This directory contains reciprocal-best netted chains for hg38-panPan2.

 - hg38.panPan2.rbest.net.gz: hg38-referenced recip.best net to panPan2.
 - hg38.panPan2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg38 to panPan2 through the recip.best net.

 - panPan2.hg38.rbest.net.gz: panPan2-referenced recip.best net.
 - panPan2.hg38.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/hg38.panPan2.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
Parent Directory - axtRBestNet/ 2016-05-24 19:16 - hg38.panPan2.rbest.chain.gz 2016-05-24 16:13 12M hg38.panPan2.rbest.net.gz 2016-05-24 16:13 23M md5sum.txt 2016-05-24 16:13 244 panPan2.hg38.rbest.chain.gz 2016-05-24 16:12 12M panPan2.hg38.rbest.net.gz 2016-05-24 16:12 17M