 298 1 393 286 129 18 chr10 8134195 8134366 -132182399 + MIR SINE MIR 47 236 -26 2293 92 10 0 chr10 8134642 8134945 -132181820 + AluY SINE Alu 1 306 -5 206 158 0 26 chr10 8135155 8135193 -132181572 + T-rich Low_complexity Low_complexity 1 37 0 908 280 70 45 chr10 8136016 8136642 -132180123 + Charlie7 DNA MER1_type 44 685 -1927 1003 253 37 0 chr10 8137006 8137247 -132179518 - MIR SINE MIR 0 262 13 371 315 178 35 chr10 8137282 8138020 -132178745 + L2 LINE L2 2246 3078 -194 236 280 101 0 chr10 8141754 8141875 -132174890 + MIR3 SINE MIR 10 148 -65 180 250 120 30 chr10 8143478 8143578 -132173187 + MIR SINE MIR 65 173 -89 582 224 104 37 chr10 8143652 8144116 -132172649 + MLT1H LTR MaLR 12 533 -16 2342 193 55 4 chr10 8144154 8144677 -132172088 + MER82 DNA MER2_type 10 559 -94 220 363 25 55 chr10 8144939 8145140 -132171625 + L2 LINE L2 2868 3062 -251 597 271 33 11 chr10 8145377 8145558 -132171207 + HsTC2b DNA Tc2 45 229 -686 341 168 25 134 chr10 8145593 8145712 -132171053 + HsTC2b DNA Tc2 806 911 -7 1598 167 3 84 chr10 8146953 8147276 -132169489 + AluJo SINE Alu 1 297 -15 555 305 159 11 chr10 8147518 8148015 -132168750 + L2 LINE L2 2713 3288 -25 181 331 94 24 chr10 8148097 8148224 -132168541 - L2 LINE L2 -1145 2169 2034 798 154 0 0 chr10 8148280 8148410 -132168355 + FLAM_C SINE Alu 1 130 -3 1813 184 3 3 chr10 8148596 8148900 -132167865 - AluJb SINE Alu -8 304 1 236 312 239 4 chr10 8148994 8149241 -132167524 - L2 LINE L2 -340 2974 2670 433 315 164 25 chr10 8149352 8149755 -132167010 - L2 LINE L2 0 3313 2855 387 0 0 0 chr10 8151205 8151248 -132165517 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 315 71 54 chr10 8152210 8152394 -132164371 - L2 LINE L2 -586 2728 2542 247 301 16 75 chr10 8152416 8152602 -132164163 + Charlie8 DNA MER1_type 13 187 -2230 1256 116 73 0 chr10 8152797 8152981 -132163784 + AluSg/x SINE Alu 112 305 -7 253 228 0 0 chr10 8153049 8153106 -132163659 + L1ME3A LINE L1 6103 6159 -11 2154 131 0 0 chr10 8153346 8153644 -132163121 + AluSx SINE Alu 1 298 -14 228 67 0 0 chr10 8153645 8153675 -132163090 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 197 292 0 97 chr10 8153765 8153837 -132162928 + L2 LINE L2 3127 3191 -81 2313 91 30 0 chr10 8154235 8154533 -132162232 - AluSx SINE Alu -1 311 5 375 23 0 0 chr10 8154817 8154861 -132161904 + (TA)n Simple_repeat Simple_repeat 1 44 0 1552 166 30 51 chr10 8156109 8156405 -132160360 + AluJo SINE Alu 1 290 -22 687 258 307 7 chr10 8156625 8157034 -132159731 + MLT1F1 LTR MaLR 40 567 0 1098 276 64 66 chr10 8157584 8158103 -132158662 + L1MC4 LINE L1 5941 6460 -1433 2301 82 13 38 chr10 8158103 8158420 -132158345 - AluSc SINE Alu 0 309 1 1098 276 64 66 chr10 8158420 8158455 -132158310 + L1MC4 LINE L1 6460 6494 -1399 893 102 8 8 chr10 8158455 8158573 -132158192 + FLAM_C SINE Alu 1 118 -15 1098 276 64 66 chr10 8158573 8158988 -132157777 + L1MC4 LINE L1 6494 7006 -887 253 272 0 16 chr10 8158988 8159113 -132157652 + GA-rich Low_complexity Low_complexity 2 124 0 276 253 117 101 chr10 8159169 8159626 -132157139 + L1MC4 LINE L1 7000 7448 -594 1978 139 0 0 chr10 8159626 8159899 -132156866 + AluJo SINE Alu 1 273 -39 276 253 117 101 chr10 8159899 8160273 -132156492 + L1MC4 LINE L1 7448 7965 -77 233 323 0 23 chr10 8161389 8161522 -132155243 + (TA)n Simple_repeat Simple_repeat 2 131 0 24 53 0 0 chr10 8161782 8161820 -132154945 + AT_rich Low_complexity Low_complexity 1 38 0 257 138 0 35 chr10 8161892 8161950 -132154815 + (TATG)n Simple_repeat Simple_repeat 3 58 0 577 275 53 6 chr10 8163803 8163974 -132152791 + MLT1K LTR MaLR 84 262 -326 30 0 0 0 chr10 8164275 8164305 -132152460 + AT_rich Low_complexity Low_complexity 1 30 0 1578 174 50 30 chr10 8164334 8164503 -132152262 - AluJo SINE Alu -8 304 125 2016 129 61 3 chr10 8164503 8164797 -132151968 - AluSx SINE Alu -1 311 1 1578 174 50 30 chr10 8164797 8164925 -132151840 - AluJo SINE Alu -187 125 1 409 246 27 27 chr10 8165439 8165549 -132151216 + L1ME LINE L1 5520 5629 -492 310 283 53 33 chr10 8165556 8165708 -132151057 + L1ME LINE L1 5672 5826 -295 1875 165 20 3 chr10 8165768 8166065 -132150700 - AluJb SINE Alu -10 302 1 2252 112 0 0 chr10 8167021 8167324 -132149441 + AluSx SINE Alu 1 303 -9 1002 164 0 0 chr10 8169233 8169413 -132147352 - AluJb SINE Alu 0 315 136 325 161 36 0 chr10 8170085 8170141 -132146624 + MLT1K LTR MaLR 531 588 0 2046 123 0 17 chr10 8170419 8170720 -132146045 + AluSx SINE Alu 15 310 -2 23 86 0 0 chr10 8171049 8171107 -132145658 + AT_rich Low_complexity Low_complexity 1 58 0 715 174 90 7 chr10 8173101 8173256 -132143509 - MER58 DNA MER1_type -173 168 1 2461 83 0 6 chr10 8173727 8174040 -132142725 - AluY SINE Alu 0 311 1 1030 146 6 6 chr10 8174043 8174208 -132142557 - FRAM SINE Alu -12 164 1 1277 133 0 15 chr10 8176385 8176400 -132140365 + AluSg/x SINE Alu 121 135 -177 2068 97 45 3 chr10 8176400 8176688 -132140077 + AluY SINE Alu 1 300 -11 1277 133 0 15 chr10 8176688 8176867 -132139898 + AluSg/x SINE Alu 135 312 0 262 281 0 0 chr10 8177117 8177192 -132139573 - MER20 DNA MER1_type -23 196 118 205 309 15 15 chr10 8177417 8177485 -132139280 + L2 LINE L2 3197 3264 -8 246 316 38 0 chr10 8177648 8177727 -132139038 + L2 LINE L2 3208 3289 -24 2328 90 10 0 chr10 8178009 8178310 -132138455 - AluSx SINE Alu -8 304 1 1389 224 126 43 chr10 8178310 8178864 -132137901 - L1MC5 LINE L1 -435 7526 6927 1914 102 0 0 chr10 8178879 8179123 -132137642 - AluSx SINE Alu -19 293 50 1511 172 0 44 chr10 8179821 8180117 -132136648 + AluJb SINE Alu 23 305 -7 368 298 51 6 chr10 8180398 8180556 -132136209 - L1ME LINE L1 -382 6237 6073 833 279 124 29 chr10 8181900 8182480 -132134285 - L1ME LINE L1 -3400 3244 2610 1594 199 7 0 chr10 8182726 8183033 -132133732 + Charlie1 DNA MER1_type 2057 2365 -396 1131 125 52 102 chr10 8183037 8183080 -132133685 + Charlie1 DNA MER1_type 2472 2516 -245 818 178 0 0 chr10 8183080 8183209 -132133556 + FLAM_A SINE Alu 1 129 -4 1131 125 52 102 chr10 8183209 8183356 -132133409 + Charlie1 DNA MER1_type 2516 2644 -117 1964 147 13 3 chr10 8183356 8183663 -132133102 - AluSx SINE Alu -2 310 1 1131 125 52 102 chr10 8183663 8183776 -132132989 + Charlie1 DNA MER1_type 2644 2761 0 811 308 97 19 chr10 8183776 8184405 -132132360 - L1ME LINE L1 -4680 2145 1300 383 293 87 45 chr10 8184467 8184709 -132132056 - L1ME LINE L1 -5264 1370 1119 731 273 32 67 chr10 8185175 8185363 -132131402 + MIR SINE MIR 1 179 -83 2234 108 0 7 chr10 8185363 8185495 -132131270 + AluSp SINE Alu 1 132 -181 405 0 0 0 chr10 8185495 8185540 -132131225 + (CA)n Simple_repeat Simple_repeat 2 46 0 2234 108 0 7 chr10 8185540 8185704 -132131061 + AluSp SINE Alu 132 295 -18 731 273 32 67 chr10 8185704 8185768 -132130997 + MIR SINE MIR 179 244 -18 243 338 27 0 chr10 8185743 8185817 -132130948 + L2 LINE L2 3186 3261 -11 * 263 288 40 45 chr10 8186461 8186659 -132130106 + L1ME3A LINE L1 5756 5952 -218 432 0 0 0 chr10 8186878 8186926 -132129839 + (TA)n Simple_repeat Simple_repeat 1 48 0 426 330 124 5 chr10 8186949 8187167 -132129598 + MIR SINE MIR 18 261 -1 214 290 75 21 chr10 8187170 8187263 -132129502 - MIR SINE MIR -152 110 13 2332 98 0 7 chr10 8187408 8187714 -132129051 - AluSx SINE Alu -8 304 1 364 247 104 26 chr10 8187877 8188031 -132128734 - MLT1I LTR MaLR -14 395 230 225 273 23 31 chr10 8188458 8188586 -132128179 + C-rich Low_complexity Low_complexity 5 131 0 864 166 7 7 chr10 8188769 8188920 -132127845 - FRAM SINE Alu -25 151 1 2334 91 10 3 chr10 8188928 8189235 -132127530 - AluSq SINE Alu -4 309 1 1621 181 21 3 chr10 8189235 8189522 -132127243 - AluJb SINE Alu -19 293 1 2199 104 7 10 chr10 8189940 8190238 -132126527 + AluSq SINE Alu 1 297 -16 1587 158 9 70 chr10 8190561 8190891 -132125874 - AluJo SINE Alu -2 310 1 253 253 21 63 chr10 8191034 8191129 -132125636 + MIR3 SINE MIR 103 193 -15 1841 168 3 13 chr10 8191211 8191520 -132125245 + AluJb SINE Alu 1 306 -6 232 382 0 0 chr10 8191610 8191686 -132125079 + MIR SINE MIR 64 139 -69 23 68 0 0 chr10 8194835 8194879 -132121886 + AT_rich Low_complexity Low_complexity 1 44 0 187 298 107 12 chr10 8194910 8194994 -132121771 - L3 LINE CR1 -902 675 584 21 36 0 0 chr10 8195396 8195424 -132121341 + AT_rich Low_complexity Low_complexity 1 28 0 375 170 0 0 chr10 8198602 8198678 -132118087 - AluJb SINE Alu 0 305 230 895 172 86 6 chr10 8198680 8198854 -132117911 - AluJb SINE Alu -124 188 1 2008 119 3 17 chr10 8198864 8199166 -132117599 - AluSx SINE Alu -14 298 1 2509 55 6 6 chr10 8199310 8199621 -132117144 - AluY SINE Alu 0 311 1 203 278 44 67 chr10 8199624 8199714 -132117051 - L2 LINE L2 0 3272 3185 2402 91 0 0 chr10 8199918 8200215 -132116550 + AluSq SINE Alu 1 297 -16 1641 158 21 32 chr10 8200522 8200829 -132115936 + AluJo SINE Alu 1 304 0 2077 119 17 3 chr10 8200830 8201132 -132115633 + AluSc SINE Alu 1 306 -3 988 98 0 0 chr10 8201153 8201285 -132115480 - AluSq/x SINE Alu -181 132 1 2054 108 4 4 chr10 8202062 8202340 -132114425 - AluSc SINE Alu -31 278 1 696 153 21 162 chr10 8202381 8202567 -132114198 + MER3 DNA MER1_type 1 147 -62 1594 189 3 24 chr10 8202567 8202863 -132113902 - AluJo SINE Alu -22 290 1 696 153 21 162 chr10 8202863 8202917 -132113848 + MER3 DNA MER1_type 147 207 -2 2210 48 0 11 chr10 8203599 8204069 -132112696 + AluY SINE Alu 1 282 -29 1591 6 0 0 chr10 8203890 8204134 -132112631 + (GAAA)n Simple_repeat Simple_repeat 2 423 0 1826 152 14 3 chr10 8204142 8204433 -132112332 + AluJo SINE Alu 5 296 -16 312 27 0 0 chr10 8205498 8205535 -132111230 + (TA)n Simple_repeat Simple_repeat 1 37 0 2132 105 3 7 chr10 8205535 8205831 -132110934 - AluSx SINE Alu -17 295 1 1247 122 0 0 chr10 8206950 8207130 -132109635 - AluSg/x SINE Alu -5 307 128 213 39 0 0 chr10 8207140 8207166 -132109599 + (CA)n Simple_repeat Simple_repeat 2 27 0 2154 86 0 58 chr10 8207243 8207570 -132109195 + AluY SINE Alu 1 308 -3 2331 86 0 0 chr10 8207570 8207871 -132108894 + AluSq SINE Alu 1 301 -12 1974 116 0 24 chr10 8208165 8208280 -132108485 + AluSx SINE Alu 22 138 -174 2211 82 0 0 chr10 8208280 8208599 -132108166 + AluSg SINE Alu 1 319 0 1974 116 0 24 chr10 8208599 8208774 -132107991 + AluSx SINE Alu 138 306 -6 1693 171 10 0 chr10 8209074 8209373 -132107392 + AluJb SINE Alu 1 302 -10 1810 168 3 0 chr10 8210970 8211261 -132105504 - AluJo SINE Alu -20 292 1 234 192 77 0 chr10 8212052 8212071 -132104694 + AluSg/x SINE Alu 113 135 -165 288 105 0 0 chr10 8212071 8212109 -132104656 + Alu SINE Alu 3 40 -262 239 150 25 0 chr10 8212274 8212314 -132104451 + Alu SINE Alu 1 41 -92 1432 150 70 42 chr10 8212440 8212726 -132104039 + AluJo SINE Alu 1 294 -18 2008 102 74 0 chr10 8212833 8213117 -132103648 + AluSp SINE Alu 1 305 -8 320 310 124 8 chr10 8216579 8216708 -132100057 - MIR3 SINE MIR -29 179 36 254 231 15 31 chr10 8217268 8217333 -132099432 + CT-rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr10 8217455 8217479 -132099286 + GC_rich Low_complexity Low_complexity 1 24 0 218 229 49 33 chr10 8218576 8218637 -132098128 + polypurine Low_complexity Low_complexity 3 64 0 204 40 0 0 chr10 8219859 8219884 -132096881 + (TA)n Simple_repeat Simple_repeat 1 25 0 351 0 0 0 chr10 8219884 8219923 -132096842 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr10 8226406 8226449 -132090316 + (TG)n Simple_repeat Simple_repeat 1 43 0 217 143 0 24 chr10 8228687 8228729 -132088036 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 249 219 0 0 chr10 8228835 8228908 -132087857 + A-rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 8229735 8229763 -132087002 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 8230670 8230692 -132086073 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 8231254 8231283 -132085482 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr10 8234187 8234239 -132082526 + GC_rich Low_complexity Low_complexity 1 52 0 291 164 0 0 chr10 8234519 8234580 -132082185 + GA-rich Low_complexity Low_complexity 1 61 0 216 0 0 0 chr10 8240822 8240846 -132075919 + (TC)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 8242116 8242139 -132074626 + AT_rich Low_complexity Low_complexity 1 23 0 351 150 0 0 chr10 8244024 8244084 -132072681 + (T)n Simple_repeat Simple_repeat 1 60 0 2230 98 3 0 chr10 8245006 8245311 -132071454 - AluSx SINE Alu -6 306 1 228 67 0 0 chr10 8245455 8245485 -132071280 + (T)n Simple_repeat Simple_repeat 1 30 0 222 220 0 0 chr10 8245717 8245776 -132070989 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8246185 8246216 -132070549 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2414 61 3 3 chr10 8247291 8247602 -132069163 + AluY SINE Alu 1 311 0 2097 109 0 3 chr10 8248232 8248526 -132068239 + AluSx SINE Alu 9 301 -11 277 285 30 79 chr10 8250842 8251007 -132065758 - MIR SINE MIR -46 216 60 2404 78 0 0 chr10 8252618 8252926 -132063839 + AluSg SINE Alu 1 308 -2 180 77 0 0 chr10 8253451 8253477 -132063288 + (A)n Simple_repeat Simple_repeat 1 26 0 282 143 0 0 chr10 8254250 8254299 -132062466 + (A)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8255986 8256011 -132060754 + AT_rich Low_complexity Low_complexity 1 25 0 2255 93 0 0 chr10 8256026 8256328 -132060437 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 8256774 8256798 -132059967 + AT_rich Low_complexity Low_complexity 1 24 0 2221 109 0 3 chr10 8257010 8257322 -132059443 - AluSx SINE Alu -1 311 1 246 379 76 8 chr10 8258006 8258138 -132058627 + MIR3 SINE MIR 33 173 -35 2098 128 0 3 chr10 8258209 8258514 -132058251 - AluSx SINE Alu -8 304 1 2147 112 3 0 chr10 8258580 8258885 -132057880 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 8259175 8259195 -132057570 + (T)n Simple_repeat Simple_repeat 1 20 0 1930 118 0 0 chr10 8259955 8260227 -132056538 + AluSx SINE Alu 11 282 -30 339 44 0 0 chr10 8260230 8260275 -132056490 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 309 353 25 0 chr10 8261193 8261315 -132055450 - MIR SINE MIR -45 217 93 187 330 45 36 chr10 8261324 8261436 -132055329 + L2 LINE L2 3201 3313 0 892 221 96 12 chr10 8261818 8262058 -132054707 - MLT1D LTR MaLR -39 466 207 2457 65 0 0 chr10 8262689 8262999 -132053766 + AluY SINE Alu 1 310 -1 2154 111 10 0 chr10 8264065 8264372 -132052393 + AluSx SINE Alu 1 310 -2 1495 159 8 8 chr10 8265279 8265537 -132051228 - AluJb SINE Alu -54 258 1 2278 100 0 0 chr10 8265638 8265978 -132050787 + AluSc SINE Alu 1 340 0 504 198 159 32 chr10 8266594 8266720 -132050045 - MIR SINE MIR -19 243 102 1933 116 0 10 chr10 8266785 8267077 -132049688 - AluSx SINE Alu -1 311 23 988 153 47 0 chr10 8267362 8267532 -132049233 - AluJo SINE Alu -131 181 4 2122 107 0 0 chr10 8267771 8268061 -132048704 + AluSc SINE Alu 2 291 -18 1721 142 0 37 chr10 8268073 8268396 -132048369 + AluJo SINE Alu 1 311 -1 28 29 0 0 chr10 8268951 8268986 -132047779 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 0 32 chr10 8268986 8269299 -132047466 + AluSx SINE Alu 1 303 -9 1492 166 7 25 chr10 8269318 8269595 -132047170 - AluJo SINE Alu -40 272 1 1814 62 25 16 chr10 8269977 8270221 -132046544 - L1PA10 LINE L1 -3 6165 5920 21 0 0 0 chr10 8270257 8270278 -132046487 + AT_rich Low_complexity Low_complexity 1 21 0 1436 196 13 16 chr10 8270873 8271179 -132045586 + AluJo SINE Alu 1 305 -7 2136 92 0 0 chr10 8271444 8271727 -132045038 - AluSg SINE Alu -27 283 1 382 298 0 0 chr10 8272676 8272770 -132043995 + MIR SINE MIR 169 262 0 879 105 0 53 chr10 8272785 8272918 -132043847 + FLAM_C SINE Alu 2 127 -6 1208 154 112 63 chr10 8272956 8273242 -132043523 + AluSp SINE Alu 1 300 -3 278 139 23 0 chr10 8273244 8273287 -132043478 + AluJ/F(R)AM SINE Alu 168 211 -91 1223 110 0 16 chr10 8273319 8273501 -132043264 + AluSg/x SINE Alu 132 310 0 2006 132 0 0 chr10 8274453 8274741 -132042024 + AluSx SINE Alu 1 288 -24 778 149 0 22 chr10 8274874 8275008 -132041757 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr10 8276121 8276149 -132040616 + AT_rich Low_complexity Low_complexity 1 28 0 1871 126 0 4 chr10 8276151 8276429 -132040336 + AluSx SINE Alu 3 279 -33 1322 154 14 0 chr10 8276460 8276674 -132040091 + AluSg/x SINE Alu 86 302 -10 218 310 42 0 chr10 8276737 8276808 -132039957 + MIR SINE MIR 111 184 -78 227 167 368 53 chr10 8276876 8276990 -132039775 + L2 LINE L2 3164 3313 0 396 246 70 91 chr10 8277002 8277201 -132039564 - MIR SINE MIR -4 258 64 285 212 273 0 chr10 8278013 8278112 -132038653 + L1ME4a LINE L1 5996 6121 0 405 0 0 0 chr10 8278270 8278315 -132038450 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 2005 128 3 0 chr10 8278394 8278691 -132038074 - AluSx SINE Alu -14 298 1 263 94 0 19 chr10 8278697 8278750 -132038015 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1565 179 14 10 chr10 8278752 8279048 -132037717 - AluJb SINE Alu -15 297 1 25 31 0 0 chr10 8279272 8279304 -132037461 + AT_rich Low_complexity Low_complexity 1 32 0 704 50 0 40 chr10 8279675 8279775 -132036990 + L1PA5 LINE L1 6059 6154 0 235 384 47 6 chr10 8280065 8280237 -132036528 + MIR3 SINE MIR 28 206 -2 207 217 43 0 chr10 8280610 8280656 -132036109 + MIR SINE MIR 96 143 -65 1886 135 0 42 chr10 8280718 8281030 -132035735 - AluSg SINE Alu -11 299 1 2093 101 0 0 chr10 8282004 8282290 -132034475 - AluSg SINE Alu -4 306 21 1493 167 27 38 chr10 8282331 8282624 -132034141 + AluJb SINE Alu 1 290 -22 2753 151 11 6 chr10 8285563 8286039 -132030726 - L1PA15 LINE L1 0 6165 5688 668 301 51 9 chr10 8286039 8286255 -132030510 + MIR SINE MIR 23 247 -15 335 317 18 41 chr10 8286588 8286809 -132029956 - HAL1 LINE L1 0 2507 2292 882 182 17 17 chr10 8286839 8287020 -132029745 + MER53 DNA DNA 1 181 -8 600 231 88 6 chr10 8287021 8287181 -132029584 - FAM SINE Alu -2 173 1 33 69 0 30 chr10 8288088 8288121 -132028644 + AT_rich Low_complexity Low_complexity 1 33 -65 2181 67 3 20 chr10 8288121 8288418 -132028347 - AluY SINE Alu -19 292 1 33 69 0 30 chr10 8288418 8288485 -132028280 + AT_rich Low_complexity Low_complexity 33 98 0 1733 140 13 33 chr10 8288689 8288996 -132027769 - AluJo SINE Alu -11 301 1 1917 116 0 41 chr10 8289926 8290251 -132026514 + AluSx SINE Alu 1 313 0 364 289 159 15 chr10 8290463 8290664 -132026101 + MIR SINE MIR 9 238 -24 797 146 8 0 chr10 8291253 8291383 -132025382 + AluSg/x SINE Alu 182 312 0 513 0 0 0 chr10 8291661 8291718 -132025047 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1655 156 0 32 chr10 8291724 8292007 -132024758 - AluJo SINE Alu -38 274 1 228 122 0 0 chr10 8292640 8292681 -132024084 + (CA)n Simple_repeat Simple_repeat 1 41 0 314 234 317 0 chr10 8292863 8293008 -132023757 - MIR SINE MIR -61 201 11 340 354 48 7 chr10 8293015 8293162 -132023603 - MIR3 SINE MIR -33 175 23 1022 146 6 0 chr10 8293913 8294078 -132022687 - AluJb SINE Alu -11 301 136 619 284 83 17 chr10 8294437 8294667 -132022098 - MIR SINE MIR -13 249 4 1601 178 7 3 chr10 8295109 8295401 -132021364 + AluJo SINE Alu 1 293 -19 1910 139 0 3 chr10 8295403 8295691 -132021074 + AluSg SINE Alu 1 287 -23 198 118 0 0 chr10 8295704 8295738 -132021027 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 359 278 35 66 chr10 8295747 8295945 -132020820 - MIR3 SINE MIR -15 193 2 1778 152 20 3 chr10 8296734 8297030 -132019735 - AluJb SINE Alu -11 301 1 273 269 0 0 chr10 8297078 8297130 -132019635 + AluJ/monomer SINE Alu 1 52 -248 222 220 0 0 chr10 8297467 8297526 -132019239 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8297935 8297966 -132018799 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2393 61 3 3 chr10 8299041 8299352 -132017413 + AluY SINE Alu 1 311 0 2068 109 0 3 chr10 8299982 8300276 -132016489 + AluSx SINE Alu 9 301 -11 300 279 30 79 chr10 8302592 8302757 -132014008 - MIR SINE MIR -46 216 60 2410 66 0 0 chr10 8304369 8304671 -132012094 + AluSg SINE Alu 1 302 -8 1983 126 10 3 chr10 8304702 8305003 -132011762 + AluSx SINE Alu 1 303 -9 23 54 0 0 chr10 8305628 8305665 -132011100 + AT_rich Low_complexity Low_complexity 1 37 0 512 321 101 42 chr10 8306032 8306645 -132010120 - L2 LINE L2 -1 3312 2668 977 296 302 24 chr10 8306749 8308272 -132008493 - L2 LINE L2 -1296 2018 72 994 154 56 2 chr10 8308556 8308843 -132007922 + MER2 DNA MER2_type 1 345 0 1469 171 7 36 chr10 8308970 8309245 -132007520 + AluJo SINE Alu 1 267 -45 42 0 0 0 chr10 8309259 8309301 -132007464 + AT_rich Low_complexity Low_complexity 1 42 0 429 20 0 0 chr10 8309306 8309356 -132007409 + (TG)n Simple_repeat Simple_repeat 2 51 0 540 234 170 23 chr10 8310460 8310678 -132006087 - MER112 DNA MER1_type -3 257 8 26 0 0 0 chr10 8312244 8312270 -132004495 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr10 8312592 8312616 -132004149 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 8314025 8314046 -132002719 + AT_rich Low_complexity Low_complexity 1 21 0 2199 108 23 3 chr10 8314528 8314834 -132001931 + AluSq SINE Alu 1 312 -1 664 106 0 58 chr10 8314938 8315042 -132001723 + AluJ/FLAM SINE Alu 1 98 -214 406 236 87 24 chr10 8317205 8317332 -131999433 + L2 LINE L2 3173 3307 -6 1323 171 148 4 chr10 8318406 8318670 -131998095 - AluJb SINE Alu 0 302 1 1539 191 24 3 chr10 8318926 8319220 -131997545 + AluJb SINE Alu 1 300 -12 27 49 0 0 chr10 8319830 8319871 -131996894 + AT_rich Low_complexity Low_complexity 1 41 0 466 269 99 60 chr10 8320169 8320370 -131996395 - MIR SINE MIR -51 211 3 207 211 19 0 chr10 8321450 8321502 -131995263 + GA-rich Low_complexity Low_complexity 2 54 0 1852 177 0 7 chr10 8321676 8321986 -131994779 - AluJb SINE Alu -4 308 1 405 226 169 16 chr10 8322857 8322981 -131993784 + HsTC2 DNA Tc2 2 144 -1754 * 1198 229 108 20 chr10 8322979 8323386 -131993379 + HsTC2 DNA Tc2 1282 1900 0 1687 157 0 41 chr10 8323443 8323763 -131993002 - AluSx SINE Alu 0 308 1 780 304 170 23 chr10 8324052 8324215 -131992550 - L2 LINE L2 0 3313 3175 2024 125 7 0 chr10 8324215 8324534 -131992231 + AluSx SINE Alu 1 321 0 2203 63 45 0 chr10 8324536 8324823 -131991942 + AluY SINE Alu 1 300 -11 780 304 170 23 chr10 8324823 8325312 -131991453 - L2 LINE L2 -138 3175 2553 5833 148 16 16 chr10 8325729 8326868 -131989897 - L1MC1 LINE L1 0 6333 5196 568 304 44 5 chr10 8326957 8327161 -131989604 - MIR SINE MIR -8 254 43 529 351 67 33 chr10 8327530 8328049 -131988716 - L2 LINE L2 -650 2664 2128 289 277 225 8 chr10 8328093 8328342 -131988423 + HAL1 LINE L1 16 318 -2189 1416 276 161 21 chr10 8328546 8328798 -131987967 + HAL1 LINE L1 640 855 -1652 396 0 0 0 chr10 8328798 8328842 -131987923 + (CA)n Simple_repeat Simple_repeat 2 45 0 1416 276 161 21 chr10 8328842 8329524 -131987241 + HAL1 LINE L1 855 1705 -802 180 242 0 0 chr10 8329659 8329692 -131987073 - L2 LINE L2 -86 3186 3154 2080 142 9 22 chr10 8329893 8330209 -131986556 + AluJo SINE Alu 1 312 0 198 250 0 0 chr10 8330495 8330539 -131986226 + L2 LINE L2 3265 3308 -5 247 301 16 75 chr10 8331960 8332146 -131984619 - Charlie8 DNA MER1_type -2230 187 13 216 315 71 54 chr10 8332168 8332352 -131984413 + L2 LINE L2 2542 2728 -586 387 0 0 0 chr10 8333314 8333357 -131983408 + (TG)n Simple_repeat Simple_repeat 2 44 0 433 315 164 25 chr10 8334807 8335210 -131981555 + L2 LINE L2 2855 3313 0 236 312 239 4 chr10 8335321 8335568 -131981197 + L2 LINE L2 2670 2974 -340 1826 181 3 3 chr10 8335662 8335966 -131980799 + AluJb SINE Alu 1 304 -8 798 154 0 0 chr10 8336152 8336282 -131980483 - FLAM_C SINE Alu -3 130 1 181 331 94 24 chr10 8336338 8336465 -131980300 + L2 LINE L2 2034 2169 -1145 555 305 159 11 chr10 8336547 8337044 -131979721 - L2 LINE L2 -25 3288 2713 1601 166 3 86 chr10 8337286 8337611 -131979154 - AluJo SINE Alu -14 298 1 341 168 25 134 chr10 8338853 8338972 -131977793 - HsTC2b DNA Tc2 -2 916 811 597 271 33 11 chr10 8339007 8339188 -131977577 - HsTC2b DNA Tc2 -686 229 45 220 363 25 55 chr10 8339425 8339626 -131977139 - L2 LINE L2 -251 3062 2868 2342 193 55 4 chr10 8339888 8340411 -131976354 - MER82 DNA MER2_type -94 559 10 582 224 104 37 chr10 8340449 8340913 -131975852 - MLT1H LTR MaLR -16 533 12 180 250 120 30 chr10 8340987 8341087 -131975678 - MIR SINE MIR -89 173 65 236 280 101 0 chr10 8342690 8342811 -131973954 - MIR3 SINE MIR -65 143 10 413 211 72 53 chr10 8345211 8345419 -131971346 + L1MC4 LINE L1 7831 8042 0 26 0 0 27 chr10 8345419 8345430 -131971335 + AT_rich Low_complexity Low_complexity 1 11 -25 2168 109 3 0 chr10 8345430 8345715 -131971050 + AluSg SINE Alu 1 286 -24 26 0 0 27 chr10 8345715 8345740 -131971025 + AT_rich Low_complexity Low_complexity 11 36 0 21 36 0 0 chr10 8346842 8346870 -131969895 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 8347017 8347050 -131969715 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr10 8347119 8347140 -131969625 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 8347525 8347578 -131969187 + AT_rich Low_complexity Low_complexity 1 53 0 483 229 62 3 chr10 8347619 8347769 -131968996 + L1ME3A LINE L1 5790 5946 -224 2238 82 0 20 chr10 8348075 8348361 -131968404 + AluY SINE Alu 1 282 -29 216 0 0 0 chr10 8348361 8348385 -131968380 + (CA)n Simple_repeat Simple_repeat 1 24 0 193 122 0 61 chr10 8348709 8348758 -131968007 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 358 107 0 18 chr10 8349577 8349633 -131967132 - MER58 DNA MER1_type 0 2420 2366 333 356 109 24 chr10 8349651 8349898 -131966867 - L2 LINE L2 -172 3100 2833 2032 162 0 3 chr10 8351063 8351371 -131965394 - AluJb SINE Alu -5 307 1 190 218 73 0 chr10 8352193 8352248 -131964517 - MIR SINE MIR -60 148 90 1828 91 0 8 chr10 8352788 8353042 -131963723 + L1PA6 LINE L1 5903 6154 0 243 265 0 0 chr10 8354329 8354431 -131962334 + GA-rich Low_complexity Low_complexity 4 105 0 187 197 0 28 chr10 8354579 8354650 -131962115 + GA-rich Low_complexity Low_complexity 2 70 0 542 159 28 28 chr10 8354802 8354947 -131961818 + GA-rich Low_complexity Low_complexity 6 150 0 22 35 0 0 chr10 8356168 8356197 -131960568 + AT_rich Low_complexity Low_complexity 1 29 0 321 208 62 92 chr10 8356244 8356374 -131960391 - MIR SINE MIR -70 192 67 195 232 116 29 chr10 8356895 8356964 -131959801 + MIR SINE MIR 176 250 -12 723 244 87 30 chr10 8357798 8358028 -131958737 - MIR SINE MIR -19 243 1 1113 193 193 12 chr10 8358248 8358360 -131958405 + AluJo SINE Alu 1 91 -211 279 0 0 0 chr10 8358360 8358391 -131958374 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1113 193 193 12 chr10 8358391 8358527 -131958238 + AluJo SINE Alu 91 294 -8 22 35 0 0 chr10 8358656 8358685 -131958080 + AT_rich Low_complexity Low_complexity 1 29 0 254 199 15 31 chr10 8359008 8359083 -131957682 + MIR SINE MIR 12 85 -123 320 252 70 0 chr10 8359540 8359655 -131957110 - MIR SINE MIR -45 217 95 235 296 12 0 chr10 8359820 8359901 -131956864 - MIR3 SINE MIR -2 206 125 347 228 152 0 chr10 8361658 8361750 -131955015 - MER94 DNA DNA -10 124 19 259 293 199 18 chr10 8362217 8362436 -131954329 + MIR SINE MIR 7 262 0 213 170 21 21 chr10 8362883 8362930 -131953835 + L2 LINE L2 3214 3260 -12 2054 122 0 0 chr10 8363068 8363347 -131953418 + AluSg SINE Alu 1 279 -31 432 37 0 0 chr10 8363350 8363404 -131953361 + (CA)n Simple_repeat Simple_repeat 2 55 0 2371 87 7 0 chr10 8364012 8364311 -131952454 + AluSc SINE Alu 1 301 -8 220 316 38 0 chr10 8364593 8364672 -131952093 - L2 LINE L2 -24 3289 3208 185 309 15 15 chr10 8364835 8364903 -131951862 - L2 LINE L2 -8 3264 3197 261 281 0 0 chr10 8365128 8365203 -131951562 + MER20 DNA MER1_type 118 196 -23 1297 128 0 15 chr10 8365453 8365632 -131951133 - AluSg/x SINE Alu 0 312 135 2113 94 45 3 chr10 8365632 8365920 -131950845 - AluY SINE Alu -11 300 1 1297 128 0 15 chr10 8365920 8365935 -131950830 - AluSg/x SINE Alu -177 135 121 242 239 0 0 chr10 8366869 8366915 -131949850 - L2 LINE L2 -90 3182 3137 1754 152 24 14 chr10 8366988 8367284 -131949481 + AluJo SINE Alu 1 299 -13 277 346 155 30 chr10 8367489 8367818 -131948947 - L2 LINE L2 -548 2766 2397 691 190 0 0 chr10 8368280 8368396 -131948369 - FRAM SINE Alu -20 156 41 23 0 0 0 chr10 8368492 8368515 -131948250 + AT_rich Low_complexity Low_complexity 1 23 0 2462 72 0 13 chr10 8368653 8368957 -131947808 + AluSp SINE Alu 1 300 -13 630 226 0 0 chr10 8370046 8370161 -131946604 + AluJb SINE Alu 2 116 -196 240 86 0 0 chr10 8370164 8370199 -131946566 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 906 127 95 104 chr10 8370741 8370962 -131945803 - AluJo SINE Alu -19 293 75 2549 66 0 3 chr10 8370962 8371267 -131945498 - AluY SINE Alu -5 306 3 524 250 0 0 chr10 8371979 8372095 -131944670 + FRAM SINE Alu 41 156 -20 277 346 155 30 chr10 8372557 8372886 -131943879 + L2 LINE L2 2397 2766 -548 1754 152 24 14 chr10 8373091 8373387 -131943378 - AluJo SINE Alu -13 299 1 242 239 0 0 chr10 8373460 8373506 -131943259 + L2 LINE L2 3137 3182 -90 662 66 72 12 chr10 8374136 8374302 -131942463 + (TCTA)n Simple_repeat Simple_repeat 4 179 0 730 83 59 12 chr10 8374340 8374509 -131942256 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 464 198 0 0 chr10 8374509 8374590 -131942175 - FLAM_A SINE Alu -22 120 40 2212 113 0 0 chr10 8375011 8375303 -131941462 - AluSx SINE Alu -9 303 12 1569 161 73 11 chr10 8375492 8375808 -131940957 + AluJb SINE Alu 1 312 0 419 241 169 76 chr10 8376926 8377019 -131939746 - L2 LINE L2 -860 2454 2371 1142 112 0 6 chr10 8377019 8377198 -131939567 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1481 175 34 11 chr10 8377204 8377472 -131939293 - AluSx SINE Alu -38 274 1 1002 192 12 0 chr10 8377475 8377647 -131939118 - FAM SINE Alu -1 174 1 419 241 169 76 chr10 8377647 8377832 -131938933 - L2 LINE L2 -948 2366 2138 808 126 0 44 chr10 8378389 8378524 -131938241 - FLAM_C SINE Alu 0 133 5 1621 168 8 0 chr10 8379057 8379319 -131937446 + AluJo SINE Alu 27 290 -22 250 287 0 25 chr10 8379925 8380025 -131936740 - MIR SINE MIR -62 146 63 188 283 62 26 chr10 8381191 8381304 -131935461 + MIR SINE MIR 90 206 -56 324 301 29 0 chr10 8381348 8381451 -131935314 + MIR SINE MIR 131 236 -26 2061 137 7 10 chr10 8381830 8382136 -131934629 - AluJb SINE Alu -7 305 1 359 237 43 21 chr10 8382174 8382267 -131934498 + L2 LINE L2 3197 3291 -22 444 106 77 135 chr10 8383107 8383157 -131933608 + HY3 scRNA scRNA 1 43 -58 1951 154 3 10 chr10 8383157 8383468 -131933297 - AluJo SINE Alu -3 309 1 444 106 77 135 chr10 8383468 8383521 -131933244 + HY3 scRNA scRNA 43 98 -3 2024 155 30 0 chr10 8383625 8383928 -131932837 - AluSx SINE Alu 0 312 1 260 227 41 21 chr10 8384211 8384308 -131932457 + CT-rich Low_complexity Low_complexity 4 102 0 312 273 132 34 chr10 8385331 8385536 -131931229 - MER112 DNA MER1_type -23 237 13 402 253 156 21 chr10 8385691 8385928 -131930837 - L1ME4a LINE L1 -1 6120 5852 2382 100 0 0 chr10 8385968 8386279 -131930486 + AluSq SINE Alu 1 311 -2 1593 149 31 35 chr10 8386606 8386867 -131929898 - AluJo SINE Alu -50 262 3 2003 143 0 19 chr10 8387028 8387335 -131929430 - AluSx SINE Alu -11 301 1 225 278 31 10 chr10 8388841 8388938 -131927827 + GA-rich Low_complexity Low_complexity 5 103 0 255 236 0 0 chr10 8389226 8389298 -131927467 + (CA)n Simple_repeat Simple_repeat 2 73 0 2202 110 0 10 chr10 8389308 8389618 -131927147 - AluSx SINE Alu -5 307 1 332 291 10 65 chr10 8390705 8390765 -131926000 - MER5A DNA MER1_type -1 188 126 1808 147 3 52 chr10 8390765 8391072 -131925693 + AluJo SINE Alu 1 292 -20 332 291 10 65 chr10 8391072 8391210 -131925555 - MER5A DNA MER1_type -63 126 1 209 33 33 0 chr10 8392794 8392824 -131923941 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 23 54 0 0 chr10 8392868 8392905 -131923860 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 8393272 8393293 -131923472 + AT_rich Low_complexity Low_complexity 1 21 0 1576 199 31 0 chr10 8393601 8393887 -131922878 - AluJb SINE Alu -17 295 1 376 306 25 0 chr10 8396712 8396833 -131919932 + MIR SINE MIR 28 151 -111 702 77 0 0 chr10 8396840 8396931 -131919834 - AluY SINE Alu -16 295 205 271 260 31 10 chr10 8396936 8397032 -131919733 + MIR SINE MIR 150 247 -15 629 270 54 5 chr10 8397543 8397728 -131919037 + MIR SINE MIR 59 252 -10 415 188 77 60 chr10 8398297 8398414 -131918351 - HAL1 LINE L1 0 2507 2389 717 142 35 0 chr10 8398422 8398535 -131918230 - FLAM_A SINE Alu -10 132 16 983 249 127 53 chr10 8398536 8398907 -131917858 - HAL1 LINE L1 -127 2380 2038 2180 126 0 13 chr10 8398907 8399217 -131917548 + AluSx SINE Alu 1 306 -6 983 249 127 53 chr10 8399217 8399491 -131917274 - HAL1 LINE L1 -469 2038 1687 703 212 53 11 chr10 8399488 8399677 -131917088 - HAL1 LINE L1 -1042 1465 1269 * 461 167 8 92 chr10 8399680 8399800 -131916965 - FRAM SINE Alu -7 169 60 278 282 76 13 chr10 8400079 8400215 -131916550 - MIR3 SINE MIR -14 194 51 1987 135 0 44 chr10 8400371 8400689 -131916076 + AluJo SINE Alu 1 304 -8 743 176 7 54 chr10 8400738 8400886 -131915879 + FLAM_C SINE Alu 2 142 -1 731 191 5 53 chr10 8401894 8402082 -131914683 - MER53 DNA DNA 0 189 11 29 0 0 0 chr10 8402211 8402240 -131914525 + AT_rich Low_complexity Low_complexity 1 29 0 686 203 16 0 chr10 8402240 8402363 -131914402 - FLAM_C SINE Alu -17 126 2 979 178 0 0 chr10 8402555 8402707 -131914058 + FRAM SINE Alu 5 156 -10 239 333 15 0 chr10 8402975 8403041 -131913724 + (CACG)n Simple_repeat Simple_repeat 4 70 0 240 86 0 0 chr10 8403041 8403076 -131913689 + (TC)n Simple_repeat Simple_repeat 1 35 0 524 320 50 11 chr10 8403748 8404029 -131912736 + L1ME4a LINE L1 5625 5916 -205 303 262 66 16 chr10 8404157 8404279 -131912486 + L1ME4a LINE L1 5985 6112 -9 1314 107 11 0 chr10 8404547 8404724 -131912041 + AluSq SINE Alu 1 179 -134 388 133 0 0 chr10 8404724 8404784 -131911981 - AluS SINE Alu -248 60 1 2275 78 10 0 chr10 8405387 8405681 -131911084 - AluY SINE Alu -14 297 1 2331 106 3 0 chr10 8405900 8406202 -131910563 + AluSx SINE Alu 1 303 -9 2228 105 0 3 chr10 8406388 8406683 -131910082 + AluSg SINE Alu 8 301 -9 993 172 0 22 chr10 8406704 8406884 -131909881 - L1MC1 LINE L1 -190 6126 5951 887 114 0 0 chr10 8406884 8406998 -131909767 - AluJo SINE Alu -20 292 179 823 183 8 0 chr10 8406997 8407128 -131909637 - AluJo SINE Alu -179 133 2 * 4100 153 3 16 chr10 8407130 8407823 -131908942 - L1MC1 LINE L1 -358 5958 5275 395 159 0 0 chr10 8408659 8408728 -131908037 - L1M LINE L1 -984 5343 5275 215 191 95 0 chr10 8409732 8409774 -131906991 + L2 LINE L2 3175 3220 -52 212 274 89 44 chr10 8409819 8409954 -131906811 - L2 LINE L2 -11 3302 3162 265 174 0 0 chr10 8410048 8410094 -131906671 - L1MC/D LINE L1 -1934 5851 5806 237 133 61 20 chr10 8410101 8410199 -131906566 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 507 252 35 0 chr10 8410476 8410591 -131906174 + LTR67 LTR ERVL 399 517 -40 2560 118 74 22 chr10 8412216 8412623 -131904142 - MSTA LTR MaLR 0 428 1 270 0 0 0 chr10 8413173 8413203 -131903562 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2142 111 40 7 chr10 8415051 8415349 -131901416 - AluSc SINE Alu -1 308 1 3887 76 38 0 chr10 8416694 8417194 -131899571 + L1PA13 LINE L1 5642 6160 -3 1112 257 40 81 chr10 8417274 8417457 -131899308 + L2 LINE L2 1997 2186 -1128 2186 131 0 0 chr10 8417457 8417755 -131899010 - AluSx SINE Alu -14 298 1 1112 257 40 81 chr10 8417755 8418042 -131898723 + L2 LINE L2 2186 2448 -866 959 276 99 14 chr10 8418045 8418397 -131898368 + L2 LINE L2 2238 2619 -695 1740 146 46 4 chr10 8418468 8418748 -131898017 - AluJb SINE Alu -20 292 1 478 319 13 4 chr10 8418773 8419005 -131897760 - L1MC1 LINE L1 -943 5186 4953 * 1218 288 59 48 chr10 8419001 8419640 -131897125 - L1MC1 LINE L1 -3270 2859 2225 2303 140 28 8 chr10 8419640 8419997 -131896768 - THE1B LTR MaLR 0 364 1 1218 288 59 48 chr10 8419997 8420195 -131896570 - L1MC1 LINE L1 -3904 2225 2031 935 254 68 66 chr10 8420450 8421460 -131895305 - L1MC1 LINE L1 -4646 1664 604 221 172 16 0 chr10 8421943 8422007 -131894758 + (TA)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr10 8422012 8422041 -131894724 + (TG)n Simple_repeat Simple_repeat 2 30 0 245 276 63 87 chr10 8422120 8422247 -131894518 - L2 LINE L2 -15 3257 3134 1816 168 3 3 chr10 8422264 8422556 -131894209 - AluJo SINE Alu -20 292 1 345 129 0 0 chr10 8422918 8422988 -131893777 + (TG)n Simple_repeat Simple_repeat 1 70 0 1152 247 57 46 chr10 8422988 8423377 -131893388 - MLT2C2 LTR ERVL -71 393 1 1054 164 0 23 chr10 8423638 8423809 -131892956 + AluJb SINE Alu 121 287 -25 213 39 0 0 chr10 8423814 8423840 -131892925 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 876 195 197 82 chr10 8423967 8424447 -131892318 + MLT1F1 LTR MaLR 1 565 -2 407 240 0 8 chr10 8424784 8424892 -131891873 + (CA)n Simple_repeat Simple_repeat 2 110 -11 1858 157 7 7 chr10 8424892 8425186 -131891579 - AluSx SINE Alu -18 294 1 407 240 0 8 chr10 8425186 8425198 -131891567 + (CA)n Simple_repeat Simple_repeat 110 121 0 219 295 66 0 chr10 8425215 8425276 -131891489 - MER91A DNA MER1_type -3 193 129 581 310 38 0 chr10 8425342 8425500 -131891265 - MER91A DNA MER1_type -20 176 13 1722 171 17 0 chr10 8427344 8427637 -131889128 + AluJo SINE Alu 1 298 -14 2000 155 0 10 chr10 8427697 8428007 -131888758 - AluSx SINE Alu -5 307 1 180 77 0 0 chr10 8428033 8428059 -131888706 + (CA)n Simple_repeat Simple_repeat 1 26 0 1850 167 0 7 chr10 8428934 8429234 -131887531 + AluJo SINE Alu 1 298 -14 2178 124 0 0 chr10 8429373 8429672 -131887093 - AluSq SINE Alu -14 299 1 1592 170 12 8 chr10 8429759 8430018 -131886747 - AluJo SINE Alu -52 260 1 198 0 0 0 chr10 8430203 8430225 -131886540 + (TA)n Simple_repeat Simple_repeat 2 23 0 1926 137 0 14 chr10 8430874 8431158 -131885607 + AluSc SINE Alu 1 280 -29 317 361 16 0 chr10 8431337 8431459 -131885306 - MIR3 SINE MIR -38 170 47 1995 92 8 0 chr10 8431619 8431881 -131884884 - L1PA10 LINE L1 -12 6156 5893 5163 71 3 3 chr10 8432204 8432836 -131883929 - L1PA10 LINE L1 -12 6156 5525 350 308 47 35 chr10 8434357 8434529 -131882236 + MIR3 SINE MIR 17 190 -18 290 292 10 10 chr10 8434983 8435079 -131881686 + MER103 DNA DNA 37 132 -34 331 266 105 21 chr10 8435163 8435306 -131881459 + L1M4 LINE L1 5075 5229 -917 361 296 108 11 chr10 8436903 8437079 -131879686 - MIR SINE MIR -23 239 47 2090 94 0 4 chr10 8437084 8437351 -131879414 + AluSx SINE Alu 36 301 -11 340 318 162 1 chr10 8437669 8437828 -131878937 - MIR SINE MIR -70 138 14 248 216 20 0 chr10 8437826 8437877 -131878888 + L2 LINE L2 3262 3313 0 * 1753 179 7 0 chr10 8437917 8438208 -131878557 - AluSx SINE Alu -18 294 2 1901 154 0 7 chr10 8438277 8438575 -131878190 + AluJo SINE Alu 17 312 0 1527 190 30 23 chr10 8439213 8439518 -131877247 - AluJb SINE Alu -5 307 1 258 347 24 45 chr10 8440168 8440312 -131876453 + MIR3 SINE MIR 40 181 -27 253 182 23 0 chr10 8440395 8440439 -131876326 - MER57A LTR ERV1 -64 339 295 216 348 90 23 chr10 8440852 8441151 -131875614 - L2 LINE L2 -340 2974 2656 1066 145 60 20 chr10 8441155 8441188 -131875577 + AluSg/x SINE Alu 86 116 -193 1884 84 0 8 chr10 8441188 8441453 -131875312 + AluSq SINE Alu 51 313 0 1066 145 60 20 chr10 8441453 8441618 -131875147 + AluSg/x SINE Alu 116 293 -16 381 328 85 48 chr10 8441724 8442017 -131874748 - L2 LINE L2 -862 2452 2149 220 312 50 50 chr10 8442380 8442521 -131874244 - L2 LINE L2 -1635 1679 1539 1422 168 45 63 chr10 8442622 8442961 -131873804 + AluJb SINE Alu 1 334 0 743 144 0 0 chr10 8443149 8443253 -131873512 + FRAM SINE Alu 49 152 -24 209 338 54 0 chr10 8443267 8443341 -131873424 - L2 LINE L2 -2 3311 3234 334 321 3 8 chr10 8443473 8443594 -131873171 + MIR SINE MIR 51 170 -62 1956 133 85 20 chr10 8443616 8443968 -131872797 + THE1C LTR MaLR 1 375 0 195 139 0 0 chr10 8444288 8444324 -131872441 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1786 187 0 13 chr10 8444429 8444745 -131872020 + AluJo SINE Alu 1 312 0 497 272 69 13 chr10 8444909 8445127 -131871638 - MIR SINE MIR -13 249 19 1691 120 0 154 chr10 8445216 8445573 -131871192 - AluJb SINE Alu -10 302 1 757 229 67 48 chr10 8445675 8445989 -131870776 + L1MC5 LINE L1 7631 7950 -11 324 336 49 8 chr10 8446171 8446293 -131870472 + MIR3 SINE MIR 74 200 -8 1729 142 26 8 chr10 8447094 8447391 -131869374 + AluJo SINE Alu 12 313 0 1109 159 17 0 chr10 8447787 8447963 -131868802 - AluJ SINE Alu 0 312 134 2077 118 4 0 chr10 8447963 8448243 -131868522 - AluSx SINE Alu -13 299 19 1824 112 20 58 chr10 8448477 8448798 -131867967 - AluSx SINE Alu 0 310 1 318 167 0 0 chr10 8448816 8448876 -131867889 + CT-rich Low_complexity Low_complexity 2 61 0 904 153 8 0 chr10 8448876 8449007 -131867758 - AluJ SINE Alu -169 133 2 1488 171 3 49 chr10 8449402 8449688 -131867077 - AluJb SINE Alu -39 273 1 26 30 0 0 chr10 8449695 8449728 -131867037 + AT_rich Low_complexity Low_complexity 1 33 0 833 163 8 0 chr10 8449730 8449853 -131866912 - FLAM_C SINE Alu -18 125 2 853 299 68 35 chr10 8449998 8450516 -131866249 + L1ME4a LINE L1 5392 5926 -195 2034 136 7 3 chr10 8450641 8450935 -131865830 + AluSx SINE Alu 1 295 -17 2363 96 3 0 chr10 8451014 8451317 -131865448 + AluSp SINE Alu 1 304 -9 204 274 71 12 chr10 8451596 8451680 -131865085 - MIR SINE MIR -111 151 63 491 164 4 246 chr10 8452198 8452286 -131864479 - MER5A DNA MER1_type -13 176 176 1991 101 19 0 chr10 8452286 8452554 -131864211 - AluSx SINE Alu -18 294 22 491 164 4 246 chr10 8452554 8452697 -131864068 - MER5A DNA MER1_type -12 177 1 211 85 43 0 chr10 8453068 8453115 -131863650 + (TA)n Simple_repeat Simple_repeat 2 50 0 25 0 0 0 chr10 8453115 8453140 -131863625 + AT_rich Low_complexity Low_complexity 1 25 0 204 314 0 0 chr10 8453520 8453571 -131863194 + L3 LINE CR1 1516 1566 -11 2193 109 0 3 chr10 8453630 8453924 -131862841 + AluSq SINE Alu 5 297 -16 21 0 0 0 chr10 8454145 8454166 -131862599 + AT_rich Low_complexity Low_complexity 1 21 0 4698 123 11 32 chr10 8454546 8454804 -131861961 - L1PB4 LINE L1 0 6156 5894 2102 133 0 0 chr10 8454804 8455098 -131861667 - AluY SINE Alu -17 294 1 4698 123 11 32 chr10 8455098 8455621 -131861144 - L1PB4 LINE L1 -262 5894 5391 260 307 23 0 chr10 8456039 8456127 -131860638 + GA-rich Low_complexity Low_complexity 1 90 0 22 0 0 0 chr10 8456550 8456572 -131860193 + AT_rich Low_complexity Low_complexity 1 22 0 1603 205 0 7 chr10 8456688 8456990 -131859775 + AluJo SINE Alu 2 301 -11 1975 137 13 10 chr10 8457861 8458168 -131858597 + AluSx SINE Alu 5 312 0 222 218 0 0 chr10 8458193 8458248 -131858517 + A-rich Low_complexity Low_complexity 1 55 0 766 156 0 71 chr10 8458544 8458685 -131858080 + FLAM_C SINE Alu 1 131 -2 1337 198 41 36 chr10 8458742 8459191 -131857574 - Charlie1b DNA MER1_type 0 523 1 2449 88 0 0 chr10 8459972 8460277 -131856488 - AluSc SINE Alu -4 305 1 287 318 86 75 chr10 8460643 8460923 -131855842 - L2 LINE L2 -5 3267 2985 446 279 89 26 chr10 8460990 8461180 -131855585 - MLT1K LTR MaLR -9 579 378 875 201 0 0 chr10 8463015 8463164 -131853601 - FRAM SINE Alu -26 150 2 624 266 110 17 chr10 8463168 8463405 -131853360 + MER112 DNA MER1_type 1 259 -1 1197 147 0 26 chr10 8464114 8464304 -131852461 + AluJo SINE Alu 84 268 -44 240 287 50 88 chr10 8464511 8464605 -131852160 + MLT1L LTR MaLR 367 452 -163 1712 181 0 10 chr10 8464605 8464898 -131851867 + AluJo SINE Alu 5 294 -18 240 287 50 88 chr10 8464898 8464984 -131851781 + MLT1L LTR MaLR 452 540 -75 483 173 0 0 chr10 8465009 8465119 -131851646 + CT-rich Low_complexity Low_complexity 2 111 0 1847 126 69 0 chr10 8465119 8465381 -131851384 - AluSx SINE Alu -32 280 1 1969 155 7 3 chr10 8465915 8466225 -131850540 - AluJo SINE Alu -1 311 1 823 174 83 53 chr10 8466456 8466603 -131850162 - MER33 DNA MER1_type -2261 324 163 1832 166 0 4 chr10 8466603 8466903 -131849862 + AluSx SINE Alu 9 307 0 823 174 83 53 chr10 8466903 8467018 -131849747 - MER33 DNA MER1_type -2422 163 53 281 85 34 0 chr10 8467356 8467591 -131849174 + CT-rich Low_complexity Low_complexity 1 180 0 1945 157 3 25 chr10 8467591 8467910 -131848855 - AluSq SINE Alu 0 547 1 213 232 189 63 chr10 8467922 8468017 -131848748 + MIR SINE MIR 74 180 -82 186 233 123 55 chr10 8468045 8468118 -131848647 + L2 LINE L2 3129 3206 -66 909 46 0 0 chr10 8468966 8469074 -131847691 + L1MA1 LINE L1 6195 6302 0 189 0 81 27 chr10 8469122 8469159 -131847606 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3135 60 34 0 chr10 8469159 8469540 -131847225 - L1PA8 LINE L1 -17 6155 5762 907 142 7 13 chr10 8469547 8469702 -131847063 + L1MA9 LINE L1 6159 6312 0 364 268 121 19 chr10 8470309 8470466 -131846299 - MIR SINE MIR -67 195 23 272 293 24 12 chr10 8470604 8470686 -131846079 + L2 LINE L2 3227 3309 -4 1611 183 23 17 chr10 8470694 8470994 -131845771 + AluJb SINE Alu 11 312 0 217 163 23 0 chr10 8471400 8471443 -131845322 + A-rich Low_complexity Low_complexity 5 48 0 1761 203 7 0 chr10 8471662 8471972 -131844793 + AluJo SINE Alu 1 312 0 2181 124 0 3 chr10 8472223 8472530 -131844235 + AluSq SINE Alu 1 306 -7 285 262 39 29 chr10 8472820 8472923 -131843842 + MIR SINE MIR 73 176 -86 209 270 108 14 chr10 8473021 8473095 -131843670 + MIR SINE MIR 178 258 -4 1627 145 16 4 chr10 8473477 8473732 -131843033 - AluJo SINE Alu -15 297 40 2212 124 0 10 chr10 8474151 8474458 -131842307 - AluSx SINE Alu -8 304 1 357 43 0 0 chr10 8475179 8475226 -131841539 + (CA)n Simple_repeat Simple_repeat 1 47 0 1799 187 0 13 chr10 8477192 8477507 -131839258 - AluJo SINE Alu -1 311 1 353 266 19 19 chr10 8478617 8478778 -131837987 - MIR SINE MIR -63 145 8 220 214 71 18 chr10 8478936 8478992 -131837773 - MIR SINE MIR -96 166 108 2131 139 0 0 chr10 8479247 8479541 -131837224 + AluSx SINE Alu 1 294 -18 868 172 0 0 chr10 8479706 8479834 -131836931 - FLAM_A SINE Alu -5 128 1 1724 179 3 13 chr10 8480973 8481286 -131835479 + AluJo SINE Alu 1 310 -2 1942 173 0 3 chr10 8481320 8481632 -131835133 + AluSx SINE Alu 1 311 -1 534 298 41 1 chr10 8481655 8481824 -131834941 - MIR SINE MIR -31 177 46 230 311 56 0 chr10 8481859 8481949 -131834816 + MIR SINE MIR 168 262 0 23 68 0 0 chr10 8482045 8482089 -131834676 + AT_rich Low_complexity Low_complexity 1 44 0 843 127 8 8 chr10 8482089 8482207 -131834558 - FLAM_C SINE Alu -15 118 1 2247 108 3 0 chr10 8483925 8484230 -131832535 + AluSg1 SINE Alu 1 306 -3 318 328 88 37 chr10 8486641 8487049 -131829716 - L2 LINE L2 -8 3264 2836 268 291 12 0 chr10 8487049 8487135 -131829630 + (CGGGG)n Simple_repeat Simple_repeat 4 90 0 21 36 0 0 chr10 8487485 8487513 -131829252 + AT_rich Low_complexity Low_complexity 1 28 0 342 295 45 0 chr10 8487541 8487653 -131829112 - MIR SINE MIR 0 262 146 1778 170 10 10 chr10 8487694 8487994 -131828771 - AluJo SINE Alu -12 300 1 22 0 0 0 chr10 8489448 8489470 -131827295 + AT_rich Low_complexity Low_complexity 1 22 0 562 223 69 23 chr10 8489701 8489876 -131826889 + MIR SINE MIR 34 216 -46 240 292 167 0 chr10 8490771 8490843 -131825922 + MER5A DNA MER1_type 2 85 -104 1893 143 7 0 chr10 8491286 8491566 -131825199 - AluJo SINE Alu -26 286 5 217 318 16 16 chr10 8492436 8492499 -131824266 - MIR SINE MIR -116 146 84 965 196 4 94 chr10 8492590 8492825 -131823940 - MER20 DNA MER1_type -4 215 2 702 167 25 8 chr10 8492940 8493060 -131823705 + FLAM_A SINE Alu 2 123 -10 345 309 12 0 chr10 8494136 8494298 -131822467 + (TA)n Simple_repeat Simple_repeat 2 165 0 302 313 0 0 chr10 8494306 8494389 -131822376 + L1MC4 LINE L1 6614 6696 -1346 803 143 0 8 chr10 8494389 8494508 -131822257 - FLAM_C SINE Alu -24 119 2 1988 228 49 62 chr10 8494628 8495255 -131821510 - L1ME1 LINE L1 -6 6160 5542 1977 117 46 0 chr10 8495848 8496131 -131820634 - AluSx SINE Alu -15 297 2 188 67 33 0 chr10 8496619 8496649 -131820116 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 915 180 25 0 chr10 8497172 8497333 -131819432 - MER5A DNA MER1_type -24 165 1 260 286 8 92 chr10 8497380 8497436 -131819329 - MIR3 SINE MIR 0 208 166 1193 187 22 40 chr10 8497436 8497661 -131819104 - MER58A DNA MER1_type 0 224 4 260 286 8 92 chr10 8497661 8497723 -131819042 - MIR3 SINE MIR -42 166 100 1191 216 69 79 chr10 8497825 8497838 -131818927 - MLT1F1 LTR MaLR 0 559 547 2378 150 8 35 chr10 8497838 8498239 -131818526 - MLT1B LTR MaLR 0 390 1 1191 216 69 79 chr10 8498239 8498766 -131817999 - MLT1F1 LTR MaLR -12 547 6 717 148 10 0 chr10 8498956 8499057 -131817708 + L1PB4 LINE L1 6039 6140 -16 23 54 0 0 chr10 8499583 8499620 -131817145 + AT_rich Low_complexity Low_complexity 1 37 0 1166 137 103 29 chr10 8499672 8499876 -131816889 + MER20 DNA MER1_type 1 219 0 294 247 132 63 chr10 8500267 8500416 -131816349 - L1ME4a LINE L1 -9 6112 5946 1711 221 152 47 chr10 8500416 8500954 -131815811 + MLT1G1 LTR MaLR 1 595 0 294 247 132 63 chr10 8500954 8500994 -131815771 - L1ME4a LINE L1 -175 5946 5910 290 254 119 51 chr10 8501756 8501874 -131814891 - L2 LINE L2 -1 3312 3187 395 299 160 0 chr10 8502126 8502270 -131814495 + MIR3 SINE MIR 36 202 -6 213 212 53 0 chr10 8502648 8502761 -131814004 + (TA)n Simple_repeat Simple_repeat 1 119 0 255 175 0 0 chr10 8503130 8503187 -131813578 + (TA)n Simple_repeat Simple_repeat 2 58 0 1541 185 58 102 chr10 8503982 8504463 -131812302 + MLT2C2 LTR ERVL 1 460 -4 248 200 31 31 chr10 8504885 8504950 -131811815 + L2 LINE L2 3249 3313 0 490 113 0 72 chr10 8505489 8505683 -131811082 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 208 0 0 chr10 8505685 8505738 -131811027 + GA-rich Low_complexity Low_complexity 1 53 0 1161 68 17 11 chr10 8506403 8506580 -131810185 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 480 208 94 0 chr10 8508480 8508586 -131808179 + MER5A DNA MER1_type 74 189 0 1522 196 0 7 chr10 8508694 8508964 -131807801 - AluJb SINE Alu -44 268 1 700 212 26 36 chr10 8509026 8509219 -131807546 - MLT1J LTR MaLR 0 511 321 875 220 49 52 chr10 8509229 8509677 -131807088 - MLT1D LTR MaLR -6 499 26 679 273 89 25 chr10 8509692 8510018 -131806747 - MLT1J LTR MaLR -164 347 1 1825 158 27 3 chr10 8510225 8510517 -131806248 - AluJo SINE Alu -13 299 1 216 0 0 0 chr10 8510898 8510922 -131805843 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 199 143 29 0 chr10 8511465 8511500 -131805265 - MIR SINE MIR -65 197 162 354 271 69 7 chr10 8512296 8512440 -131804325 - L1ME4a LINE L1 -1 6120 5968 183 271 21 21 chr10 8512618 8512666 -131804099 + L2 LINE L2 3213 3260 -12 396 339 23 28 chr10 8512772 8512949 -131803816 - MIR SINE MIR -74 188 13 4283 127 30 6 chr10 8513433 8514073 -131802692 + L1PA16 LINE L1 5503 6157 -9 300 210 0 0 chr10 8514074 8514155 -131802610 + (TA)n Simple_repeat Simple_repeat 2 82 0 316 292 11 0 chr10 8514155 8514244 -131802521 + L1MC4 LINE L1 6614 6703 -1339 2078 125 7 0 chr10 8514890 8515179 -131801586 + AluSp SINE Alu 14 304 -9 851 263 50 118 chr10 8515683 8516219 -131800546 + L2 LINE L2 2813 3312 -1 21 0 0 0 chr10 8517011 8517032 -131799733 + AT_rich Low_complexity Low_complexity 1 21 0 1819 173 69 0 chr10 8518338 8518673 -131798092 - MER47A DNA MER2_type -1 365 8 2004 125 7 14 chr10 8518896 8519192 -131797573 + AluSx SINE Alu 1 294 -18 310 267 149 37 chr10 8519503 8519664 -131797101 + L2 LINE L2 3122 3300 -13 487 107 82 2 chr10 8519668 8520155 -131796610 + (TA)n Simple_repeat Simple_repeat 1 526 0 34 24 0 0 chr10 8520155 8520196 -131796569 + AT_rich Low_complexity Low_complexity 1 41 0 360 106 93 0 chr10 8520202 8520363 -131796402 + (TA)n Simple_repeat Simple_repeat 1 176 0 37 52 0 0 chr10 8520363 8520421 -131796344 + AT_rich Low_complexity Low_complexity 1 58 0 235 306 294 8 chr10 8522248 8522493 -131794272 + L3 LINE CR1 1138 1452 -125 263 300 130 63 chr10 8522534 8522881 -131793884 - L2 LINE L2 -36 3236 2867 810 179 0 15 chr10 8523273 8523407 -131793358 - AluJb SINE Alu -179 133 2 22 70 0 0 chr10 8523961 8524004 -131792761 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr10 8524048 8524094 -131792671 + AT_rich Low_complexity Low_complexity 1 46 0 1882 141 21 3 chr10 8524714 8524998 -131791767 + AluJb SINE Alu 1 289 -23 840 117 54 7 chr10 8524998 8525719 -131791046 + (TA)n Simple_repeat Simple_repeat 1 754 0 528 141 0 116 chr10 8525855 8525908 -131790857 - MER33 DNA MER1_type -2476 109 76 2162 127 0 0 chr10 8525908 8526208 -131790557 - AluSx SINE Alu -12 300 1 528 141 0 116 chr10 8526208 8526275 -131790490 - MER33 DNA MER1_type -2509 76 3 1191 26 28 26 chr10 8527545 8527787 -131788978 + (TTTC)n Simple_repeat Simple_repeat 2 423 0 1091 173 0 11 chr10 8527791 8527976 -131788789 - AluSq SINE Alu -13 300 118 760 132 7 44 chr10 8528081 8528217 -131788548 - LTR9 LTR ERV1 -481 131 1 383 259 175 21 chr10 8529822 8529965 -131786800 - MIR3 SINE MIR -27 181 17 489 130 13 0 chr10 8530147 8530224 -131786541 + MADE1 DNA Mariner 3 80 0 2203 110 0 0 chr10 8530290 8530581 -131786184 - AluSq SINE Alu -18 295 5 551 319 40 22 chr10 8531170 8531396 -131785369 - MIR SINE MIR 0 262 33 936 216 0 55 chr10 8531453 8531671 -131785094 + MER3 DNA MER1_type 2 207 -2 405 176 28 9 chr10 8531811 8531919 -131784846 + GA-rich Low_complexity Low_complexity 4 113 0 2281 108 7 0 chr10 8532135 8532440 -131784325 + AluSx SINE Alu 1 307 -5 214 356 67 0 chr10 8532641 8532731 -131784034 - MIR3 SINE MIR -24 184 89 304 276 243 17 chr10 8534614 8534795 -131781970 + MIR SINE MIR 4 225 -37 234 91 0 0 chr10 8536126 8536159 -131780606 + (T)n Simple_repeat Simple_repeat 1 33 0 445 274 9 9 chr10 8536558 8536664 -131780101 + L2 LINE L2 3208 3313 0 5777 22 5 2 chr10 8537672 8538308 -131778457 + L1PA4 LINE L1 5516 6153 -2 207 167 0 0 chr10 8538631 8538667 -131778098 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2413 76 0 16 chr10 8539104 8539420 -131777345 + AluSx SINE Alu 1 311 -1 185 250 50 75 chr10 8540026 8540106 -131776659 + MIR SINE MIR 65 142 -66 453 81 0 0 chr10 8542100 8542162 -131774603 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 967 272 25 0 chr10 8543258 8543501 -131773264 - MIR SINE MIR -11 251 3 660 249 83 50 chr10 8543956 8544197 -131772568 - MIR SINE MIR -10 252 4 3373 170 45 5 chr10 8544329 8545006 -131771759 - MER39 LTR ERV1 -3 639 1 27 62 0 0 chr10 8545519 8545567 -131771198 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr10 8545655 8545678 -131771087 + AT_rich Low_complexity Low_complexity 1 23 0 198 293 183 0 chr10 8545738 8545820 -131770945 - MER5C DNA MER1_type 0 324 228 181 156 0 0 chr10 8545833 8545865 -131770900 - MER5C DNA MER1_type -201 123 92 242 307 0 13 chr10 8546460 8546535 -131770230 + L1ME LINE L1 5582 5655 -466 304 269 182 50 chr10 8546965 8547207 -131769558 + LTR33A LTR ERVL 229 502 -21 302 225 12 0 chr10 8547209 8547289 -131769476 + CT-rich Low_complexity Low_complexity 1 81 0 474 198 32 0 chr10 8547326 8547452 -131769313 + CT-rich Low_complexity Low_complexity 2 131 0 1159 238 13 36 chr10 8547802 8548104 -131768661 + MLT1F LTR MaLR 43 337 -205 1864 171 50 26 chr10 8548131 8548510 -131768255 - MER39 LTR ERV1 -1 706 319 555 56 0 0 chr10 8548757 8548828 -131767937 + (TTCC)n Simple_repeat Simple_repeat 4 74 0 360 235 35 0 chr10 8548856 8548941 -131767824 - MER39B LTR ERV1 -311 342 255 225 0 0 0 chr10 8548956 8548981 -131767784 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 186 71 0 0 chr10 8549023 8549051 -131767714 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 691 127 24 0 chr10 8549052 8549178 -131767587 + CT-rich Low_complexity Low_complexity 4 132 0 228 100 0 0 chr10 8549179 8549219 -131767546 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1775 185 7 0 chr10 8549230 8549522 -131767243 - AluJb SINE Alu -16 296 3 1652 132 87 3 chr10 8549523 8549811 -131766954 - MER39 LTR ERV1 -394 313 2 576 214 7 62 chr10 8549811 8549947 -131766818 + MLT1F LTR MaLR 405 532 -35 888 106 159 33 chr10 8550102 8550253 -131766512 - AluSg/x SINE Alu -7 303 134 2443 73 0 0 chr10 8552249 8552551 -131764214 - AluY SINE Alu -9 302 1 245 341 79 5 chr10 8554438 8554620 -131762145 + MIR3 SINE MIR 12 207 -1 1367 173 11 50 chr10 8555545 8555938 -131760827 - AluJo SINE Alu 0 419 38 1578 270 110 33 chr10 8555985 8556601 -131760164 + HAL1 LINE L1 1629 2323 -184 877 172 0 8 chr10 8556601 8556735 -131760030 + FLAM_C SINE Alu 1 133 0 1578 270 110 33 chr10 8556735 8556929 -131759836 + HAL1 LINE L1 2323 2501 -6 298 238 148 10 chr10 8557303 8557404 -131759361 + L2 LINE L2 3199 3313 0 331 362 65 0 chr10 8557471 8557703 -131759062 + L2 LINE L2 2638 2884 -430 372 164 0 0 chr10 8558231 8558298 -131758467 + (CA)n Simple_repeat Simple_repeat 1 67 0 337 260 182 39 chr10 8559402 8559556 -131757209 - MIR SINE MIR -86 176 1 310 321 21 86 chr10 8559625 8559671 -131757094 + L2 LINE L2 3142 3189 -83 2142 130 0 3 chr10 8559671 8559972 -131756793 + AluSx SINE Alu 1 300 -12 310 321 21 86 chr10 8559972 8560065 -131756700 + L2 LINE L2 3189 3272 0 538 257 39 56 chr10 8560933 8561112 -131755653 - MIR3 SINE MIR -32 176 1 28 86 0 0 chr10 8561264 8561334 -131755431 + AT_rich Low_complexity Low_complexity 1 70 0 1993 129 0 4 chr10 8561620 8561900 -131754865 + AluSx SINE Alu 1 279 -33 23 0 0 0 chr10 8561940 8561963 -131754802 + AT_rich Low_complexity Low_complexity 1 23 0 819 252 166 19 chr10 8561965 8562326 -131754439 + MLT1J LTR MaLR 98 511 0 282 56 0 0 chr10 8563470 8563506 -131753259 + (TG)n Simple_repeat Simple_repeat 2 37 0 223 265 0 0 chr10 8565118 8565167 -131751598 + (CA)n Simple_repeat Simple_repeat 2 50 0 1963 139 137 11 chr10 8568226 8568606 -131748159 - MSTA LTR MaLR 0 428 1 1782 153 14 14 chr10 8568950 8569262 -131747503 - AluJo SINE Alu 0 312 1 516 206 28 153 chr10 8569416 8569742 -131747023 - L1M4 LINE L1 -1484 4662 4378 428 267 121 11 chr10 8569777 8570050 -131746715 - L1M4 LINE L1 -2465 3681 3379 3673 32 0 0 chr10 8570059 8570494 -131746271 - L1PA3 LINE L1 -5 6150 5716 243 278 156 18 chr10 8571249 8571363 -131745402 - MIR SINE MIR -41 167 35 2026 133 30 0 chr10 8571670 8571971 -131744794 - AluSx SINE Alu -2 310 1 1254 136 166 2 chr10 8572222 8572650 -131744115 - L1PA13 LINE L1 -11 6152 5658 201 333 100 33 chr10 8572785 8572905 -131743860 + L2 LINE L2 3136 3263 -9 363 44 0 0 chr10 8577126 8577171 -131739594 + (CA)n Simple_repeat Simple_repeat 1 45 0 1772 184 0 16 chr10 8579133 8579449 -131737316 - AluJo SINE Alu 0 312 2 181 338 75 12 chr10 8580926 8581006 -131735759 - MIR SINE MIR -163 99 15 365 243 68 79 chr10 8581043 8581220 -131735545 + MIR SINE MIR 33 207 -55 252 0 0 0 chr10 8582176 8582204 -131734561 + (TG)n Simple_repeat Simple_repeat 2 29 0 78 0 0 0 chr10 8582204 8582282 -131734483 + AT_rich Low_complexity Low_complexity 1 78 0 319 236 47 39 chr10 8582282 8582409 -131734356 - L1M4 LINE L1 -2912 3234 3107 52 0 0 0 chr10 8582418 8582470 -131734295 + AT_rich Low_complexity Low_complexity 1 52 0 260 177 35 35 chr10 8582470 8582583 -131734182 + (TATAA)n Simple_repeat Simple_repeat 1 113 0 198 91 55 18 chr10 8582588 8582643 -131734122 + A-rich Low_complexity Low_complexity 2 58 0 296 300 76 57 chr10 8582767 8582977 -131733788 - L2 LINE L2 -3071 243 30 3801 161 85 5 chr10 8584504 8584623 -131732142 - L1MA10 LINE L1 -39 6295 6187 465 19 0 0 chr10 8584623 8584677 -131732088 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3801 161 85 5 chr10 8584677 8585310 -131731455 - L1MA10 LINE L1 -147 6187 5483 1834 117 12 4 chr10 8585360 8585609 -131731156 + AluSc SINE Alu 7 257 -52 1087 248 193 39 chr10 8585713 8586230 -131730535 - L2 LINE L2 -2482 832 236 2167 103 6 13 chr10 8586230 8586542 -131730223 + AluSg SINE Alu 1 310 0 420 37 0 0 chr10 8587481 8587535 -131729230 + (CA)n Simple_repeat Simple_repeat 2 55 0 346 188 21 21 chr10 8588342 8588438 -131728327 + CT-rich Low_complexity Low_complexity 1 96 0 261 139 0 0 chr10 8588431 8588474 -131728291 + (TCTCC)n Simple_repeat Simple_repeat 1 43 0 * 391 273 327 0 chr10 8588606 8588771 -131727994 - MIR SINE MIR -26 236 18 319 282 129 29 chr10 8589021 8589191 -131727574 - MIR SINE MIR -45 217 31 1368 143 0 66 chr10 8589605 8589849 -131726916 + AluJo SINE Alu 40 267 -45 217 216 0 0 chr10 8589998 8590035 -131726730 + polypyrimidine Low_complexity Low_complexity 3 39 0 377 182 20 27 chr10 8590042 8590190 -131726575 + (TA)n Simple_repeat Simple_repeat 2 148 0 25 0 0 0 chr10 8590356 8590381 -131726384 + AT_rich Low_complexity Low_complexity 1 25 0 1283 141 13 0 chr10 8590850 8591077 -131725688 - L1MB1 LINE L1 -34 6155 5926 473 145 0 0 chr10 8591078 8591161 -131725604 + L1M3 LINE L1 5570 5652 -516 2592 43 0 0 chr10 8591549 8591852 -131724913 + AluY SINE Alu 2 304 -7 575 259 25 37 chr10 8592372 8592534 -131724231 + MIR3 SINE MIR 46 205 -3 215 143 0 18 chr10 8592758 8592814 -131723951 + (TA)n Simple_repeat Simple_repeat 2 56 0 2249 98 3 0 chr10 8592814 8593099 -131723666 - AluSp SINE Alu -27 286 1 206 275 110 0 chr10 8593872 8593963 -131722802 + MIR SINE MIR 118 218 -44 868 312 83 67 chr10 8594094 8594838 -131721927 + L2 LINE L2 1174 1929 -1385 710 338 115 16 chr10 8594855 8594982 -131721783 + L2 LINE L2 2304 2417 -897 2415 149 14 41 chr10 8594982 8595418 -131721347 - MSTB LTR MaLR -2 424 1 710 338 115 16 chr10 8595418 8595716 -131721049 + L2 LINE L2 2417 2771 -543 375 329 126 11 chr10 8596186 8596463 -131720302 + MLT1J2 LTR MaLR 64 372 -78 532 250 0 8 chr10 8596530 8596654 -131720111 + MER58B DNA MER1_type 219 341 0 242 396 139 0 chr10 8596788 8596932 -131719833 - L2 LINE L2 -5 3267 3104 1200 254 86 17 chr10 8597004 8597410 -131719355 - LTR16A LTR ERVL 0 450 17 214 342 5 86 chr10 8597420 8597607 -131719158 - L2 LINE L2 -210 3062 2891 1014 128 41 0 chr10 8598302 8598474 -131718291 - THE1C LTR MaLR 0 375 197 254 210 16 0 chr10 8598540 8598620 -131718145 + (TATTG)n Simple_repeat Simple_repeat 1 81 0 2175 128 3 13 chr10 8599135 8599447 -131717318 - AluSx SINE Alu -3 309 1 411 303 96 28 chr10 8599541 8599719 -131717046 - L3b LINE CR1 -118 1465 1276 4683 50 0 3 chr10 8601243 8601823 -131714942 - L1PA5 LINE L1 -1 6153 5576 203 255 43 128 chr10 8601948 8602089 -131714676 - L2 LINE L2 -217 3055 2927 729 141 62 23 chr10 8602338 8602466 -131714299 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 8604348 8604369 -131712396 + AT_rich Low_complexity Low_complexity 1 21 0 2487 61 0 0 chr10 8604748 8605041 -131711724 + AluY SINE Alu 3 295 -16 2422 97 0 0 chr10 8605333 8605644 -131711121 + AluSx SINE Alu 1 311 -1 646 322 19 14 chr10 8608446 8608657 -131708108 + MIR SINE MIR 3 214 -48 1577 226 7 0 chr10 8608729 8609079 -131707686 - AluJo SINE Alu 0 352 1 206 231 115 26 chr10 8609082 8609160 -131707605 + L2 LINE L2 3188 3272 0 864 128 0 14 chr10 8610124 8610312 -131706453 + (TTCC)n Simple_repeat Simple_repeat 1 185 0 200 108 0 27 chr10 8610396 8610433 -131706332 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 186 229 16 66 chr10 8610495 8610556 -131706209 - L2 LINE L2 0 3313 3256 230 236 0 18 chr10 8611481 8611536 -131705229 + (TG)n Simple_repeat Simple_repeat 1 54 0 2517 153 9 24 chr10 8612686 8613111 -131703654 + MSTA LTR MaLR 1 419 -9 339 117 0 7 chr10 8613213 8613464 -131703301 + AluSg1 SINE Alu 1 325 0 566 49 12 0 chr10 8614739 8614821 -131701944 + (CA)n Simple_repeat Simple_repeat 2 84 0 684 206 55 7 chr10 8615801 8615947 -131700818 - MER105 DNA DNA -1 203 51 879 15 2 92 chr10 8616338 8616817 -131699948 + (TA)n Simple_repeat Simple_repeat 1 436 0 235 61 61 51 chr10 8616802 8616900 -131699865 + (CATAT)n Simple_repeat Simple_repeat 2 100 0 * 1787 138 35 21 chr10 8619925 8620214 -131696551 + AluSx SINE Alu 1 293 -19 218 225 0 0 chr10 8620502 8620542 -131696223 + MIR SINE MIR 40 79 -129 267 299 63 67 chr10 8620720 8620974 -131695791 - L2 LINE L2 -341 2973 2721 566 135 101 0 chr10 8621561 8621682 -131695083 + AluJb SINE Alu 187 316 0 287 243 92 25 chr10 8621780 8621902 -131694863 - MIR SINE MIR -63 145 38 430 267 35 26 chr10 8622427 8622543 -131694222 + MIR SINE MIR 3 119 -143 428 282 18 9 chr10 8622598 8622708 -131694057 - L2 LINE L2 -10 3303 3193 994 181 5 29 chr10 8622869 8623073 -131693692 + Charlie5 DNA MER1_type 2 200 -2412 * 1085 193 59 15 chr10 8623059 8623329 -131693436 + Charlie5 DNA MER1_type 2343 2624 0 309 242 68 37 chr10 8624486 8624599 -131692166 - MIR SINE MIR -81 127 11 1380 179 33 22 chr10 8624673 8624997 -131691768 + AluJo SINE Alu 34 312 0 201 265 137 49 chr10 8626291 8626393 -131690372 + L2 LINE L2 3162 3272 0 1843 166 31 0 chr10 8627371 8627661 -131689104 + AluJb SINE Alu 5 303 -9 236 270 113 26 chr10 8628765 8628880 -131687885 + L2 LINE L2 3182 3306 -7 850 248 41 37 chr10 8630644 8630886 -131685879 + MIR SINE MIR 1 243 -19 277 223 136 10 chr10 8631006 8631109 -131685656 - MER103 DNA DNA -47 119 4 247 284 55 37 chr10 8632231 8632261 -131684504 + MIR3 SINE MIR 71 99 -109 1961 145 0 31 chr10 8632261 8632579 -131684186 - AluJo SINE Alu -4 308 1 247 284 55 37 chr10 8632579 8632657 -131684108 + MIR3 SINE MIR 99 181 -27 215 197 0 45 chr10 8633680 8633746 -131683019 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1737 158 7 34 chr10 8633867 8634165 -131682600 - AluJo SINE Alu -22 290 1 2128 113 13 10 chr10 8634656 8634965 -131681800 + AluSx SINE Alu 1 310 -2 819 153 8 0 chr10 8635043 8635174 -131681591 - FLAM_C SINE Alu 0 143 12 44 20 0 0 chr10 8635257 8635308 -131681457 + AT_rich Low_complexity Low_complexity 1 51 0 251 277 98 103 chr10 8635320 8635751 -131681014 - L2 LINE L2 -6 3307 2875 3925 142 89 8 chr10 8635751 8636405 -131680360 - MER39 LTR ERV1 0 707 1 251 277 98 103 chr10 8636405 8636556 -131680209 - L2 LINE L2 -438 2875 2725 1872 153 24 0 chr10 8636556 8636843 -131679922 + AluJb SINE Alu 1 294 -18 251 277 98 103 chr10 8636843 8637004 -131679761 - L2 LINE L2 -588 2725 2553 800 183 0 0 chr10 8637216 8637336 -131679429 - FLAM_C SINE Alu -22 121 2 497 302 108 29 chr10 8638020 8638364 -131678401 + MLT1J LTR MaLR 106 476 -35 1610 185 3 64 chr10 8638597 8638927 -131677838 + AluJb SINE Alu 1 310 -2 181 308 0 0 chr10 8639205 8639257 -131677508 - L2 LINE L2 0 3313 3262 846 165 0 0 chr10 8639451 8639584 -131677181 - FLAM_C SINE Alu 0 133 1 1846 129 20 0 chr10 8639651 8639944 -131676821 + AluSx SINE Alu 24 321 0 5031 94 12 0 chr10 8640260 8640912 -131675853 - L1PA10 LINE L1 -4 6164 5505 210 368 128 0 chr10 8641261 8641378 -131675387 - L2 LINE L2 -4 3268 3137 1654 171 50 4 chr10 8642214 8642494 -131674271 + AluJb SINE Alu 1 293 -19 632 241 97 5 chr10 8643119 8643314 -131673451 + L2 LINE L2 2132 2344 -970 186 43 0 0 chr10 8643315 8643338 -131673427 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 826 197 58 21 chr10 8643342 8643530 -131673235 - AluJo SINE Alu -31 281 87 180 0 0 0 chr10 8643548 8643568 -131673197 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1802 164 4 0 chr10 8643581 8643856 -131672909 - AluSx SINE Alu -36 276 1 1987 130 10 3 chr10 8644333 8644626 -131672139 - AluSx SINE Alu -17 295 1 707 304 69 42 chr10 8644626 8645128 -131671637 - L2 LINE L2 -21 3292 2706 1040 93 2 7 chr10 8645128 8645274 -131671491 - L1P LINE L1 -1500 4646 4498 2134 89 4 0 chr10 8645274 8645544 -131671221 + L1PA7 LINE L1 5884 6154 0 564 279 105 39 chr10 8645565 8645651 -131671114 - L2 LINE L2 -613 2701 2622 628 239 123 7 chr10 8645651 8645806 -131670959 + MER96 DNA MER1_type 3 175 0 564 279 105 39 chr10 8645806 8646128 -131670637 - L2 LINE L2 -692 2622 2266 240 343 52 0 chr10 8646303 8646437 -131670328 + L2 LINE L2 2890 3030 -283 1249 104 5 40 chr10 8646446 8646647 -131670118 - L1MA5A LINE L1 0 6297 6104 1148 145 0 2 chr10 8646650 8646891 -131669874 - AluJb SINE Alu -15 297 16 1665 139 20 10 chr10 8646907 8647201 -131669564 - L1MA5A LINE L1 -187 6110 5814 383 322 82 19 chr10 8647238 8647446 -131669319 + L2 LINE L2 3093 3313 0 2664 45 0 3 chr10 8647599 8647911 -131668854 - AluY SINE Alu 0 311 1 915 68 0 68 chr10 8647911 8648035 -131668730 - L1PA7 LINE L1 -7 6147 6031 1892 128 36 4 chr10 8648036 8648317 -131668448 - AluSx SINE Alu -22 290 1 558 167 0 0 chr10 8648798 8648882 -131667883 + AluJb SINE Alu 137 220 -92 2917 119 2 36 chr10 8648882 8649137 -131667628 + L1PB2 LINE L1 5721 5956 -195 2180 103 7 0 chr10 8649137 8649427 -131667338 + AluSq SINE Alu 1 292 -21 2917 119 2 36 chr10 8649427 8649616 -131667149 + L1PB2 LINE L1 5956 6150 -1 350 298 93 4 chr10 8649677 8649838 -131666927 + MIR SINE MIR 16 188 -74 679 303 85 43 chr10 8650017 8650560 -131666205 - MLT1L LTR MaLR -9 606 1 2220 112 0 20 chr10 8651050 8651355 -131665410 - AluSg SINE Alu -11 299 1 1936 166 3 0 chr10 8651386 8651688 -131665077 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 8651826 8651855 -131664910 + AT_rich Low_complexity Low_complexity 1 29 0 454 318 28 74 chr10 8652208 8652491 -131664274 + L3 LINE CR1 1307 1576 -1 357 75 0 0 chr10 8653412 8653465 -131663300 + (TA)n Simple_repeat Simple_repeat 2 54 0 2272 100 0 3 chr10 8653529 8653829 -131662936 + AluSg SINE Alu 2 300 -10 261 0 0 0 chr10 8654200 8654229 -131662536 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 244 145 43 58 chr10 8654357 8654426 -131662339 - L1P3 LINE L1 -5949 512 445 791 5 0 97 chr10 8655740 8655935 -131660830 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 372 85 16 chr10 8655999 8656128 -131660637 - L2 LINE L2 -12 3260 3123 558 348 77 23 chr10 8656178 8656696 -131660069 - L2 LINE L2 -556 2758 2213 277 324 56 9 chr10 8656854 8656962 -131659803 + L2 LINE L2 3199 3311 -2 314 293 136 16 chr10 8656992 8657234 -131659531 - L2 LINE L2 -1292 2022 1752 185 250 0 94 chr10 8657443 8657507 -131659258 - L3 LINE CR1 -219 1358 1301 1609 135 27 30 chr10 8657813 8658110 -131658655 + AluJb SINE Alu 1 296 -16 312 27 0 0 chr10 8658728 8658765 -131658000 + (TG)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr10 8658764 8658793 -131657972 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 296 306 42 119 chr10 8659431 8659833 -131656932 - L2 LINE L2 -4 3268 2898 2872 7 0 0 chr10 8659849 8660157 -131656608 - AluY SINE Alu -3 308 1 6727 94 10 3 chr10 8660165 8661400 -131655365 + L1PA12 LINE L1 4921 6161 -7 2573 52 7 0 chr10 8661801 8662106 -131654659 + AluY SINE Alu 1 307 -4 862 131 0 8 chr10 8662354 8662484 -131654281 + FLAM_C SINE Alu 1 129 -4 314 230 103 40 chr10 8662970 8663096 -131653669 + MIR SINE MIR 123 256 -6 1665 178 69 94 chr10 8663584 8663661 -131653104 - MLT1C LTR MaLR 0 467 390 1679 143 31 0 chr10 8663661 8663790 -131652975 - AluSx SINE Alu -46 266 142 423 0 0 0 chr10 8663790 8663837 -131652928 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1679 143 31 0 chr10 8663837 8663965 -131652800 - AluSx SINE Alu -170 142 1 1665 178 69 94 chr10 8663965 8664366 -131652399 - MLT1C LTR MaLR -77 390 1 314 246 25 49 chr10 8664600 8664722 -131652043 - L2 LINE L2 -15 3298 3180 595 128 0 86 chr10 8664764 8664793 -131651972 + MLT1B LTR MaLR 81 111 -279 1872 156 0 47 chr10 8664793 8665114 -131651651 + AluSx SINE Alu 1 306 -6 595 128 0 86 chr10 8665114 8665201 -131651564 + MLT1B LTR MaLR 111 187 -203 685 69 11 0 chr10 8665209 8665296 -131651469 + AluY SINE Alu 205 292 -19 992 188 15 10 chr10 8665313 8665510 -131651255 + MLT1B LTR MaLR 188 385 -5 372 216 98 10 chr10 8665514 8665616 -131651149 + MER58B DNA MER1_type 186 296 -45 2124 137 10 0 chr10 8665708 8666014 -131650751 - AluY SINE Alu -2 309 1 420 304 96 26 chr10 8666102 8666332 -131650433 - MIR SINE MIR -14 248 3 3683 153 13 38 chr10 8666408 8667088 -131649677 - L1MA9 LINE L1 -146 6166 5504 311 287 128 0 chr10 8667164 8667258 -131649507 - L2 LINE L2 -25 3288 3183 31 0 0 0 chr10 8667641 8667672 -131649093 + AT_rich Low_complexity Low_complexity 1 31 0 1997 116 13 16 chr10 8667687 8667997 -131648768 - L1PA14 LINE L1 -17 6144 5836 951 162 0 0 chr10 8668711 8668853 -131647912 - FRAM SINE Alu -15 161 20 30 59 0 0 chr10 8670273 8670324 -131646441 + AT_rich Low_complexity Low_complexity 1 51 0 219 69 0 0 chr10 8670330 8670359 -131646406 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1940 139 0 17 chr10 8670359 8670647 -131646118 - AluSx SINE Alu -23 289 7 432 0 0 0 chr10 8672376 8672424 -131644341 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 83 0 28 chr10 8672424 8672460 -131644305 + (TA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr10 8672831 8672859 -131643906 + AT_rich Low_complexity Low_complexity 1 28 0 230 296 12 12 chr10 8672917 8672998 -131643767 - MIR SINE MIR -71 137 57 207 0 0 0 chr10 8673001 8673024 -131643741 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1914 156 0 0 chr10 8673576 8673851 -131642914 + AluSx SINE Alu 1 275 -37 244 122 61 0 chr10 8674364 8674446 -131642319 + (TA)n Simple_repeat Simple_repeat 1 87 0 434 107 71 6 chr10 8674460 8674629 -131642136 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 152 57 13 chr10 8674641 8674799 -131641966 + (TA)n Simple_repeat Simple_repeat 2 166 0 247 279 85 0 chr10 8674847 8674976 -131641789 + L1MC4 LINE L1 7738 7877 -165 220 296 0 0 chr10 8674983 8675037 -131641728 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 863 119 0 0 chr10 8675257 8675399 -131641366 - FLAM_C SINE Alu 0 142 1 189 325 58 50 chr10 8675417 8675537 -131641228 - MIR SINE MIR -139 123 3 1888 149 141 8 chr10 8676619 8676995 -131639770 - MSTA LTR MaLR 0 428 3 186 279 108 31 chr10 8677137 8677266 -131639499 - L2 LINE L2 0 3313 3175 1147 279 142 33 chr10 8677340 8677490 -131639275 - L2 LINE L2 -8 3305 3173 2060 137 7 0 chr10 8677490 8677782 -131638983 + AluSx SINE Alu 8 301 -11 1147 279 142 33 chr10 8677782 8678528 -131638237 - L2 LINE L2 -140 3173 2322 1284 169 0 14 chr10 8678532 8678745 -131638020 + AluJo SINE Alu 1 210 -102 221 0 35 0 chr10 8678764 8678793 -131637972 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1992 265 199 42 chr10 8678816 8679479 -131637286 - L2 LINE L2 -988 2326 1768 2165 118 0 13 chr10 8679479 8679783 -131636982 - AluSx SINE Alu -12 300 1 1992 265 199 42 chr10 8679783 8680320 -131636445 - L2 LINE L2 -1546 1768 1316 2316 81 24 0 chr10 8680320 8680616 -131636149 - AluSp SINE Alu -10 303 1 1785 181 0 16 chr10 8680616 8680930 -131635835 - AluJo SINE Alu -3 309 1 1992 265 199 42 chr10 8680930 8681046 -131635719 - L2 LINE L2 -1997 1317 802 315 0 0 0 chr10 8683519 8683554 -131633211 + (CA)n Simple_repeat Simple_repeat 2 36 0 2335 101 0 3 chr10 8684756 8684778 -131631987 - AluY SINE Alu -4 307 286 210 105 0 0 chr10 8684778 8684816 -131631949 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2335 101 0 3 chr10 8684816 8685101 -131631664 - AluY SINE Alu -25 286 1 1392 187 90 14 chr10 8685106 8685384 -131631381 - AluJb SINE Alu -13 299 1 204 40 0 0 chr10 8685685 8685710 -131631055 + (A)n Simple_repeat Simple_repeat 1 25 0 347 122 0 0 chr10 8685922 8685971 -131630794 - L1PA13 LINE L1 -293 5870 5822 345 343 88 15 chr10 8686878 8687082 -131629683 - MIR SINE MIR -32 230 12 2004 138 0 0 chr10 8687350 8687625 -131629140 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr10 8687630 8687653 -131629112 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 805 171 0 0 chr10 8688173 8688296 -131628469 + FLAM_C SINE Alu 1 123 -20 227 227 39 16 chr10 8688936 8689064 -131627701 + (TA)n Simple_repeat Simple_repeat 2 132 0 1748 173 146 3 chr10 8689477 8689846 -131626919 + MSTB LTR MaLR 1 422 -4 375 213 71 39 chr10 8689880 8690007 -131626758 - MIR SINE MIR -120 142 12 2321 114 0 0 chr10 8691038 8691346 -131625419 - AluSg SINE Alu -2 308 1 329 342 19 26 chr10 8691566 8691721 -131625044 + MIR3 SINE MIR 9 162 -46 1506 172 67 0 chr10 8693505 8693790 -131622975 - AluJo SINE Alu -8 304 1 354 98 0 0 chr10 8696289 8696340 -131620425 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 1475 187 35 4 chr10 8696361 8696618 -131620147 - AluJo SINE Alu -47 265 1 240 122 0 0 chr10 8696653 8696694 -131620071 + (A)n Simple_repeat Simple_repeat 1 41 0 604 269 91 10 chr10 8697468 8697676 -131619089 + MIR SINE MIR 6 230 -32 788 156 57 0 chr10 8697797 8697938 -131618827 - FRAM SINE Alu 0 40 1 579 115 0 0 chr10 8697938 8698014 -131618751 - AluJ/FLAM SINE Alu -234 78 3 2610 59 0 0 chr10 8699208 8699515 -131617250 - AluY SINE Alu -4 307 1 252 59 0 0 chr10 8699710 8699744 -131617021 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1966 167 0 3 chr10 8700686 8700997 -131615768 + AluSx SINE Alu 2 311 -1 1118 150 12 0 chr10 8700997 8701157 -131615608 + AluJb SINE Alu 135 296 -16 469 274 86 16 chr10 8701778 8701964 -131614801 - MIR SINE MIR -54 208 10 640 89 50 0 chr10 8703152 8703253 -131613512 + L1PA3 LINE L1 5909 6014 -141 1630 194 36 72 chr10 8703695 8703727 -131613038 - MLT2C1 LTR ERVL -8 389 357 181 57 57 0 chr10 8703727 8703762 -131613003 + (TG)n Simple_repeat Simple_repeat 2 38 0 1630 194 36 72 chr10 8703762 8703794 -131612971 - MLT2C1 LTR ERVL -40 357 325 2013 117 47 7 chr10 8703794 8704092 -131612673 + AluSg SINE Alu 1 310 0 1630 194 36 72 chr10 8704092 8704417 -131612348 - MLT2C1 LTR ERVL -72 325 13 216 167 37 19 chr10 8706146 8706200 -131610565 + CT-rich Low_complexity Low_complexity 3 57 0 1619 182 7 39 chr10 8706596 8706903 -131609862 - AluJb SINE Alu -15 297 1 260 273 79 36 chr10 8709038 8709177 -131607588 + MIR SINE MIR 118 262 0 2222 121 3 3 chr10 8709524 8709831 -131606934 - AluSx SINE Alu -5 307 1 311 404 31 6 chr10 8710312 8710473 -131606292 + L2 LINE L2 3107 3271 -1 21 36 0 0 chr10 8712631 8712659 -131604106 + AT_rich Low_complexity Low_complexity 1 28 0 191 236 125 14 chr10 8713651 8713723 -131603042 + MIR SINE MIR 84 164 -44 191 289 19 0 chr10 8713927 8713979 -131602786 - L2 LINE L2 -2 3270 3218 214 353 106 0 chr10 8714101 8714186 -131602579 - L2 LINE L2 -40 3232 3139 241 252 160 8 chr10 8714226 8714345 -131602420 + L2 LINE L2 1181 1317 -1997 2165 102 10 0 chr10 8714346 8714641 -131602124 - AluSc SINE Alu -10 299 2 2202 129 11 33 chr10 8715123 8715487 -131601278 + L1PA14 LINE L1 5797 6152 -9 322 263 188 15 chr10 8715919 8716052 -131600713 + MER5B DNA MER1_type 21 176 -2 407 278 15 60 chr10 8716065 8716198 -131600567 - MER5B DNA MER1_type 0 178 52 781 286 45 11 chr10 8716392 8716679 -131600086 + AluJo SINE Alu 1 297 -5 840 144 0 0 chr10 8717019 8717137 -131599628 + FLAM_C SINE Alu 1 118 -25 22 36 0 55 chr10 8717143 8717163 -131599602 + AT_rich Low_complexity Low_complexity 1 21 -31 3830 95 10 0 chr10 8717163 8717657 -131599108 + L1PA10 LINE L1 5665 6163 -5 22 36 0 55 chr10 8717657 8717691 -131599074 + AT_rich Low_complexity Low_complexity 21 52 0 2234 113 10 3 chr10 8718679 8718989 -131597776 - AluSx SINE Alu 0 312 1 331 336 195 34 chr10 8719237 8719460 -131597305 + L3 LINE CR1 1099 1285 -292 1742 161 27 7 chr10 8719460 8719752 -131597013 + AluJo SINE Alu 1 298 -14 331 336 195 34 chr10 8719752 8719939 -131596826 + L3 LINE CR1 1285 1575 -2 516 106 47 35 chr10 8720514 8720599 -131596166 + FRAM SINE Alu 30 115 -61 484 66 11 66 chr10 8720933 8721024 -131595741 - L1PA13 LINE L1 0 6163 6078 1530 57 38 5 chr10 8721030 8721239 -131595526 - L1PA13 LINE L1 -44 6119 5904 2291 85 0 3 chr10 8721243 8721538 -131595227 - AluSx SINE Alu -18 294 1 216 0 0 0 chr10 8721606 8721630 -131595135 + (A)n Simple_repeat Simple_repeat 1 24 0 211 232 101 29 chr10 8722066 8722135 -131594630 + MIR SINE MIR 117 190 -72 1693 160 3 10 chr10 8722208 8722501 -131594264 - AluJo SINE Alu -13 299 9 198 0 0 0 chr10 8722542 8722564 -131594201 + (T)n Simple_repeat Simple_repeat 1 22 0 849 92 0 0 chr10 8722651 8722771 -131593994 + (TTAGGG)n Simple_repeat Simple_repeat 6 125 0 1297 68 6 28 chr10 8723056 8723232 -131593533 - L1PA4 LINE L1 -1 6154 5983 1924 133 31 3 chr10 8723255 8723549 -131593216 - AluSx SINE Alu -10 302 1 268 343 84 24 chr10 8723701 8723867 -131592898 - MIR SINE MIR -2 260 85 220 351 82 62 chr10 8723895 8724200 -131592565 - L2 LINE L2 -11 3261 2951 528 136 0 0 chr10 8725487 8725575 -131591190 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 252 178 76 119 chr10 8725636 8725754 -131591011 - MER103 DNA DNA -46 120 8 1704 153 7 27 chr10 8725905 8726199 -131590566 + AluJo SINE Alu 5 292 -20 748 294 5 23 chr10 8726207 8726425 -131590340 + MIR SINE MIR 28 241 -21 305 371 59 27 chr10 8726498 8726719 -131590046 - MIR SINE MIR -3 259 32 217 231 79 4 chr10 8726770 8726841 -131589924 - MIR SINE MIR -57 151 77 23 54 0 0 chr10 8727224 8727261 -131589504 + AT_rich Low_complexity Low_complexity 1 37 0 2054 96 64 0 chr10 8728834 8729116 -131587649 + AluSq SINE Alu 1 300 -13 243 88 0 0 chr10 8729483 8729517 -131587248 + (A)n Simple_repeat Simple_repeat 1 34 0 797 262 91 92 chr10 8729964 8730086 -131586679 - L2 LINE L2 -165 3148 3027 2266 92 3 10 chr10 8730086 8730391 -131586374 + AluSp SINE Alu 1 303 -10 797 262 91 92 chr10 8730391 8730925 -131585840 - L2 LINE L2 -286 3027 2502 1713 182 129 29 chr10 8730926 8730966 -131585799 - MER47B DNA MER2_type -1905 418 383 2738 131 13 0 chr10 8730966 8731364 -131585401 + MER57A LTR ERV1 1 403 0 1713 182 129 29 chr10 8731364 8731703 -131585062 - MER47B DNA MER2_type -1940 383 1 265 197 0 16 chr10 8731741 8731802 -131584963 + L1MA4 LINE L1 6230 6289 -11 201 108 0 0 chr10 8731810 8731821 -131584944 + (TTAA)n Simple_repeat Simple_repeat 3 13 -26 1861 161 0 20 chr10 8731821 8732125 -131584640 - AluJb SINE Alu -14 298 1 201 108 0 0 chr10 8732125 8732136 -131584629 + (TTAA)n Simple_repeat Simple_repeat 13 23 -16 2423 62 3 0 chr10 8732136 8732428 -131584337 - AluY SINE Alu -13 298 6 201 108 0 0 chr10 8732428 8732441 -131584324 + (TTAA)n Simple_repeat Simple_repeat 22 39 0 1622 232 139 24 chr10 8732451 8732985 -131583780 - L2 LINE L2 -842 2472 1878 987 201 7 97 chr10 8733022 8733301 -131583464 - L1MB8 LINE L1 0 6178 5925 2509 160 17 0 chr10 8733302 8733720 -131583045 - L1MA6 LINE L1 -237 6063 5639 372 285 16 24 chr10 8733720 8733843 -131582922 - L2 LINE L2 -1431 1883 1762 267 103 0 0 chr10 8734286 8734325 -131582440 + (TCCC)n Simple_repeat Simple_repeat 2 40 0 2059 141 7 0 chr10 8734346 8734650 -131582115 - AluSq SINE Alu -7 306 1 1833 154 3 7 chr10 8734971 8735284 -131581481 + AluSx SINE Alu 1 312 0 551 281 7 0 chr10 8735477 8735630 -131581135 + L1M4 LINE L1 5070 5223 -923 253 75 38 19 chr10 8736076 8736129 -131580636 + A-rich Low_complexity Low_complexity 2 55 0 2173 78 18 4 chr10 8736168 8736478 -131580287 + AluSq SINE Alu 2 315 0 248 259 42 105 chr10 8737197 8737340 -131579425 - L1ME1 LINE L1 -35 6131 5998 2158 235 74 10 chr10 8737347 8738066 -131578699 + L1ME1 LINE L1 5119 5885 -281 532 163 41 0 chr10 8738212 8738310 -131578455 - MLT1G LTR MaLR 0 590 489 249 108 0 0 chr10 8738374 8738411 -131578354 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 1421 193 0 53 chr10 8738411 8738712 -131578053 - AluJo SINE Alu -25 287 3 1238 268 66 70 chr10 8739175 8739750 -131577015 - MLT1G LTR MaLR -11 579 7 222 364 13 0 chr10 8739793 8739870 -131576895 + L2 LINE L2 2230 2307 -1007 36 77 0 0 chr10 8740349 8740427 -131576338 + AT_rich Low_complexity Low_complexity 1 78 0 856 157 8 0 chr10 8740444 8740578 -131576187 - AluJo SINE Alu -177 135 1 181 284 47 88 chr10 8740648 8740796 -131575969 + L2 LINE L2 2344 2485 -829 458 338 33 14 chr10 8740933 8741143 -131575622 + MIR SINE MIR 48 261 -1 2683 108 19 11 chr10 8742139 8742511 -131574254 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 8742978 8742999 -131573766 + AT_rich Low_complexity Low_complexity 1 21 0 2689 29 0 16 chr10 8743591 8743906 -131572859 - AluY SINE Alu -1 310 1 907 176 152 10 chr10 8744371 8744575 -131572190 + ORSL DNA AcHobo 19 251 -24 2198 123 0 7 chr10 8744750 8745097 -131571668 - AluSg SINE Alu 0 345 1 1414 84 0 1 chr10 8745302 8745319 -131571446 + L1PA8 LINE L1 5792 5808 -364 1339 76 32 32 chr10 8745319 8745504 -131571261 - L1PA8 LINE L1 -4 6168 5984 1414 84 0 1 chr10 8745504 8745682 -131571083 + L1PA8 LINE L1 5808 5985 -187 1022 185 0 6 chr10 8746368 8746541 -131570224 - AluJo SINE Alu -130 182 11 2264 89 0 3 chr10 8746718 8747011 -131569754 - AluSc SINE Alu -17 292 1 1914 136 43 13 chr10 8747296 8747597 -131569168 - AluSx SINE Alu -2 310 1 315 339 26 52 chr10 8747654 8747769 -131568996 + MIR SINE MIR 34 145 -63 29 28 0 0 chr10 8748210 8748246 -131568519 + AT_rich Low_complexity Low_complexity 1 36 0 201 239 22 0 chr10 8748264 8748310 -131568455 - MIR SINE MIR -10 252 206 444 340 42 37 chr10 8748518 8748862 -131567903 - L1MC/D LINE L1 -571 5591 5268 823 171 0 0 chr10 8748898 8749015 -131567750 + FLAM_C SINE Alu 2 118 -25 387 0 0 0 chr10 8749018 8749061 -131567704 + (TTA)n Simple_repeat Simple_repeat 2 44 0 600 262 131 9 chr10 8749590 8749819 -131566946 - L1ME LINE L1 -335 5786 5530 433 218 171 47 chr10 8750214 8750384 -131566381 + MIR SINE MIR 42 232 -30 230 252 107 38 chr10 8750465 8750596 -131566169 + L1ME4a LINE L1 5965 6104 -17 316 297 86 40 chr10 8750629 8751026 -131565739 + L1ME4a LINE L1 5682 6096 -25 1901 143 0 7 chr10 8751075 8751355 -131565410 + AluSx SINE Alu 16 293 -19 2400 124 19 8 chr10 8752088 8752451 -131564314 + L1MA1 LINE L1 5936 6302 0 1663 188 0 7 chr10 8752468 8752793 -131563972 + AluJb SINE Alu 1 323 0 263 323 21 4 chr10 8752982 8753111 -131563654 + MIR SINE MIR 14 147 -61 186 143 0 0 chr10 8756767 8756802 -131559963 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3289 168 42 5 chr10 8757049 8757615 -131559150 + L1PA16 LINE L1 5576 6162 -4 323 287 130 0 chr10 8759953 8760061 -131556704 + L2 LINE L2 3192 3313 0 2222 107 0 3 chr10 8761017 8761308 -131555457 - AluSc SINE Alu -19 290 1 2531 151 9 24 chr10 8761411 8761836 -131554929 - MSTA LTR MaLR -9 419 1 197 294 20 0 chr10 8763824 8763875 -131552890 + MIR SINE MIR 93 144 -64 558 263 22 62 chr10 8763889 8764068 -131552697 - MER5B DNA MER1_type -6 172 1 603 248 0 13 chr10 8765319 8765472 -131551293 + MLT1C LTR MaLR 317 467 0 1776 156 16 41 chr10 8765646 8765966 -131550799 - AluJb SINE Alu 0 312 1 1161 163 8 145 chr10 8766845 8767245 -131549520 - MLT1B LTR MaLR -3 387 43 191 367 0 22 chr10 8768146 8768236 -131548529 + MIR SINE MIR 25 112 -96 2613 82 13 16 chr10 8768312 8768688 -131548077 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr10 8770029 8770054 -131546711 + AT_rich Low_complexity Low_complexity 1 25 0 1142 211 0 31 chr10 8770085 8770312 -131546453 - AluJo SINE Alu -92 220 1 23 0 0 0 chr10 8770851 8770874 -131545891 + AT_rich Low_complexity Low_complexity 1 23 0 699 202 93 0 chr10 8771449 8771578 -131545187 + FAM SINE Alu 18 158 -27 993 104 6 12 chr10 8771578 8771751 -131545014 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 314 154 0 15 chr10 8771781 8771846 -131544919 + GA-rich Low_complexity Low_complexity 1 64 0 1836 115 83 0 chr10 8772262 8772540 -131544225 - AluSx SINE Alu -10 302 2 320 338 50 14 chr10 8772609 8772748 -131544017 - L2 LINE L2 -5 3308 3165 249 245 337 0 chr10 8772847 8772945 -131543820 + L2 LINE L2 3182 3312 -1 298 322 152 23 chr10 8772969 8773317 -131543448 - L2 LINE L2 -56 3257 2865 1254 158 0 19 chr10 8773540 8773749 -131543016 + AluJo SINE Alu 86 290 -22 1830 164 65 14 chr10 8774188 8774559 -131542206 + MLT1B LTR MaLR 1 390 0 1840 125 0 4 chr10 8774783 8775039 -131541726 + AluSx SINE Alu 1 255 -57 234 0 0 0 chr10 8775088 8775114 -131541651 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2187 98 0 0 chr10 8775234 8775568 -131541197 + AluSq SINE Alu 1 334 0 483 200 56 0 chr10 8775926 8776016 -131540749 + FRAM SINE Alu 39 133 -43 1562 189 17 14 chr10 8776348 8776644 -131540121 - AluJo SINE Alu -15 297 1 200 135 0 27 chr10 8777534 8777571 -131539194 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2225 109 0 3 chr10 8777881 8778175 -131538590 + AluSc SINE Alu 1 293 -16 329 287 130 0 chr10 8779131 8779239 -131537526 - L2 LINE L2 0 3313 3192 3035 166 42 5 chr10 8781577 8782143 -131534622 - L1PA16 LINE L1 -4 6162 5576 227 182 0 0 chr10 8782383 8782427 -131534338 + A-rich Low_complexity Low_complexity 3 46 0 1875 167 0 13 chr10 8784602 8784902 -131531863 + AluJo SINE Alu 1 296 -16 22 35 0 0 chr10 8785023 8785052 -131531713 + AT_rich Low_complexity Low_complexity 1 29 0 1984 181 37 5 chr10 8785102 8785532 -131531233 - L1MA9 LINE L1 -36 6276 5833 694 275 65 63 chr10 8785532 8785990 -131530775 - MLT1J LTR MaLR -4 507 49 759 280 27 43 chr10 8786224 8786481 -131530284 - MIR SINE MIR 0 262 11 624 252 8 0 chr10 8787078 8787205 -131529560 + MIR SINE MIR 5 132 -130 1961 131 57 35 chr10 8787234 8787601 -131529164 - THE1C LTR MaLR 0 375 1 468 300 81 25 chr10 8787672 8787832 -131528933 - MIR SINE MIR -74 188 20 283 363 67 0 chr10 8789442 8789577 -131527188 - MIR SINE MIR -109 153 10 233 410 8 0 chr10 8791192 8791314 -131525451 + L2 LINE L2 2866 2988 -284 266 73 24 0 chr10 8791331 8791372 -131525393 + (TTCC)n Simple_repeat Simple_repeat 2 43 0 1799 169 51 0 chr10 8791393 8791746 -131525019 - AluJb SINE Alu 0 312 113 369 0 0 0 chr10 8791746 8791787 -131524978 + (TTTAA)n Simple_repeat Simple_repeat 3 43 0 1799 169 51 0 chr10 8791787 8791907 -131524858 - AluJb SINE Alu -199 113 1 1890 197 135 11 chr10 8792689 8792916 -131523849 - MLT2B1 LTR ERVL -12 508 311 504 0 0 0 chr10 8792916 8792972 -131523793 + (GA)n Simple_repeat Simple_repeat 1 56 0 1890 197 135 11 chr10 8792972 8793196 -131523569 - MLT2B1 LTR ERVL -209 311 1 27 0 0 0 chr10 8793229 8793256 -131523509 + AT_rich Low_complexity Low_complexity 1 27 0 205 313 15 0 chr10 8793364 8793431 -131523334 + L2 LINE L2 3202 3269 -3 5337 260 95 19 chr10 8793453 8794504 -131522261 - L1MEc LINE L1 -3613 2602 1632 264 30 0 0 chr10 8794504 8794537 -131522228 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5337 260 95 19 chr10 8794537 8795910 -131520855 - L1MEc LINE L1 -4583 1632 47 446 274 113 21 chr10 8797636 8797822 -131518943 + MIR SINE MIR 59 261 -1 231 391 115 0 chr10 8798020 8798212 -131518553 + L3b LINE CR1 1350 1563 -20 1683 180 32 42 chr10 8798472 8798850 -131517915 - MLT1A2 LTR MaLR 0 374 1 1975 119 96 94 chr10 8799026 8799453 -131517312 - MSTA LTR MaLR 0 428 1 797 243 29 9 chr10 8801705 8801915 -131514850 - MER58A DNA MER1_type -8 216 3 424 214 97 62 chr10 8803124 8803269 -131513496 + MIR SINE MIR 99 248 -14 450 79 0 0 chr10 8803698 8803761 -131513004 + (CA)n Simple_repeat Simple_repeat 2 64 0 533 295 23 29 chr10 8805365 8805538 -131511227 - MIR3 SINE MIR -7 201 30 2179 96 19 29 chr10 8805693 8806007 -131510758 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 8806339 8806362 -131510403 + AT_rich Low_complexity Low_complexity 1 23 0 223 320 87 0 chr10 8806807 8806910 -131509855 - MIR SINE MIR -46 216 105 1012 249 119 21 chr10 8807134 8807603 -131509162 - L1ME1 LINE L1 -8 6158 5644 278 273 11 68 chr10 8807821 8807909 -131508856 - L2 LINE L2 -1 3271 3189 198 0 0 0 chr10 8808012 8808034 -131508731 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 543 16 0 0 chr10 8808033 8808097 -131508668 + (GA)n Simple_repeat Simple_repeat 1 64 0 299 130 19 0 chr10 8808827 8808881 -131507884 + (TA)n Simple_repeat Simple_repeat 2 56 0 324 233 11 22 chr10 8808889 8808979 -131507786 + L1MC4 LINE L1 6614 6702 -1340 260 266 11 21 chr10 8808982 8809076 -131507689 + (TA)n Simple_repeat Simple_repeat 1 93 0 526 148 16 23 chr10 8809087 8809215 -131507550 + (CATATA)n Simple_repeat Simple_repeat 2 128 0 183 264 0 57 chr10 8809877 8809930 -131506835 + MIR SINE MIR 205 254 -8 455 276 56 60 chr10 8810538 8810623 -131506142 - MIR SINE MIR 0 262 178 1801 159 48 40 chr10 8810623 8810995 -131505770 - THE1C LTR MaLR 0 375 1 455 276 56 60 chr10 8810995 8811141 -131505624 - MIR SINE MIR -84 178 32 651 230 63 0 chr10 8811275 8811449 -131505316 + MER58B DNA MER1_type 1 185 -156 639 255 31 0 chr10 8811521 8811682 -131505083 + MER58B DNA MER1_type 176 341 0 561 91 0 0 chr10 8811721 8811798 -131504967 - AluSc SINE Alu -180 129 53 772 252 55 18 chr10 8811897 8812115 -131504650 + MIR SINE MIR 32 257 -5 1655 128 45 0 chr10 8812551 8812794 -131503971 - AluSc SINE Alu -3 306 53 189 171 0 0 chr10 8812906 8812941 -131503824 + G-rich Low_complexity Low_complexity 1 35 0 1715 174 31 0 chr10 8813057 8813351 -131503414 + AluJo SINE Alu 1 303 -9 567 296 6 23 chr10 8813796 8813968 -131502797 + MIR SINE MIR 48 216 -46 322 353 92 0 chr10 8814054 8814207 -131502558 - MIR SINE MIR -72 190 24 2211 103 23 10 chr10 8815409 8815710 -131501055 - AluSq SINE Alu -8 305 1 400 345 78 14 chr10 8815969 8816250 -131500515 - L1ME4a LINE L1 -265 5856 5558 207 100 0 0 chr10 8816299 8816329 -131500436 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 1605 157 27 27 chr10 8816477 8816771 -131499994 - AluJo SINE Alu -18 294 1 2015 135 0 0 chr10 8816817 8817098 -131499667 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr10 8817102 8817129 -131499636 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 578 312 113 0 chr10 8817157 8817378 -131499387 - MIR SINE MIR 0 262 17 1039 242 107 0 chr10 8817406 8817750 -131499015 - L1MB7 LINE L1 0 6184 5790 22 35 0 0 chr10 8818428 8818457 -131498308 + AT_rich Low_complexity Low_complexity 1 29 0 387 0 0 0 chr10 8818481 8818524 -131498241 + (CA)n Simple_repeat Simple_repeat 2 44 0 2086 117 0 26 chr10 8819837 8820144 -131496621 - AluSx SINE Alu -12 300 2 463 300 78 120 chr10 8820584 8821023 -131495742 - L2 LINE L2 -549 2765 2354 1485 192 8 0 chr10 8821023 8821283 -131495482 - AluJb SINE Alu -8 304 43 463 300 78 120 chr10 8821283 8821409 -131495356 - L2 LINE L2 -960 2354 2224 482 238 12 93 chr10 8821898 8822070 -131494695 - MIR SINE MIR -49 213 56 2139 133 0 22 chr10 8822739 8823056 -131493709 - AluSx SINE Alu -2 310 1 227 264 19 0 chr10 8824567 8824620 -131492145 - Charlie8 DNA MER1_type -2363 54 1 398 300 53 35 chr10 8825431 8825658 -131491107 + MLT1L LTR MaLR 368 598 -17 426 304 21 42 chr10 8825797 8825988 -131490777 + MIR SINE MIR 36 222 -40 273 156 39 0 chr10 8826006 8826083 -131490682 + (TA)n Simple_repeat Simple_repeat 1 80 0 2251 87 0 10 chr10 8826083 8826372 -131490393 - AluY SINE Alu -25 286 1 426 305 35 17 chr10 8826440 8826614 -131490151 - MIR SINE MIR -77 185 9 380 303 72 31 chr10 8826703 8826901 -131489864 - MIR SINE MIR -18 244 45 213 321 0 0 chr10 8827872 8827925 -131488840 - MIR3 SINE MIR -42 166 114 631 293 64 48 chr10 8827930 8828179 -131488586 - MIR SINE MIR 0 262 10 230 0 33 0 chr10 8828317 8828347 -131488418 + (CA)n Simple_repeat Simple_repeat 2 32 0 1215 128 159 23 chr10 8828891 8829148 -131487617 + L1MC1 LINE L1 5322 5613 -720 686 111 157 0 chr10 8829149 8829257 -131487508 - FLAM_C SINE Alu -18 125 1 1626 184 3 14 chr10 8829265 8829559 -131487206 - AluJo SINE Alu 0 312 22 4040 154 33 0 chr10 8829560 8830266 -131486499 + L1MC1 LINE L1 5605 6333 0 206 374 0 0 chr10 8830482 8830573 -131486192 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 300 359 49 0 chr10 8831442 8831584 -131485181 - MIR SINE MIR 0 262 114 2350 113 0 0 chr10 8831636 8831946 -131484819 - AluSx SINE Alu -2 310 1 615 335 35 19 chr10 8832131 8832388 -131484377 + MIR SINE MIR 2 262 0 350 115 16 0 chr10 8832960 8833021 -131483744 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1112 82 6 22 chr10 8833035 8833217 -131483548 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 326 286 22 0 chr10 8833225 8833316 -131483449 + CT-rich Low_complexity Low_complexity 3 95 0 213 288 17 0 chr10 8835430 8835489 -131481276 + MIR3 SINE MIR 106 165 -43 2282 119 0 0 chr10 8836336 8836629 -131480136 + AluSx SINE Alu 3 295 -17 21 0 0 0 chr10 8837065 8837086 -131479679 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 8838730 8838768 -131477997 + AT_rich Low_complexity Low_complexity 1 38 0 33 43 0 0 chr10 8838946 8838993 -131477772 + AT_rich Low_complexity Low_complexity 1 47 0 195 184 0 0 chr10 8841479 8841517 -131475248 + (CA)n Simple_repeat Simple_repeat 1 38 0 212 374 65 9 chr10 8842518 8842625 -131474140 - MIR SINE MIR -103 159 47 1832 197 35 12 chr10 8843314 8843698 -131473067 - MER45B DNA AcHobo -541 1040 667 198 0 0 0 chr10 8843698 8843720 -131473045 + (TA)n Simple_repeat Simple_repeat 2 23 0 2241 70 0 0 chr10 8843720 8843990 -131472775 - AluSg SINE Alu -17 293 24 1832 197 35 12 chr10 8843990 8844026 -131472739 - MER45B DNA AcHobo -913 668 609 1108 264 71 10 chr10 8844022 8844333 -131472432 - MER45B DNA AcHobo -710 330 1 * 2148 100 0 7 chr10 8844618 8844897 -131471868 + AluSq SINE Alu 1 277 -36 375 23 0 0 chr10 8844898 8844942 -131471823 + (TAA)n Simple_repeat Simple_repeat 1 44 0 1984 158 0 0 chr10 8844957 8845261 -131471504 + AluJb SINE Alu 9 312 0 484 263 0 8 chr10 8845715 8845833 -131470932 - MIR SINE MIR -10 252 136 336 222 111 46 chr10 8845830 8845913 -131470852 + MIR SINE MIR 18 111 -151 * 2594 107 3 8 chr10 8845913 8846279 -131470486 - THE1B LTR MaLR 0 364 1 336 222 111 46 chr10 8846279 8846303 -131470462 + MIR SINE MIR 111 132 -130 22 0 0 0 chr10 8846693 8846715 -131470050 + AT_rich Low_complexity Low_complexity 1 22 0 198 361 165 0 chr10 8846721 8846818 -131469947 + MIR SINE MIR 33 145 -63 1042 159 107 83 chr10 8847487 8847814 -131468951 + MSTB1 LTR MaLR 3 337 -95 373 41 0 0 chr10 8847814 8847863 -131468902 - MADE1 DNA Mariner 0 80 32 25 0 0 0 chr10 8847949 8847974 -131468791 + AT_rich Low_complexity Low_complexity 1 25 0 2372 78 0 29 chr10 8847978 8848285 -131468480 + AluSx SINE Alu 1 298 -14 803 366 62 14 chr10 8848935 8849372 -131467393 - L3 LINE CR1 -967 610 153 466 282 38 132 chr10 8849576 8849970 -131466795 - L2 LINE L2 -54 3218 2862 344 264 99 19 chr10 8851447 8851768 -131464997 + L1M4c LINE L1 1370 1882 -4621 1830 289 52 25 chr10 8852103 8853125 -131463640 + L1ME3A LINE L1 1114 2163 -4233 1529 191 66 3 chr10 8853125 8853413 -131463352 + AluJo SINE Alu 1 306 -6 1205 125 0 17 chr10 8853413 8853589 -131463176 + AluSg/x SINE Alu 132 304 -6 2157 266 43 55 chr10 8853591 8855072 -131461693 + L1ME3A LINE L1 2152 3574 -2641 557 253 43 6 chr10 8855071 8855233 -131461532 + L1ME3A LINE L1 4074 4241 -1974 * 456 171 178 79 chr10 8855275 8855427 -131461338 - MLT1B LTR MaLR -223 167 1 21 0 0 0 chr10 8855471 8855492 -131461273 + AT_rich Low_complexity Low_complexity 1 21 0 4473 59 2 0 chr10 8855502 8856061 -131460704 + L1PA7 LINE L1 5591 6150 -4 2653 216 36 43 chr10 8856064 8856368 -131460397 + L1ME1 LINE L1 5189 5493 -673 1301 192 123 18 chr10 8856368 8856644 -131460121 + AluJb SINE Alu 1 305 -7 2653 216 36 43 chr10 8856644 8857279 -131459486 + L1ME1 LINE L1 5493 6122 -44 373 283 92 6 chr10 8857375 8857548 -131459217 + L1ME3A LINE L1 4401 4588 -1627 276 91 0 0 chr10 8857601 8857645 -131459120 + (TG)n Simple_repeat Simple_repeat 1 44 0 776 270 97 58 chr10 8857712 8857806 -131458959 + L1ME3A LINE L1 4765 4854 -1385 2535 108 5 24 chr10 8857806 8858175 -131458590 - THE1B LTR MaLR 0 364 3 776 270 97 58 chr10 8858175 8859281 -131457484 + L1ME3A LINE L1 4854 6018 -221 234 0 0 0 chr10 8859551 8859577 -131457188 + (T)n Simple_repeat Simple_repeat 1 26 0 237 329 120 19 chr10 8860048 8860206 -131456559 + MIR SINE MIR 28 201 -61 2288 118 0 0 chr10 8861660 8861964 -131454801 - AluSg SINE Alu -6 304 1 848 148 8 0 chr10 8861982 8862104 -131454661 - FLAM_C SINE Alu -19 124 2 470 291 114 29 chr10 8863710 8863920 -131452845 - MIR SINE MIR -13 249 22 531 339 15 0 chr10 8864757 8864952 -131451813 + MIR SINE MIR 63 260 -2 222 160 20 20 chr10 8865208 8865258 -131451507 + GA-rich Low_complexity Low_complexity 2 51 0 266 305 23 69 chr10 8868525 8868656 -131448109 - MIR SINE MIR -73 189 65 2246 105 7 0 chr10 8869961 8870256 -131446509 - AluSx SINE Alu -15 297 1 407 325 48 48 chr10 8870315 8870503 -131446262 - MER5A DNA MER1_type -1 188 1 28 48 0 0 chr10 8872183 8872225 -131444540 + AT_rich Low_complexity Low_complexity 1 42 0 2078 124 0 0 chr10 8872227 8872534 -131444231 + AluSx SINE Alu 1 307 0 345 296 21 21 chr10 8872534 8872676 -131444089 + MIR SINE MIR 121 262 0 749 250 44 44 chr10 8873269 8873517 -131443248 + MIR SINE MIR 14 261 -1 2258 124 0 0 chr10 8873725 8874031 -131442734 - AluSx SINE Alu -6 306 1 489 34 0 0 chr10 8874591 8874650 -131442115 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 2242 114 10 0 chr10 8875277 8875610 -131441155 - AluSc SINE Alu 0 336 1 1228 160 48 72 chr10 8875768 8876016 -131440749 + MER33 DNA MER1_type 2 242 -2343 3540 87 16 0 chr10 8876016 8876508 -131440257 - L1PA8 LINE L1 -13 6159 5660 1228 160 48 72 chr10 8876508 8876590 -131440175 + MER33 DNA MER1_type 242 324 0 217 154 26 0 chr10 8876950 8876989 -131439776 + GA-rich Low_complexity Low_complexity 1 40 0 29 0 0 0 chr10 8877177 8877206 -131439559 + AT_rich Low_complexity Low_complexity 1 29 0 2165 142 0 0 chr10 8877206 8877501 -131439264 + AluSg SINE Alu 1 295 -15 739 200 0 0 chr10 8877515 8877635 -131439130 - FLAM_C SINE Alu -23 120 1 22 0 0 0 chr10 8878659 8878681 -131438084 + AT_rich Low_complexity Low_complexity 1 22 0 263 331 65 48 chr10 8879148 8879272 -131437493 + MIR SINE MIR 20 145 -63 224 372 141 26 chr10 8879359 8879926 -131436839 - L2 LINE L2 -411 2903 2272 3146 173 28 11 chr10 8880018 8880664 -131436101 + L1MB8 LINE L1 5520 6176 -2 312 282 48 24 chr10 8880752 8880876 -131435889 + L1MEd LINE L1 2 128 -5991 602 318 125 24 chr10 8880995 8881458 -131435307 + L1MEd LINE L1 260 769 -5350 500 290 12 35 chr10 8881781 8881950 -131434815 + MIR SINE MIR 20 184 -78 294 316 95 6 chr10 8882061 8882219 -131434546 + LTR16A LTR ERVL 111 282 -168 1052 161 71 14 chr10 8883864 8884075 -131432690 + AluJb SINE Alu 90 312 0 239 271 43 0 chr10 8884807 8884877 -131431888 - MIR SINE MIR -188 74 2 641 263 75 42 chr10 8884945 8885158 -131431607 - MIR SINE MIR -33 229 10 187 304 0 0 chr10 8885177 8885223 -131431542 - L3 LINE CR1 -12 1565 1520 229 355 0 11 chr10 8885224 8885317 -131431448 - MIR SINE MIR -118 144 53 1761 148 4 11 chr10 8885536 8885813 -131430952 + AluSx SINE Alu 1 275 -37 1117 56 25 0 chr10 8885818 8885978 -131430787 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 267 103 0 0 chr10 8885978 8886017 -131430748 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 200 299 51 43 chr10 8887528 8887645 -131429120 - L2 LINE L2 -6 3307 3190 482 311 33 0 chr10 8888125 8888308 -131428457 + MER5A DNA MER1_type 1 189 0 2536 90 11 25 chr10 8888832 8889197 -131427568 - THE1B LTR MaLR -4 360 1 2183 154 16 102 chr10 8889255 8889755 -131427010 - LTR32 LTR ERVL 0 471 15 23 0 0 0 chr10 8890986 8891009 -131425756 + AT_rich Low_complexity Low_complexity 1 23 0 1939 147 27 0 chr10 8892668 8892961 -131423804 - AluJb SINE Alu -11 301 1 205 358 63 21 chr10 8893240 8893335 -131423430 - L2 LINE L2 -33 3280 3182 244 274 16 24 chr10 8893352 8893476 -131423289 + (TA)n Simple_repeat Simple_repeat 1 123 0 26 88 0 0 chr10 8893873 8893941 -131422824 + AT_rich Low_complexity Low_complexity 1 68 0 809 181 0 0 chr10 8893968 8894101 -131422664 - FLAM_C SINE Alu 0 133 1 401 144 0 44 chr10 8894138 8894228 -131422537 + MER53 DNA DNA 102 187 -2 225 315 63 55 chr10 8894341 8894468 -131422297 - MIR SINE MIR -132 130 3 446 224 13 90 chr10 8894814 8894970 -131421795 - MIR SINE MIR -48 214 71 183 200 0 0 chr10 8895108 8895143 -131421622 + MIR SINE MIR 73 107 -155 26 30 0 0 chr10 8895972 8896005 -131420760 + AT_rich Low_complexity Low_complexity 1 33 0 204 283 55 97 chr10 8898177 8898322 -131418443 + MIR SINE MIR 20 158 -50 561 133 80 44 chr10 8899506 8899619 -131417146 - FLAM_C SINE Alu -26 117 1 5005 138 25 7 chr10 8901068 8901913 -131414852 + L1PB4 LINE L1 4934 5811 -345 327 25 0 0 chr10 8901913 8901953 -131414812 + (CA)n Simple_repeat Simple_repeat 2 41 0 5005 138 25 7 chr10 8901953 8902298 -131414467 + L1PB4 LINE L1 5811 6148 -8 252 317 64 94 chr10 8902699 8903027 -131413738 + L2 LINE L2 2874 3191 -81 633 216 26 0 chr10 8903230 8903346 -131413419 - 5S rRNA rRNA -2 119 1 22 0 0 0 chr10 8903545 8903567 -131413198 + AT_rich Low_complexity Low_complexity 1 22 0 279 228 127 111 chr10 8903609 8904043 -131412722 - HAL1b LINE L1 -37 1311 871 217 186 29 0 chr10 8904089 8904159 -131412606 + (TA)n Simple_repeat Simple_repeat 1 72 0 325 325 40 15 chr10 8904303 8904503 -131412262 - HAL1b LINE L1 -730 618 414 22 0 0 0 chr10 8905066 8905088 -131411677 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 8905851 8905874 -131410891 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2026 101 11 14 chr10 8905876 8906152 -131410613 - AluSx SINE Alu -31 281 7 283 327 74 0 chr10 8906430 8906592 -131410173 + L1ME LINE L1 5629 5802 -319 409 253 12 0 chr10 8907729 8907891 -131408874 + (TA)n Simple_repeat Simple_repeat 2 165 0 2108 110 6 0 chr10 8907891 8908219 -131408546 + L1P5 LINE L1 5419 5748 -408 561 158 0 0 chr10 8908245 8908346 -131408419 + (CA)n Simple_repeat Simple_repeat 2 102 0 1980 154 0 3 chr10 8910387 8910699 -131406066 - AluSx SINE Alu -1 311 1 22 94 0 0 chr10 8911275 8911339 -131405426 + AT_rich Low_complexity Low_complexity 1 64 0 224 301 36 12 chr10 8911742 8911825 -131404940 - L2 LINE L2 -212 3060 2976 287 263 0 50 chr10 8911929 8912028 -131404737 - MIR SINE MIR -51 211 118 219 156 0 78 chr10 8912360 8912424 -131404341 + A-rich Low_complexity Low_complexity 2 60 0 441 0 0 0 chr10 8913282 8913331 -131403434 + (CA)n Simple_repeat Simple_repeat 2 50 0 1949 144 18 0 chr10 8913351 8913628 -131403137 - AluSx SINE Alu -30 282 1 233 357 57 21 chr10 8913728 8913868 -131402897 - L2 LINE L2 -2 3311 3167 379 316 58 23 chr10 8914027 8914201 -131402564 - MIR SINE MIR -20 242 63 1325 192 106 32 chr10 8914369 8914738 -131402027 - MLT1F LTR MaLR -4 538 143 1884 123 75 34 chr10 8914762 8915120 -131401645 - THE1C LTR MaLR -2 373 1 727 242 0 0 chr10 8917442 8917603 -131399162 - L1PB4 LINE L1 -2 6154 5994 249 57 0 0 chr10 8917664 8917699 -131399066 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 29 28 0 0 chr10 8917744 8917780 -131398985 + AT_rich Low_complexity Low_complexity 1 36 0 485 247 50 119 chr10 8918732 8918976 -131397789 - MLT1A1 LTR MaLR -3 587 312 1100 145 21 21 chr10 8919004 8919197 -131397568 - MLT1A1 LTR MaLR -171 194 2 668 113 19 0 chr10 8919197 8919303 -131397462 + L1MB7 LINE L1 6069 6176 -8 375 160 32 43 chr10 8919304 8919398 -131397367 + Charlie5 DNA MER1_type 2523 2615 0 25 31 0 0 chr10 8919968 8920000 -131396765 + AT_rich Low_complexity Low_complexity 1 32 0 205 200 0 0 chr10 8920286 8920326 -131396439 + T-rich Low_complexity Low_complexity 1 40 0 1572 85 4 17 chr10 8920394 8920629 -131396136 - L1MA2 LINE L1 0 6304 6073 25 0 0 0 chr10 8921074 8921099 -131395666 + AT_rich Low_complexity Low_complexity 1 25 0 1895 152 37 37 chr10 8922429 8922804 -131393961 - THE1C LTR MaLR 0 375 1 426 300 8 8 chr10 8923380 8923510 -131393255 + MLT1L LTR MaLR 24 153 -462 617 281 88 12 chr10 8923513 8923684 -131393081 + MER5A DNA MER1_type 2 185 -4 1098 288 47 32 chr10 8923684 8924149 -131392616 + MLT1L LTR MaLR 144 615 0 315 0 0 0 chr10 8924992 8925027 -131391738 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 989 113 78 0 chr10 8925027 8925168 -131391597 - AluSp SINE Alu -32 281 130 267 54 0 0 chr10 8925291 8925328 -131391437 + (T)n Simple_repeat Simple_repeat 1 37 0 966 106 8 0 chr10 8925328 8925460 -131391305 - AluSp SINE Alu -180 133 1 267 41 61 0 chr10 8925754 8925803 -131390962 + (TA)n Simple_repeat Simple_repeat 1 52 0 3529 151 27 5 chr10 8925831 8926093 -131390672 + L1PB4 LINE L1 5520 5775 -381 234 62 0 0 chr10 8926093 8926125 -131390640 + (CA)n Simple_repeat Simple_repeat 2 33 0 3529 151 27 5 chr10 8926125 8926484 -131390281 + L1PB4 LINE L1 5775 6155 -1 516 125 0 0 chr10 8926566 8926646 -131390119 + MADE1 DNA Mariner 1 80 0 236 301 43 32 chr10 8927324 8927417 -131389348 - MIR SINE MIR -15 247 154 1155 77 6 22 chr10 8927927 8928110 -131388655 + (TTC)n Simple_repeat Simple_repeat 1 180 0 610 169 22 0 chr10 8928110 8928246 -131388519 + CT-rich Low_complexity Low_complexity 4 142 0 1750 136 4 0 chr10 8928263 8928514 -131388251 - AluSp SINE Alu -23 290 39 192 125 0 0 chr10 8929039 8929071 -131387694 + (TAA)n Simple_repeat Simple_repeat 2 33 0 329 280 75 0 chr10 8929077 8929170 -131387595 - MIR SINE MIR -3 259 160 501 250 30 18 chr10 8930865 8931033 -131385732 - MER96B DNA MER1_type? -247 170 1 200 184 20 0 chr10 8931113 8931162 -131385603 + GA-rich Low_complexity Low_complexity 3 52 0 1144 62 0 0 chr10 8931205 8931351 -131385414 - L1P3 LINE L1 -595 5559 5414 3871 71 4 2 chr10 8931351 8931858 -131384907 + L1PA7 LINE L1 5627 6135 -19 1610 192 0 19 chr10 8932921 8933229 -131383536 - AluJo SINE Alu -10 302 1 2180 114 0 16 chr10 8934112 8934419 -131382346 + AluSx SINE Alu 1 302 -10 263 286 26 13 chr10 8936006 8936083 -131380682 + MIR SINE MIR 18 95 -167 243 358 36 21 chr10 8936140 8936333 -131380432 + L2 LINE L2 3118 3313 0 2379 38 7 3 chr10 8936504 8936797 -131379968 - L1PA4 LINE L1 0 6155 5862 357 211 103 51 chr10 8936797 8936894 -131379871 - FLAM_A SINE Alu -31 102 22 22 70 0 0 chr10 8937045 8937088 -131379677 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr10 8937920 8937941 -131378824 + AT_rich Low_complexity Low_complexity 1 21 0 974 278 45 42 chr10 8938015 8938396 -131378369 + L1ME LINE L1 3 384 -5686 388 91 152 0 chr10 8938989 8939055 -131377710 + MADE1 DNA Mariner 5 80 0 409 260 179 36 chr10 8939450 8939646 -131377119 + MIR SINE MIR 13 236 -26 271 266 89 57 chr10 8939661 8939785 -131376980 - MIR SINE MIR -25 237 110 3555 77 30 10 chr10 8940210 8940717 -131376048 + L1PA13 LINE L1 5646 6162 -1 2206 123 0 0 chr10 8941723 8942025 -131374740 + AluSx SINE Alu 1 302 -10 242 217 22 0 chr10 8942309 8942355 -131374410 + AluJ/monomer SINE Alu 1 47 -254 2090 126 0 0 chr10 8942874 8943167 -131373598 + AluSc SINE Alu 1 293 -16 341 378 25 51 chr10 8943399 8943714 -131373051 - L2 LINE L2 0 3272 2966 2390 88 0 0 chr10 8945998 8946295 -131370470 + AluSg SINE Alu 1 297 -13 322 236 113 0 chr10 8946604 8946710 -131370055 - L1ME4a LINE L1 -1 6120 6003 366 316 23 0 chr10 8946905 8947079 -131369686 - L1ME4a LINE L1 -237 5884 5707 249 269 39 58 chr10 8947092 8947196 -131369569 + L2 LINE L2 3212 3313 0 228 241 0 0 chr10 8947221 8947275 -131369490 - L1ME4a LINE L1 -461 5660 5607 37 0 0 0 chr10 8947486 8947523 -131369242 + AT_rich Low_complexity Low_complexity 1 37 0 507 270 167 15 chr10 8947754 8947958 -131368807 + MIR SINE MIR 12 246 -16 207 0 0 0 chr10 8949937 8949960 -131366805 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 327 32 46 chr10 8950233 8950450 -131366315 + MIR SINE MIR 48 261 -1 1788 72 42 0 chr10 8950912 8951149 -131365616 - L1P4 LINE L1 -448 5713 5467 2145 101 3 0 chr10 8951153 8951463 -131365302 + AluSg SINE Alu 1 311 0 2286 124 3 3 chr10 8951465 8951819 -131364946 + L1PA14 LINE L1 5806 6159 -2 339 169 0 0 chr10 8951955 8952031 -131364734 - AluS SINE Alu -240 61 2 1509 193 3 0 chr10 8952031 8952347 -131364418 - L1M4 LINE L1 -1689 5478 5162 418 288 122 14 chr10 8952411 8952721 -131364044 - L1ME4a LINE L1 -755 5391 5143 381 318 69 11 chr10 8953947 8954183 -131362582 + MLT1J2 LTR MaLR 1 210 -240 841 369 109 3 chr10 8954478 8955111 -131361654 - L2 LINE L2 0 3313 2614 327 332 117 19 chr10 8955100 8955305 -131361460 + MIR SINE MIR 29 253 -9 * 480 301 81 35 chr10 8955659 8955832 -131360933 - MIR SINE MIR -48 214 34 7710 209 41 18 chr10 8955841 8956756 -131360009 - L1M4 LINE L1 -1953 5214 4322 441 36 0 0 chr10 8956756 8956811 -131359954 + (TG)n Simple_repeat Simple_repeat 1 55 0 1663 176 0 47 chr10 8956812 8957108 -131359657 - AluJo SINE Alu -30 282 1 7710 209 41 18 chr10 8957108 8958125 -131358640 - L1M4 LINE L1 -2844 4323 3235 225 0 0 0 chr10 8958179 8958204 -131358561 + (TG)n Simple_repeat Simple_repeat 2 26 0 1638 127 0 4 chr10 8958228 8958464 -131358301 - AluSx SINE Alu -77 235 1 3103 266 54 17 chr10 8958475 8960321 -131356444 - L1M4 LINE L1 -3944 3223 1614 499 261 67 0 chr10 8961286 8961405 -131355360 - FLAM_A SINE Alu -6 127 1 265 204 0 0 chr10 8962517 8962566 -131354199 - MIR3 SINE MIR -6 202 154 1968 121 0 16 chr10 8962727 8963041 -131353724 - L1PA13 LINE L1 -1 6162 5854 402 183 11 32 chr10 8963041 8963134 -131353631 - THE1C LTR MaLR 0 428 338 1315 141 65 43 chr10 8963239 8963516 -131353249 - THE1C LTR MaLR -91 284 2 392 154 0 0 chr10 8963517 8963582 -131353183 - L1PA13 LINE L1 -305 5858 5794 1849 149 21 0 chr10 8963584 8963872 -131352893 - AluJb SINE Alu -18 294 1 21 0 0 0 chr10 8964218 8964239 -131352526 + AT_rich Low_complexity Low_complexity 1 21 0 2170 220 121 30 chr10 8965224 8965274 -131351491 - MLT1E1 LTR MaLR 0 654 610 2825 130 16 5 chr10 8965274 8965697 -131351068 + MSTA LTR MaLR 1 428 0 2170 220 121 30 chr10 8965697 8966253 -131350512 - MLT1E1 LTR MaLR -44 610 1 206 116 23 0 chr10 8968070 8968113 -131348652 + CT-rich Low_complexity Low_complexity 1 44 0 756 199 76 28 chr10 8968154 8968405 -131348360 + MER114 LTR ERV 235 497 -151 387 0 0 0 chr10 8968675 8968718 -131348047 + (TG)n Simple_repeat Simple_repeat 2 44 0 284 214 0 0 chr10 8969754 8969810 -131346955 + MER94 DNA DNA 75 130 -4 676 333 59 71 chr10 8969820 8970396 -131346369 + MLT1K LTR MaLR 2 570 -18 2881 9 0 0 chr10 8970750 8971068 -131345697 - AluYb8 SINE Alu 0 318 1 389 283 145 0 chr10 8971170 8971315 -131345450 + MIR SINE MIR 74 239 -23 5759 67 0 0 chr10 8971537 8972300 -131344465 - L1PA6 LINE L1 -991 5155 4393 6982 51 5 5 chr10 8972300 8973292 -131343473 + L1PA6 LINE L1 5148 6136 -18 1973 150 10 0 chr10 8973854 8974161 -131342604 - AluJb SINE Alu -2 310 1 720 275 29 35 chr10 8974427 8974656 -131342109 + MIR SINE MIR 22 249 -13 223 263 53 0 chr10 8974855 8974912 -131341853 + MIR3 SINE MIR 113 172 -36 858 136 0 0 chr10 8975162 8975294 -131341471 - L1MA2 LINE L1 -1 6303 6172 1584 159 32 2 chr10 8975858 8976249 -131340516 - L1MA7 LINE L1 -1 6290 5782 246 32 0 0 chr10 8976250 8976281 -131340484 + (CA)n Simple_repeat Simple_repeat 2 32 0 268 196 20 0 chr10 8976281 8976332 -131340433 + L1M2 LINE L1 5647 5698 -593 247 130 0 0 chr10 8976402 8976448 -131340317 + LTR66 LTR ERVL 394 439 -171 314 326 0 0 chr10 8976463 8976552 -131340213 - L1MC4 LINE L1 -1340 6702 6614 * 349 292 0 0 chr10 8976473 8976562 -131340203 + L1MC4 LINE L1 6615 6703 -1339 697 206 21 21 chr10 8976998 8977187 -131339578 - MER53 DNA DNA 0 189 1 288 0 0 0 chr10 8977714 8977746 -131339019 + (CA)n Simple_repeat Simple_repeat 1 32 0 2036 129 0 3 chr10 8978186 8978480 -131338285 + AluSx SINE Alu 1 293 -19 969 192 34 24 chr10 8978791 8978999 -131337766 - MER6B DNA MER2_type 0 210 1 2107 108 0 9 chr10 8979028 8979343 -131337422 - L1PB1 LINE L1 -7 6144 5833 221 379 21 0 chr10 8979472 8979567 -131337198 - MIR SINE MIR -69 139 43 220 276 5 0 chr10 8980114 8980169 -131336596 + MIR SINE MIR 43 100 -108 423 346 33 40 chr10 8983188 8983460 -131333305 + L1ME LINE L1 46 315 -5755 684 180 66 0 chr10 8983513 8983635 -131333130 - FLAM_A SINE Alu 0 133 4 404 244 40 49 chr10 8983934 8984159 -131332606 + L1ME LINE L1 526 748 -5322 236 100 0 20 chr10 8984396 8984446 -131332319 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr10 8985371 8985401 -131331364 + AT_rich Low_complexity Low_complexity 1 30 0 1741 138 0 0 chr10 8985403 8985657 -131331108 + AluSx SINE Alu 3 256 -56 189 0 0 0 chr10 8986642 8986663 -131330102 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2106 104 0 10 chr10 8986665 8986954 -131329811 - AluY SINE Alu -23 288 3 444 305 69 42 chr10 8987209 8987471 -131329294 - MER102a DNA MER1_type -19 311 43 21 36 0 0 chr10 8987956 8987984 -131328781 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr10 8988810 8988842 -131327923 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 212 302 93 35 chr10 8988854 8988940 -131327825 + MIR3 SINE MIR 115 205 -3 1741 91 4 0 chr10 8989631 8989861 -131326904 + AluSq SINE Alu 73 303 -10 2447 50 0 3 chr10 8990042 8990342 -131326423 - AluY SINE Alu -12 299 1 362 340 92 57 chr10 8991533 8991572 -131325193 + L1MEd LINE L1 375 411 -5794 4598 89 1 15 chr10 8991572 8992235 -131324530 + L1PA10 LINE L1 5514 6167 -1 362 340 92 57 chr10 8992235 8992651 -131324114 + L1MEd LINE L1 411 846 -5359 24 0 0 0 chr10 8992897 8992921 -131323844 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 150 0 chr10 8993013 8993093 -131323672 - MLT1D-int LTR MaLR -274 1097 1006 828 275 34 0 chr10 8993307 8993514 -131323251 - MLT1D-int LTR MaLR -493 878 665 1941 239 39 41 chr10 8993563 8994198 -131322567 - MLT1D-int LTR MaLR -711 660 27 260 188 0 0 chr10 8994207 8994255 -131322510 - MLT1D-int LTR MaLR -1323 48 1 * 2066 217 58 6 chr10 8994255 8994735 -131322030 - MLT1D LTR MaLR 0 505 1 447 285 62 7 chr10 8994735 8994999 -131321766 + L1MEd LINE L1 2112 2393 -4003 274 265 103 0 chr10 8994973 8995109 -131321656 + L1MEd LINE L1 2204 2353 -3862 * 543 275 103 31 chr10 8995083 8995443 -131321322 + L1MEd LINE L1 2204 2589 -3626 394 264 42 36 chr10 8995420 8995613 -131321152 + L1ME3A LINE L1 1455 1648 -4748 * 198 71 0 0 chr10 8995639 8995667 -131321098 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 265 100 29 chr10 8995797 8995967 -131320798 + L1ME3A LINE L1 3759 3940 -2275 333 303 179 6 chr10 8995970 8996132 -131320633 + MLT1J1 LTR MaLR 13 202 -244 1119 286 26 47 chr10 8996945 8997602 -131319163 + L1ME3A LINE L1 4694 5336 -879 192 179 0 0 chr10 8997645 8997684 -131319081 + (TA)n Simple_repeat Simple_repeat 2 40 0 549 313 61 16 chr10 8997706 8998016 -131318749 + L1ME3A LINE L1 5383 5706 -527 180 0 0 0 chr10 8998020 8998040 -131318725 + (TG)n Simple_repeat Simple_repeat 2 21 0 283 191 55 9 chr10 8998051 8998161 -131318604 + (TA)n Simple_repeat Simple_repeat 1 115 0 623 260 23 6 chr10 8998178 8998355 -131318410 + L1ME3A LINE L1 5759 5938 -301 480 235 43 9 chr10 8998714 8998829 -131317936 - MER20 DNA MER1_type -4 215 97 253 254 0 15 chr10 8999345 8999412 -131317353 + CT-rich Low_complexity Low_complexity 1 66 0 237 386 101 6 chr10 8999865 9000023 -131316742 + MIR SINE MIR 39 211 -51 321 26 0 0 chr10 9000566 9000604 -131316161 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr10 9002925 9002948 -131313817 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr10 9004857 9004904 -131311861 + AT_rich Low_complexity Low_complexity 1 47 0 26 74 0 0 chr10 9007303 9007357 -131309408 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 9007402 9007441 -131309324 + AT_rich Low_complexity Low_complexity 1 39 0 583 292 71 40 chr10 9007947 9008173 -131308592 - MIR SINE MIR 0 262 30 285 167 0 0 chr10 9010571 9010625 -131306140 + (TG)n Simple_repeat Simple_repeat 1 54 0 222 37 0 0 chr10 9012215 9012242 -131304523 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1946 132 6 10 chr10 9012675 9012986 -131303779 - AluSg SINE Alu 0 310 1 245 323 42 31 chr10 9013544 9013640 -131303125 - MIR SINE MIR -62 146 50 468 0 0 0 chr10 9013871 9013923 -131302842 + (TTA)n Simple_repeat Simple_repeat 3 54 0 934 94 0 0 chr10 9013923 9014050 -131302715 - L1PA7 LINE L1 -18 6136 6010 702 346 115 40 chr10 9017793 9018516 -131298249 + L1MEd LINE L1 189 965 -5154 245 310 19 107 chr10 9018919 9019180 -131297585 + L1MEd LINE L1 488 725 -5394 1975 230 65 8 chr10 9019302 9019794 -131296971 - MLT2B1 LTR ERVL 0 520 1 435 300 39 58 chr10 9019881 9020546 -131296219 + L1MEd LINE L1 925 1616 -874 519 301 14 0 chr10 9020547 9020693 -131296072 - MLT1H LTR MaLR -315 234 87 2191 121 3 3 chr10 9020833 9021138 -131295627 + AluY SINE Alu 1 305 -6 324 270 111 11 chr10 9021139 9021328 -131295437 + L1ME3A LINE L1 5730 5937 -233 298 277 138 31 chr10 9021576 9021867 -131294898 + L1ME LINE L1 5463 5588 -533 38 51 0 0 chr10 9023067 9023126 -131293639 + AT_rich Low_complexity Low_complexity 1 59 0 338 295 47 31 chr10 9023705 9023834 -131292931 + MIR SINE MIR 129 259 -3 657 102 0 0 chr10 9023865 9023963 -131292802 - AluY SINE Alu -12 299 202 2010 80 0 28 chr10 9024120 9024407 -131292358 - L1PA13 LINE L1 -11 6152 5874 1239 63 0 0 chr10 9024407 9024565 -131292200 + L1P4 LINE L1 5649 5806 -362 666 173 126 136 chr10 9025371 9025399 -131291366 - L1M4 LINE L1 -1792 4852 4825 225 65 0 0 chr10 9025399 9025430 -131291335 + (TA)n Simple_repeat Simple_repeat 1 31 0 666 173 126 136 chr10 9025430 9025702 -131291063 - L1M4 LINE L1 -1819 4825 4555 1544 231 29 21 chr10 9025718 9025848 -131290917 + MLT2C1 LTR ERVL 3 130 -267 1530 96 50 0 chr10 9025848 9026066 -131290699 - MER30 DNA MER1_type 0 230 2 1544 231 29 21 chr10 9026066 9026321 -131290444 + MLT2C1 LTR ERVL 130 391 -6 2282 248 56 20 chr10 9026329 9027118 -131289647 - L1M4 LINE L1 -2105 4539 3723 1441 156 86 78 chr10 9027408 9027780 -131288985 - THE1C LTR MaLR 0 375 1 554 258 66 56 chr10 9027831 9028118 -131288647 - L1M4 LINE L1 -6229 313 24 365 197 2 0 chr10 9028120 9028191 -131288574 + MLT1H1 LTR MaLR 476 553 -2 584 282 115 16 chr10 9028343 9028666 -131288099 + MER20B DNA MER1_type 406 760 -23 2359 102 0 0 chr10 9028695 9028998 -131287767 - AluSc SINE Alu -6 303 1 2330 11 0 0 chr10 9029190 9029455 -131287310 - L1PA2 LINE L1 0 6155 5891 2087 125 0 3 chr10 9029774 9030097 -131286668 + AluSq SINE Alu 1 322 0 291 312 186 10 chr10 9030198 9030595 -131286170 - LTR33 LTR ERVL -36 485 19 1688 171 54 6 chr10 9030908 9031224 -131285541 - MER7A DNA MER2_type -17 329 1 1150 273 85 65 chr10 9033760 9034325 -131282440 - L1ME3A LINE L1 -11 6159 5584 195 42 0 0 chr10 9035757 9035781 -131280984 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1111 231 148 13 chr10 9036014 9036317 -131280448 + MER2 DNA MER2_type 2 345 0 503 115 0 0 chr10 9036332 9036410 -131280355 + MADE1 DNA Mariner 1 78 -2 441 278 87 76 chr10 9036470 9036948 -131279817 - L2 LINE L2 -224 3089 2581 1981 136 0 14 chr10 9036948 9037274 -131279491 - AluSx SINE Alu 0 322 1 441 278 87 76 chr10 9037274 9037329 -131279436 - L2 LINE L2 -732 2581 2528 2197 119 0 3 chr10 9037336 9037638 -131279127 - AluSq SINE Alu -12 301 1 425 244 15 15 chr10 9037722 9037853 -131278912 + LTR33 LTR ERVL 388 518 -3 249 227 121 0 chr10 9037856 9037922 -131278843 + L2 LINE L2 3199 3272 0 4213 67 5 2 chr10 9038473 9039025 -131277740 + MER41A LTR ERV1 1 554 0 255 61 0 0 chr10 9039524 9039557 -131277208 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 580 188 27 0 chr10 9039643 9039826 -131276939 + L1PA16 LINE L1 5936 6158 -8 23 33 0 0 chr10 9039826 9039856 -131276909 + AT_rich Low_complexity Low_complexity 1 30 0 499 204 10 0 chr10 9040518 9040616 -131276149 - LTR9 LTR ERV1 0 612 514 2870 159 12 55 chr10 9040864 9041442 -131275323 - LTR9 LTR ERV1 -57 555 3 2938 279 63 23 chr10 9042626 9043980 -131272785 + L1ME1 LINE L1 34 1442 -4954 1608 210 108 50 chr10 9044026 9044546 -131272219 - MLT1E1 LTR MaLR -10 644 95 2628 248 76 61 chr10 9044642 9045945 -131270820 + L1ME1 LINE L1 3690 5012 -1203 2193 260 40 12 chr10 9045936 9046727 -131270038 + L1ME1 LINE L1 5347 6223 -12 * 237 270 16 0 chr10 9047052 9047115 -131269650 + L2 LINE L2 3245 3308 -5 297 324 9 9 chr10 9047311 9047416 -131269349 - MIR SINE MIR -39 223 119 5716 136 29 20 chr10 9047446 9047524 -131269241 - L1MA8 LINE L1 0 6291 6215 2158 132 0 0 chr10 9047524 9047827 -131268938 + AluSx SINE Alu 1 303 -9 5716 136 29 20 chr10 9047827 9048848 -131267917 - L1MA8 LINE L1 -76 6215 5183 241 281 52 52 chr10 9050833 9050968 -131265797 - L2 LINE L2 -18 3295 3161 1434 191 44 49 chr10 9051195 9051561 -131265204 + MLT1A1 LTR MaLR 2 365 0 229 171 157 29 chr10 9052013 9052083 -131264682 - L2 LINE L2 -2 3311 3233 24 53 0 0 chr10 9052396 9052434 -131264331 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr10 9052600 9052649 -131264116 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 118 0 0 chr10 9052648 9052682 -131264083 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 245 401 31 0 chr10 9053907 9054025 -131262740 + MIR SINE MIR 46 165 -65 212 328 143 17 chr10 9054040 9054159 -131262606 - MIR SINE MIR -83 179 46 2230 101 3 0 chr10 9054538 9054835 -131261930 + AluSp SINE Alu 1 298 -15 261 83 0 0 chr10 9055424 9055460 -131261305 + (A)n Simple_repeat Simple_repeat 1 36 0 348 24 0 0 chr10 9056297 9056338 -131260427 + (TC)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr10 9056499 9056531 -131260234 + AT_rich Low_complexity Low_complexity 1 32 0 206 32 32 0 chr10 9058416 9058447 -131258318 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 9059490 9059513 -131257252 + (TA)n Simple_repeat Simple_repeat 1 23 0 25 0 0 0 chr10 9059513 9059538 -131257227 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 9060259 9060287 -131256478 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 9060389 9060425 -131256340 + AT_rich Low_complexity Low_complexity 1 36 0 329 259 89 13 chr10 9061072 9061296 -131255469 + L1M4 LINE L1 2800 3040 -3106 28 48 0 0 chr10 9061411 9061453 -131255312 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr10 9061722 9061767 -131254998 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 2549 61 0 6 chr10 9062183 9062496 -131254269 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 9062507 9062529 -131254236 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 9062839 9062861 -131253904 + (A)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr10 9064233 9064257 -131252508 + AT_rich Low_complexity Low_complexity 1 24 0 225 311 11 0 chr10 9064676 9064766 -131251999 + MIR SINE MIR 120 210 -52 626 226 0 8 chr10 9065015 9065139 -131251626 - FLAM_A SINE Alu -10 123 1 227 347 0 14 chr10 9067667 9067739 -131249026 + MIR SINE MIR 78 148 -60 1606 191 3 27 chr10 9068248 9068546 -131248219 + AluJo SINE Alu 1 291 -21 349 223 45 36 chr10 9068572 9068684 -131248081 - MER112 DNA MER1_type -11 249 137 273 269 36 102 chr10 9069298 9069465 -131247300 + MIR SINE MIR 59 214 -48 2008 167 80 82 chr10 9070055 9070570 -131246195 - MLT2B1 LTR ERVL -1 519 6 391 83 0 0 chr10 9070741 9070801 -131245964 - L1MA3 LINE L1 -4 6301 6242 5088 60 0 6 chr10 9071263 9071915 -131244850 + L1PA8 LINE L1 5521 6168 -4 2363 66 0 13 chr10 9072418 9072721 -131244044 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 9072763 9072794 -131243971 + AT_rich Low_complexity Low_complexity 1 31 0 1001 113 251 0 chr10 9072795 9072998 -131243767 - L1MA3 LINE L1 -1 6304 6051 377 320 96 6 chr10 9073913 9074091 -131242674 + MIR SINE MIR 66 259 -3 976 232 122 41 chr10 9076318 9076955 -131239810 - HAL1 LINE L1 -874 1633 945 474 308 180 31 chr10 9076966 9077515 -131239250 - HAL1 LINE L1 -1729 778 148 2848 202 58 68 chr10 9077683 9078564 -131238201 + L1MB5 LINE L1 5294 6165 -9 1846 118 0 4 chr10 9079283 9079528 -131237237 + AluSq SINE Alu 37 280 -33 225 0 0 0 chr10 9079528 9079553 -131237212 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 33 25 0 0 chr10 9079769 9079809 -131236956 + AT_rich Low_complexity Low_complexity 1 40 0 451 370 106 12 chr10 9079916 9080246 -131236519 - L3 LINE CR1 -18 1559 1199 226 385 113 9 chr10 9080326 9080539 -131236226 - L3 LINE CR1 -839 738 504 22 0 0 0 chr10 9080571 9080593 -131236172 + AT_rich Low_complexity Low_complexity 1 22 0 197 357 14 0 chr10 9080828 9080898 -131235867 - MIR3 SINE MIR -49 159 89 344 238 88 103 chr10 9080909 9081170 -131235595 + L1MEc LINE L1 2076 2332 -4064 263 253 98 55 chr10 9081656 9082055 -131234710 + L1MEc LINE L1 2879 3294 -2921 335 318 56 28 chr10 9082460 9082819 -131233946 + L1MEc LINE L1 3808 4176 -2039 201 153 17 34 chr10 9083376 9083435 -131233330 + A-rich Low_complexity Low_complexity 3 60 0 23 54 0 0 chr10 9083689 9083726 -131233039 + AT_rich Low_complexity Low_complexity 1 37 0 226 345 12 24 chr10 9083779 9083863 -131232902 - MIR SINE MIR -89 119 37 2339 163 16 0 chr10 9083943 9084379 -131232386 + L1MA7 LINE L1 5830 6272 -19 1521 104 62 134 chr10 9085869 9086176 -131230589 - AluSx SINE Alu -17 295 11 2017 136 0 0 chr10 9087588 9087895 -131228870 + AluSq SINE Alu 1 307 0 1408 175 0 0 chr10 9088173 9088396 -131228369 - AluSg/x SINE Alu -8 304 82 186 245 21 11 chr10 9088798 9088892 -131227873 + (TA)n Simple_repeat Simple_repeat 1 95 0 318 312 0 37 chr10 9088898 9089007 -131227758 + L1MC4 LINE L1 6614 6718 -1324 270 310 60 40 chr10 9089096 9089243 -131227522 + MIR SINE MIR 33 172 -63 302 250 21 52 chr10 9089338 9089434 -131227331 - MIR3 SINE MIR -35 173 81 437 311 87 78 chr10 9089721 9090299 -131226466 - L2 LINE L2 -546 2768 2186 540 272 29 4 chr10 9090967 9091149 -131225616 + MIR SINE MIR 30 213 -49 230 56 28 0 chr10 9093765 9093801 -131222964 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1103 116 12 0 chr10 9093806 9093970 -131222795 - AluSg/x SINE Alu -2 308 143 228 188 0 62 chr10 9094527 9094591 -131222174 + T-rich Low_complexity Low_complexity 1 60 0 180 200 0 0 chr10 9095514 9095554 -131221211 + CT-rich Low_complexity Low_complexity 1 40 0 206 362 32 0 chr10 9095785 9095879 -131220886 + MIR SINE MIR 43 139 -69 7553 23 1 3 chr10 9096419 9097828 -131218937 - L1PA4 LINE L1 -3 6152 4744 533 238 73 6 chr10 9098226 9098390 -131218375 + L1M4 LINE L1 4804 4978 -1168 23 33 0 0 chr10 9098758 9098788 -131217977 + AT_rich Low_complexity Low_complexity 1 30 0 33 25 0 0 chr10 9098869 9098909 -131217856 + AT_rich Low_complexity Low_complexity 1 40 0 40 21 0 0 chr10 9099122 9099169 -131217596 + AT_rich Low_complexity Low_complexity 1 47 0 220 205 0 0 chr10 9100404 9100443 -131216322 + CT-rich Low_complexity Low_complexity 3 41 0 320 229 83 28 chr10 9101229 9101338 -131215427 + MIR SINE MIR 30 144 -118 9358 34 16 138 chr10 9101450 9102909 -131213856 + SVA Other Other 15 1296 -90 2565 195 16 56 chr10 9103057 9103918 -131212847 + L1 LINE L1 4416 5242 -904 1588 147 4 0 chr10 9104241 9104479 -131212286 + AluSg/x SINE Alu 74 312 0 854 177 40 17 chr10 9104521 9104696 -131212069 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 9104681 9104742 -131212023 + MER41A LTR ERV1 403 464 -90 * 430 16 0 0 chr10 9105566 9105628 -131211137 + AluY SINE Alu 249 310 0 437 237 108 21 chr10 9107486 9107680 -131209085 - L1MC4 LINE L1 -2 8040 7830 1001 161 28 0 chr10 9108974 9109154 -131207611 + MER5A DNA MER1_type 5 189 0 439 290 167 5 chr10 9112949 9113135 -131203630 - MIR SINE MIR 0 262 47 683 259 52 4 chr10 9114089 9114321 -131202444 + L1MEc LINE L1 36 278 -6118 1214 190 51 63 chr10 9115472 9115867 -131200898 + MLT1B LTR MaLR 1 390 0 250 188 12 35 chr10 9116707 9116831 -131199934 + (TTTA)n Simple_repeat Simple_repeat 1 121 0 26 50 0 0 chr10 9116912 9116952 -131199813 + AT_rich Low_complexity Low_complexity 1 40 0 975 94 22 22 chr10 9117197 9117378 -131199387 + SVA Other Other 687 867 -519 6283 59 30 56 chr10 9117390 9118376 -131198389 + SVA Other Other 430 1390 0 236 304 43 0 chr10 9118950 9119019 -131197746 + MIR SINE MIR 31 102 -106 263 109 0 22 chr10 9119302 9119348 -131197417 - L1PA8 LINE L1 -12 6160 6116 2176 55 0 0 chr10 9119308 9119579 -131197186 - L1PA5 LINE L1 -17 6137 5867 23 0 0 0 chr10 9119597 9119620 -131197145 + AT_rich Low_complexity Low_complexity 1 23 0 2378 102 6 0 chr10 9120481 9120823 -131195942 - L1PA13 LINE L1 -2 6161 5818 210 145 0 48 chr10 9120942 9121004 -131195761 + (TAAAAA)n Simple_repeat Simple_repeat 1 59 0 344 0 71 0 chr10 9123439 9123495 -131193270 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 75 0 0 chr10 9125326 9125366 -131191399 + (CA)n Simple_repeat Simple_repeat 1 40 0 984 268 32 52 chr10 9126555 9126958 -131189807 - MLT2C1 LTR ERVL -2 395 1 911 154 0 30 chr10 9127306 9127475 -131189290 + FRAM SINE Alu 1 164 -2 233 234 182 0 chr10 9127627 9127704 -131189061 - L1MA10 LINE L1 -8 6326 6236 2541 240 56 34 chr10 9127717 9129361 -131187404 - L1ME1 LINE L1 -117 6118 4443 1122 270 41 34 chr10 9129397 9129838 -131186927 + L1MCb LINE L1 1 444 -5601 776 267 49 4 chr10 9129837 9130084 -131186681 - L1ME1 LINE L1 -6103 293 36 * 21 57 0 0 chr10 9130447 9130482 -131186283 + AT_rich Low_complexity Low_complexity 1 35 0 206 407 47 0 chr10 9130504 9130590 -131186175 + L2 LINE L2 3140 3229 -43 2018 133 0 3 chr10 9130617 9130910 -131185855 - AluSx SINE Alu -7 305 14 23 33 0 0 chr10 9132410 9132440 -131184325 + AT_rich Low_complexity Low_complexity 1 30 0 333 268 114 24 chr10 9132542 9132665 -131184100 - L2 LINE L2 -4 3309 3176 206 208 47 104 chr10 9132725 9132831 -131183934 - L2 LINE L2 0 3313 3214 778 234 38 28 chr10 9133043 9133260 -131183505 - MLT2B2 LTR ERVL 0 515 250 688 192 68 64 chr10 9133260 9133522 -131183243 + L1MC3 LINE L1 2335 2641 -3966 2037 122 3 7 chr10 9133522 9133818 -131182947 + AluSc SINE Alu 1 295 -14 688 192 68 64 chr10 9133818 9133913 -131182852 + L1MC3 LINE L1 2641 2734 -3873 186 118 0 0 chr10 9133921 9133955 -131182810 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1365 221 18 49 chr10 9133955 9134443 -131182322 + L1MC3 LINE L1 3074 3546 -2880 * 10090 212 41 37 chr10 9134432 9138508 -131178257 + L1MC3 LINE L1 3969 8057 -8 1670 124 4 4 chr10 9138900 9139142 -131177623 + AluSc SINE Alu 1 242 -67 2196 216 17 4 chr10 9139382 9139854 -131176911 - MER66A LTR ERV1 0 478 1 1799 139 33 0 chr10 9140925 9141198 -131175567 - AluSx SINE Alu -28 284 3 379 262 122 67 chr10 9142013 9142177 -131174588 - MLT1J2 LTR MaLR -240 210 38 371 403 35 30 chr10 9142554 9142785 -131173980 - MIR SINE MIR -21 241 10 283 243 14 29 chr10 9143116 9143186 -131173579 - L2 LINE L2 -1 3312 3244 1594 110 27 11 chr10 9143381 9143644 -131173121 - L1PA13 LINE L1 -4 6159 5893 280 243 57 0 chr10 9143983 9144053 -131172712 + MIR SINE MIR 56 129 -79 1386 111 9 18 chr10 9144507 9144732 -131172033 + L1PA10 LINE L1 5942 6164 -4 5085 135 11 7 chr10 9145224 9146052 -131170713 - L1PA16 LINE L1 -10 6156 5326 212 0 36 0 chr10 9146180 9146208 -131170557 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 2150 87 0 17 chr10 9148072 9148359 -131168406 - AluSg SINE Alu -28 282 1 489 279 16 0 chr10 9148360 9148482 -131168283 + MIR SINE MIR 63 186 -76 234 339 101 9 chr10 9148581 9148690 -131168075 + L2 LINE L2 3148 3266 -6 22 0 0 0 chr10 9149191 9149213 -131167552 + AT_rich Low_complexity Low_complexity 1 22 0 257 313 81 0 chr10 9149641 9149740 -131167025 + L2 LINE L2 3200 3306 -7 1797 222 76 40 chr10 9149888 9150053 -131166712 - L1MC4 LINE L1 -178 7864 7706 1687 170 0 42 chr10 9150053 9150359 -131166406 - AluJo SINE Alu -17 295 3 1797 222 76 40 chr10 9150359 9150770 -131165995 - L1MC4 LINE L1 -336 7706 7267 399 232 1 24 chr10 9150785 9150885 -131165880 - L1MC4 LINE L1 -720 7293 7183 45 62 0 0 chr10 9151202 9151282 -131165483 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr10 9153328 9153357 -131163408 + AT_rich Low_complexity Low_complexity 1 29 0 3147 52 7 7 chr10 9154222 9154629 -131162136 + L1PA7 LINE L1 5737 6143 -11 22 56 0 0 chr10 9154629 9154665 -131162100 + AT_rich Low_complexity Low_complexity 1 36 0 256 326 56 11 chr10 9155223 9155312 -131161453 - L2 LINE L2 0 3272 3180 226 326 81 0 chr10 9155435 9155521 -131161244 + L2 LINE L2 3220 3312 -1 1886 95 56 0 chr10 9156532 9156817 -131159948 + L1PA10 LINE L1 5863 6163 -5 279 324 0 0 chr10 9157461 9157529 -131159236 - L2 LINE L2 0 3313 3246 21 57 0 0 chr10 9158364 9158399 -131158366 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr10 9160327 9160350 -131156415 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr10 9161347 9161394 -131155371 + AT_rich Low_complexity Low_complexity 1 47 0 1595 166 0 11 chr10 9161416 9161730 -131155035 - AluJb SINE Alu 0 327 17 991 164 36 41 chr10 9162396 9162615 -131154150 - AluJo SINE Alu -9 303 86 2266 233 34 12 chr10 9162774 9163370 -131153395 - L1MC4a LINE L1 -155 7653 7045 231 36 0 0 chr10 9163384 9163412 -131153353 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2242 26 7 0 chr10 9163472 9163742 -131153023 - L1PA4 LINE L1 -3 6152 5881 857 236 107 23 chr10 9164373 9164921 -131151844 + L1MD2 LINE L1 5528 6161 -5 2910 156 20 0 chr10 9164943 9165444 -131151321 + L1PB4 LINE L1 5639 6149 -7 352 281 59 39 chr10 9165738 9165891 -131150874 - L2 LINE L2 0 3313 3158 1992 122 95 12 chr10 9166172 9166508 -131150257 + THE1B LTR MaLR 1 364 0 1413 186 80 0 chr10 9166560 9166848 -131149917 - AluJb SINE Alu 0 309 1 330 298 108 25 chr10 9166848 9167006 -131149759 + MIR SINE MIR 35 205 -57 311 222 32 0 chr10 9167573 9167636 -131149129 - L2 LINE L2 0 3313 3249 285 310 85 101 chr10 9167742 9168000 -131148765 - L2 LINE L2 -5 3267 3014 1065 151 0 0 chr10 9168466 9168632 -131148133 - AluSg/x SINE Alu -2 310 145 2330 73 0 3 chr10 9168841 9169141 -131147624 - AluSc SINE Alu -9 300 2 497 237 21 156 chr10 9169376 9169659 -131147106 - MIR SINE MIR -2 260 16 194 269 118 32 chr10 9170866 9170959 -131145806 - MIR SINE MIR 0 262 162 238 318 15 0 chr10 9172121 9172187 -131144578 - L2 LINE L2 -1 3271 3205 2116 125 42 28 chr10 9172212 9172571 -131144194 - THE1B LTR MaLR 0 364 1 376 233 41 34 chr10 9172783 9173033 -131143732 + MLT1H1 LTR MaLR 120 376 -214 186 337 105 0 chr10 9173222 9173317 -131143448 + MIR SINE MIR 71 175 -87 870 184 38 160 chr10 9173363 9173463 -131143302 + MER33 DNA MER1_type 1 112 -2473 1935 144 9 3 chr10 9173463 9173803 -131142962 + L1MA2 LINE L1 5963 6304 0 870 184 38 160 chr10 9173803 9174071 -131142694 + MER33 DNA MER1_type 112 324 0 4105 132 9 0 chr10 9174177 9174829 -131141936 - L1MA2 LINE L1 -15 6289 5632 1675 97 132 8 chr10 9175029 9175287 -131141478 - AluSx SINE Alu -22 290 1 22 99 0 0 chr10 9175926 9175997 -131140768 + AT_rich Low_complexity Low_complexity 1 71 0 225 159 0 0 chr10 9177621 9177665 -131139100 + (TG)n Simple_repeat Simple_repeat 2 45 0 293 186 29 43 chr10 9177857 9177927 -131138838 - L1ME4a LINE L1 -69 6052 5984 746 334 97 45 chr10 9178156 9178662 -131138103 - L2 LINE L2 -31 3282 2804 1647 167 7 33 chr10 9178662 9178968 -131137797 - AluJo SINE Alu -13 299 2 746 334 97 45 chr10 9178968 9179243 -131137522 - L2 LINE L2 -509 2804 2451 1255 175 54 35 chr10 9179243 9179557 -131137208 - MER33 DNA MER1_type 0 324 5 746 334 97 45 chr10 9179557 9179733 -131137032 - L2 LINE L2 -862 2451 2286 328 315 68 25 chr10 9179737 9180058 -131136707 - L1ME4a LINE L1 -304 5817 5483 269 377 51 55 chr10 9180900 9181391 -131135374 - L2 LINE L2 -340 2974 2486 389 161 11 0 chr10 9181752 9181839 -131134926 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1301 197 38 112 chr10 9182106 9182527 -131134238 - MLT1B LTR MaLR 0 390 1 2075 109 0 3 chr10 9182533 9182836 -131133929 + AluSq SINE Alu 1 302 0 314 274 9 19 chr10 9182853 9182959 -131133806 + (TATATG)n Simple_repeat Simple_repeat 2 106 0 780 103 46 17 chr10 9183520 9183695 -131133070 + CT-rich Low_complexity Low_complexity 1 180 0 2055 108 16 10 chr10 9183708 9184014 -131132751 - AluSg SINE Alu -1 309 2 2865 240 68 48 chr10 9184060 9184111 -131132654 - L1ME1 LINE L1 -5 6161 6113 1176 183 99 56 chr10 9184111 9184433 -131132332 - MER44D DNA MER2_type -2 607 2 2865 240 68 48 chr10 9184433 9185822 -131130943 - L1ME1 LINE L1 -53 6113 4687 195 360 114 0 chr10 9185839 9185953 -131130812 - MIR SINE MIR -26 236 110 4914 236 50 50 chr10 9185986 9188166 -131128599 + L1MDa LINE L1 889 3158 -3382 4045 167 6 4 chr10 9188166 9188868 -131127897 - L1PA16 LINE L1 -1 6165 5463 4914 236 50 50 chr10 9188868 9190009 -131126756 + L1MDa LINE L1 3158 4297 -2243 1385 148 4 18 chr10 9190009 9190238 -131126527 - AluJb SINE Alu -86 226 1 1016 246 54 22 chr10 9190265 9190542 -131126223 + L1MDa LINE L1 4346 4631 -1909 498 146 64 27 chr10 9190551 9190661 -131126104 + L1MD2 LINE L1 6246 6359 0 496 44 0 0 chr10 9190679 9190768 -131125997 + L1PA3 LINE L1 6087 6175 0 25 83 0 0 chr10 9191234 9191294 -131125471 + AT_rich Low_complexity Low_complexity 1 60 0 263 323 31 8 chr10 9191330 9191460 -131125305 + L1MEc LINE L1 70 202 -6194 349 329 40 22 chr10 9191798 9192026 -131124739 + L1MEc LINE L1 638 869 -5527 210 71 0 0 chr10 9192192 9192220 -131124545 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 883 318 112 33 chr10 9192619 9193191 -131123574 - L2 LINE L2 -577 2737 2121 2680 186 40 20 chr10 9193645 9194252 -131122513 - L1 LINE L1 -1902 4244 3626 438 250 35 0 chr10 9195758 9195874 -131120891 - MER94 DNA DNA -12 122 3 2866 130 77 83 chr10 9195933 9196572 -131120193 + MER41B LTR ERV1 1 635 0 23 0 0 0 chr10 9197808 9197831 -131118934 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 9198952 9198977 -131117788 + AT_rich Low_complexity Low_complexity 1 25 0 951 88 15 0 chr10 9199006 9199143 -131117622 - L1PB2 LINE L1 -7 6144 6006 1511 182 19 4 chr10 9199143 9199407 -131117358 - AluJb SINE Alu -44 268 1 403 348 82 16 chr10 9200198 9200442 -131116323 - MIR SINE MIR 0 262 3 303 28 0 0 chr10 9201843 9201879 -131114886 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 22 35 0 0 chr10 9202680 9202709 -131114056 + AT_rich Low_complexity Low_complexity 1 29 0 4960 79 138 18 chr10 9203008 9203203 -131113562 + L1PA10 LINE L1 5298 5468 -700 2112 128 3 0 chr10 9203203 9203499 -131113266 + AluSq SINE Alu 1 297 -16 4960 79 138 18 chr10 9203499 9204079 -131112686 + L1PA10 LINE L1 5468 6166 -2 212 200 22 0 chr10 9204297 9204342 -131112423 + A-rich Low_complexity Low_complexity 5 50 0 207 213 21 21 chr10 9204556 9204603 -131112162 - L2 LINE L2 -2 3311 3265 423 202 0 0 chr10 9204978 9205087 -131111678 + (CA)n Simple_repeat Simple_repeat 2 110 0 1239 241 116 7 chr10 9205539 9205953 -131110812 - MLT1C LTR MaLR -8 459 1 858 88 0 0 chr10 9206528 9206687 -131110078 - L1PA8 LINE L1 -11 6161 6027 1750 131 53 3 chr10 9206790 9206915 -131109850 + AluSx SINE Alu 1 118 -194 459 0 0 0 chr10 9206915 9206966 -131109799 + (CA)n Simple_repeat Simple_repeat 2 52 0 1750 131 53 3 chr10 9206966 9207122 -131109643 + AluSx SINE Alu 118 296 -16 396 286 127 45 chr10 9207181 9207426 -131109339 + L1ME LINE L1 5408 5672 -449 247 211 0 0 chr10 9207490 9207542 -131109223 + L1ME LINE L1 5757 5808 -356 468 197 0 63 chr10 9207703 9207830 -131108935 + L1ME1 LINE L1 4562 4680 -1466 2010 135 0 3 chr10 9207913 9208250 -131108515 + AluSq SINE Alu 1 313 0 242 240 80 0 chr10 9208496 9208596 -131108169 + L1ME1 LINE L1 5122 5229 -917 391 317 88 4 chr10 9208615 9208877 -131107888 + L1M2 LINE L1 5256 5539 -761 383 256 74 17 chr10 9208873 9209049 -131107716 + L1ME1 LINE L1 5711 5896 -274 * 1061 228 26 98 chr10 9209083 9209469 -131107296 - MLT1A2 LTR MaLR -16 358 1 6394 89 4 2 chr10 9211194 9212219 -131104546 + L1PA14 LINE L1 5121 6156 -5 22 0 0 0 chr10 9212225 9212247 -131104518 + AT_rich Low_complexity Low_complexity 1 22 0 324 269 53 58 chr10 9212465 9212636 -131104129 + MLT1J2 LTR MaLR 280 449 -1 286 369 114 23 chr10 9212683 9212946 -131103819 + L3 LINE CR1 68 354 -1223 233 325 117 8 chr10 9213254 9213374 -131103391 - MIR SINE MIR -129 133 1 1786 296 143 11 chr10 9213971 9214687 -131102078 - L2 LINE L2 -446 2868 2059 21 0 0 0 chr10 9215051 9215072 -131101693 + AT_rich Low_complexity Low_complexity 1 21 0 1497 122 0 14 chr10 9216771 9216985 -131099780 - AluSg SINE Alu -99 211 1 24 53 0 0 chr10 9216992 9217030 -131099735 + AT_rich Low_complexity Low_complexity 1 38 0 180 313 91 40 chr10 9217041 9217140 -131099625 - L3b LINE CR1 -189 1394 1291 545 288 9 39 chr10 9217221 9217285 -131099480 + L1ME1 LINE L1 5919 5983 -183 2249 146 5 19 chr10 9217285 9217654 -131099111 - THE1B LTR MaLR 0 364 1 545 288 9 39 chr10 9217654 9217822 -131098943 + L1ME1 LINE L1 5983 6144 -22 247 215 9 28 chr10 9217838 9217945 -131098820 + (TA)n Simple_repeat Simple_repeat 2 106 0 384 302 145 35 chr10 9218405 9218660 -131098105 + MLT1I LTR MaLR 21 303 -106 1346 278 16 5 chr10 9218669 9219051 -131097714 - L2 LINE L2 -693 2621 2236 632 325 43 9 chr10 9222028 9222259 -131094506 + MIR SINE MIR 24 262 0 2079 143 0 6 chr10 9222383 9222697 -131094068 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 9222824 9222852 -131093913 + (TA)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 9222997 9223017 -131093748 + (TG)n Simple_repeat Simple_repeat 2 21 0 2089 138 0 0 chr10 9223364 9223655 -131093110 - AluSx SINE Alu -20 292 2 524 154 24 49 chr10 9223936 9224059 -131092706 - L1MC2 LINE L1 0 6344 6225 466 284 100 15 chr10 9224390 9224661 -131092104 + LTR33A LTR ERVL 230 523 0 261 0 0 0 chr10 9224710 9224739 -131092026 + (A)n Simple_repeat Simple_repeat 1 29 0 306 254 56 63 chr10 9225268 9225394 -131091371 + L2 LINE L2 3189 3313 0 789 205 0 26 chr10 9225538 9225694 -131091071 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr10 9226650 9226672 -131090093 + AT_rich Low_complexity Low_complexity 1 22 0 308 240 124 41 chr10 9228152 9228273 -131088492 - MIR SINE MIR -62 200 70 216 354 0 76 chr10 9228318 9228462 -131088303 + L2 LINE L2 3139 3271 -1 734 172 0 51 chr10 9229589 9229746 -131087019 + AluJo SINE Alu 39 187 -125 194 105 26 0 chr10 9230740 9230778 -131085987 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2089 124 0 3 chr10 9230999 9231289 -131085476 - AluSg SINE Alu -21 289 1 5009 32 0 0 chr10 9232058 9232656 -131084109 - L1PA3 LINE L1 -1046 5100 4503 7835 14 0 0 chr10 9232656 9233680 -131083085 + L1PA3 LINE L1 5132 6155 0 626 37 86 12 chr10 9233865 9234020 -131082745 + (TA)n Simple_repeat Simple_repeat 1 170 -4 1712 161 4 18 chr10 9234020 9234299 -131082466 - AluJb SINE Alu -37 275 1 626 37 86 12 chr10 9234299 9234305 -131082460 + (TA)n Simple_repeat Simple_repeat 170 174 0 25 51 0 0 chr10 9236897 9236936 -131079829 + AT_rich Low_complexity Low_complexity 1 39 0 201 211 0 0 chr10 9237299 9237351 -131079414 + GA-rich Low_complexity Low_complexity 2 53 0 380 111 44 0 chr10 9237985 9238075 -131078690 + (TA)n Simple_repeat Simple_repeat 1 94 0 241 295 62 36 chr10 9238198 9238310 -131078455 - MIR SINE MIR -48 214 100 29 0 0 0 chr10 9239608 9239637 -131077128 + AT_rich Low_complexity Low_complexity 1 29 0 2601 161 9 17 chr10 9240096 9240562 -131076203 + MLT1C LTR MaLR 1 462 -5 181 296 0 0 chr10 9240905 9240949 -131075816 + MIR3 SINE MIR 116 159 -49 392 0 21 0 chr10 9241241 9241289 -131075476 + (TG)n Simple_repeat Simple_repeat 2 50 0 3001 196 41 17 chr10 9241331 9241983 -131074782 - L1MD1 LINE L1 0 6242 5575 442 266 62 0 chr10 9241984 9242112 -131074653 + L1MD1 LINE L1 5408 5543 -699 2633 226 41 22 chr10 9242261 9242902 -131073863 - MER82 DNA MER2_type 0 653 1 245 218 18 0 chr10 9243071 9243126 -131073639 - L1MC/D LINE L1 -514 5845 5790 2331 83 0 10 chr10 9243175 9243477 -131073288 + AluY SINE Alu 1 299 -12 256 284 12 0 chr10 9245857 9245938 -131070827 + MIR3 SINE MIR 125 206 -2 234 233 0 0 chr10 9246146 9246206 -131070559 + CT-rich Low_complexity Low_complexity 2 61 0 270 294 29 0 chr10 9246213 9246281 -131070484 - L2 LINE L2 -17 3255 3186 2120 122 0 0 chr10 9246305 9246593 -131070172 - AluSx SINE Alu -24 288 1 475 355 59 16 chr10 9246735 9247107 -131069658 - L2 LINE L2 -455 2859 2472 355 312 18 59 chr10 9248243 9248413 -131068352 + L3 LINE CR1 854 1016 -561 1900 139 20 0 chr10 9248663 9248964 -131067801 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 9249338 9249359 -131067406 + AT_rich Low_complexity Low_complexity 1 21 0 2300 50 4 4 chr10 9249791 9250070 -131066695 + AluY SINE Alu 1 279 -32 308 24 0 24 chr10 9250071 9250113 -131066652 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 240 183 73 73 chr10 9250117 9250199 -131066566 - L2 LINE L2 -12 3260 3179 229 70 23 0 chr10 9250217 9250260 -131066505 - Alu SINE Alu 0 300 257 1180 256 61 28 chr10 9250687 9251148 -131065617 + L1M4 LINE L1 2281 2756 -3390 3961 176 6 6 chr10 9251180 9251877 -131064888 - L1PA16 LINE L1 -7 6159 5463 2523 245 52 50 chr10 9251875 9253017 -131063748 + L1M4 LINE L1 2759 3903 -2243 * 1408 148 4 18 chr10 9253017 9253246 -131063519 - AluJb SINE Alu -86 226 1 697 233 24 38 chr10 9253272 9253482 -131063283 + L1M4 LINE L1 3950 4156 -1990 306 185 25 37 chr10 9253559 9253640 -131063125 + L1MD2 LINE L1 6246 6325 -34 405 0 0 0 chr10 9253994 9254039 -131062726 + (TG)n Simple_repeat Simple_repeat 1 45 0 2296 69 10 0 chr10 9254135 9254424 -131062341 - AluY SINE Alu -15 296 5 26 50 0 0 chr10 9254438 9254478 -131062287 + AT_rich Low_complexity Low_complexity 1 40 0 201 288 0 17 chr10 9254626 9254685 -131062080 + CT-rich Low_complexity Low_complexity 4 61 0 34 24 0 0 chr10 9254698 9254739 -131062026 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 9257917 9257940 -131058825 + AT_rich Low_complexity Low_complexity 1 23 0 306 290 113 8 chr10 9258458 9258582 -131058183 + L2 LINE L2 3173 3309 -4 28 29 0 0 chr10 9259002 9259037 -131057728 + AT_rich Low_complexity Low_complexity 1 35 0 407 259 69 8 chr10 9259227 9259358 -131057407 + MIR SINE MIR 124 262 0 297 0 0 0 chr10 9259562 9259595 -131057170 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 336 24 0 0 chr10 9259594 9259635 -131057130 + (GA)n Simple_repeat Simple_repeat 2 42 0 2207 116 3 3 chr10 9260843 9261153 -131055612 - AluSx SINE Alu 0 312 3 297 0 0 0 chr10 9261834 9261867 -131054898 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 9262481 9262511 -131054254 + AT_rich Low_complexity Low_complexity 1 30 0 1017 185 0 0 chr10 9262894 9263072 -131053693 - AluJb SINE Alu -5 307 130 239 164 36 0 chr10 9263770 9263825 -131052940 + GA-rich Low_complexity Low_complexity 2 58 0 182 356 58 0 chr10 9263917 9264004 -131052761 + MIR3 SINE MIR 87 178 -30 21 0 0 0 chr10 9265264 9265285 -131051480 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 9267011 9267039 -131049726 + AT_rich Low_complexity Low_complexity 1 28 0 216 319 124 0 chr10 9268598 9268711 -131048054 + MIR SINE MIR 20 146 -62 21 57 0 0 chr10 9271272 9271307 -131045458 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr10 9272264 9272291 -131044474 + (A)n Simple_repeat Simple_repeat 1 27 0 273 57 0 0 chr10 9272532 9272567 -131044198 + (TC)n Simple_repeat Simple_repeat 2 36 0 321 26 0 0 chr10 9272567 9272605 -131044160 + (CA)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr10 9272605 9272632 -131044133 + AT_rich Low_complexity Low_complexity 1 27 0 453 307 52 52 chr10 9273399 9273611 -131043154 + MIR SINE MIR 15 226 -36 21 36 0 0 chr10 9273931 9273959 -131042806 + AT_rich Low_complexity Low_complexity 1 28 0 642 299 49 47 chr10 9276502 9276867 -131039898 - L1MC/D LINE L1 -2099 5709 5344 336 306 47 57 chr10 9276899 9277092 -131039673 - MIR SINE MIR -70 192 2 22 0 0 0 chr10 9277127 9277149 -131039616 + AT_rich Low_complexity Low_complexity 1 22 0 237 325 65 0 chr10 9277173 9277250 -131039515 - L2 LINE L2 -3 3310 3229 241 194 30 30 chr10 9278041 9278108 -131038657 + MER116 DNA Mariner 1 67 -13 1768 100 0 0 chr10 9278315 9278546 -131038219 + AluSx SINE Alu 1 231 -81 590 99 41 8 chr10 9278574 9278695 -131038070 + GA-rich Low_complexity Low_complexity 4 128 0 31 44 0 0 chr10 9278841 9278886 -131037879 + AT_rich Low_complexity Low_complexity 1 45 0 305 340 77 19 chr10 9279355 9279511 -131037254 + MIR SINE MIR 57 221 -41 27 49 0 0 chr10 9280852 9280893 -131035872 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 9280969 9280989 -131035776 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 960 43 0 0 chr10 9280991 9281107 -131035658 - AluY SINE Alu -31 280 165 204 234 0 43 chr10 9281757 9281804 -131034961 + polypyrimidine Low_complexity Low_complexity 4 48 0 1134 261 23 3 chr10 9281881 9282180 -131034585 - L1MC/D LINE L1 -986 5160 4856 2073 192 34 9 chr10 9282192 9282734 -131034031 + L1MA9 LINE L1 4886 5436 -743 1069 148 99 0 chr10 9282737 9282939 -131033826 + L1MA6 LINE L1 6073 6294 -6 3776 145 72 65 chr10 9283029 9283773 -131032992 + L1MA9 LINE L1 5417 6169 -143 360 0 0 0 chr10 9283773 9283813 -131032952 + (CA)n Simple_repeat Simple_repeat 1 40 0 3776 145 72 65 chr10 9283813 9283938 -131032827 + L1MA9 LINE L1 6169 6292 -20 25 31 0 0 chr10 9283954 9283986 -131032779 + AT_rich Low_complexity Low_complexity 1 32 0 518 281 63 53 chr10 9284024 9284340 -131032425 + MER34 LTR ERV1 9 530 -177 5056 178 73 57 chr10 9284340 9284869 -131031896 + L1MCa LINE L1 281 800 -5626 270 0 0 0 chr10 9284869 9284899 -131031866 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5056 178 73 57 chr10 9284899 9284924 -131031841 + L1MCa LINE L1 800 823 -5603 303 28 0 0 chr10 9284924 9284960 -131031805 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 5056 178 73 57 chr10 9284960 9285657 -131031108 + L1MCa LINE L1 823 1553 -4873 887 241 4 9 chr10 9285649 9285877 -131030888 + L1M4 LINE L1 3909 4135 -2011 * 254 226 97 0 chr10 9287070 9287132 -131029633 - MER63 DNA MER1_type -16 1045 978 264 219 14 41 chr10 9287291 9287364 -131029401 - MER103 DNA DNA -79 87 17 671 296 43 17 chr10 9287407 9287640 -131029125 + MIR SINE MIR 11 249 -13 446 298 60 38 chr10 9288486 9288885 -131027880 + L1ME LINE L1 534 941 -5129 * 1121 241 46 20 chr10 9288883 9289339 -131027426 + L1ME LINE L1 2793 3260 -2820 847 265 58 0 chr10 9289392 9289649 -131027116 + L1ME LINE L1 3537 3808 -2272 1755 215 35 8 chr10 9290946 9291323 -131025442 - MLT1B LTR MaLR 0 390 4 370 264 0 0 chr10 9291853 9291940 -131024825 - L2 LINE L2 0 3272 3186 666 311 104 32 chr10 9292604 9293248 -131023517 + L2 LINE L2 2549 3206 -107 205 169 26 65 chr10 9296035 9296112 -131020653 + CT-rich Low_complexity Low_complexity 5 78 0 5370 172 29 18 chr10 9296351 9297697 -131019068 - L1PA16 LINE L1 -10 6156 4778 1463 209 14 3 chr10 9297697 9297993 -131018772 - AluJb SINE Alu -8 304 6 5370 172 29 18 chr10 9297993 9298491 -131018274 - L1PA16 LINE L1 -1388 4778 4287 21 0 0 0 chr10 9298617 9298638 -131018127 + AT_rich Low_complexity Low_complexity 1 21 0 440 326 73 22 chr10 9298668 9298981 -131017784 + L1MC4a LINE L1 5583 5911 -1897 329 302 135 75 chr10 9299169 9299241 -131017524 + HAL1 LINE L1 4 70 -2437 1652 241 39 22 chr10 9299241 9299735 -131017030 - MLT1D LTR MaLR 0 505 4 329 302 135 75 chr10 9299735 9300033 -131016732 + HAL1 LINE L1 70 396 -2111 999 192 35 13 chr10 9300057 9300286 -131016479 - L1 LINE L1 -1478 4668 4435 4689 183 32 34 chr10 9300853 9302727 -131014038 + L1MA9 LINE L1 4436 6310 -2 22 0 0 0 chr10 9302835 9302857 -131013908 + AT_rich Low_complexity Low_complexity 1 22 0 568 274 129 35 chr10 9303089 9303548 -131013217 + L2 LINE L2 2631 3133 -180 292 343 10 18 chr10 9303662 9303820 -131012945 - MIR SINE MIR -23 185 31 1886 253 92 29 chr10 9303946 9304245 -131012520 - L1ME1 LINE L1 -63 6172 5893 3153 136 10 0 chr10 9304245 9304737 -131012028 - LOR1a LTR ERV1 0 497 1 1886 253 92 29 chr10 9304737 9305207 -131011558 - L1ME1 LINE L1 -342 5893 5354 23 0 0 0 chr10 9305241 9305264 -131011501 + AT_rich Low_complexity Low_complexity 1 23 0 1344 243 147 16 chr10 9305280 9305925 -131010840 - L1ME1 LINE L1 -872 5343 4614 1264 266 55 9 chr10 9305926 9306384 -131010381 - L1ME1 LINE L1 -2120 4095 3617 237 171 86 14 chr10 9306383 9306453 -131010312 - L1M4 LINE L1 -355 5823 5749 * 347 176 83 46 chr10 9306562 9306670 -131010095 - L1ME1 LINE L1 -2904 3311 3200 21 57 0 0 chr10 9306756 9306791 -131009974 + AT_rich Low_complexity Low_complexity 1 35 0 640 230 15 31 chr10 9306803 9306999 -131009766 - L1ME1 LINE L1 -4628 1768 1576 244 180 0 33 chr10 9306996 9307057 -131009708 - L1MA10 LINE L1 -2 6332 6274 * 3671 181 53 16 chr10 9307053 9307344 -131009421 - L1MA9 LINE L1 -224 6088 5809 387 0 0 0 chr10 9307344 9307387 -131009378 + (TA)n Simple_repeat Simple_repeat 2 44 0 3671 181 53 16 chr10 9307387 9307683 -131009082 - L1MA9 LINE L1 -503 5809 5525 198 0 0 0 chr10 9307683 9307705 -131009060 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3671 181 53 16 chr10 9307705 9307944 -131008821 - L1MA9 LINE L1 -787 5525 5231 674 171 6 57 chr10 9307942 9308117 -131008648 + L1 LINE L1 4553 4718 -1428 * 650 228 40 61 chr10 9308117 9308345 -131008420 + pTR5 LTR ERV1 743 965 -1473 4540 105 46 75 chr10 9308424 9309275 -131007490 + LTR12 LTR ERV1 1 826 0 1022 153 20 44 chr10 9309275 9309478 -131007287 + L1 LINE L1 4715 4912 -1234 2084 112 3 26 chr10 9309631 9309944 -131006821 - AluSx SINE Alu -6 306 1 334 294 176 78 chr10 9310074 9310088 -131006677 + L2 LINE L2 2306 2317 -997 1025 262 62 53 chr10 9310088 9310538 -131006227 + LTR16A1 LTR ERVL 1 454 -3 334 294 176 78 chr10 9310538 9310870 -131005895 + L2 LINE L2 2317 2686 -628 884 44 0 0 chr10 9311117 9311231 -131005534 + L1PA6 LINE L1 6041 6154 0 678 190 0 8 chr10 9311362 9311483 -131005282 - FLAM_C SINE Alu -17 126 7 21 57 0 0 chr10 9311575 9311610 -131005155 + AT_rich Low_complexity Low_complexity 1 35 0 220 269 0 0 chr10 9314172 9314224 -131002541 + (CA)n Simple_repeat Simple_repeat 2 53 0 2256 89 7 0 chr10 9314816 9315108 -131001657 + AluSc SINE Alu 1 294 -15 354 323 78 5 chr10 9315141 9315322 -131001443 + MIR SINE MIR 20 218 -44 725 164 0 0 chr10 9315507 9315623 -131001142 - AluJb SINE Alu -196 116 1 325 348 28 14 chr10 9317173 9317314 -130999451 + MIR3 SINE MIR 41 183 -25 247 268 141 56 chr10 9318082 9318224 -130998541 - MIR3 SINE MIR -1 207 54 611 331 50 4 chr10 9318336 9318596 -130998169 - L2 LINE L2 -341 2973 2702 976 235 15 0 chr10 9318616 9318820 -130997945 - MER58A DNA MER1_type -16 208 2 328 200 0 13 chr10 9318825 9318900 -130997865 - L2 LINE L2 -615 2699 2626 573 55 0 0 chr10 9319074 9319147 -130997618 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1993 112 7 0 chr10 9319168 9319464 -130997301 - AluSp SINE Alu -15 298 1 2112 107 7 3 chr10 9320447 9320747 -130996018 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr10 9321321 9321354 -130995411 + AT_rich Low_complexity Low_complexity 1 33 0 252 77 0 0 chr10 9321627 9321666 -130995099 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6537 76 12 5 chr10 9321667 9322630 -130994135 - L1PA8 LINE L1 -24 6148 5180 3358 127 45 7 chr10 9322606 9323156 -130993609 + L1P LINE L1 3780 4350 -1796 * 658 53 11 0 chr10 9323191 9323285 -130993480 - L1PA13 LINE L1 -3 6160 6066 270 0 0 0 chr10 9323542 9323572 -130993193 + (TG)n Simple_repeat Simple_repeat 2 31 0 530 55 44 0 chr10 9324037 9324128 -130992637 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 204 200 0 0 chr10 9325364 9325404 -130991361 + GA-rich Low_complexity Low_complexity 2 41 0 249 108 0 0 chr10 9325808 9325845 -130990920 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 51 0 0 chr10 9326095 9326134 -130990631 + AT_rich Low_complexity Low_complexity 1 39 0 196 168 53 18 chr10 9326261 9326374 -130990391 + (TA)n Simple_repeat Simple_repeat 1 117 0 237 192 24 48 chr10 9326385 9326510 -130990255 + (TA)n Simple_repeat Simple_repeat 1 122 0 23 33 0 0 chr10 9326751 9326781 -130989984 + AT_rich Low_complexity Low_complexity 1 30 0 276 258 116 111 chr10 9328335 9328560 -130988205 - L2 LINE L2 0 3313 3088 212 361 18 54 chr10 9328578 9328744 -130988021 - L2 LINE L2 -445 2869 2710 6249 78 29 3 chr10 9328744 9329655 -130987110 + L1PA7 LINE L1 5223 6155 0 263 325 24 29 chr10 9329655 9329861 -130986904 + HAL1b LINE L1 378 582 -766 276 271 44 92 chr10 9330013 9330264 -130986501 + L1MC5 LINE L1 7289 7527 -434 357 333 46 6 chr10 9330370 9330544 -130986221 + L1ME3A LINE L1 5990 6170 0 325 284 82 22 chr10 9331227 9331361 -130985404 + MIR SINE MIR 51 192 -70 305 339 92 30 chr10 9331520 9331815 -130984950 - L1ME4a LINE L1 -184 5937 5625 1608 201 7 3 chr10 9332963 9333272 -130983493 + AluJb SINE Alu 1 310 0 219 337 53 42 chr10 9334290 9334385 -130982380 - L2 LINE L2 -21 3251 3156 377 317 129 12 chr10 9334526 9334913 -130981852 - L2 LINE L2 -407 2907 2413 1226 301 22 26 chr10 9334923 9335297 -130981468 + L2 LINE L2 2347 2720 -594 2214 117 0 0 chr10 9335297 9335596 -130981169 + AluSg SINE Alu 1 299 -11 1226 301 22 26 chr10 9335596 9335683 -130981082 + L2 LINE L2 2720 2806 -508 287 296 136 30 chr10 9335715 9335914 -130980851 - L2 LINE L2 -961 2353 2134 574 288 127 76 chr10 9335914 9336402 -130980363 + MLT1E LTR MaLR 1 558 -9 352 262 23 113 chr10 9336553 9336809 -130979956 - L2 LINE L2 -1819 1495 1263 2043 118 14 0 chr10 9337415 9337715 -130979050 + AluSx SINE Alu 1 304 0 218 385 10 26 chr10 9337718 9337910 -130978855 + L2 LINE L2 1767 1955 -1359 184 235 118 24 chr10 9338302 9338387 -130978378 + L2 LINE L2 1991 2083 -1231 2841 303 54 42 chr10 9338795 9340217 -130976548 + L2 LINE L2 1797 3235 -78 396 319 129 12 chr10 9340780 9340943 -130975822 + MIR3 SINE MIR 16 197 -11 2231 108 3 6 chr10 9341433 9341784 -130974981 - L1P LINE L1 -794 5352 5003 1217 47 0 0 chr10 9341799 9341982 -130974783 + L1PA4 LINE L1 5996 6178 0 362 346 55 11 chr10 9342210 9342392 -130974373 + MIR3 SINE MIR 10 199 -9 459 278 8 32 chr10 9343796 9343922 -130972843 - MIR SINE MIR 0 262 140 1029 201 65 76 chr10 9344468 9344837 -130971928 + MLT1A1 LTR MaLR 1 365 0 266 310 26 26 chr10 9344966 9345082 -130971683 - MIR SINE MIR -116 146 31 3318 111 16 2 chr10 9345304 9345801 -130970964 + L1PA15 LINE L1 5662 6165 0 2431 86 0 0 chr10 9346494 9346797 -130969968 - AluSg SINE Alu -7 303 1 603 296 49 16 chr10 9346906 9347213 -130969552 - L1ME4a LINE L1 -207 5914 5598 809 285 139 30 chr10 9347912 9348385 -130968380 - MLT1L LTR MaLR -1 614 90 1721 96 4 0 chr10 9348409 9348639 -130968126 + AluSg/x SINE Alu 74 304 -6 243 0 0 0 chr10 9349106 9349133 -130967632 + (A)n Simple_repeat Simple_repeat 1 27 0 455 313 98 27 chr10 9350020 9350244 -130966521 + MIR SINE MIR 2 241 -21 1936 135 0 0 chr10 9350683 9350987 -130965778 - AluSx SINE Alu 0 304 1 703 140 29 0 chr10 9351066 9351202 -130965563 + (CTTTA)n Simple_repeat Simple_repeat 2 141 0 2207 90 3 3 chr10 9351202 9351502 -130965263 - AluSg SINE Alu -10 300 1 537 282 153 5 chr10 9351590 9351806 -130964959 + MIR SINE MIR 14 261 -1 1809 117 48 31 chr10 9352371 9352492 -130964273 + AluSx SINE Alu 1 118 -194 198 0 0 0 chr10 9352492 9352514 -130964251 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1809 117 48 31 chr10 9352514 9352682 -130964083 + AluSx SINE Alu 118 295 -17 232 182 0 0 chr10 9353623 9353667 -130963098 - MIR SINE MIR -109 153 110 27 62 0 0 chr10 9356692 9356740 -130960025 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 9357117 9357149 -130959616 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr10 9357426 9357493 -130959272 + AT_rich Low_complexity Low_complexity 1 67 0 357 24 0 0 chr10 9357710 9357752 -130959013 + (TG)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr10 9358657 9358703 -130958062 + (CA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9360105 9360215 -130956550 - MER7A DNA MER2_type -2693 345 242 2268 62 0 0 chr10 9360215 9360491 -130956274 + AluY SINE Alu 1 276 -35 275 64 0 21 chr10 9360492 9360539 -130956226 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9360539 9360757 -130956008 - MER7A DNA MER2_type -2795 243 1 22 35 0 0 chr10 9361720 9361749 -130955016 + AT_rich Low_complexity Low_complexity 1 29 0 548 233 0 6 chr10 9361933 9362096 -130954669 + (TA)n Simple_repeat Simple_repeat 1 162 0 365 104 83 23 chr10 9364323 9364583 -130952182 + (TA)n Simple_repeat Simple_repeat 1 275 0 1419 117 206 8 chr10 9364631 9364879 -130951886 + AluSg1 SINE Alu 1 297 -12 26 74 0 0 chr10 9365212 9365266 -130951499 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr10 9365696 9365720 -130951045 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2098 97 0 63 chr10 9365731 9366062 -130950703 - AluSx SINE Alu -2 310 1 1296 159 0 9 chr10 9366184 9366404 -130950361 - AluJb SINE Alu 0 312 95 210 260 14 0 chr10 9366498 9366571 -130950194 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr10 9367140 9367168 -130949597 + AT_rich Low_complexity Low_complexity 1 28 0 2138 41 0 4 chr10 9367737 9368006 -130948759 + L1PA3 LINE L1 5888 6155 0 2135 119 7 3 chr10 9368257 9368560 -130948205 - AluSq SINE Alu -9 304 1 215 59 0 29 chr10 9368611 9368645 -130948120 + (TG)n Simple_repeat Simple_repeat 2 34 0 2081 102 3 23 chr10 9368696 9368999 -130947766 + AluSc SINE Alu 2 298 -11 24 0 0 0 chr10 9369039 9369063 -130947702 + AT_rich Low_complexity Low_complexity 1 24 0 288 200 0 0 chr10 9369175 9369245 -130947520 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 215 123 0 53 chr10 9369388 9369445 -130947320 + (TA)n Simple_repeat Simple_repeat 2 55 0 741 156 0 0 chr10 9369843 9369971 -130946794 + AluSg/x SINE Alu 184 311 -1 311 210 25 103 chr10 9370722 9370872 -130945893 + HAL1b LINE L1 387 483 -865 2111 92 0 0 chr10 9371265 9371537 -130945228 - AluSg SINE Alu -4 306 35 22 56 0 0 chr10 9371903 9371939 -130944826 + AT_rich Low_complexity Low_complexity 1 36 0 248 315 61 44 chr10 9371984 9372165 -130944600 + MIR SINE MIR 53 236 -26 1949 82 90 4 chr10 9372555 9372822 -130943943 - AluSc SINE Alu -17 292 3 236 357 8 23 chr10 9372875 9373004 -130943761 + MIR3 SINE MIR 40 166 -42 2180 145 65 20 chr10 9373028 9373429 -130943336 + MSTB LTR MaLR 8 426 0 270 306 68 34 chr10 9373865 9374012 -130942753 + MIR3 SINE MIR 32 183 -25 27 0 0 0 chr10 9375180 9375207 -130941558 + AT_rich Low_complexity Low_complexity 1 27 0 448 329 55 21 chr10 9375887 9376124 -130940641 - MIR SINE MIR -16 246 2 352 315 94 71 chr10 9376661 9376915 -130939850 + HAL1 LINE L1 56 315 -2192 641 248 59 101 chr10 9377305 9377946 -130938819 + HAL1 LINE L1 861 1474 -1033 634 220 8 0 chr10 9377947 9378065 -130938700 + FLAM_C SINE Alu 2 120 -13 527 234 48 8 chr10 9378065 9378189 -130938576 + MER58B DNA MER1_type 181 309 -32 241 329 0 14 chr10 9380457 9380527 -130936238 - L2 LINE L2 -18 3254 3186 220 256 64 0 chr10 9380801 9380879 -130935886 + MIR SINE MIR 124 206 -56 2143 68 37 17 chr10 9381027 9381323 -130935442 - AluY SINE Alu -9 302 1 735 263 36 0 chr10 9381382 9381576 -130935189 - MIR SINE MIR -40 222 22 297 0 0 0 chr10 9382612 9382645 -130934120 + (CA)n Simple_repeat Simple_repeat 2 34 0 2152 88 0 18 chr10 9382646 9382960 -130933805 - AluY SINE Alu 0 309 1 260 227 0 82 chr10 9382964 9383061 -130933704 - L1M4 LINE L1 -981 5165 5077 1171 186 53 19 chr10 9383392 9383656 -130933109 + L1 LINE L1 4128 4400 -1746 318 164 0 0 chr10 9383768 9383823 -130932942 - MLT1H LTR MaLR -4 545 491 1311 193 3 67 chr10 9384670 9384970 -130931795 - AluJo SINE Alu -27 285 5 228 35 0 0 chr10 9384994 9385023 -130931742 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 243 40 14 chr10 9385421 9385495 -130931270 - MIR SINE MIR -11 251 176 1736 72 38 0 chr10 9385662 9385898 -130930867 - L1PA7 LINE L1 -11 6143 5899 252 185 0 0 chr10 9386419 9386473 -130930292 + T-rich Low_complexity Low_complexity 1 54 0 498 361 61 4 chr10 9386786 9387016 -130929749 + MIR SINE MIR 2 244 -18 2269 144 67 8 chr10 9387121 9387523 -130929242 - MSTA LTR MaLR 0 428 3 231 329 49 63 chr10 9387701 9387844 -130928921 + L2 LINE L2 3132 3272 0 1520 181 21 91 chr10 9388147 9388388 -130928377 - MLT1B LTR MaLR 0 390 189 438 20 0 0 chr10 9388388 9388439 -130928326 + (TG)n Simple_repeat Simple_repeat 2 52 0 1520 181 21 91 chr10 9388439 9388616 -130928149 - MLT1B LTR MaLR -201 189 1 182 283 28 75 chr10 9389211 9389305 -130927460 - L2 LINE L2 -537 2777 2687 1826 163 0 10 chr10 9389305 9389600 -130927165 + AluJb SINE Alu 1 292 -20 182 283 28 75 chr10 9389600 9389611 -130927154 - L2 LINE L2 -627 2687 2677 293 309 100 0 chr10 9390341 9390451 -130926314 - MER103 DNA DNA -2 164 44 7185 33 2 0 chr10 9390481 9391339 -130925426 + L1PA5 LINE L1 5287 6146 -8 3264 128 27 19 chr10 9392552 9393075 -130923690 - MER1A DNA MER1_type 0 527 1 1830 117 0 78 chr10 9393555 9393884 -130922881 + AluSx SINE Alu 1 305 0 858 199 17 6 chr10 9394218 9394394 -130922371 - AluJb SINE Alu -5 307 130 644 324 65 16 chr10 9394435 9394682 -130922083 + MIR SINE MIR 4 262 0 506 275 31 25 chr10 9396393 9396553 -130920212 - MIR SINE MIR -10 252 92 25 51 0 0 chr10 9397741 9397780 -130918985 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 9397852 9397885 -130918880 + AT_rich Low_complexity Low_complexity 1 33 0 4175 190 44 54 chr10 9397889 9398908 -130917857 - L1MB2 LINE L1 -3 6168 5188 2262 95 23 0 chr10 9398908 9399213 -130917552 - AluSx SINE Alu 0 312 1 4175 190 44 54 chr10 9399213 9399484 -130917281 - L1MB2 LINE L1 -983 5188 4916 654 298 36 0 chr10 9399573 9399825 -130916940 - MIR SINE MIR 0 262 2 250 203 14 14 chr10 9399863 9399937 -130916828 + CT-rich Low_complexity Low_complexity 2 75 0 303 181 0 0 chr10 9401771 9401843 -130914922 + GA-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr10 9402327 9402351 -130914414 + AT_rich Low_complexity Low_complexity 1 24 0 983 174 25 5 chr10 9403957 9404158 -130912607 - L1MA5A LINE L1 -3 6294 6090 1507 177 50 4 chr10 9404764 9405091 -130911674 - AluJb SINE Alu 0 312 15 323 291 73 33 chr10 9405634 9405785 -130910980 + MER5A DNA MER1_type 1 157 -32 386 333 15 0 chr10 9406031 9406163 -130910602 + L2 LINE L2 3180 3313 0 182 185 0 74 chr10 9406426 9406480 -130910285 - L3 LINE CR1 -1221 356 307 25 0 0 0 chr10 9406624 9406649 -130910116 + AT_rich Low_complexity Low_complexity 1 25 0 1671 159 7 42 chr10 9406649 9406957 -130909808 - AluJo SINE Alu -15 297 1 1448 113 216 9 chr10 9408219 9408474 -130908291 - AluSg1 SINE Alu 0 305 3 454 280 37 53 chr10 9410349 9410538 -130906227 + MIR SINE MIR 21 206 -56 706 226 60 3 chr10 9410559 9410752 -130906013 + L1MA8 LINE L1 6086 6275 -16 1958 193 48 7 chr10 9410869 9411284 -130905481 + MSTB1 LTR MaLR 1 432 0 8889 192 14 10 chr10 9411284 9412915 -130903850 + MSTB-int LTR MaLR 1 1637 -14 2056 204 36 2 chr10 9412926 9413338 -130903427 + MSTB LTR MaLR 1 426 0 269 360 9 9 chr10 9413501 9413615 -130903150 - MIR SINE MIR -71 191 78 892 221 43 14 chr10 9413924 9414132 -130902633 + MST-int LTR MaLR 562 775 -876 180 0 0 0 chr10 9414743 9414763 -130902002 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 204 196 18 18 chr10 9415953 9416009 -130900756 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2712 187 8 2 chr10 9416121 9416646 -130900119 - L1 LINE L1 -1004 5142 4615 221 96 115 0 chr10 9416929 9416981 -130899784 + (ATATG)n Simple_repeat Simple_repeat 3 60 0 367 388 76 20 chr10 9417103 9417407 -130899358 - L1MEd LINE L1 -5556 563 243 459 248 85 28 chr10 9417974 9418115 -130898650 + MLT1H1 LTR MaLR 403 551 -4 186 312 143 0 chr10 9418318 9418395 -130898370 + L3 LINE CR1 1058 1145 -432 21 0 0 0 chr10 9418896 9418917 -130897848 + AT_rich Low_complexity Low_complexity 1 21 0 348 325 41 0 chr10 9419118 9419241 -130897524 - L2 LINE L2 -9 3304 3177 2316 81 10 3 chr10 9420374 9420671 -130896094 - AluSg SINE Alu -11 299 1 1023 209 4 31 chr10 9420761 9420986 -130895779 + MER20 DNA MER1_type 1 219 0 379 295 108 66 chr10 9421420 9421678 -130895087 - L3 LINE CR1 -2 1575 1307 21 0 0 0 chr10 9422502 9422523 -130894242 + AT_rich Low_complexity Low_complexity 1 21 0 298 260 149 19 chr10 9423089 9423243 -130893522 - MLT1J1 LTR MaLR -272 174 1 2551 97 39 8 chr10 9423700 9424090 -130892675 - L1PA12 LINE L1 -2 6166 5765 556 341 159 24 chr10 9424090 9424669 -130892096 + L2 LINE L2 2661 3313 0 528 101 13 0 chr10 9424821 9424900 -130891865 - MADE1 DNA Mariner 0 80 1 2155 104 7 20 chr10 9426244 9426542 -130890223 + AluSx SINE Alu 1 294 -18 646 345 47 45 chr10 9427941 9428449 -130888316 - HERV16 LTR ERVL -2921 2075 1567 2387 80 10 0 chr10 9428699 9428998 -130887767 - AluSc SINE Alu -7 302 1 211 329 14 0 chr10 9431033 9431103 -130885662 + (TG)n Simple_repeat Simple_repeat 1 71 0 1928 167 0 0 chr10 9433178 9433478 -130883287 - AluSx SINE Alu -12 300 1 1849 132 50 63 chr10 9433685 9434065 -130882700 - THE1C LTR MaLR 0 375 1 4148 110 86 95 chr10 9434710 9436103 -130880662 + pTR5 LTR ERV1 66 2438 0 2056 104 30 7 chr10 9436372 9436669 -130880096 + AluSx SINE Alu 1 304 -8 345 292 17 25 chr10 9436671 9436791 -130879974 - MER5B DNA MER1_type -59 119 1 193 243 84 65 chr10 9438178 9438285 -130878480 + L2 LINE L2 3200 3308 -5 26 0 0 0 chr10 9439024 9439050 -130877715 + AT_rich Low_complexity Low_complexity 1 26 0 560 247 78 119 chr10 9440323 9440674 -130876091 + L1ME LINE L1 11 328 -5742 1832 174 96 34 chr10 9440674 9441081 -130875684 + MSTB1 LTR MaLR 1 432 0 560 247 78 119 chr10 9441081 9441333 -130875432 + L1ME LINE L1 328 589 -5481 763 186 0 0 chr10 9441499 9441623 -130875142 - FLAM_C SINE Alu -19 124 1 2891 280 91 30 chr10 9441623 9444239 -130872526 + L1ME LINE L1 777 3568 -2512 1667 169 72 6 chr10 9444285 9444633 -130872132 + L1MA8 LINE L1 5808 6178 -113 854 205 0 0 chr10 9444800 9444951 -130871814 - FRAM SINE Alu -15 151 1 24 0 0 0 chr10 9444951 9444975 -130871790 + AT_rich Low_complexity Low_complexity 1 24 0 1355 165 0 38 chr10 9444987 9445224 -130871541 - AluJo SINE Alu -84 228 1 2639 33 0 0 chr10 9445799 9446105 -130870660 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 9447745 9447770 -130868995 + AT_rich Low_complexity Low_complexity 1 25 0 1331 216 78 58 chr10 9448722 9449083 -130867682 - MLT1A2 LTR MaLR -1 373 6 459 236 121 50 chr10 9449233 9449415 -130867350 - MIR SINE MIR -27 235 41 451 207 12 18 chr10 9451099 9451268 -130865497 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 180 0 0 chr10 9451307 9451357 -130865408 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2139 99 20 3 chr10 9453003 9453297 -130863468 + AluSg SINE Alu 1 299 -11 319 303 47 57 chr10 9454168 9454379 -130862386 + HAL1b LINE L1 439 647 -701 27 0 0 0 chr10 9454507 9454534 -130862231 + AT_rich Low_complexity Low_complexity 1 27 0 339 300 96 33 chr10 9455136 9455376 -130861389 - MIR SINE MIR 0 262 8 392 308 0 0 chr10 9455405 9455509 -130861256 + L2 LINE L2 3210 3313 0 2005 115 14 0 chr10 9456387 9456717 -130860048 + AluSx SINE Alu 1 334 0 487 104 0 0 chr10 9456816 9456893 -130859872 - Alu SINE Alu -5 305 229 369 0 0 0 chr10 9458036 9458049 -130858716 + (CA)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 9458049 9458090 -130858675 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 105 8 0 chr10 9459096 9459220 -130857545 - AluSx SINE Alu -24 286 162 742 133 0 9 chr10 9459220 9459333 -130857432 - AluSx SINE Alu -200 112 1 25 51 0 0 chr10 9460015 9460054 -130856711 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 9461628 9461652 -130855113 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 9462376 9462417 -130854348 + AT_rich Low_complexity Low_complexity 1 41 0 22 70 0 0 chr10 9462662 9462705 -130854060 + AT_rich Low_complexity Low_complexity 1 43 0 1616 125 29 11 chr10 9463137 9463409 -130853356 + Tigger7 DNA MER2_type 2311 2587 0 27 87 0 0 chr10 9464233 9464302 -130852463 + AT_rich Low_complexity Low_complexity 1 69 0 625 286 95 62 chr10 9465078 9465817 -130850948 - LTR41 LTR ERVL -10 763 1 1230 164 9 14 chr10 9465968 9466187 -130850578 - MER46A DNA MER2_type 0 236 19 773 255 106 64 chr10 9466275 9466651 -130850114 + MLT1J LTR MaLR 79 470 -41 417 177 26 9 chr10 9466761 9466874 -130849891 + CT-rich Low_complexity Low_complexity 3 117 0 1858 156 7 14 chr10 9466876 9467171 -130849594 - AluSq SINE Alu -20 293 1 1097 295 87 2 chr10 9467559 9467952 -130848813 + LTR16A LTR ERVL 22 447 -3 2805 13 0 3 chr10 9468443 9468755 -130848010 + AluYa5 SINE Alu 1 311 0 25 51 0 0 chr10 9469128 9469167 -130847598 + AT_rich Low_complexity Low_complexity 1 39 0 284 332 103 18 chr10 9469616 9469839 -130846926 + MIR SINE MIR 15 256 -6 22 0 0 0 chr10 9470734 9470756 -130846009 + AT_rich Low_complexity Low_complexity 1 22 0 1964 106 32 3 chr10 9472808 9473092 -130843673 + AluSq SINE Alu 1 292 -21 189 0 0 0 chr10 9473389 9473410 -130843355 + (TAA)n Simple_repeat Simple_repeat 3 23 0 272 254 0 15 chr10 9473412 9473479 -130843286 + MLT1E1-int LTR MaLR 1135 1200 -171 1889 223 110 43 chr10 9473592 9474202 -130842563 + MLT1E1 LTR MaLR 1 651 -3 21 0 0 0 chr10 9474673 9474694 -130842071 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr10 9475344 9475386 -130841379 + AT_rich Low_complexity Low_complexity 1 42 0 254 319 30 30 chr10 9475583 9475718 -130841047 - L2 LINE L2 -2 3270 3136 342 0 0 0 chr10 9476218 9476256 -130840509 + (TG)n Simple_repeat Simple_repeat 2 39 0 247 300 0 67 chr10 9476996 9477116 -130839649 - MIR SINE MIR -50 212 101 248 318 190 11 chr10 9477443 9477622 -130839143 + MIR SINE MIR 10 220 -42 223 225 0 0 chr10 9478994 9479034 -130837731 + MIR SINE MIR 48 87 -175 226 316 82 0 chr10 9480148 9480246 -130836519 + MIR SINE MIR 19 124 -84 267 93 0 0 chr10 9486495 9486538 -130830227 + (A)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr10 9487394 9487418 -130829347 + AT_rich Low_complexity Low_complexity 1 24 0 441 272 88 8 chr10 9487756 9487881 -130828884 + MIR3 SINE MIR 42 176 -32 21 71 0 0 chr10 9488003 9488045 -130828720 + AT_rich Low_complexity Low_complexity 1 42 0 226 163 23 0 chr10 9488470 9488513 -130828252 + LTR8A LTR ERV1 207 250 -477 186 43 0 0 chr10 9489417 9489440 -130827325 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr10 9489443 9489466 -130827299 + (CAGGC)n Simple_repeat Simple_repeat 5 27 0 25 31 0 0 chr10 9491509 9491541 -130825224 + AT_rich Low_complexity Low_complexity 1 32 0 193 323 38 113 chr10 9492118 9492304 -130824461 - MIR SINE MIR -66 196 25 514 288 29 0 chr10 9493051 9493190 -130823575 - MIR SINE MIR -1 261 119 276 91 0 0 chr10 9493202 9493246 -130823519 + (TA)n Simple_repeat Simple_repeat 2 45 0 297 315 67 17 chr10 9493609 9493787 -130822978 - HAL1 LINE L1 -1112 1395 1209 333 0 0 0 chr10 9493977 9494014 -130822751 + (TG)n Simple_repeat Simple_repeat 2 38 0 264 39 19 39 chr10 9494271 9494323 -130822442 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 2328 71 4 0 chr10 9494325 9494606 -130822159 - AluY SINE Alu -29 282 1 2493 255 40 69 chr10 9496133 9497194 -130819571 + L1MEc LINE L1 29 1059 -5337 989 205 10 29 chr10 9497206 9497411 -130819354 + MLT1D LTR MaLR 1 201 -304 185 65 32 0 chr10 9497412 9497443 -130819322 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 287 111 42 14 chr10 9497475 9497547 -130819218 + CT-rich Low_complexity Low_complexity 3 76 0 886 236 34 61 chr10 9497547 9497611 -130819154 + MLT1D LTR MaLR 214 278 -227 2120 129 7 0 chr10 9497611 9497914 -130818851 + AluSq SINE Alu 1 305 -8 886 236 34 61 chr10 9497914 9498146 -130818619 + MLT1D LTR MaLR 278 502 -3 689 280 70 14 chr10 9498147 9498433 -130818332 + L1MEc LINE L1 1072 1373 -5023 963 272 191 8 chr10 9498528 9499130 -130817635 + L1MEc LINE L1 1552 2263 -4133 32 57 0 0 chr10 9499138 9499191 -130817574 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr10 9499458 9499486 -130817279 + AT_rich Low_complexity Low_complexity 1 28 0 255 327 26 9 chr10 9499487 9499600 -130817165 + L2 LINE L2 2274 2388 -926 6512 200 19 16 chr10 9499909 9501926 -130814839 + L1MA2 LINE L1 3176 5203 -2362 2474 192 12 2 chr10 9501924 9502418 -130814347 + L1MA2 LINE L1 6041 6539 -1026 * 2178 111 3 6 chr10 9502401 9502717 -130814048 + L1MA2 LINE L1 6894 7208 -515 * 347 179 17 103 chr10 9503007 9503124 -130813641 + MER112 DNA MER1_type 2 108 -152 2489 132 2 32 chr10 9503141 9503447 -130813318 + L1MA2 LINE L1 7190 7481 -242 2485 71 0 0 chr10 9503447 9503757 -130813008 + AluSg SINE Alu 1 310 0 2489 132 2 32 chr10 9503757 9503889 -130812876 + L1MA2 LINE L1 7481 7615 -108 26 0 0 0 chr10 9504020 9504046 -130812719 + AT_rich Low_complexity Low_complexity 1 26 0 2309 97 3 0 chr10 9506432 9506740 -130810025 - AluY SINE Alu -2 309 1 186 133 0 0 chr10 9506969 9506999 -130809766 + (T)n Simple_repeat Simple_repeat 1 30 0 1156 117 0 0 chr10 9507715 9507878 -130808887 + AluSq SINE Alu 137 299 -14 181 341 55 82 chr10 9507893 9508186 -130808579 - L2 LINE L2 -2 3270 2986 21 36 0 0 chr10 9509648 9509676 -130807089 + AT_rich Low_complexity Low_complexity 1 28 0 1703 96 17 0 chr10 9510565 9510804 -130805961 - L1PA10 LINE L1 -14 6154 5912 311 325 0 0 chr10 9511242 9511325 -130805440 + L2 LINE L2 2225 2307 -1007 445 325 64 11 chr10 9511404 9511592 -130805173 + MIR SINE MIR 65 262 0 226 363 11 28 chr10 9511604 9511783 -130804982 + L2 LINE L2 2323 2498 -816 185 360 88 20 chr10 9511883 9512030 -130804735 + L2 LINE L2 2631 2787 -527 23 68 0 0 chr10 9512540 9512584 -130804181 + AT_rich Low_complexity Low_complexity 1 44 0 255 336 153 15 chr10 9515365 9515502 -130801263 + L2 LINE L2 3116 3271 -1 211 179 36 0 chr10 9516505 9516561 -130800204 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr10 9517663 9517684 -130799081 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr10 9519163 9519222 -130797543 + (CA)n Simple_repeat Simple_repeat 2 60 0 1899 86 3 86 chr10 9519229 9519533 -130797232 - AluSg SINE Alu -31 279 1 1317 177 50 0 chr10 9519994 9520304 -130796461 - L1P LINE L1 -759 5406 5086 3300 107 2 4 chr10 9520304 9520798 -130795967 + L1PA13 LINE L1 5669 6163 0 235 149 0 30 chr10 9521363 9521430 -130795335 + (CA)n Simple_repeat Simple_repeat 2 66 0 23 33 0 0 chr10 9522141 9522171 -130794594 + AT_rich Low_complexity Low_complexity 1 30 0 2801 179 21 40 chr10 9522875 9523916 -130792849 - L1MA10 LINE L1 -373 5795 4781 266 208 0 0 chr10 9523913 9523966 -130792799 + L1MA10 LINE L1 5786 5838 -496 * 191 61 30 0 chr10 9523971 9524004 -130792761 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6451 102 32 110 chr10 9524008 9525432 -130791333 - SVA Other Other -17 1369 57 917 106 0 22 chr10 9525432 9525612 -130791153 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 1969 212 56 30 chr10 9525717 9526068 -130790697 + L1MA10 LINE L1 5820 6190 -144 1989 117 22 0 chr10 9526068 9526363 -130790402 + AluSq SINE Alu 5 305 0 1969 212 56 30 chr10 9526363 9526511 -130790254 + L1MA10 LINE L1 6190 6333 -1 189 0 0 0 chr10 9526816 9526837 -130789928 + (CCA)n Simple_repeat Simple_repeat 2 22 0 700 271 140 13 chr10 9527419 9527648 -130789117 + MIR SINE MIR 5 262 0 180 0 0 0 chr10 9527936 9527956 -130788809 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 0 0 0 chr10 9528191 9528228 -130788537 + (TG)n Simple_repeat Simple_repeat 2 38 0 1998 136 0 3 chr10 9528229 9528515 -130788250 - AluSx SINE Alu -27 285 1 329 321 78 10 chr10 9528845 9529038 -130787727 + L1MC4a LINE L1 5791 5996 -1812 228 68 0 68 chr10 9530138 9530197 -130786568 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 352 284 72 93 chr10 9530703 9530822 -130785943 - L1M4 LINE L1 -3187 2959 2839 2135 100 4 0 chr10 9530822 9531126 -130785639 + AluSx SINE Alu 13 317 0 352 284 72 93 chr10 9531126 9531434 -130785331 - L1M4 LINE L1 -3307 2839 2540 387 0 0 0 chr10 9531443 9531486 -130785279 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2776 104 15 5 chr10 9531488 9531890 -130784875 - L1PA11 LINE L1 -15 6159 5754 26 0 0 0 chr10 9532916 9532942 -130783823 + AT_rich Low_complexity Low_complexity 1 26 0 439 261 56 0 chr10 9534212 9534354 -130782411 - MER104 DNA Tc2 -30 150 1 2401 80 0 19 chr10 9534397 9534708 -130782057 - AluSg1 SINE Alu -4 305 1 616 184 0 0 chr10 9535342 9535445 -130781320 - FLAM_A SINE Alu -18 124 22 30 0 0 0 chr10 9537539 9537569 -130779196 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 9537602 9537625 -130779140 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 23 0 0 0 chr10 9538510 9538533 -130778232 + AT_rich Low_complexity Low_complexity 1 23 0 316 295 14 65 chr10 9538855 9538994 -130777771 - L2 LINE L2 0 3313 3182 394 301 51 59 chr10 9539589 9539825 -130776940 + L2 LINE L2 3072 3305 -8 407 216 21 21 chr10 9539952 9540049 -130776716 - MLT1J2 LTR MaLR -284 166 70 768 136 0 64 chr10 9540058 9540198 -130776567 + FLAM_C SINE Alu 3 133 0 24 0 0 0 chr10 9540655 9540679 -130776086 + AT_rich Low_complexity Low_complexity 1 24 0 263 279 37 62 chr10 9541041 9541188 -130775577 + L2 LINE L2 3156 3300 -13 216 67 0 0 chr10 9541188 9541218 -130775547 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 263 279 37 62 chr10 9541218 9541231 -130775534 + L2 LINE L2 3300 3312 -1 186 103 0 0 chr10 9541319 9541348 -130775417 + (TC)n Simple_repeat Simple_repeat 2 30 0 248 277 74 74 chr10 9541720 9541922 -130774843 - MER112 DNA MER1_type -9 251 50 601 277 66 21 chr10 9543489 9543731 -130773034 + MIR SINE MIR 10 262 0 41 48 0 0 chr10 9543897 9543959 -130772806 + AT_rich Low_complexity Low_complexity 1 62 0 332 211 28 110 chr10 9543969 9544003 -130772762 + MARNA DNA Mariner 119 154 -432 264 59 0 0 chr10 9544003 9544037 -130772728 + (TA)n Simple_repeat Simple_repeat 2 35 0 2056 112 14 11 chr10 9544037 9544324 -130772441 - AluSq SINE Alu -25 288 1 332 211 28 110 chr10 9544324 9544397 -130772368 + MARNA DNA Mariner 152 218 -368 3326 136 20 36 chr10 9544405 9544689 -130772076 + L1MA8 LINE L1 5668 5955 -336 2224 100 0 3 chr10 9544689 9544980 -130771785 + AluSg SINE Alu 6 295 -15 3326 136 20 36 chr10 9544980 9545329 -130771436 + L1MA8 LINE L1 5955 6291 0 879 254 5 10 chr10 9545522 9545731 -130771034 - MER58A DNA MER1_type -16 208 1 495 294 44 6 chr10 9546241 9546401 -130770364 - MIR3 SINE MIR -11 197 32 21 0 0 0 chr10 9547499 9547520 -130769245 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 9548671 9548708 -130768057 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 9550130 9550153 -130766612 + AT_rich Low_complexity Low_complexity 1 23 0 2189 108 7 0 chr10 9550971 9551278 -130765487 + AluSq SINE Alu 1 309 -4 264 326 26 34 chr10 9551965 9552123 -130764642 - MIR SINE MIR -81 127 17 742 186 36 7 chr10 9552358 9552498 -130764267 - FRAM SINE Alu -26 150 7 22 56 0 0 chr10 9552618 9552654 -130764111 + AT_rich Low_complexity Low_complexity 1 36 0 286 211 32 84 chr10 9554050 9554145 -130762620 - MIR3 SINE MIR -21 187 98 211 322 20 74 chr10 9554815 9554964 -130761801 + L2 LINE L2 1803 1943 -1371 369 324 17 56 chr10 9555096 9555275 -130761490 + LTR16A LTR ERVL 198 369 -81 1001 223 96 98 chr10 9555380 9555807 -130760958 + MSTA LTR MaLR 1 426 -2 430 53 80 53 chr10 9556212 9556287 -130760478 + MADE1 DNA Mariner 4 80 0 197 108 27 0 chr10 9556631 9556668 -130760097 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 5466 102 16 5 chr10 9557455 9558260 -130758505 + L1PA13 LINE L1 5348 6161 -2 190 323 183 11 chr10 9558787 9558880 -130757885 + MIR3 SINE MIR 46 154 -54 261 229 104 31 chr10 9561014 9561110 -130755655 - L2 LINE L2 -10 3303 3201 420 287 72 24 chr10 9561211 9561378 -130755387 + MER5B DNA MER1_type 1 175 -3 261 179 0 119 chr10 9561388 9561455 -130755310 + L2 LINE L2 3213 3271 -1 2218 124 0 0 chr10 9562234 9562532 -130754233 + AluSx SINE Alu 1 298 -14 522 311 34 10 chr10 9563291 9563500 -130753265 + L1MC4 LINE L1 6459 6672 -1370 566 306 52 9 chr10 9565686 9565915 -130750850 - HERV16 LTR ERVL -2550 3104 2866 334 345 6 24 chr10 9566246 9566414 -130750351 - HERV16 LTR ERVL -3194 2460 2296 2299 113 54 6 chr10 9566425 9566778 -130749987 - THE1C LTR MaLR -3 372 3 355 386 33 39 chr10 9567217 9567637 -130749128 - HERV16 LTR ERVL -3425 1571 1323 252 308 130 35 chr10 9568519 9568688 -130748077 + L2 LINE L2 3109 3293 -20 24 0 0 0 chr10 9569040 9569064 -130747701 + AT_rich Low_complexity Low_complexity 1 24 0 1369 239 15 39 chr10 9569418 9569545 -130747220 + L1MB7 LINE L1 5789 5917 -267 2173 100 17 7 chr10 9569545 9569845 -130746920 - AluSx SINE Alu -9 303 1 1369 239 15 39 chr10 9569845 9570106 -130746659 + L1MB7 LINE L1 5917 6168 -16 312 322 20 0 chr10 9570187 9570386 -130746379 + L1M4 LINE L1 2349 2551 -3595 258 182 26 13 chr10 9570491 9570568 -130746197 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 322 259 130 19 chr10 9570568 9570730 -130746035 + L1MCa LINE L1 2017 2196 -4230 517 248 30 0 chr10 9570762 9570895 -130745870 + L1MC3 LINE L1 6599 6735 -1050 316 211 32 16 chr10 9570899 9571022 -130745743 + L1MB7 LINE L1 6058 6182 -2 186 103 0 0 chr10 9572286 9572315 -130744450 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1038 104 6 22 chr10 9572327 9572510 -130744255 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 9572993 9573015 -130743750 + AT_rich Low_complexity Low_complexity 1 22 0 215 246 0 18 chr10 9574952 9575009 -130741756 + (CATA)n Simple_repeat Simple_repeat 3 58 0 248 245 161 59 chr10 9575010 9575296 -130741469 - L1MC4 LINE L1 -131 7911 7597 454 301 21 36 chr10 9575332 9575525 -130741240 - L1MC4a LINE L1 -393 7415 7226 2294 89 3 3 chr10 9576108 9576412 -130740353 + AluSp SINE Alu 1 304 -9 330 317 147 75 chr10 9577854 9578326 -130738439 - L1MEd LINE L1 -730 1760 1139 190 56 56 0 chr10 9578326 9578362 -130738403 + (TA)n Simple_repeat Simple_repeat 1 38 0 330 317 147 75 chr10 9578362 9578535 -130738230 - L1MEd LINE L1 -1351 1139 980 345 200 38 25 chr10 9579415 9579495 -130737270 + MLT1J LTR MaLR 100 180 -331 2134 120 0 3 chr10 9579538 9579846 -130736919 + AluSc SINE Alu 1 307 -2 1099 211 19 42 chr10 9580312 9580572 -130736193 + L1M4 LINE L1 4536 4789 -1357 2050 127 37 0 chr10 9580891 9581190 -130735575 + AluSq SINE Alu 2 311 -2 2114 171 88 0 chr10 9581667 9582053 -130734712 + MSTB LTR MaLR 3 422 -4 824 110 0 0 chr10 9582673 9582782 -130733983 + AluSq SINE Alu 105 213 -100 870 230 61 9 chr10 9583445 9583675 -130733090 - L1MB8 LINE L1 -6 6172 5931 1585 58 98 146 chr10 9583681 9584010 -130732755 - AluY SINE Alu 0 315 1 190 235 44 44 chr10 9584352 9584420 -130732345 - MIR SINE MIR 0 262 195 22 35 0 0 chr10 9584430 9584459 -130732306 + AT_rich Low_complexity Low_complexity 1 29 0 2009 105 15 52 chr10 9584915 9585239 -130731526 - AluSx SINE Alu 0 312 1 201 362 148 0 chr10 9585683 9585832 -130730933 - L2 LINE L2 -448 2866 2696 983 217 29 16 chr10 9585837 9586081 -130730684 + MLT1A1 LTR MaLR 2 248 -117 192 250 17 50 chr10 9586259 9586319 -130730446 + MIR SINE MIR 205 262 0 491 216 9 38 chr10 9586365 9586496 -130730269 + MLT1A1 LTR MaLR 250 365 0 433 370 56 40 chr10 9586517 9586998 -130729767 - L2 LINE L2 -639 2675 2187 449 324 48 67 chr10 9587006 9587321 -130729444 + L2 LINE L2 2961 3269 -3 2062 120 6 43 chr10 9587331 9587680 -130729085 + L1MA9 LINE L1 5447 5782 -509 3750 112 0 15 chr10 9587703 9588238 -130728527 - MER1A DNA MER1_type 0 527 1 2531 169 31 10 chr10 9588294 9588815 -130727950 + L1MA9 LINE L1 5781 6312 0 407 313 95 29 chr10 9589947 9590381 -130726384 - LTR33 LTR ERVL -2 519 24 507 189 29 11 chr10 9590520 9590611 -130726154 + (TAGA)n Simple_repeat Simple_repeat 3 91 -89 1944 201 6 6 chr10 9590611 9590975 -130725790 + MLT1A1 LTR MaLR 2 365 0 507 189 29 11 chr10 9590975 9591058 -130725707 + (TAGA)n Simple_repeat Simple_repeat 91 180 0 268 193 0 133 chr10 9591085 9591168 -130725597 - MLT2C1 LTR ERVL -50 347 276 546 185 67 8 chr10 9591492 9591611 -130725154 - MSTB1 LTR MaLR -2 430 305 283 103 69 0 chr10 9591590 9591648 -130725117 + AluYb8 SINE Alu 243 304 -4 * 324 314 102 28 chr10 9592109 9592392 -130724373 + L1M4 LINE L1 4247 4550 -1596 1264 107 58 0 chr10 9592415 9592621 -130724144 + L1MA1 LINE L1 6085 6302 0 238 139 38 25 chr10 9593767 9593846 -130722919 + GA-rich Low_complexity Low_complexity 2 81 0 2182 117 3 3 chr10 9595286 9595584 -130721181 - AluSq SINE Alu -15 298 1 683 301 58 62 chr10 9595724 9596223 -130720542 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9596281 9596523 -130720242 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9596744 9597034 -130719731 - AluSx SINE Alu -10 302 1 3943 223 89 96 chr10 9597039 9599159 -130717606 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9599159 9599523 -130717242 + THE1B LTR MaLR 1 364 0 3943 223 89 96 chr10 9599523 9600780 -130715985 - L1MCa LINE L1 -4939 1487 263 2143 129 134 3 chr10 9600780 9601153 -130715612 - MSTA LTR MaLR -2 426 5 3943 223 89 96 chr10 9601153 9601281 -130715484 - L1MCa LINE L1 -6163 263 136 2156 131 3 10 chr10 9601294 9601608 -130715157 - AluSx SINE Alu 0 312 1 2057 140 10 0 chr10 9601653 9601961 -130714804 + AluSq SINE Alu 1 311 -2 745 317 101 29 chr10 9601963 9602379 -130714386 - LTR67 LTR ERVL -79 478 33 1539 213 44 49 chr10 9603122 9603511 -130713254 + MLT1B LTR MaLR 1 387 -3 397 298 43 6 chr10 9604462 9604623 -130712142 - MER110A LTR ERV1 0 468 302 2383 80 0 3 chr10 9604643 9604955 -130711810 + AluY SINE Alu 1 311 0 308 149 0 15 chr10 9604968 9605035 -130711730 + (TA)n Simple_repeat Simple_repeat 2 67 0 395 247 92 35 chr10 9605036 9605210 -130711555 + L1MB7 LINE L1 1706 1889 -4495 2329 216 82 55 chr10 9605254 9605646 -130711119 + L1MB7 LINE L1 5085 5465 -955 1739 173 14 3 chr10 9605646 9605929 -130710836 + AluJb SINE Alu 1 286 -26 2329 216 82 55 chr10 9605929 9606696 -130710069 + L1MB7 LINE L1 5465 6420 0 718 287 78 29 chr10 9607415 9607659 -130709106 + MIR SINE MIR 2 257 -5 2042 106 51 7 chr10 9607748 9608040 -130708725 + AluSg SINE Alu 1 305 -5 1984 127 43 0 chr10 9608528 9608827 -130707938 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9609520 9609621 -130707144 - L1MA6 LINE L1 -303 5997 5903 1613 156 13 42 chr10 9610127 9610434 -130706331 + Tigger2a DNA MER2_type 2 299 -135 534 109 10 69 chr10 9610465 9610566 -130706199 - L1MA6 LINE L1 -303 5997 5903 2358 104 0 0 chr10 9610960 9611268 -130705497 + AluSg SINE Alu 1 308 -2 183 333 0 0 chr10 9611290 9611332 -130705433 + MIR SINE MIR 23 64 -198 243 174 10 82 chr10 9611342 9611440 -130705325 - L1MC4 LINE L1 -1338 6704 6614 238 213 16 31 chr10 9611445 9611707 -130705058 + (TA)n Simple_repeat Simple_repeat 1 257 0 180 77 0 0 chr10 9612313 9612339 -130704426 + (TC)n Simple_repeat Simple_repeat 1 26 0 2030 134 17 0 chr10 9612339 9612630 -130704135 - AluSx SINE Alu -8 304 9 1736 156 64 37 chr10 9614072 9614400 -130702365 + MER1B DNA MER1_type 1 337 0 235 209 314 0 chr10 9615158 9615244 -130701521 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9615353 9615552 -130701213 + MLT1K LTR MaLR 349 547 -41 1811 133 14 0 chr10 9615666 9615967 -130700798 - AluSx SINE Alu 0 305 1 189 349 0 32 chr10 9616065 9616128 -130700637 - L2 LINE L2 -76 3196 3136 319 242 31 47 chr10 9616700 9616736 -130700029 + CT-rich Low_complexity Low_complexity 3 38 -90 2735 88 3 0 chr10 9616736 9617099 -130699666 + THE1B LTR MaLR 1 364 0 319 242 31 47 chr10 9617099 9617190 -130699575 + CT-rich Low_complexity Low_complexity 38 128 0 905 118 0 7 chr10 9617203 9617355 -130699410 + (TTC)n Simple_repeat Simple_repeat 2 152 0 2121 133 7 0 chr10 9617394 9617696 -130699069 + AluSx SINE Alu 1 304 -8 256 345 53 35 chr10 9618026 9618139 -130698626 - L2 LINE L2 -21 3251 3137 1284 212 75 47 chr10 9618285 9618644 -130698121 - MLT1A2 LTR MaLR -5 369 1 869 218 17 6 chr10 9618826 9619000 -130697765 - MER5A DNA MER1_type -5 184 9 940 247 60 33 chr10 9619022 9619322 -130697443 + L1ME3A LINE L1 5805 6112 -58 187 404 27 76 chr10 9619393 9619616 -130697149 - L2 LINE L2 -11 3261 3050 2667 227 64 112 chr10 9620350 9621456 -130695309 - L1MC/D LINE L1 -743 5797 5002 189 0 0 0 chr10 9621456 9621477 -130695288 + (TG)n Simple_repeat Simple_repeat 2 22 0 2667 227 64 112 chr10 9621477 9622359 -130694406 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9622359 9622395 -130694370 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7120 24 0 0 chr10 9622395 9623217 -130693548 - L1PA3 LINE L1 -24 6131 5310 * 9994 22 0 0 chr10 9623215 9624393 -130692372 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9624393 9624574 -130692191 - L1MC/D LINE L1 -2449 4091 3905 558 224 17 70 chr10 9624578 9624819 -130691946 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9624934 9625233 -130691532 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9625537 9625606 -130691159 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9625605 9625711 -130691054 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9625743 9625809 -130690956 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9625805 9625853 -130690912 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9625853 9625933 -130690832 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9625943 9626102 -130690663 + L1MA8 LINE L1 6130 6288 -3 4066 196 40 17 chr10 9626102 9626986 -130689779 + Cheshire DNA MER1_type 847 1750 -670 238 139 38 25 chr10 9678104 9678183 -130638582 + GA-rich Low_complexity Low_complexity 2 81 0 2211 114 3 3 chr10 9679623 9679922 -130636843 - AluSq SINE Alu -14 299 1 683 301 58 62 chr10 9680062 9680561 -130636204 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9680619 9680861 -130635904 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9681082 9681372 -130635393 - AluSx SINE Alu -10 302 1 3967 224 88 96 chr10 9681377 9683497 -130633268 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9683497 9683861 -130632904 + THE1B LTR MaLR 1 364 0 3967 224 88 96 chr10 9683861 9685118 -130631647 - L1MCa LINE L1 -4939 1487 263 2175 121 134 3 chr10 9685118 9685491 -130631274 - MSTA LTR MaLR -2 426 5 3967 224 88 96 chr10 9685491 9685619 -130631146 - L1MCa LINE L1 -6163 263 136 2189 127 3 10 chr10 9685636 9685950 -130630815 - AluSx SINE Alu 0 312 1 1072 175 13 35 chr10 9686260 9686488 -130630277 + AluSq SINE Alu 89 311 -2 732 317 101 29 chr10 9686490 9686906 -130629859 - LTR67 LTR ERVL -79 478 33 1511 216 44 49 chr10 9687651 9688040 -130628725 + MLT1B LTR MaLR 1 387 -3 199 346 111 43 chr10 9688052 9688376 -130628389 - L2 LINE L2 -1210 2104 1759 415 292 43 6 chr10 9688990 9689151 -130627614 - MER110A LTR ERV1 0 468 302 2382 72 7 3 chr10 9689171 9689478 -130627287 + AluY SINE Alu 1 308 -3 336 242 11 22 chr10 9689496 9689587 -130627178 - L1MC4 LINE L1 -1339 6703 6614 381 253 92 35 chr10 9689590 9689764 -130627001 + L1MB7 LINE L1 1706 1889 -4495 2295 218 82 55 chr10 9689808 9690200 -130626565 + L1MB7 LINE L1 5085 5465 -955 1765 170 14 3 chr10 9690200 9690483 -130626282 + AluJb SINE Alu 1 286 -26 2295 218 82 55 chr10 9690483 9691250 -130625515 + L1MB7 LINE L1 5465 6420 0 684 295 78 29 chr10 9691968 9692212 -130624553 + MIR SINE MIR 2 257 -5 2255 108 0 7 chr10 9692301 9692606 -130624159 + AluSg SINE Alu 1 303 -7 1984 127 43 0 chr10 9693094 9693393 -130623372 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9694087 9694188 -130622577 - L1MA6 LINE L1 -303 5997 5903 183 42 0 0 chr10 9694346 9694370 -130622395 + (A)n Simple_repeat Simple_repeat 1 24 0 1636 153 13 42 chr10 9694696 9695003 -130621762 + Tigger2a DNA MER2_type 2 299 -135 549 99 10 69 chr10 9695034 9695135 -130621630 - L1MA6 LINE L1 -303 5997 5903 2330 110 0 0 chr10 9695529 9695839 -130620926 + AluSg SINE Alu 1 310 0 183 333 0 0 chr10 9695862 9695904 -130620861 + MIR SINE MIR 23 64 -198 254 180 0 33 chr10 9695914 9695975 -130620790 - L1MC4 LINE L1 -1338 6704 6646 289 233 14 31 chr10 9696000 9696287 -130620478 + (TA)n Simple_repeat Simple_repeat 1 282 0 225 0 0 0 chr10 9696566 9696591 -130620174 + (T)n Simple_repeat Simple_repeat 1 25 0 180 77 0 0 chr10 9696892 9696918 -130619847 + (TC)n Simple_repeat Simple_repeat 1 26 0 2024 134 17 0 chr10 9696918 9697209 -130619556 - AluSx SINE Alu -8 304 9 1043 195 93 0 chr10 9698656 9698861 -130617904 + MER1B DNA MER1_type 1 224 -73 235 209 314 0 chr10 9699545 9699631 -130617134 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9699740 9699939 -130616826 + MLT1K LTR MaLR 349 547 -41 1798 137 14 0 chr10 9700053 9700357 -130616408 - AluSx SINE Alu 0 308 1 294 316 129 71 chr10 9700455 9700661 -130616104 - L2 LINE L2 -76 3237 3044 2202 126 0 0 chr10 9700661 9700971 -130615794 + AluSx SINE Alu 1 310 -2 294 316 129 71 chr10 9700971 9701160 -130615605 - L2 LINE L2 -269 3044 2819 2163 97 28 3 chr10 9701385 9701675 -130615090 + AluSx SINE Alu 1 297 -15 1917 102 0 4 chr10 9702311 9702565 -130614200 - AluSc SINE Alu -17 292 40 241 238 48 12 chr10 9702711 9702795 -130613970 + L1MC4 LINE L1 6609 6695 -1347 314 296 24 16 chr10 9703364 9703401 -130613364 + CT-rich Low_complexity Low_complexity 4 39 -90 2695 96 3 0 chr10 9703401 9703764 -130613001 + THE1B LTR MaLR 1 364 0 314 296 24 16 chr10 9703764 9703851 -130612914 + CT-rich Low_complexity Low_complexity 39 129 0 878 121 0 7 chr10 9703868 9704017 -130612748 + (TTC)n Simple_repeat Simple_repeat 2 149 0 2150 134 7 0 chr10 9704056 9704363 -130612402 + AluSx SINE Alu 1 309 -3 248 354 53 35 chr10 9704692 9704805 -130611960 - L2 LINE L2 -21 3251 3137 908 211 89 59 chr10 9705053 9705357 -130611408 - MLT1A2 LTR MaLR -61 313 1 869 218 17 6 chr10 9705539 9705713 -130611052 - MER5A DNA MER1_type -5 184 9 960 246 70 32 chr10 9705735 9706080 -130610685 + L1ME3A LINE L1 5805 6162 -8 186 386 31 81 chr10 9706106 9706329 -130610436 - L2 LINE L2 -11 3261 3050 2645 231 62 110 chr10 9707061 9708167 -130608598 - L1MC/D LINE L1 -743 5797 5002 207 0 0 0 chr10 9708167 9708190 -130608575 + (TG)n Simple_repeat Simple_repeat 2 24 0 2645 231 62 110 chr10 9708190 9709072 -130607693 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9709072 9709108 -130607657 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7146 23 0 0 chr10 9709108 9709930 -130606835 - L1PA3 LINE L1 -24 6131 5310 * 9994 22 0 0 chr10 9709928 9711106 -130605659 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9711106 9711287 -130605478 - L1MC/D LINE L1 -2449 4091 3905 541 228 17 70 chr10 9711291 9711532 -130605233 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9711647 9711946 -130604819 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9712250 9712319 -130604446 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9712318 9712424 -130604341 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9712456 9712522 -130604243 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9712518 9712566 -130604199 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9712566 9712646 -130604119 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9712656 9712815 -130603950 + L1MA8 LINE L1 6130 6288 -3 6576 194 36 12 chr10 9712815 9714266 -130602499 + Cheshire DNA MER1_type 847 2333 -87 270 395 8 0 chr10 9714961 9715080 -130601685 - ERVL LTR ERVL -2263 3501 3382 864 371 89 12 chr10 9715100 9715852 -130600913 - ERVL LTR ERVL -2972 2792 1983 463 139 13 0 chr10 9716073 9716152 -130600613 + MADE1 DNA Mariner 1 80 0 414 0 0 0 chr10 9716341 9716387 -130600378 + (TG)n Simple_repeat Simple_repeat 2 47 0 291 332 88 36 chr10 9716409 9716683 -130600082 - ERVL LTR ERVL -4084 1680 1393 2313 142 81 51 chr10 9717430 9717924 -130598841 - LTR22 LTR ERVK 0 509 1 423 302 85 32 chr10 9718541 9718611 -130598154 - LTR33 LTR ERVL -242 279 214 2048 185 80 74 chr10 9718611 9719162 -130597603 + MLT2B3 LTR ERVL 1 554 0 423 302 85 32 chr10 9719162 9719339 -130597426 - LTR33 LTR ERVL -307 214 19 304 336 79 57 chr10 9719655 9720325 -130596440 + L1MEd LINE L1 100 784 -5335 180 0 0 0 chr10 9722627 9722647 -130594118 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2057 155 3 23 chr10 9723026 9723375 -130593390 - MER7A DNA MER2_type -1 345 6 274 237 40 0 chr10 9724030 9724106 -130592659 + (CATA)n Simple_repeat Simple_repeat 4 82 0 443 166 30 12 chr10 9724107 9724276 -130592489 + (TA)n Simple_repeat Simple_repeat 2 173 0 298 88 77 11 chr10 9726044 9726135 -130590630 + (TA)n Simple_repeat Simple_repeat 2 98 0 269 156 78 7 chr10 9726332 9726486 -130590279 + (TA)n Simple_repeat Simple_repeat 2 166 0 419 130 82 14 chr10 9726521 9726806 -130589959 + (TA)n Simple_repeat Simple_repeat 1 304 0 1076 59 0 0 chr10 9726806 9726941 -130589824 + MER85 DNA T2_type 4 138 -1 279 94 94 0 chr10 9727035 9727131 -130589634 + (TA)n Simple_repeat Simple_repeat 1 105 0 201 343 96 22 chr10 9729521 9729699 -130587066 - L2 LINE L2 -1291 2023 1833 1983 143 7 3 chr10 9729775 9730069 -130586696 + AluSx SINE Alu 1 295 -17 4064 153 20 6 chr10 9730163 9730857 -130585908 - MER50 LTR ERV1 -30 704 1 35 63 0 0 chr10 9731069 9731132 -130585633 + AT_rich Low_complexity Low_complexity 1 63 0 1111 219 29 21 chr10 9731609 9731888 -130584877 + MER89 LTR ERV1 279 559 0 2054 116 7 3 chr10 9731929 9732236 -130584529 + AluSq SINE Alu 1 308 0 1427 201 22 43 chr10 9732488 9732857 -130583908 - MLT1A1 LTR MaLR 0 365 5 515 241 35 14 chr10 9734142 9734287 -130582478 - MIR SINE MIR -6 256 109 233 213 32 32 chr10 9735020 9735114 -130581651 + A-rich Low_complexity Low_complexity 4 97 0 315 309 46 40 chr10 9735611 9735763 -130581002 + HAL1b LINE L1 684 836 -512 1482 279 79 37 chr10 9735841 9736719 -130580046 - L1MEc LINE L1 -3563 2652 1754 1982 148 3 3 chr10 9736719 9737030 -130579735 - AluSx SINE Alu -1 311 1 1482 279 79 37 chr10 9737030 9737320 -130579445 - L1MEc LINE L1 -4461 1754 1477 259 331 47 54 chr10 9737505 9737653 -130579112 - L2 LINE L2 -1 3271 3125 184 109 22 22 chr10 9737930 9737976 -130578789 + A-rich Low_complexity Low_complexity 2 47 0 234 0 0 0 chr10 9738799 9738825 -130577940 + (GA)n Simple_repeat Simple_repeat 1 26 0 1826 122 0 4 chr10 9739005 9739252 -130577513 - AluSg SINE Alu -35 275 30 918 86 0 0 chr10 9739355 9739483 -130577282 - L1PA6 LINE L1 0 6154 6027 413 227 0 24 chr10 9739565 9739708 -130577057 + Tigger5 DNA MER2_type 1 193 -2130 439 189 0 0 chr10 9739711 9739785 -130576980 + Tigger5 DNA MER2_type 2250 2323 0 312 118 0 108 chr10 9740194 9740253 -130576512 + AluSx SINE Alu 1 44 -258 510 46 0 0 chr10 9740253 9740318 -130576447 + (TC)n Simple_repeat Simple_repeat 1 65 0 7448 62 42 2 chr10 9740342 9741012 -130575753 + LTR13 LTR ERVK 1 723 -284 213 39 0 0 chr10 9741012 9741038 -130575727 + (TC)n Simple_repeat Simple_repeat 2 27 0 7448 62 42 2 chr10 9741038 9741335 -130575430 + LTR13 LTR ERVK 723 1007 0 1592 157 4 0 chr10 9741597 9741846 -130574919 + AluSx SINE Alu 61 310 -2 1338 254 11 14 chr10 9741854 9742216 -130574549 + MLT1A1 LTR MaLR 5 365 0 26 0 0 0 chr10 9743513 9743539 -130573226 + AT_rich Low_complexity Low_complexity 1 26 0 966 92 7 7 chr10 9744029 9744170 -130572595 + L1PA11 LINE L1 6031 6171 -3 1333 221 17 20 chr10 9744359 9744653 -130572112 + AluJb SINE Alu 1 293 -19 277 313 55 25 chr10 9745928 9746091 -130570674 - HERVL LTR ERVL -3097 2557 2390 821 156 78 28 chr10 9746303 9746483 -130570282 + MLT1B LTR MaLR 1 189 -201 11675 81 1 19 chr10 9746542 9748105 -130568660 + HERVL-A1 LTR ERVL 4119 5654 0 2917 71 20 8 chr10 9748105 9748499 -130568266 + MLT2A1 LTR ERVL 1 399 -45 333 276 155 30 chr10 9748597 9748862 -130567903 + L1MC5 LINE L1 7627 7924 -37 41 58 0 0 chr10 9749597 9749666 -130567099 + AT_rich Low_complexity Low_complexity 1 69 0 13872 154 16 11 chr10 9749666 9752072 -130564693 + Tigger1 DNA MER2_type 1 2418 0 2310 85 0 3 chr10 9752200 9752493 -130564272 - AluSg SINE Alu -18 292 1 1249 286 167 20 chr10 9752511 9753302 -130563463 + L2 LINE L2 2258 3165 -148 325 301 71 27 chr10 9755661 9755844 -130560921 + MIR SINE MIR 72 262 0 24 0 0 0 chr10 9756594 9756618 -130560147 + AT_rich Low_complexity Low_complexity 1 24 0 608 327 19 56 chr10 9756740 9757116 -130559649 + L1MEc LINE L1 109 470 -5926 350 198 135 10 chr10 9757141 9757237 -130559528 - L1MEc LINE L1 -4623 1773 1666 * 912 225 67 101 chr10 9757234 9757387 -130559378 - L1M4 LINE L1 -912 5234 5077 1987 129 7 3 chr10 9757387 9757674 -130559091 - AluSx SINE Alu -24 288 1 912 225 67 101 chr10 9757674 9758027 -130558738 - L1M4 LINE L1 -1069 5077 4745 443 279 118 42 chr10 9758052 9758289 -130558476 - L1M4 LINE L1 -2800 3346 3092 1065 304 56 20 chr10 9758369 9758981 -130557784 + L1MEc LINE L1 498 1131 -5265 1456 241 98 18 chr10 9758981 9759550 -130557215 - L1M4 LINE L1 -3168 2978 2364 438 302 131 20 chr10 9759740 9760084 -130556681 + L1MEc LINE L1 1220 1601 -4614 41 48 0 0 chr10 9760133 9760195 -130556570 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr10 9760205 9760232 -130556533 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3935 78 0 4 chr10 9760240 9760753 -130556012 - MER9 LTR ERVK 0 511 1 424 387 30 0 chr10 9761139 9761307 -130555458 + MER115 DNA AcHobo 170 342 -351 563 269 75 0 chr10 9761406 9761566 -130555199 + MER115 DNA AcHobo 522 693 0 26 0 0 0 chr10 9761833 9761859 -130554906 + AT_rich Low_complexity Low_complexity 1 26 0 1654 213 77 0 chr10 9762523 9762899 -130553866 - MER74A LTR ERVL -26 532 128 2125 150 25 11 chr10 9762974 9763333 -130553432 + THE1B LTR MaLR 1 364 0 206 125 0 25 chr10 9764729 9764769 -130551996 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 588 179 0 0 chr10 9766058 9766181 -130550584 - L1MA4 LINE L1 -239 6061 5939 1118 154 21 17 chr10 9766186 9766419 -130550346 + L1MA4 LINE L1 6067 6300 0 2322 125 23 0 chr10 9766577 9766921 -130549844 - THE1B LTR MaLR 0 364 13 204 40 0 0 chr10 9767212 9767237 -130549528 + (TG)n Simple_repeat Simple_repeat 2 26 0 374 349 28 25 chr10 9769620 9769944 -130546821 - L1ME LINE L1 -372 5749 5425 477 252 40 89 chr10 9770533 9770894 -130545871 - MLT2C1 LTR ERVL -43 620 18 1156 164 65 104 chr10 9774186 9774571 -130542194 - LTR25 LTR ERV1 -10 784 415 274 197 136 0 chr10 9774539 9774605 -130542160 - MER51A LTR ERV1 -351 283 209 * 312 235 42 18 chr10 9774772 9774884 -130541881 - MER61E LTR ERV1 -484 85 1 831 239 110 0 chr10 9774964 9775299 -130541466 + Charlie1 DNA MER1_type 2390 2761 0 360 43 0 0 chr10 9775434 9775480 -130541285 + (TG)n Simple_repeat Simple_repeat 2 47 0 244 271 0 0 chr10 9775538 9775597 -130541168 - L2 LINE L2 0 3313 3255 699 230 58 26 chr10 9776042 9776233 -130540532 + MIR SINE MIR 2 198 -64 24 0 0 0 chr10 9776293 9776317 -130540448 + AT_rich Low_complexity Low_complexity 1 24 0 397 282 92 14 chr10 9776483 9776625 -130540140 + L3 LINE CR1 677 829 -748 21 71 0 0 chr10 9777947 9777989 -130538776 + AT_rich Low_complexity Low_complexity 1 42 0 216 67 0 0 chr10 9778280 9778310 -130538455 + (A)n Simple_repeat Simple_repeat 1 30 0 2297 99 0 0 chr10 9778315 9778618 -130538147 + AluSc SINE Alu 1 303 -6 1112 201 68 95 chr10 9779186 9779619 -130537146 + MLT2C2 LTR ERVL 5 425 -39 240 59 0 0 chr10 9779619 9779653 -130537112 + (CA)n Simple_repeat Simple_repeat 1 34 0 1112 201 68 95 chr10 9779653 9779692 -130537073 + MLT2C2 LTR ERVL 425 464 0 1481 125 37 0 chr10 9780258 9780513 -130536252 + AluSx SINE Alu 60 322 0 375 315 108 47 chr10 9782329 9782542 -130534223 + MLT1J LTR MaLR 1 226 -285 3177 272 41 14 chr10 9782720 9784234 -130532531 - L1MEc LINE L1 -2779 3647 2125 616 242 55 16 chr10 9784280 9784462 -130532303 - MER58A DNA MER1_type 0 224 36 247 275 71 71 chr10 9784534 9784745 -130532020 - L1MEc LINE L1 -4738 1688 1478 233 273 30 0 chr10 9784747 9784813 -130531952 + CT-rich Low_complexity Low_complexity 4 71 0 252 300 66 39 chr10 9784813 9785070 -130531695 - L1MEc LINE L1 -4920 2202 1939 758 229 45 14 chr10 9785300 9785523 -130531242 - L1MEc LINE L1 -6168 255 26 247 282 15 38 chr10 9785643 9785774 -130530991 - HAL1 LINE L1 -1352 1155 1028 411 328 53 65 chr10 9786019 9786510 -130530255 - HAL1 LINE L1 -1988 519 35 837 260 32 65 chr10 9787016 9787275 -130529490 - L1ME1 LINE L1 -134 6032 5786 1948 155 57 28 chr10 9787275 9787629 -130529136 + THE1B LTR MaLR 1 364 0 837 260 32 65 chr10 9787629 9787772 -130528993 - L1ME1 LINE L1 -380 5786 5640 189 0 0 0 chr10 9787796 9787817 -130528948 + (T)n Simple_repeat Simple_repeat 1 21 0 658 301 0 19 chr10 9787884 9788097 -130528668 - MER58A DNA MER1_type -8 216 8 328 333 39 8 chr10 9788100 9788229 -130528536 - Zaphod DNA AcHobo -3445 586 454 288 217 0 0 chr10 9788277 9788346 -130528419 + G-rich Low_complexity Low_complexity 1 69 0 1617 309 13 20 chr10 9788474 9789028 -130527737 - Zaphod DNA AcHobo -3480 551 2 280 355 45 27 chr10 9789033 9789253 -130527512 + L2 LINE L2 2684 2907 -407 22 0 0 0 chr10 9790494 9790516 -130526249 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 9791035 9791056 -130525709 + AT_rich Low_complexity Low_complexity 1 21 0 4272 174 66 57 chr10 9791081 9792143 -130524622 + MER11C LTR ERVK 1 1071 0 200 411 9 9 chr10 9792149 9792256 -130524509 + L2 LINE L2 3136 3242 -30 269 294 39 106 chr10 9792280 9792398 -130524367 - MIR SINE MIR -28 234 131 1995 132 20 0 chr10 9792398 9792694 -130524071 + AluSx SINE Alu 1 302 -10 269 294 39 106 chr10 9792694 9792755 -130524010 - MIR SINE MIR -131 131 67 27 0 0 0 chr10 9793012 9793039 -130523726 + AT_rich Low_complexity Low_complexity 1 27 0 188 67 33 0 chr10 9794173 9794203 -130522562 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 811 286 83 35 chr10 9794673 9795151 -130521614 - L1ME1 LINE L1 0 6166 5629 25 31 0 0 chr10 9795439 9795471 -130521294 + AT_rich Low_complexity Low_complexity 1 32 0 291 282 28 0 chr10 9795842 9795913 -130520852 - MIR3 SINE MIR -6 202 130 22 35 0 0 chr10 9796308 9796337 -130520428 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 9796641 9796662 -130520103 + AT_rich Low_complexity Low_complexity 1 21 0 344 289 21 72 chr10 9797480 9797674 -130519091 - L1ME3A LINE L1 -18 6152 5969 2019 136 0 17 chr10 9797679 9797981 -130518784 + AluSx SINE Alu 7 303 -9 927 305 103 25 chr10 9798068 9799061 -130517704 - L1ME3A LINE L1 -202 5960 4896 360 207 0 0 chr10 9799365 9799423 -130517342 - AluJ/FRAM SINE Alu -13 289 232 843 144 8 0 chr10 9799431 9799556 -130517209 - AluJb SINE Alu -186 126 1 567 308 87 61 chr10 9799558 9800510 -130516255 - L1ME3A LINE L1 -1587 4559 3566 1398 283 32 20 chr10 9800510 9801009 -130515756 + MLT1D LTR MaLR 1 505 0 567 308 87 61 chr10 9801009 9801302 -130515463 - L1ME3A LINE L1 -2580 3566 3282 290 325 9 0 chr10 9801654 9801768 -130514997 + L1M4 LINE L1 4052 4166 -1980 25 83 0 0 chr10 9801894 9801954 -130514811 + AT_rich Low_complexity Low_complexity 1 60 0 542 324 110 39 chr10 9801968 9801990 -130514775 + L1M4 LINE L1 4390 4409 -1737 1749 189 9 3 chr10 9801990 9802329 -130514436 + L1MC1 LINE L1 5980 6320 -13 542 324 110 39 chr10 9802329 9802899 -130513866 + L1M4 LINE L1 4409 5024 -1122 2455 71 0 7 chr10 9802934 9803243 -130513522 + AluY SINE Alu 1 307 -4 417 169 331 0 chr10 9803259 9803395 -130513370 + L1MB7 LINE L1 2334 2514 -3632 4600 209 33 38 chr10 9803413 9805594 -130511171 + L1MB7 LINE L1 4005 6165 -19 363 338 29 7 chr10 9805990 9806129 -130510636 - MIR SINE MIR -114 148 7 25 0 0 0 chr10 9806975 9807000 -130509765 + AT_rich Low_complexity Low_complexity 1 25 0 208 200 22 0 chr10 9808069 9808114 -130508651 + (TAA)n Simple_repeat Simple_repeat 1 46 0 369 350 54 8 chr10 9810274 9810514 -130506251 + MLT1L LTR MaLR 357 607 -8 2576 164 9 2 chr10 9810571 9811011 -130505754 + L1MC1 LINE L1 5356 5798 -535 312 87 0 0 chr10 9811196 9811242 -130505523 + L1MC1 LINE L1 5816 5861 -483 2203 173 30 49 chr10 9811298 9811771 -130504994 + L1MC1 LINE L1 5870 6333 0 1375 175 110 7 chr10 9811781 9812089 -130504676 - MER2 DNA MER2_type -4 340 1 1131 190 26 8 chr10 9812089 9812348 -130504417 + L1MB2 LINE L1 5903 6169 -2 254 215 15 0 chr10 9812349 9812414 -130504351 + (TA)n Simple_repeat Simple_repeat 1 66 0 761 179 8 0 chr10 9812508 9812642 -130504123 - AluSq/x SINE Alu -167 146 12 275 201 160 104 chr10 9812643 9812787 -130503978 + LTR16C LTR ERVL 332 483 -8 1617 191 133 39 chr10 9813706 9813876 -130502889 - MLT1D LTR MaLR -2 503 350 2697 10 0 0 chr10 9813876 9814175 -130502590 - AluYa5 SINE Alu -12 299 1 1617 191 133 39 chr10 9814175 9814464 -130502301 - MLT1D LTR MaLR -155 350 1 292 274 24 0 chr10 9814513 9814597 -130502168 - LTR33 LTR ERVL -10 511 426 2229 115 0 0 chr10 9816332 9816636 -130500129 + AluSx SINE Alu 2 305 -7 654 309 70 8 chr10 9817031 9817274 -130499491 - MLT1J LTR MaLR -210 301 44 8075 181 51 18 chr10 9817789 9818333 -130498432 + Tigger1 DNA MER2_type 1 526 -1892 1559 125 13 0 chr10 9818333 9818565 -130498200 + AluSg/x SINE Alu 67 301 -11 8075 181 51 18 chr10 9818565 9819702 -130497063 + Tigger1 DNA MER2_type 526 1737 -681 1877 72 4 0 chr10 9819702 9819939 -130496826 + L1P4 LINE L1 5443 5680 -488 8521 38 0 0 chr10 9820094 9821883 -130494882 - L1PA4 LINE L1 -1 6154 4351 3889 32 0 0 chr10 9821883 9822347 -130494418 + L1PA4 LINE L1 3884 4347 -1799 28 29 0 0 chr10 9822502 9822537 -130494228 + AT_rich Low_complexity Low_complexity 1 35 0 247 195 52 0 chr10 9822611 9822688 -130494077 + L1MC4 LINE L1 1478 1558 -5301 * 925 311 73 38 chr10 9822675 9823514 -130493251 + L1MC4 LINE L1 2171 3038 -4100 * 1644 74 0 0 chr10 9823513 9823728 -130493037 + L1P LINE L1 4745 4959 -1187 521 249 101 0 chr10 9823744 9823933 -130492832 + L1MC4 LINE L1 5473 5680 -1277 689 65 65 9 chr10 9824150 9824257 -130492508 + L1PA14 LINE L1 6044 6156 -5 266 212 15 0 chr10 9824270 9824336 -130492429 - Tigger1 DNA MER2_type -2351 67 1 2023 257 50 14 chr10 9824352 9824999 -130491766 + L1MC4 LINE L1 6107 6776 -2077 207 114 0 0 chr10 9825031 9825066 -130491699 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 497 268 146 7 chr10 9825083 9825370 -130491395 + L1MEc LINE L1 1914 2240 -4156 599 274 124 17 chr10 9825381 9825622 -130491143 + L1M4b LINE L1 18 284 -6575 316 277 11 119 chr10 9825746 9826006 -130490759 + L1M4b LINE L1 994 1225 -5634 1567 259 74 45 chr10 9826258 9826828 -130489937 + L1M4b LINE L1 2512 3064 -3893 1936 139 0 32 chr10 9826828 9827137 -130489628 + AluSx SINE Alu 1 299 -13 1567 259 74 45 chr10 9827137 9827786 -130488979 + L1M4b LINE L1 3064 3743 -3214 2056 116 0 0 chr10 9827787 9828064 -130488701 + AluSx SINE Alu 1 277 -35 825 340 49 29 chr10 9828190 9828643 -130488122 - LTR16B LTR ERVL 0 464 3 485 285 51 19 chr10 9828651 9828865 -130487900 - L1MEc LINE L1 -3549 2666 2446 2034 293 69 52 chr10 9828903 9829848 -130486917 - L1MEc LINE L1 -3976 2420 1493 192 77 0 0 chr10 9829848 9829874 -130486891 + (TG)n Simple_repeat Simple_repeat 2 27 0 2034 293 69 52 chr10 9829874 9831299 -130485466 - L1MEc LINE L1 -4903 1493 14 269 241 12 24 chr10 9831277 9831360 -130485405 + L1MC/D LINE L1 5705 5786 -2022 * 212 208 19 0 chr10 9831522 9831575 -130485190 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 53 0 0 chr10 9833459 9833497 -130483268 + AT_rich Low_complexity Low_complexity 1 38 0 937 195 0 0 chr10 9834475 9834629 -130482136 + AluJb SINE Alu 133 286 -26 191 363 96 19 chr10 9835166 9835323 -130481442 + MIR3 SINE MIR 33 201 -7 279 71 0 0 chr10 9835562 9835604 -130481161 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr10 9835866 9835915 -130480850 + AT_rich Low_complexity Low_complexity 1 49 0 1510 188 91 0 chr10 9836615 9836934 -130479831 + MER7A DNA MER2_type 1 346 0 680 303 90 34 chr10 9837062 9837329 -130479436 + LTR16C LTR ERVL 67 348 -143 29 0 0 0 chr10 9837329 9837358 -130479407 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 37 58 chr10 9837367 9837661 -130479104 - AluJo SINE Alu -24 288 1 2125 117 3 0 chr10 9837672 9837962 -130478803 - AluSp SINE Alu -11 302 12 250 218 148 92 chr10 9837963 9838105 -130478660 + LTR16C LTR ERVL 332 481 -10 911 233 110 0 chr10 9838549 9838841 -130477924 - MER33 DNA MER1_type 0 324 1 293 250 11 0 chr10 9839276 9839368 -130477397 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 225 211 0 0 chr10 9839522 9839574 -130477191 + (TA)n Simple_repeat Simple_repeat 2 53 0 236 281 49 0 chr10 9839584 9839666 -130477099 - L1MC4 LINE L1 -1343 6699 6614 219 298 0 0 chr10 9839683 9839767 -130476998 + (TA)n Simple_repeat Simple_repeat 1 84 0 274 388 39 0 chr10 9839828 9839931 -130476834 - MIR SINE MIR -83 125 19 189 0 0 0 chr10 9840245 9840266 -130476499 + (CA)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr10 9840976 9841008 -130475757 + (GA)n Simple_repeat Simple_repeat 1 32 0 2165 98 0 7 chr10 9841630 9841939 -130474826 + AluSg SINE Alu 1 310 0 2483 80 0 3 chr10 9842418 9842756 -130474009 - L1PA13 LINE L1 -250 5913 5577 1664 83 0 0 chr10 9842756 9842982 -130473783 + L1PA13 LINE L1 5920 6147 -16 361 19 57 0 chr10 9844088 9844141 -130472624 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2175 216 31 72 chr10 9845203 9845841 -130470924 - LTR9 LTR ERV1 0 612 1 2605 157 71 39 chr10 9846244 9846778 -130469987 - MER39 LTR ERV1 -2 705 155 2078 117 7 0 chr10 9847567 9847881 -130468884 + AluSx SINE Alu 1 312 0 437 224 93 100 chr10 9849549 9849758 -130467007 - MIR SINE MIR -9 253 42 612 101 0 0 chr10 9850276 9850365 -130466400 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 25 0 0 0 chr10 9850514 9850539 -130466226 + AT_rich Low_complexity Low_complexity 1 25 0 239 29 57 0 chr10 9850824 9850859 -130465906 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1919 109 7 4 chr10 9850868 9851142 -130465623 - AluSx SINE Alu -37 275 1 2205 78 0 3 chr10 9851673 9851975 -130464790 - AluSg SINE Alu 0 301 1 180 0 0 0 chr10 9853341 9853361 -130463404 + (TA)n Simple_repeat Simple_repeat 2 21 0 409 328 126 8 chr10 9853550 9853812 -130462953 + L1M4 LINE L1 4069 4361 -1785 304 267 97 48 chr10 9854073 9854238 -130462527 + L1M4 LINE L1 4492 4664 -1482 225 240 0 0 chr10 9854321 9854371 -130462394 + L1M4 LINE L1 4797 4846 -1300 272 317 94 15 chr10 9854396 9854737 -130462028 + L1M4 LINE L1 4903 5270 -876 30 45 0 0 chr10 9854755 9854799 -130461966 + AT_rich Low_complexity Low_complexity 1 44 0 437 332 85 5 chr10 9855635 9855858 -130460907 - L2 LINE L2 -637 2677 2437 472 155 29 0 chr10 9856000 9856103 -130460