wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1; type=bam; md5sum=2aac07f3f113b5bd708915081eb1a11d; size=7.5G
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1; type=bai; md5sum=0da3b2adf4f21d5bb50e7cae31b91f2c; size=6.5M
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2; type=bam; md5sum=6cfac7b713ffd1dac8d96220991fae70; size=6.6G
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2; type=bai; md5sum=cdfd482d0d8708fff9a3a64f0a488da8; size=6.5M
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=66118a478dab7d5340a6e21565624b4d; size=5.0G
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b46f7df44de12eded9e6d2762a6ec130; size=4.3G
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c5aeefb747af4a34afdca8522f9a120c; size=5.3G
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=133cddeadce29d2beb24985d8e5bb824; size=4.6G
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=c154c45c5de93dae94786c9f8dc04861; size=169M
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=2dfe4c0935cfb01d7e179a264d607e52; size=164M
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=5f0c5ff9633fc0439d4e926d1e457857; size=173M
wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=6c39308975dd9a3aeb161a76a61b9534; size=168M
wgEncodeCshlLongRnaSeqA549CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPamContigs; type=bedRnaElements; md5sum=b830589743a3a6cb332fac235ecf9224; size=16M
wgEncodeCshlLongRnaSeqA549CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7017; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1b33cf1ab99acdaf7d6a6e8302b79238; size=11M
wgEncodeCshlLongRnaSeqA549CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4589; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c8199d0058cf3eb9f33231d343d87848; size=19M
wgEncodeCshlLongRnaSeqA549CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4e7bde376070aa4d486eb62ee372d654; size=3.5M
wgEncodeCshlLongRnaSeqA549CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7482; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labProtocolId=021WC-,022WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f4c09a5bdfc6d5eae3520e0871fca849; size=5.6M
wgEncodeCshlLongRnaSeqA549CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4589; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b344ba56b012db6da7524d725ce846d2; size=2.0M
wgEncodeCshlLongRnaSeqA549CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPamJunctions; type=bedRnaElements; md5sum=5182126a7beec4810657e096465684e3; size=5.1M
wgEncodeCshlLongRnaSeqA549CellPamProtocolRep1.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=9c31282e64375b22af330b882984454f; size=356K
wgEncodeCshlLongRnaSeqA549CellPamProtocolRep2.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=2101ea6b5718a86acb86905e3765f897; size=357K
wgEncodeCshlLongRnaSeqA549CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4258; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a8f5a36a45995c45f34d92679b3220b1; size=529M
wgEncodeCshlLongRnaSeqA549CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4213; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5ec24bdf52a1c534bf5630249ff1bf0c; size=419M
wgEncodeCshlLongRnaSeqA549CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=deb4f180cee8a3e9ff7a6319574a899e; size=18M
wgEncodeCshlLongRnaSeqA549CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7482; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labProtocolId=021WC-,022WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e929527ba0c4b55f807a6fd677dbd663; size=6.1M
wgEncodeCshlLongRnaSeqA549CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4589; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPamTranscriptGencV7; type=gtf; md5sum=8e081541337a72c44a68156ed35d4420; size=4.8M
wgEncodeCshlLongRnaSeqA549CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep1; type=bam; md5sum=6ac70824daafd4d48ca7666a8d7f0f36; size=12G
wgEncodeCshlLongRnaSeqA549CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep1; type=bai; md5sum=3976d51809de9a90a2899929905827a0; size=6.9M
wgEncodeCshlLongRnaSeqA549CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep2; type=bam; md5sum=b6c1b68f7839a19422b55c586bab4e7d; size=13G
wgEncodeCshlLongRnaSeqA549CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep2; type=bai; md5sum=a3e4d22810234d83d56ad5a1e3954f75; size=7.3M
wgEncodeCshlLongRnaSeqA549CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapContigs; type=bedRnaElements; md5sum=04ed6fd4e425f94df02e1d287c5bcb81; size=14M
wgEncodeCshlLongRnaSeqA549CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6991; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b9aaf8118fcbd654cf530a7b4f73bbd5; size=7.2M
wgEncodeCshlLongRnaSeqA549CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4549; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=03c19397f58f1bf0552ee4c5e14d54e5; size=19M
wgEncodeCshlLongRnaSeqA549CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=76e72210d1b9addbd0e093b07122b639; size=6.8G
wgEncodeCshlLongRnaSeqA549CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ce7d690dd6a5e21356474899631b7c77; size=7.7G
wgEncodeCshlLongRnaSeqA549CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7cf599f8b4deb26f9e6a22d0ee64446f; size=6.7G
wgEncodeCshlLongRnaSeqA549CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8083aefd023bb7bb188c90415303921c; size=7.8G
wgEncodeCshlLongRnaSeqA549CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9a1aba565ec3e4f3ff4b0edb85bf1d44; size=1.5M
wgEncodeCshlLongRnaSeqA549CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7441; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labProtocolId=021WC+,022WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9920dd2eed55143bd1b759af41b5ed1f; size=1.6M
wgEncodeCshlLongRnaSeqA549CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4549; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=faba02704bf1a5ada5dc9ca01e722a88; size=2.1M
wgEncodeCshlLongRnaSeqA549CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapJunctions; type=bedRnaElements; md5sum=84eb11cffb3b0c9c90ef3089047b38d3; size=11M
wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep1; type=bigWig; md5sum=16e2e0315b427257095cd941c0b0dd0b; size=659M
wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep2; type=bigWig; md5sum=b1aa909c2a71ac9ac5a87c9cc555c527; size=717M
wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep1; type=bigWig; md5sum=3462180fab45dfd6a1046ecaa622a93f; size=677M
wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep2; type=bigWig; md5sum=18000971b8ad4bf2a4867e7e4f887180; size=735M
wgEncodeCshlLongRnaSeqA549CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d88214daf2f649539d70456dccf07399; size=625K
wgEncodeCshlLongRnaSeqA549CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d71d2631aa980f5e56a3307b436f0fe0; size=643K
wgEncodeCshlLongRnaSeqA549CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4191; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2046eed83e54b4923fe30b0d0a946301; size=81M
wgEncodeCshlLongRnaSeqA549CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4188; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=ace88a9f47c6b88af8272b6ace037cd0; size=77M
wgEncodeCshlLongRnaSeqA549CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=db1b68ce4663864898a3a54130267ae7; size=17M
wgEncodeCshlLongRnaSeqA549CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7441; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labProtocolId=021WC+,022WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5fb115df99508018acded13ca5c886f; size=2.1M
wgEncodeCshlLongRnaSeqA549CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4549; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapTranscriptGencV7; type=gtf; md5sum=23bf162e73146232ce26cf7ce21509c1; size=5.1M
wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3; type=bam; md5sum=3b490f645453a8aa306c10a542c465a3; size=15G
wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3; type=bai; md5sum=76d050d7f6689c1cd230b224374d12da; size=7.8M
wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4; type=bam; md5sum=399fec19341e4bf250e8dde71e579d31; size=17G
wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4; type=bai; md5sum=a03a6c1080da67212fdd876d8274c116; size=8.4M
wgEncodeCshlLongRnaSeqA549CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6040; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapContigs; type=bedRnaElements; md5sum=f676bbb59f70c42876119f38b0568261; size=16M
wgEncodeCshlLongRnaSeqA549CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7016; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=49fb5900044d8ac227cc7e08c01fbd32; size=21M
wgEncodeCshlLongRnaSeqA549CytosolPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6386; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=12e09a9f94ecd7f1903d99ea82014b55; size=21M
wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3543c3b3c77b42e5b25ecabda7b6170f; size=11G
wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=eadd44d2aff41d33105cf3e1f0ab0eeb; size=12G
wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=ced4510309d7edbcf88b47abcc8f0797; size=11G
wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=db5f31b63166f8cb24f7f9c4a907b996; size=12G
wgEncodeCshlLongRnaSeqA549CytosolPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7427; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labProtocolId=087C+,088C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=03dfe883a19d279116eb925d5c1a1a6a; size=1.2M
wgEncodeCshlLongRnaSeqA549CytosolPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6386; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=b2b38990770602a2867f7e41571606c1; size=1.9M
wgEncodeCshlLongRnaSeqA549CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6068; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapJunctions; type=bedRnaElements; md5sum=f57864f22c749f8899c496f1bcd23f5b; size=20M
wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep3; type=bigWig; md5sum=98a7e27b17839cee681726edbc89a888; size=127M
wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep4; type=bigWig; md5sum=bed46406712f98093f8f5e6d17d4f52e; size=135M
wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep3; type=bigWig; md5sum=9fadb2172719af5738f57cb8c8fb8f48; size=131M
wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep4; type=bigWig; md5sum=40a36c88e92cb1ca74c87aab8af11f89; size=139M
wgEncodeCshlLongRnaSeqA549CytosolPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6876; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=7e69f0218733811c05a229a3b7810807; size=369K
wgEncodeCshlLongRnaSeqA549CytosolPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6894; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=6964f461dd1643d06b70496953ca3572; size=347K
wgEncodeCshlLongRnaSeqA549CytosolPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=48c7bff607abc2a667c51e9a92f4133e; size=357M
wgEncodeCshlLongRnaSeqA549CytosolPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=43dcfc1bf61ff80ec74a3b27686a9a0a; size=376M
wgEncodeCshlLongRnaSeqA549CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7427; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labProtocolId=087C+,088C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=92293d37f13b6c4f416146045e645941; size=1.7M
wgEncodeCshlLongRnaSeqA549CytosolPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6386; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapTranscriptGencV10; type=gtf; md5sum=7cc5a47ffecb541cc716a014137684f0; size=5.1M
wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3; type=bam; md5sum=d3c07fe0bcf0452b7ce0828bb6ef10ac; size=22G
wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3; type=bai; md5sum=3fd6f51f8131d112476fab08810c7e7d; size=9.3M
wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4; type=bam; md5sum=4b531e6b016327cf1961ae83f009b53e; size=11G
wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4; type=bai; md5sum=c1b4226d6b1abf4ef22ad367089211c7; size=7.3M
wgEncodeCshlLongRnaSeqA549NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6036; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapContigs; type=bedRnaElements; md5sum=48d0dca14b4d57d6b7496ed55518b24f; size=28M
wgEncodeCshlLongRnaSeqA549NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7005; geoSampleAccession=GSM981247; labExpId=LID45900,LID45899; bioRep=088N,087N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=c561fce7d7b32225c99747d95810383a; size=20M
wgEncodeCshlLongRnaSeqA549NucleusPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6381; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=a236696ec866f93b4f9a97398c8d4cc5; size=21M
wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=eb233fb39bdb51bdf7572290ec344bee; size=15G
wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b80881b49f1dfc049aeddcbdcbe8d434; size=7.7G
wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=15ecebbad95d140c29eaaa83f4985a26; size=15G
wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=8f45fb4617c5b66171cd19caa2df42af; size=7.8G
wgEncodeCshlLongRnaSeqA549NucleusPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7420; geoSampleAccession=GSM981247; labExpId=LID45900,LID45899; bioRep=088N,087N; labProtocolId=088N+,087N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=d305b800cb402d786763c445a00d0c62; size=3.5M
wgEncodeCshlLongRnaSeqA549NucleusPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6381; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=77f519fc5632ec4736666c977278410f; size=1.9M
wgEncodeCshlLongRnaSeqA549NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6059; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapJunctions; type=bedRnaElements; md5sum=cd641d2f0019ed1972b6eba6bf37ba27; size=19M
wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep3; type=bigWig; md5sum=23f311ee241bc3c7cd6b3770672ae946; size=232M
wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep4; type=bigWig; md5sum=5bb61d77cdff71f7de2e2fabf6fd4b0e; size=193M
wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep3; type=bigWig; md5sum=7dcd6fd38939dca5b5cdf26bc4734333; size=240M
wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep4; type=bigWig; md5sum=206d8010e2d43178b4703c67234e5f89; size=199M
wgEncodeCshlLongRnaSeqA549NucleusPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6900; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=1e96894421e634223df6f1ab9b2ce0fa; size=425K
wgEncodeCshlLongRnaSeqA549NucleusPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6872; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=b21d1bbbfdcfc1d0a5b535f9a10901a1; size=409K
wgEncodeCshlLongRnaSeqA549NucleusPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=13a3cf78259cccfa84111948a3625e0f; size=395M
wgEncodeCshlLongRnaSeqA549NucleusPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=bb34dd305b8c9ff58f9f71afa20c9318; size=363M
wgEncodeCshlLongRnaSeqA549NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7420; geoSampleAccession=GSM981247; labExpId=LID45900,LID45899; bioRep=088N,087N; labProtocolId=088N+,087N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=0d34c03ead29234081628230ee7d2c1b; size=4.1M
wgEncodeCshlLongRnaSeqA549NucleusPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6381; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapTranscriptGencV10; type=gtf; md5sum=46dc05c9ebece588b891033b4440906d; size=5.1M
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1; type=bam; md5sum=bf874b47b46a49e9408b66dd0f8784d5; size=7.6G
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1; type=bai; md5sum=0694486e4a024908c72e8fc2c173b328; size=6.6M
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2; type=bam; md5sum=b2d49064bf6100d51ba8383ef40de2e2; size=7.8G
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2; type=bai; md5sum=b3f52dd205053226aa8de5804274f81c; size=6.4M
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=02b8369e5831a95e4a308cab11e8b7b2; size=5.0G
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cd87b6035f0f3e0957556c998f20995e; size=5.3G
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b5ec89ce6f04fb74fbcf5a76b6b76b6e; size=5.1G
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=59774fe2d55049012367aa734ffade4c; size=5.5G
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=f8c0e13d372dfdcd794ace4e67de0995; size=778M
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=9616613f0f2e7d06199d8be50c40e62a; size=151M
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=c4f0a60a2ee011be7aa2c0d2df2fd21b; size=805M
wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=4794e5b1f475d044fb924cb6df9523c7; size=154M
wgEncodeCshlLongRnaSeqAg04450CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPamContigs; type=bedRnaElements; md5sum=52dd695dafe22c5d71ae151577a229c6; size=15M
wgEncodeCshlLongRnaSeqAg04450CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6946; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ef20a24e3ddd77f66a32ee0be595da22; size=9.2M
wgEncodeCshlLongRnaSeqAg04450CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4558; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d7cea3e64ccea65613a07ee807a5cd1a; size=19M
wgEncodeCshlLongRnaSeqAg04450CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=05ce37190de4ade2bb718a809848070d; size=2.7M
wgEncodeCshlLongRnaSeqAg04450CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7452; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labProtocolId=017WC-,018WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6d235490ffb5e82a80a6332356b9411e; size=4.2M
wgEncodeCshlLongRnaSeqAg04450CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4558; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b6ce9d2b72167bf78d675094362ca2a9; size=2.0M
wgEncodeCshlLongRnaSeqAg04450CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPamJunctions; type=bedRnaElements; md5sum=0e905d97381fd9400f2ee5dbe487be4a; size=5.0M
wgEncodeCshlLongRnaSeqAg04450CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4208; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2d45677fe2f2783339443986552414a3; size=446M
wgEncodeCshlLongRnaSeqAg04450CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4205; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d687a3c37a718e4f684f6d52f32feebb; size=614M
wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fa96a5383f0e3abaffd952f98cca9c7a; size=15M
wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7452; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labProtocolId=017WC-,018WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0c9adf8c564f18667427c1f8be31d855; size=4.6M
wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4558; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptGencV7; type=gtf; md5sum=fab19638c2c43fd5995f23fbfce8e076; size=4.8M
wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1; type=bam; md5sum=b04b44097cc0d85871b2b85d16c0e726; size=13G
wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1; type=bai; md5sum=6e7e60e44a5ba6b749018df2048ceeea; size=7.0M
wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2; type=bam; md5sum=0769d29627ad2d59745d7a3f7934097b; size=13G
wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2; type=bai; md5sum=856fd7103cfc96569749d6ed0a9e6d84; size=7.0M
wgEncodeCshlLongRnaSeqAg04450CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapContigs; type=bedRnaElements; md5sum=07e87488e7af8e706e8f19fe3eb8d2d4; size=13M
wgEncodeCshlLongRnaSeqAg04450CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6942; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=81e91f0512b63ee1d5753d8e63780547; size=6.6M
wgEncodeCshlLongRnaSeqAg04450CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4554; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4536d749f7d1629171d84f4fb64b5392; size=19M
wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=29994ee3818ce71139b382afb3ef3874; size=7.9G
wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b4ad4b1f1690753d16d63518db9f6215; size=7.8G
wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f29631a0dc083bc334a12bad5b629a86; size=7.9G
wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1ff857ec58e22faa0265cdbbe5820dfe; size=7.9G
wgEncodeCshlLongRnaSeqAg04450CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=947f5241f2d6d86dd00aa975be5f1035; size=1.2M
wgEncodeCshlLongRnaSeqAg04450CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7447; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labProtocolId=017WC+,018WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0556511edae949eb2bbe365ebbade29f; size=1.2M
wgEncodeCshlLongRnaSeqAg04450CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4554; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2041388e7e32be3ba5225d5ca1fb6c98; size=2.1M
wgEncodeCshlLongRnaSeqAg04450CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapJunctions; type=bedRnaElements; md5sum=f9feeb044851231d8e78f611bab12843; size=8.8M
wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep1; type=bigWig; md5sum=fda0397331ce7ca6ffb9cd2a3d5b7d47; size=573M
wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep2; type=bigWig; md5sum=330b15afad4afaab080e0b5bbd73452d; size=535M
wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep1; type=bigWig; md5sum=63b34dfd670b697a0c2f3d0bfbf9dc05; size=588M
wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep2; type=bigWig; md5sum=1c24ab1724a4df1e8329993651c0f237; size=550M
wgEncodeCshlLongRnaSeqAg04450CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1b294c280d800871b7023a5c08d9d185; size=621K
wgEncodeCshlLongRnaSeqAg04450CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d1b5afdf6114e9c7d3b25250655df5b8; size=629K
wgEncodeCshlLongRnaSeqAg04450CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4253; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=f470eadf7aafecaf76e7df9e90ff20bd; size=111M
wgEncodeCshlLongRnaSeqAg04450CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4250; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4bfa572632aef9ded256430b0d168e1e; size=157M
wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=42806836f6d2acc15ed0bf3c8a10a4b9; size=15M
wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7447; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labProtocolId=017WC+,018WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d822bf24729fc5034e6b6f7150b315d7; size=1.6M
wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4554; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptGencV7; type=gtf; md5sum=aacf107c3de4dee8a9bf9681668b0e9b; size=5.0M
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1; type=bam; md5sum=5ff8fd7689442e2d3e0e84bfd8ebcbb2; size=6.8G
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1; type=bai; md5sum=5f18542615c5d66311e1d948bdceeff7; size=6.3M
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2; type=bam; md5sum=3d2246eca90ce5f6cf2ba05aa4138260; size=6.5G
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2; type=bai; md5sum=7b2803d446d031b25c3d6580ec0a13e4; size=6.4M
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4f102e79029de2346c8413cab7b2aea4; size=4.7G
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=85febd523eeeefbca022f94399bfcf4a; size=4.5G
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=64e9fd52b9881acbbfa5bad5ef2f4dfe; size=5.1G
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cb66f92ee33cfde0c6324eecf666c6d9; size=4.7G
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=ed370ae62ed221ca867ede2a49d889a3; size=135M
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=fc1a1d7c0c1bc218dcce280cfa97aba3; size=134M
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=f00c37ab459ca81c53191b799b5b3e1e; size=141M
wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=4e6f9165bb3a6059b621c6cd6c16ed2c; size=140M
wgEncodeCshlLongRnaSeqBjCellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPamContigs; type=bedRnaElements; md5sum=3fc283e272af02cd4eff99121b7a45df; size=15M
wgEncodeCshlLongRnaSeqBjCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6965; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0c6661593a66cff9e41f0893a13278c2; size=9.4M
wgEncodeCshlLongRnaSeqBjCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4581; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=abd01477933de79eedd5abaf5402be6e; size=18M
wgEncodeCshlLongRnaSeqBjCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2f246848e185a8ceda8917b9124f1bd1; size=2.7M
wgEncodeCshlLongRnaSeqBjCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7472; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labProtocolId=037WC-,038WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=2657ad4d638513eb3fcff050f19d8a55; size=4.6M
wgEncodeCshlLongRnaSeqBjCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4581; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d198f7c3bfb52bd604511552d3e9e9af; size=2.0M
wgEncodeCshlLongRnaSeqBjCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPamJunctions; type=bedRnaElements; md5sum=e3586c7489d814b12e530fd6350409d4; size=4.3M
wgEncodeCshlLongRnaSeqBjCellPamProtocolRep1.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=58963fc04189bf2f1302a7a90dce4bc6; size=352K
wgEncodeCshlLongRnaSeqBjCellPamProtocolRep2.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e38af8abcf549bdbed47da5d813b14e7; size=359K
wgEncodeCshlLongRnaSeqBjCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4190; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=262e142bd4fdb035bca97222f731be92; size=595M
wgEncodeCshlLongRnaSeqBjCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4254; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c5c63068bc436685441852dab8fafa07; size=590M
wgEncodeCshlLongRnaSeqBjCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d05dfe1ea442991e722cdab968f20072; size=14M
wgEncodeCshlLongRnaSeqBjCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7472; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labProtocolId=037WC-,038WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5b21098169fa0d8bd4848a5b040f5bc; size=5.1M
wgEncodeCshlLongRnaSeqBjCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4581; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPamTranscriptGencV7; type=gtf; md5sum=a023af5f3520935f655b54cffcd6a8c6; size=4.8M
wgEncodeCshlLongRnaSeqBjCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep1; type=bam; md5sum=aca7563b75059b34dbde330163a7f93c; size=11G
wgEncodeCshlLongRnaSeqBjCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep1; type=bai; md5sum=aae48a5d20ca761d91cbd75e913c7e60; size=6.6M
wgEncodeCshlLongRnaSeqBjCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep2; type=bam; md5sum=0465277e9bc56886f737aa4141bfcf01; size=11G
wgEncodeCshlLongRnaSeqBjCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep2; type=bai; md5sum=bb7414e2a4e820b2d88ed7bf9edc484b; size=6.3M
wgEncodeCshlLongRnaSeqBjCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapContigs; type=bedRnaElements; md5sum=c65a5db1991f1a934fab425f74dd907e; size=11M
wgEncodeCshlLongRnaSeqBjCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7004; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8a8f111288e5810857211b403b3a31aa; size=6.5M
wgEncodeCshlLongRnaSeqBjCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4576; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=81bf9268f0925331de0e73620970ceb0; size=19M
wgEncodeCshlLongRnaSeqBjCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f9cf6c332c26b90909a74be2d878eabb; size=6.8G
wgEncodeCshlLongRnaSeqBjCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a246dc38a67aa16504518bd7cc3ca502; size=6.9G
wgEncodeCshlLongRnaSeqBjCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc506fb9a06b7807adf2e05fccbf2586; size=6.8G
wgEncodeCshlLongRnaSeqBjCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3d83787e240d7295206e264f42526363; size=6.9G
wgEncodeCshlLongRnaSeqBjCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=feb50dfc8c2c0c444c20afc5638c215c; size=1.1M
wgEncodeCshlLongRnaSeqBjCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7469; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labProtocolId=037WC+,038WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=faf5517e8e148e8121fafe19998fc444; size=1.1M
wgEncodeCshlLongRnaSeqBjCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4576; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9f5fa21db8af5c3faed1851322570a26; size=2.0M
wgEncodeCshlLongRnaSeqBjCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapJunctions; type=bedRnaElements; md5sum=0c0fb8f1d8212d785a0efe30db698979; size=8.9M
wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep1; type=bigWig; md5sum=0415dbe7e4baefa0941b49c578b4431f; size=499M
wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep2; type=bigWig; md5sum=6656e0683ee649fa35aa7f091115b572; size=408M
wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep1; type=bigWig; md5sum=7b2302db1d7d19d35635451146694f5c; size=519M
wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep2; type=bigWig; md5sum=456c3e8da305b3319d6bec9432bbcef1; size=425M
wgEncodeCshlLongRnaSeqBjCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=112ab88c13437f1455967a87e04d1c0b; size=608K
wgEncodeCshlLongRnaSeqBjCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bc4a45f826f37be785e954468543a5af; size=605K
wgEncodeCshlLongRnaSeqBjCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4251; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=65232b0445896ad549aeff3c22aac6d9; size=176M
wgEncodeCshlLongRnaSeqBjCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4212; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3ac499be0dc2dd45e2345d3c454fce9d; size=163M
wgEncodeCshlLongRnaSeqBjCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=be9c7f7c8aa4293a94bc062a0860b350; size=14M
wgEncodeCshlLongRnaSeqBjCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7469; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labProtocolId=037WC+,038WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=23597284c8d0ce000580d9171a60faea; size=1.4M
wgEncodeCshlLongRnaSeqBjCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4576; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapTranscriptGencV7; type=gtf; md5sum=1e5405d9b0fb8d28683f91d6067e387d; size=5.0M
wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1; type=bam; md5sum=57ceab9c0d4fa8a880bbc3156e5cd095; size=6.9G
wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1; type=bai; md5sum=bd09f50aff97d2c8a6c301d05768dbe2; size=7.5M
wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2; type=bam; md5sum=b8e87e39f989a313fd97739dc00863df; size=4.1G
wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2; type=bai; md5sum=5961d2b1bfa853265052d7469100ece5; size=6.3M
wgEncodeCshlLongRnaSeqCd20CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6026; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamContigs; type=bedRnaElements; md5sum=bc99e5aa82cdcffd5afe5451beeedc70; size=16M
wgEncodeCshlLongRnaSeqCd20CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01778,RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7015; geoSampleAccession=GSM981254; labExpId=LID44660,LID44659; bioRep=042WC,041WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4a42b4c7c0e1d934579829b837093d00; size=12M
wgEncodeCshlLongRnaSeqCd20CellPamExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6372; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=184b29dc098e48f07b8415b64b45bf23; size=20M
wgEncodeCshlLongRnaSeqCd20CellPamFastqRd1Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4d35ecfebc483186c4dc56916332eecd; size=4.9G
wgEncodeCshlLongRnaSeqCd20CellPamFastqRd1Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=90dbd6272a2bbcd4ebe3733a2dac10e9; size=4.1G
wgEncodeCshlLongRnaSeqCd20CellPamFastqRd2Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4b8896b4a027c8285ceeed41695bf39f; size=5.5G
wgEncodeCshlLongRnaSeqCd20CellPamFastqRd2Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f0b9a3a29aa3960d5d4ea83fff11f081; size=4.7G
wgEncodeCshlLongRnaSeqCd20CellPamGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01778,RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7426; geoSampleAccession=GSM981254; labExpId=LID44660,LID44659; bioRep=042WC,041WC; labProtocolId=042WC-,041WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3552416c90d24076f7a351af28c0559c; size=5.0M
wgEncodeCshlLongRnaSeqCd20CellPamGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6372; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e47735f977bbf4ee163df95e3a16cde2; size=1.9M
wgEncodeCshlLongRnaSeqCd20CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6064; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamJunctions; type=bedRnaElements; md5sum=c72663e6f8bd534b999746c628400730; size=7.3M
wgEncodeCshlLongRnaSeqCd20CellPamMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamMinusRep1; type=bigWig; md5sum=61176fc04382b397dfc4c2f298c9cbf7; size=220M
wgEncodeCshlLongRnaSeqCd20CellPamMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamMinusRep2; type=bigWig; md5sum=56caa1915f2a4202dd2571f5dc252549; size=86M
wgEncodeCshlLongRnaSeqCd20CellPamPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamPlusRep1; type=bigWig; md5sum=343d6f74fd36a167b569b33d09aac86e; size=227M
wgEncodeCshlLongRnaSeqCd20CellPamPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamPlusRep2; type=bigWig; md5sum=ae748c912504066218cc2a2f536636a8; size=88M
wgEncodeCshlLongRnaSeqCd20CellPamProtocolRep1.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=41e157dbc38488404d837a916e54298a; size=608K
wgEncodeCshlLongRnaSeqCd20CellPamProtocolRep2.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=777c0b55c3b5fe894bfe955189482ae4; size=603K
wgEncodeCshlLongRnaSeqCd20CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=bde8aec65c078e7e291fc487b7fa1d6a; size=255M
wgEncodeCshlLongRnaSeqCd20CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=15b3a73ca4c7818e382b58a9608b6afa; size=463M
wgEncodeCshlLongRnaSeqCd20CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01778,RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7426; geoSampleAccession=GSM981254; labExpId=LID44660,LID44659; bioRep=042WC,041WC; labProtocolId=042WC-,041WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=392d6e495ab0afbf24450c9bfc52ba8a; size=5.6M
wgEncodeCshlLongRnaSeqCd20CellPamTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6372; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamTranscriptGencV10; type=gtf; md5sum=b07c5ae4a050062c3792c030b9b76e61; size=4.9M
wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1; type=bam; md5sum=3b681611f7632734969a6775211432c7; size=7.2G
wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1; type=bai; md5sum=30a7d4d686184adcefdc2397e9c1fb27; size=7.0M
wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2; type=bam; md5sum=72967f4fbe72f23f6071f3cbe66773d4; size=8.6G
wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2; type=bai; md5sum=e81bb5c21d6d25de0a046611e09677b2; size=6.9M
wgEncodeCshlLongRnaSeqCd20CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6039; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapContigs; type=bedRnaElements; md5sum=2838b458d18c04699d8ec1bcaeea5a11; size=15M
wgEncodeCshlLongRnaSeqCd20CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01778,RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7014; geoSampleAccession=GSM981256; labExpId=LID44499,LID44498; bioRep=042WC,041WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3e55a399204e6662cb3c4905b60d0048; size=14M
wgEncodeCshlLongRnaSeqCd20CellPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6385; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7f026f8674978854d2fb3ee0769739c8; size=20M
wgEncodeCshlLongRnaSeqCd20CellPapFastqRd1Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f451a6b7054d0c260b17fe79166aeb0b; size=4.7G
wgEncodeCshlLongRnaSeqCd20CellPapFastqRd1Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2f25f2d0ebeacbaa0a9f77c7317bf28a; size=5.8G
wgEncodeCshlLongRnaSeqCd20CellPapFastqRd2Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=125a85aa10637006ccdc5ff5fd74abc0; size=4.9G
wgEncodeCshlLongRnaSeqCd20CellPapFastqRd2Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a2a9952c9b3b439ee233c23a188922be; size=6.0G
wgEncodeCshlLongRnaSeqCd20CellPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01778,RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7424; geoSampleAccession=GSM981256; labExpId=LID44499,LID44498; bioRep=042WC,041WC; labProtocolId=042WC+,041WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=a5f107d466a4ab73809acd77ce34d238; size=2.0M
wgEncodeCshlLongRnaSeqCd20CellPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6385; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7a33ca2fdb0a4a71d7a9974fad8e7e6f; size=1.9M
wgEncodeCshlLongRnaSeqCd20CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6067; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapJunctions; type=bedRnaElements; md5sum=802e4e7a6be6311d7f82984b4ab3d4b3; size=8.9M
wgEncodeCshlLongRnaSeqCd20CellPapMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapMinusRep1; type=bigWig; md5sum=bfaae9c78dda581888d330286bd3d2d4; size=168M
wgEncodeCshlLongRnaSeqCd20CellPapMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapMinusRep2; type=bigWig; md5sum=57c64337169fd14acdfe1770867255ae; size=153M
wgEncodeCshlLongRnaSeqCd20CellPapPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapPlusRep1; type=bigWig; md5sum=69b0ad10ac592a52edfb149eb88d1a57; size=172M
wgEncodeCshlLongRnaSeqCd20CellPapPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapPlusRep2; type=bigWig; md5sum=c49c2b194cfc2335ddd7436ee2b0a53d; size=157M
wgEncodeCshlLongRnaSeqCd20CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7673; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; labProtocolId=041WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4a98e26df739df4cb5b67f0bfdc7a043; size=375K
wgEncodeCshlLongRnaSeqCd20CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7680; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; labProtocolId=042WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=950f482fd842ebf8aee6814fa7806796; size=369K
wgEncodeCshlLongRnaSeqCd20CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9a80f0df2462e175aa92835de7a8a4bd; size=514M
wgEncodeCshlLongRnaSeqCd20CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e849a639c747a4bf7ef25251147923cb; size=762M
wgEncodeCshlLongRnaSeqCd20CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01778,RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7424; geoSampleAccession=GSM981256; labExpId=LID44499,LID44498; bioRep=042WC,041WC; labProtocolId=042WC+,041WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d7736bdbd31e84fa7d731365b45c0d88; size=2.6M
wgEncodeCshlLongRnaSeqCd20CellPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6385; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapTranscriptGencV10; type=gtf; md5sum=46e1c2678ebe0917bf1372ce710fda64; size=5.0M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1; type=bam; md5sum=d0ad5bf8958bba82824002e7ca9332a9; size=30G
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1; type=bai; md5sum=81250bab1665815dc761cfd6026435b9; size=12M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6035; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalContigs; type=bedRnaElements; md5sum=4cdfcc9c4aca2c872543f8e46a03166e; size=51M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7003; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=126155f3083472037d83338221abab63; size=12M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6380; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=35b5ecc88632e75a4ea32c8a79e5452d; size=18M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=83d23ef0654561906afcdbef965d3509; size=18G
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=e35870a1b894695dcb81f0a65ffcfba4; size=19G
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7419; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labProtocolId=043WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=d50b0b1690bd1b5200d0286d808eed33; size=4.5M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6380; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=0d22915f4d51d5c27ebb75051ef9e21b; size=1.7M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6399; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalJunctions; type=bedRnaElements; md5sum=8158d1f2a930284e0ae0945632830871; size=16M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalMinusRep1; type=bigWig; md5sum=55d6c7400492af62dc93f5ededae66c4; size=443M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalPlusRep1; type=bigWig; md5sum=50e12cf07491d82d01448573a8932505; size=460M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7665; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labProtocolId=043WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=94376ad0e56ecd1d87854696491e6297; size=395K
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=8cde1c09f200a46b75bfe548e6411c45; size=424M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7419; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labProtocolId=043WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=bb8161e4293c663233dc38575547d1ec; size=5.3M
wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6380; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalTranscriptGencV10; type=gtf; md5sum=583b87178ef42ec0692e2274c4cd4ce2; size=4.4M
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1; type=bam; md5sum=1a3f73a84e8cc76726202565cb9553ca; size=9.7G
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1; type=bai; md5sum=8b4c4066203931a016c4a6275b247c2b; size=7.4M
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2; type=bam; md5sum=7fe8124e8906f9593a59c6e1e6b21250; size=11G
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2; type=bai; md5sum=bd41a0476f825f0f88daf6edc41f479d; size=7.7M
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6b980110a21e3ce32480c5c7c40db2e9; size=7.0G
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=dc08ae29be2a96560582287fa734a700; size=6.8G
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=95be7a93faa887fa6ed9fd82cce4a32e; size=7.1G
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c9f89f5b82e9a5ad027bdecf504e0a4d; size=7.1G
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=f65d5b1cf55535bb52ae792efe178e0e; size=269M
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=adccefe27695169d299834f7feee9b42; size=971M
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=2d592b8d0a4083217c8784f7af13e1b7; size=282M
wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=6d5d8e28815734d88750ee01e85621ab; size=1021M
wgEncodeCshlLongRnaSeqGm12878CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPamContigs; type=bedRnaElements; md5sum=d68f85952a46021668eb3c251d349d37; size=19M
wgEncodeCshlLongRnaSeqGm12878CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7010; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f4f2eae882b34a6fdc863e69dde02972; size=12M
wgEncodeCshlLongRnaSeqGm12878CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4586; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=cd61a5cc3d1f2e32cce34079a7c9acf5; size=19M
wgEncodeCshlLongRnaSeqGm12878CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2dd0abfb8810f6287cfd870384f1ab1b; size=5.8M
wgEncodeCshlLongRnaSeqGm12878CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7479; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labProtocolId=003WC-,004WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0bc37a9a54259401f63a046a85f661cc; size=6.9M
wgEncodeCshlLongRnaSeqGm12878CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4586; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=93c74d80c92d314f2f118c3491995c54; size=2.0M
wgEncodeCshlLongRnaSeqGm12878CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPamJunctions; type=bedRnaElements; md5sum=19b888cd49c1bdb091ec688192c0d74a; size=6.8M
wgEncodeCshlLongRnaSeqGm12878CellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=ca4d48b3b790843a1c05fca00b9500d6; size=439K
wgEncodeCshlLongRnaSeqGm12878CellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=468307162b5a7c51402d8521aa2f7811; size=438K
wgEncodeCshlLongRnaSeqGm12878CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4298; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=483f64bbaf7d5acf9bf78c56c480c22d; size=231M
wgEncodeCshlLongRnaSeqGm12878CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4288; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4a49b79031595eef9b12b6b91e7d69be; size=142M
wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d6b9e9c1aa150a3aaf7a10e7c3b3ac7c; size=27M
wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7479; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labProtocolId=003WC-,004WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4abf445878c8290b90a2ab18192675c1; size=7.4M
wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4586; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptGencV7; type=gtf; md5sum=8455a925659e0f248a9b76fac0ef6403; size=4.8M
wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1; type=bam; md5sum=ef50cfac8b54beae2e40b510516dbfbe; size=13G
wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1; type=bai; md5sum=daa9acb76bbb00b29f5a406fb8bd80c6; size=7.3M
wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2; type=bam; md5sum=d5c629b8f777487a31f8b47d0851675e; size=15G
wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2; type=bai; md5sum=4899891103e3066dee2bb3f182cd7dd3; size=7.5M
wgEncodeCshlLongRnaSeqGm12878CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapContigs; type=bedRnaElements; md5sum=e3fd7afcc99cc3081cd3d54df22221ca; size=13M
wgEncodeCshlLongRnaSeqGm12878CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6959; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=369fd86d3522a77625f1397380935dea; size=7.5M
wgEncodeCshlLongRnaSeqGm12878CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4571; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1bec86074ff5743e65682ac1787e323d; size=19M
wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=84f543d1cf92a7f36dfe4deed4d44b47; size=8.1G
wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2749ae678910489f1a7560c35b4ef79b; size=9.0G
wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7ad2db3a9854a2e10ceabc3b09db7f65; size=8.1G
wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b74c4256a8f3b9cde34e5101c16954e5; size=9.2G
wgEncodeCshlLongRnaSeqGm12878CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a5b94a0922c374dabff468c903ded60b; size=2.1M
wgEncodeCshlLongRnaSeqGm12878CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7465; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labProtocolId=003WC+,004WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=13817442a2335487682e07da2dfdf33d; size=2.4M
wgEncodeCshlLongRnaSeqGm12878CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4571; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9d3e2c261ec319ed7a1de34e397b865b; size=2.1M
wgEncodeCshlLongRnaSeqGm12878CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapJunctions; type=bedRnaElements; md5sum=9f7e7cfa7e3ce4da05ddcde84f572d43; size=9.1M
wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep1; type=bigWig; md5sum=4b2ec164f0172da8d2c2e31d1db78834; size=807M
wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep2; type=bigWig; md5sum=8ae303919ed45aac5bd48587ad8d92d2; size=826M
wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep1; type=bigWig; md5sum=2edf2618c543cbc0e7fcf4cfac7404be; size=844M
wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep2; type=bigWig; md5sum=cdd45d6f623ee8e0c5df429c8b24b601; size=861M
wgEncodeCshlLongRnaSeqGm12878CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=43418598be7729e08a4a3201d1d6baa6; size=1.4M
wgEncodeCshlLongRnaSeqGm12878CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1b9fbf29f0acfe3a6011b352b00acce3; size=1.4M
wgEncodeCshlLongRnaSeqGm12878CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4260; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d8c66cf0c13efadaf1451a5c95df6cdd; size=596M
wgEncodeCshlLongRnaSeqGm12878CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4201; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3e65f7905f148e7a30eeabe8602caa2d; size=380M
wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=96c6e06a3290c25ca4dcb878fb18bc99; size=16M
wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7465; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labProtocolId=003WC+,004WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9069eb6cdc02a41a610e0152b8458498; size=2.9M
wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4571; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptGencV7; type=gtf; md5sum=9493af1fc32e35bc312acbcdf0f21570; size=5.0M
wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1; type=bam; md5sum=dcd233c01bc856e5cc496b7d49771d67; size=4.7G
wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1; type=bai; md5sum=364ba68eb832dec9378ab620aa386c9d; size=5.8M
wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2; type=bam; md5sum=2e931b7df0bb6175b28bb20d6979fe36; size=4.2G
wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2; type=bai; md5sum=03e95a1c6d93214801996337494afb49; size=5.1M
wgEncodeCshlLongRnaSeqGm12878CellTotalFastqRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840138; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=462b83b5e97c42e67687c9eeb3f90fae; size=8.7G
wgEncodeCshlLongRnaSeqGm12878CellTotalFastqRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840138; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=5afae9e6c83681896b94f62665754df1; size=7.6G
wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep1; type=bigWig; md5sum=cadc625e69182fb0af58e4e6a48b2687; size=267M
wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep2; type=bigWig; md5sum=6cacaa26ba8546a42ded06e443bca381; size=203M
wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep1; type=bigWig; md5sum=9ca68b5ab1aab4a0768f949edc2c34d2; size=278M
wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep2; type=bigWig; md5sum=bb977f7faab0e17a5288a2a63d0aac18; size=212M
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1; type=bam; md5sum=5ce26b26feaf8cae59cf91f9cfa91aef; size=8.7G
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1; type=bai; md5sum=83e62af7f48eb3b3e35cf764bc19c560; size=4.8M
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2; type=bam; md5sum=5c328902e347e5bc91832d467e581821; size=9.0G
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2; type=bai; md5sum=adfda10dee177b0b7fc4421cf2aa71c0; size=4.8M
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cae7d64006174ab9cfc0dac43d0002c6; size=5.1G
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=11c2ca98e4a0c4df7b981fa628eaa2aa; size=5.2G
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cbbba9c38b8977d90a74c6a11c0806c1; size=5.7G
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5a071d9103cd7efad6de52c41370a91b; size=5.9G
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=5e085ddb9bec9e0cdb7dd365ad1e38f9; size=24M
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=5320df60c493b62323159ba8902045ac; size=29M
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=f32c7e5690e6312bd283e778318345ce; size=24M
wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a4493f8c3c86fa48cd6cbdaaf5978ed9; size=30M
wgEncodeCshlLongRnaSeqGm12878CytosolPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPamContigs; type=bedRnaElements; md5sum=588a4beea267d3776ee2f11b68ccbeff; size=5.2M
wgEncodeCshlLongRnaSeqGm12878CytosolPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6948; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=294be67b1ab4c474bdc4b285381ef76f; size=4.8M
wgEncodeCshlLongRnaSeqGm12878CytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4559; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f84d867b62786f9dd064ca1ec1d65f2b; size=17M
wgEncodeCshlLongRnaSeqGm12878CytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=dae43d5579499bd35d3ab744d8a93adf; size=604K
wgEncodeCshlLongRnaSeqGm12878CytosolPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7453; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labProtocolId=003C-,004C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b23ffe4424db730a7206a9aeaef09dca; size=818K
wgEncodeCshlLongRnaSeqGm12878CytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4559; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fa7a8232cbbbda478e5b3a51de10e654; size=2.0M
wgEncodeCshlLongRnaSeqGm12878CytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPamJunctions; type=bedRnaElements; md5sum=6eabd58ef6b416a8097364ad48832a4c; size=2.5M
wgEncodeCshlLongRnaSeqGm12878CytosolPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=53cb051ca1faed18b64f982116293ef4; size=493K
wgEncodeCshlLongRnaSeqGm12878CytosolPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=11b00c97573b3943293fb3798b485fcc; size=498K
wgEncodeCshlLongRnaSeqGm12878CytosolPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4195; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=215e86d2ce31d9ebd93433601339c98f; size=230M
wgEncodeCshlLongRnaSeqGm12878CytosolPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4292; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c2f2f8e53d2fd13356d9d23f26d6a198; size=259M
wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=95a064128b9a9acc673f698cc434d66b; size=4.7M
wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7453; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labProtocolId=003C-,004C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1f476a3081e75b9dce7b68a39358b3bf; size=1.2M
wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4559; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptGencV7; type=gtf; md5sum=b89111f73510e97ec39294162bc8a91c; size=4.4M
wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1; type=bam; md5sum=d6af952f8274ec254961f0396ac8c60d; size=13G
wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1; type=bai; md5sum=9e350d10b4bbb2ade1f9810f984b2142; size=6.8M
wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2; type=bam; md5sum=6b002f30c7301a45f850db4c171dc5c2; size=9.2G
wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2; type=bai; md5sum=84a09bd85bbf8f76ac7e2dcca608d3ea; size=6.6M
wgEncodeCshlLongRnaSeqGm12878CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapContigs; type=bedRnaElements; md5sum=f047bd8aba73772997ce3c67a1c617a5; size=12M
wgEncodeCshlLongRnaSeqGm12878CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6944; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e1e27a5447754251049d811838cbfb8f; size=6.1M
wgEncodeCshlLongRnaSeqGm12878CytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4553; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7b7ad3f06e434958e7e63612d0c52f30; size=19M
wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a1ae3657fe595fdf38f6b55381f8cad7; size=8.2G
wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b6b464edc8e5d6ce457547236801ff90; size=5.8G
wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fa54c1dc9d0803e6c2b4888fd2a94453; size=8.5G
wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a87571f6b678ab016e2182247e1fa7c3; size=6.0G
wgEncodeCshlLongRnaSeqGm12878CytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=08bd6127085b77f8c91f36515ed024cd; size=1.3M
wgEncodeCshlLongRnaSeqGm12878CytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7448; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labProtocolId=003C+,004C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=aea173027ba9549476f0d68d7b699050; size=1.2M
wgEncodeCshlLongRnaSeqGm12878CytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4553; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a1f08997dd55699ccd91a216a9a8602d; size=2.0M
wgEncodeCshlLongRnaSeqGm12878CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapJunctions; type=bedRnaElements; md5sum=7b90596871bd34ba878c4cb15aeb9e09; size=9.3M
wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep1; type=bigWig; md5sum=49d31ed4be23c30264fdbbdcbc25f884; size=445M
wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep2; type=bigWig; md5sum=1f90f73e1e748608ed25d4cba71800b2; size=425M
wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep1; type=bigWig; md5sum=d1a4b6a52a61d2b38cecf77e30259fe9; size=457M
wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep2; type=bigWig; md5sum=f100b30fde8819a023878d27bd4d7691; size=437M
wgEncodeCshlLongRnaSeqGm12878CytosolPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b14b590331262214899151fc8bcaf37d; size=954K
wgEncodeCshlLongRnaSeqGm12878CytosolPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bd7b69dff52cf717f77f8bf41c4a9094; size=960K
wgEncodeCshlLongRnaSeqGm12878CytosolPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4276; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=bd305b2338a257d984d2a606ef821025; size=78M
wgEncodeCshlLongRnaSeqGm12878CytosolPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4231; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5c0aa569da3d31c0b46c31cce8683382; size=43M
wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e9f2c427cd77637479dea7863ad57be5; size=14M
wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7448; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labProtocolId=003C+,004C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ae6075ea0f0741467c1b698504d77962; size=1.6M
wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4553; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptGencV7; type=gtf; md5sum=5ab9dadaad4224e4e450cbc41c42bc87; size=5.0M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3; type=bam; md5sum=7f65b29761b2ff70b68e2dc64f5ab397; size=32G
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3; type=bai; md5sum=88650ace2130a350869eb6e266f8821c; size=11M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4; type=bam; md5sum=bf93db27957f49c9f3b56526b82b7cf4; size=28G
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4; type=bai; md5sum=b526d5e31be34e68ebf2a5071aab3dfc; size=11M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-28; subId=7194; geoSampleAccession=GSM984605; labExpId=LID47963,LID47964; bioRep=091NL,092NL; labProtocolId=091NLt,092NLt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalContigs; type=bedRnaElements; md5sum=c60dcc7cac52aef8f8482e04216a6ef9; size=21M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4449a8131c25557a8b635f6d3d267011; size=18G
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=a450a51faa2dc8e6fb566554bd5be639; size=16G
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d7b811e42386fc8b39117335f073ad11; size=19G
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=b207c0c3809671f4287b4a80fec732ac; size=16G
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-28; subId=7196; geoSampleAccession=GSM984605; labExpId=LID47963,LID47964; bioRep=091NL,092NL; labProtocolId=091NLt,092NLt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalJunctions; type=bedRnaElements; md5sum=c36f7037494b13ab5254e0b2a7fa951d; size=23M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep3; type=bigWig; md5sum=fa06154a5e203a38d380178c2ffbeb21; size=690M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep4; type=bigWig; md5sum=4b19532f6d465d5414284137911459f6; size=631M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep3; type=bigWig; md5sum=09a8c27daf1397450aed01e243205c9e; size=722M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep4; type=bigWig; md5sum=a1bb7e17049640d96a2cbbfac24a5801; size=659M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; subId=7816; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=02bcebe8a0ce9b2a4e778510f09b0d56; size=293K
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; subId=7815; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=eba3d27817a2efec3c26ad474c29ba1d; size=288K
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=4b0ae5c6267637a75467dd2b41679519; size=176M
wgEncodeCshlLongRnaSeqGm12878NucleolusTotalSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=b796224c569c1da56f329bbedb1c143b; size=115M
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1; type=bam; md5sum=b32c92e3bbe827be3be546b72e8f040f; size=12G
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1; type=bai; md5sum=764ce8f1f0d9934b778a3e49df721000; size=7.4M
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2; type=bam; md5sum=12a595c26af0bfa2735cbf9ef0b334be; size=12G
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2; type=bai; md5sum=baa61168c5b67302cb49cd68910ef05e; size=7.6M
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc2d1f89863f7d49b5561d2ff19ec270; size=7.0G
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5e67d5ad2378954dac6d7257ab42cd50; size=6.8G
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5f7b34f801f5bd2733df18abb149c823; size=7.0G
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=44ae101c1bf9b7826c9951b52692bc7f; size=6.9G
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=283c83c7ce7bae14595bee7213e52645; size=352M
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=d924ac0849191629d21b4855211cc312; size=387M
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=c7981359e0191f555ebed15ad3c51b1a; size=370M
wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=278e344f7123faeb36e08e64ac2c6df6; size=408M
wgEncodeCshlLongRnaSeqGm12878NucleusPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPamContigs; type=bedRnaElements; md5sum=cf4327870ebc06b3014a7146279146d6; size=16M
wgEncodeCshlLongRnaSeqGm12878NucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6936; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b24670957a13835476d272eb69643cbe; size=13M
wgEncodeCshlLongRnaSeqGm12878NucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4548; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fdebe77f001278d1cf724e2e7e57ac3c; size=18M
wgEncodeCshlLongRnaSeqGm12878NucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ef14e83b3f283793ea40a9ca013e291b; size=8.0M
wgEncodeCshlLongRnaSeqGm12878NucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7443; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labProtocolId=003N-,004N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=34f00aac7bc9a743e91034f31ac06048; size=9.1M
wgEncodeCshlLongRnaSeqGm12878NucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4548; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b404b04740c9d05525303ddd219d0a7d; size=2.0M
wgEncodeCshlLongRnaSeqGm12878NucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPamJunctions; type=bedRnaElements; md5sum=34d1e53e245de0e604e17687f73c5677; size=6.4M
wgEncodeCshlLongRnaSeqGm12878NucleusPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=6575c2058d48dd1a21c4153ef333b65a; size=433K
wgEncodeCshlLongRnaSeqGm12878NucleusPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=ba7b60a7f1e964098438e17b9d603a3c; size=430K
wgEncodeCshlLongRnaSeqGm12878NucleusPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4215; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=397704a68455fa92aac1240c253e559f; size=194M
wgEncodeCshlLongRnaSeqGm12878NucleusPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4209; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6612d5d0a231072656dbc1eda7af77d1; size=123M
wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ba909fa46154d4041a0231998f48cb14; size=38M
wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7443; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labProtocolId=003N-,004N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=25d94a1ebb57280fafe1e0ccb9adb9db; size=9.7M
wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4548; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptGencV7; type=gtf; md5sum=58ffa71c7a4a6647ce8c296e244691a9; size=4.7M
wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1; type=bam; md5sum=94d505d54ee07a68e2a0afb193a8b565; size=15G
wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1; type=bai; md5sum=7487261f6ee3200dd9aa12b768e82545; size=8.1M
wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2; type=bam; md5sum=8e859e16bf00ff71cf55ffc322ac6126; size=13G
wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2; type=bai; md5sum=9715cd9a9d52c65920c02b07fbda3c7a; size=7.7M
wgEncodeCshlLongRnaSeqGm12878NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapContigs; type=bedRnaElements; md5sum=6f5e26cc17c36b63dbf6591d2797427b; size=17M
wgEncodeCshlLongRnaSeqGm12878NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6981; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1fc3d65d77e05240e3482d8572d4ff32; size=7.8M
wgEncodeCshlLongRnaSeqGm12878NucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4601; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=124aa41c8c51ceeedc189865951d2b6a; size=19M
wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1c5c74e824e949024be76652adf53bbb; size=8.7G
wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=91a109ea3435de4ce301abc4e7b1f92a; size=7.6G
wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1f5b9f02a2c212e704900b37f2262f8b; size=8.9G
wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=df3c4fd68fc8a91f42f41d05aa490508; size=7.8G
wgEncodeCshlLongRnaSeqGm12878NucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d3b5fe23587350a70f8572dce9900acf; size=4.0M
wgEncodeCshlLongRnaSeqGm12878NucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7494; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labProtocolId=003N+,004N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=dad311c5e25bd468fc8e3eab75256bf6; size=3.5M
wgEncodeCshlLongRnaSeqGm12878NucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4601; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6d16e1cb873a206f8fa7e142e33ed350; size=2.1M
wgEncodeCshlLongRnaSeqGm12878NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapJunctions; type=bedRnaElements; md5sum=9e86ea08631e42b94293a0c3f0df89e8; size=13M
wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep1; type=bigWig; md5sum=10d233aebd8034afb482997de40d2681; size=1.2G
wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep2; type=bigWig; md5sum=75bfde2a99aecb7b2682e97f8e2f676f; size=1.2G
wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep1; type=bigWig; md5sum=d6ff052c7dbd870e814b14412a3311d8; size=1.2G
wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep2; type=bigWig; md5sum=2cb8be0f9da7a89b66bc76d766d1c639; size=1.2G
wgEncodeCshlLongRnaSeqGm12878NucleusPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=54a5e4f16ec0119f59ba78d0d7b4a680; size=680K
wgEncodeCshlLongRnaSeqGm12878NucleusPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=000efc74ebd1747852f26cc489f016b3; size=663K
wgEncodeCshlLongRnaSeqGm12878NucleusPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4290; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3e615ebb2cce9d3642919e176ae5b977; size=85M
wgEncodeCshlLongRnaSeqGm12878NucleusPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4235; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=cca01e0179dd052fcbe9c9c8ac4f5cd2; size=72M
wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5a7317d04ad9c83757d00ce2c02d40f5; size=26M
wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7494; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labProtocolId=003N+,004N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c332b925e874673d309450c5aac603c3; size=3.9M
wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4601; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptGencV7; type=gtf; md5sum=df234c828abefc772096a7de60377bb2; size=5.0M
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1; type=bam; md5sum=6587e586e376b989854a3040fa929b95; size=10G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1; type=bai; md5sum=9665e433d9bf71c259ba331df36d71b9; size=7.8M
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2; type=bam; md5sum=36059f397cf60b1e8ea84869370fc020; size=9.7G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2; type=bai; md5sum=97b5487eecfb086676efc7ecb1b73a46; size=7.8M
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0ac00753f03075f147ed811301f6346f; size=7.0G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=00776d5b2e65d39fa40fc75d5cd4dda5; size=6.7G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=74f3a3142687398fac3e959c0815a849; size=7.3G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2d6c22c27bfcfbc3f55ff17b9e28957b; size=7.0G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=1459ea72e379f4bd3e0bc95c1d312bf0; size=978M
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=a8d9bffedf9ef92fccc7ae258497fe96; size=1013M
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=db427450bbe33bbacef6827974d5991c; size=1.1G
wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=9412fbc46be578063753f90581b0244e; size=1.1G
wgEncodeCshlLongRnaSeqH1hescCellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPamContigs; type=bedRnaElements; md5sum=4b3ce0510f29bde9d53ddc0c5c581848; size=23M
wgEncodeCshlLongRnaSeqH1hescCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6974; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=5ba124d1bba5b8367433f7ffd4e94df6; size=12M
wgEncodeCshlLongRnaSeqH1hescCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4593; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0857ea5b411432532b9353c20ef7de0; size=19M
wgEncodeCshlLongRnaSeqH1hescCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c8722d22c9275939464c210971cfde1b; size=4.7M
wgEncodeCshlLongRnaSeqH1hescCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7486; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labProtocolId=005WC-,006WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c09d9cb7b20fa91dc52ea17d98627cd3; size=6.2M
wgEncodeCshlLongRnaSeqH1hescCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4593; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fbfbfe3bc4ce12d93d16badbc1ebfe42; size=2.1M
wgEncodeCshlLongRnaSeqH1hescCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPamJunctions; type=bedRnaElements; md5sum=8da3bd5b322040a9d27cf42b28ff686a; size=7.4M
wgEncodeCshlLongRnaSeqH1hescCellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=acacc8ac30e9d17a94d808d0fe052fa2; size=435K
wgEncodeCshlLongRnaSeqH1hescCellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=c71467bda89291016b83ed056f4605c7; size=435K
wgEncodeCshlLongRnaSeqH1hescCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4226; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=ec89b5158a63ef196239a7c1268ca72e; size=210M
wgEncodeCshlLongRnaSeqH1hescCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4239; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b7e0143de840f52e9a66bc44ce12e87d; size=199M
wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=010bd3b0b65db9e92dc23834d887566d; size=23M
wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7486; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labProtocolId=005WC-,006WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b4a1a27855cb304f8c72348187fb783; size=6.8M
wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4593; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptGencV7; type=gtf; md5sum=ec694f5f753af8b0f8b0236a28f43909; size=4.9M
wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1; type=bam; md5sum=9dabe8fa9819a00a4ba8bb634b4e7e61; size=14G
wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1; type=bai; md5sum=8e43fd77132b680b46d6dcb8e6000a92; size=7.4M
wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2; type=bam; md5sum=458f9da89a28a39425dca1d224faa227; size=11G
wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2; type=bai; md5sum=ad9c441e1185b46c833c5f305e9f94ea; size=7.1M
wgEncodeCshlLongRnaSeqH1hescCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapContigs; type=bedRnaElements; md5sum=78a6e5af93abb41f03acd53ae57e0e30; size=20M
wgEncodeCshlLongRnaSeqH1hescCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6972; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ee8a134ad51c9f9b2ce7251b78fafbd6; size=7.7M
wgEncodeCshlLongRnaSeqH1hescCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4592; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0ea45ca7430d0c34ebb24c944b8da81; size=19M
wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3e5aef31355e188731b4f0e9988b1e65; size=8.1G
wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1cd19e04f2194bd528607a5468179163; size=6.8G
wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3e25f46499f7c2ee448007ee34194c32; size=8.3G
wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7d19d87f3e61ecf2c1be96ebbd1ef66c; size=6.9G
wgEncodeCshlLongRnaSeqH1hescCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5c370cd0105db9837ef04d8aa0505af5; size=2.1M
wgEncodeCshlLongRnaSeqH1hescCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7485; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labProtocolId=005WC+,006WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bde3297dbe2c5d5b2dc10f50f17811ab; size=2.0M
wgEncodeCshlLongRnaSeqH1hescCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4592; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3e912334a1f731fe1de54b792f3d5bc0; size=2.1M
wgEncodeCshlLongRnaSeqH1hescCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapJunctions; type=bedRnaElements; md5sum=aa751f5d2b71f86a05808c9def152ed9; size=9.9M
wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep1; type=bigWig; md5sum=48f840994b1c0d9705409a1f4566d0ca; size=705M
wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep2; type=bigWig; md5sum=b77ebc1983989795f0c9def09f6622ed; size=608M
wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep1; type=bigWig; md5sum=2655b4036e2193b4d0d1648d88101b21; size=739M
wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep2; type=bigWig; md5sum=ca7cbf571fc15cb83af527bf7c7b77a9; size=636M
wgEncodeCshlLongRnaSeqH1hescCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=452993de86eb398a9dc7777f41b080a9; size=1.2M
wgEncodeCshlLongRnaSeqH1hescCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b1e877c1253a348f304b14f41058605d; size=1.1M
wgEncodeCshlLongRnaSeqH1hescCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4223; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2cd4061a0d6275b6124f1a4677de004f; size=17M
wgEncodeCshlLongRnaSeqH1hescCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4265; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=0c035cece8dff21c946d52fd87ab2e4b; size=20M
wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b37fe5a16622424916b483bffa9eb9df; size=19M
wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7485; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labProtocolId=005WC+,006WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e5e747195a6352cd522cf8d76ed35584; size=2.5M
wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4592; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptGencV7; type=gtf; md5sum=cdc28cc78fac341a5df61f605c71e98b; size=5.1M
wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2; type=bam; md5sum=8231e66c25359651f21d589872b2ec0d; size=4.7G
wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2; type=bai; md5sum=82d09fd0c676def20021b2adf1c832b5; size=5.2M
wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2dae419d63cc41b74d6690b7804e329c; size=2.9G
wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=12857a667d3c2a89ed7317653caa8cf2; size=3.1G
wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=bc0fc5389801c015f08204260af3c9e0; size=39M
wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=48cdf386743565a8cb81e6e1b76f3054; size=40M
wgEncodeCshlLongRnaSeqH1hescCytosolPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamContigs; type=bedRnaElements; md5sum=64729e3a52e43964b8814a5597ac3742; size=15M
wgEncodeCshlLongRnaSeqH1hescCytosolPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamContigsV2; type=bedRnaElements; md5sum=9c80466f57606bf14dde4c40c379a673; size=15M
wgEncodeCshlLongRnaSeqH1hescCytosolPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6930; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=07ab029e2d7af15e91291d16d820a42f; size=3.9M
wgEncodeCshlLongRnaSeqH1hescCytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4542; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=41bdfc4eed5b8b51b4cbe2029ec71923; size=16M
wgEncodeCshlLongRnaSeqH1hescCytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4defbc733193d97212c3754237e3de29; size=597K
wgEncodeCshlLongRnaSeqH1hescCytosolPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7435; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labProtocolId=006C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f34328996d105f39ea5b07b85492a5f1; size=688K
wgEncodeCshlLongRnaSeqH1hescCytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4542; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0a609ed4583d429e84166a5c5020cc8; size=1.8M
wgEncodeCshlLongRnaSeqH1hescCytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamJunctions; type=bedRnaElements; md5sum=bd43a50643e2de5fdcfa03e015d272a1; size=2.0M
wgEncodeCshlLongRnaSeqH1hescCytosolPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=47256509c23d8601ddb605559c61dfaa; size=495K
wgEncodeCshlLongRnaSeqH1hescCytosolPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4185; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=f8bb1dec752969f64510095fdf732e31; size=136M
wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e65c0ae5a928665d3691f69ffe13db58; size=4.7M
wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7435; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labProtocolId=006C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7aa7db124977c3d5dc5cd4dc714e91f3; size=1.1M
wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4542; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptGencV7; type=gtf; md5sum=f86b898f0262b8a9f665c8cfbf821380; size=4.1M
wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2; type=bam; md5sum=350490d4a0accd1d6746fb0ef32559f7; size=10G
wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2; type=bai; md5sum=9e087d6bb68d71cc35ad9a027f58ae3b; size=7.0M
wgEncodeCshlLongRnaSeqH1hescCytosolPapContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapContigs; type=bedRnaElements; md5sum=1f04425ae2bc49731463433b4e4f8f00; size=18M
wgEncodeCshlLongRnaSeqH1hescCytosolPapContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapContigsV2; type=bedRnaElements; md5sum=c17352057543efe23a38a032d5206ae8; size=18M
wgEncodeCshlLongRnaSeqH1hescCytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7007; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fb9a7ef5ef48a4b47b1984704a824e6d; size=5.9M
wgEncodeCshlLongRnaSeqH1hescCytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4582; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=facca7b41e035f10db758f5ebba0625a; size=17M
wgEncodeCshlLongRnaSeqH1hescCytosolPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1baa03edae04f55a2ac39d56df382866; size=6.2G
wgEncodeCshlLongRnaSeqH1hescCytosolPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3a362cf06c97d3ebaee0756b54fde35b; size=6.4G
wgEncodeCshlLongRnaSeqH1hescCytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b66dfcc78bea3683a27ff42c816eb7b7; size=1.1M
wgEncodeCshlLongRnaSeqH1hescCytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7475; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labProtocolId=006C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=940dd0021ee554eb679b6f342d20024a; size=949K
wgEncodeCshlLongRnaSeqH1hescCytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4582; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c008bb8e2df6737eb0994d68f3fcedbe; size=1.9M
wgEncodeCshlLongRnaSeqH1hescCytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapJunctions; type=bedRnaElements; md5sum=7864af4790692f5ac939e49e8d72d620; size=6.5M
wgEncodeCshlLongRnaSeqH1hescCytosolPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapMinusRawSigRep2; type=bigWig; md5sum=fb64f13b01908023eb72f7d55fe2f9da; size=614M
wgEncodeCshlLongRnaSeqH1hescCytosolPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapPlusRawSigRep2; type=bigWig; md5sum=91c6ddc34ae22add45c8dc8995f2aa90; size=640M
wgEncodeCshlLongRnaSeqH1hescCytosolPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=5a5238345eadeb349d9811169fb7eeb1; size=1.2M
wgEncodeCshlLongRnaSeqH1hescCytosolPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4280; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8164939d1b1cdf14a015adafe3251bb5; size=50M
wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0488d9106305f5f568cd4ef81ef63700; size=12M
wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7475; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labProtocolId=006C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=404b53e8f5e381928f95be2a21cb09af; size=1.4M
wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4582; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptGencV7; type=gtf; md5sum=e0a1adb811dbc02b077471438694c58b; size=4.4M
wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2; type=bam; md5sum=da4d32efab8724e163ddc4aaf067cf46; size=8.6G
wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2; type=bai; md5sum=d6b69acb1e1b42e680a21c711c5c8183; size=7.3M
wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=615246d77d6220e46909b07306a5739a; size=5.3G
wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=eecb69785729ef18cb36c62cdd714522; size=5.4G
wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=1e5b7a30777eb17c3c13855956772da4; size=282M
wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=192709bb1092dbb61cf4b4084a223d5c; size=300M
wgEncodeCshlLongRnaSeqH1hescNucleusPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamContigs; type=bedRnaElements; md5sum=3fc46419a04be282e18a82a47ba119b6; size=30M
wgEncodeCshlLongRnaSeqH1hescNucleusPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamContigsV2; type=bedRnaElements; md5sum=6ae8fee3d1783de59058c2b87accac61; size=31M
wgEncodeCshlLongRnaSeqH1hescNucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7019; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f3d3e5332869351903b695461963d1fc; size=11M
wgEncodeCshlLongRnaSeqH1hescNucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4590; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fd45178ad296596be4f257b1d0112846; size=16M
wgEncodeCshlLongRnaSeqH1hescNucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=47c04c87f7f8a865fe4ab821d1283687; size=5.4M
wgEncodeCshlLongRnaSeqH1hescNucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7483; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labProtocolId=006N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=7e667881ead92e2485b5bf4379b10477; size=6.5M
wgEncodeCshlLongRnaSeqH1hescNucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4590; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3e765235b5501d8d18df6ffd6dabd2bb; size=1.9M
wgEncodeCshlLongRnaSeqH1hescNucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamJunctions; type=bedRnaElements; md5sum=9f519ebfce233184c0c644c29e0ad225; size=3.8M
wgEncodeCshlLongRnaSeqH1hescNucleusPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=428a41c77c161b82eec28b70d6d45eea; size=423K
wgEncodeCshlLongRnaSeqH1hescNucleusPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4287; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e1850cfd66a872ddf0a0639de065af23; size=148M
wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=899c8b53877ccfdf9ef0dcdee4976254; size=27M
wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7483; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labProtocolId=006N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=509d49df5c7fe202b5458f75d67d82eb; size=7.6M
wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4590; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptGencV7; type=gtf; md5sum=4e10275fc335bb20ab1b7ef7cf8ea6c8; size=4.3M
wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2; type=bam; md5sum=0aee237b1e06812fca29dee76a513af6; size=11G
wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2; type=bai; md5sum=6a12fedb69dcde7448196df95ad85b65; size=7.7M
wgEncodeCshlLongRnaSeqH1hescNucleusPapContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapContigs; type=bedRnaElements; md5sum=36deddc56093445edf48667ef244ec15; size=28M
wgEncodeCshlLongRnaSeqH1hescNucleusPapContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapContigsV2; type=bedRnaElements; md5sum=176c4e16dd881a0bd718857f5a58fa25; size=28M
wgEncodeCshlLongRnaSeqH1hescNucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6999; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9919fe8c144b4089acc81a568cb4d765; size=7.6M
wgEncodeCshlLongRnaSeqH1hescNucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4570; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4066ad6464b7597e2094a737a3a79eb3; size=17M
wgEncodeCshlLongRnaSeqH1hescNucleusPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3fdfe0196a4bb1c07f836a500b8c5b0c; size=6.8G
wgEncodeCshlLongRnaSeqH1hescNucleusPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=829d61847bc20a2b6316fb905ef47496; size=6.9G
wgEncodeCshlLongRnaSeqH1hescNucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f4d902fd1ad922d41c6e96f755244377; size=2.5M
wgEncodeCshlLongRnaSeqH1hescNucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7463; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labProtocolId=006N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fcf72a0df06aaad67793184aa6856b00; size=2.7M
wgEncodeCshlLongRnaSeqH1hescNucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4570; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2daba672a0149f586c6bb7600ec3975c; size=1.9M
wgEncodeCshlLongRnaSeqH1hescNucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapJunctions; type=bedRnaElements; md5sum=b707c8043b87b986a062d2891317ee7f; size=6.6M
wgEncodeCshlLongRnaSeqH1hescNucleusPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapMinusRawSigRep2; type=bigWig; md5sum=6f97cdc336e074180f449c60724ba62a; size=882M
wgEncodeCshlLongRnaSeqH1hescNucleusPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapPlusRawSigRep2; type=bigWig; md5sum=ec3c832062261141ec75fed2f2561a30; size=920M
wgEncodeCshlLongRnaSeqH1hescNucleusPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a5922c7cf5472bfad51741aaba929a2a; size=573K
wgEncodeCshlLongRnaSeqH1hescNucleusPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4270; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=110184cbe5abc0dccdc820dc7f775ea9; size=144M
wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e0112810b25b82608cada28e948c10a3; size=18M
wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7463; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labProtocolId=006N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b9cdbf457f4a392bad2171b46a6fce53; size=3.4M
wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4570; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptGencV7; type=gtf; md5sum=ecb8ac1a6b0d7b6c57de2792f5500c71; size=4.4M
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2; type=bam; md5sum=c0d0cf8f07632805bb735abe87c17ccb; size=25G
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2; type=bai; md5sum=a63cd672d49b7522c899b1f0772f0b0e; size=9.2M
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=aec49289304649e000aa16327b32df6b; size=16G
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dc5284a25b783eceb25dfe80f7b0c67b; size=16G
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalMinusRep2; type=bigWig; md5sum=09f5a3a6ab33e4e4fdf3ca41c63fe8e6; size=367M
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalPlusRep2; type=bigWig; md5sum=eab3ba43b807f302a1630797eeae5b0c; size=374M
wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=65ebed69f15969e0ac4395ccb61121d4; size=190M
wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1; type=bam; md5sum=1995bd76774f0f0edee755824b8c43fe; size=20G
wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1; type=bai; md5sum=db8089847d54b33a57663b2edbbfcdf1; size=12M
wgEncodeCshlLongRnaSeqHaoafCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11,6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7193; geoSampleAccession=GSM984614; labExpId=LID47021,LID47020; bioRep=056WC,055WC; labProtocolId=056WCt,055WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalContigs; type=bedRnaElements; md5sum=34d9699c6e975fefb0ed9aed90c8f6ac; size=19M
wgEncodeCshlLongRnaSeqHaoafCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6988; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=2694a571a367f0ee201662729bef8771; size=15M
wgEncodeCshlLongRnaSeqHaoafCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6368; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fbcd4158874cbbfaa1a36ebf9b82e5e2; size=18M
wgEncodeCshlLongRnaSeqHaoafCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4545a4ff57f7f2fb0f890d8a3fd6a228; size=18G
wgEncodeCshlLongRnaSeqHaoafCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=96439e78fb98dca3ca993cddde0de84d; size=18G
wgEncodeCshlLongRnaSeqHaoafCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7406; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labProtocolId=056WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=a0a4c59dcea249f3f8b72f0121cbdc23; size=3.8M
wgEncodeCshlLongRnaSeqHaoafCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6368; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=30a677e742c263fef277f81a2cf4b001; size=1.6M
wgEncodeCshlLongRnaSeqHaoafCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11,6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-28; subId=7195; geoSampleAccession=GSM984614; labExpId=LID47021,LID47020; bioRep=056WC,055WC; labProtocolId=056WCt,055WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalJunctions; type=bedRnaElements; md5sum=c80e69edc0c4c6b7e1cd704bdca7bb68; size=19M
wgEncodeCshlLongRnaSeqHaoafCellTotalMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalMinusSignalRep1; type=bigWig; md5sum=bcb10e1f55639687f6e44222641a2744; size=127M
wgEncodeCshlLongRnaSeqHaoafCellTotalPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalPlusSignalRep1; type=bigWig; md5sum=7609eff7681ef2c5136d7f153b384e2c; size=130M
wgEncodeCshlLongRnaSeqHaoafCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=e8bda9a226ac7fd929c555822881c5ea; size=297K
wgEncodeCshlLongRnaSeqHaoafCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=306d35582cb87aab0e95c7d5cc8120d9; size=189M
wgEncodeCshlLongRnaSeqHaoafCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7406; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labProtocolId=056WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=642d004d26edbe002ade3b67c3c55f38; size=4.6M
wgEncodeCshlLongRnaSeqHaoafCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6368; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalTranscriptGencV10; type=gtf; md5sum=a2eabbc479506e95f68652076a39acb8; size=4.4M
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1; type=bam; md5sum=f20dfe9e07574742d8e8a96076cad9a4; size=25G
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1; type=bai; md5sum=cf889319ae93ab4ff69dc6563e9986a5; size=9.0M
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=cda6c79f1c5cd5b7cab4cbc3e3bc77ce; size=15G
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=efeab6a097f964a6680fec354fff2dec; size=15G
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalMinusRep1; type=bigWig; md5sum=c337ddd4e1e09072747176d7698f583b; size=399M
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalPlusRep1; type=bigWig; md5sum=9f5aa2a7e09af101704bae70a6e346bf; size=404M
wgEncodeCshlLongRnaSeqHaoec70717061CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=8a602103e721c62ff3fd6ac82ab99d11; size=134M
wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2; type=bam; md5sum=4ec272444b78e7ddafca868c75c98fad; size=25G
wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2; type=bai; md5sum=20831ae47875a742a29b0f0f2d244b1e; size=8.9M
wgEncodeCshlLongRnaSeqHaoecCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6030; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalContigs; type=bedRnaElements; md5sum=d2dee2786ea0625a9342b3ed65af3d53; size=26M
wgEncodeCshlLongRnaSeqHaoecCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=8061102.1,7071706.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6947; geoSampleAccession=GSM984618; labExpId=LID47023,LID47022; bioRep=058WC,057WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=fd14aceb9950d2f7493e82d6ec96e313; size=21M
wgEncodeCshlLongRnaSeqHaoecCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6376; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=249169b333a2db8b14e336d024dac7ca; size=20M
wgEncodeCshlLongRnaSeqHaoecCellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=2adbc8d2c6557c1ff832245d0916c737; size=15G
wgEncodeCshlLongRnaSeqHaoecCellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=876f792b3de5aff293c2b9839fb3f1b5; size=15G
wgEncodeCshlLongRnaSeqHaoecCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=8061102.1,7071706.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7412; geoSampleAccession=GSM984618; labExpId=LID47023,LID47022; bioRep=058WC,057WC; labProtocolId=058WCt,057WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=1f5341da140c52a07408623e07cc27bc; size=6.1M
wgEncodeCshlLongRnaSeqHaoecCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6376; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=1502f78d629d66ad71152dce4156de49; size=1.9M
wgEncodeCshlLongRnaSeqHaoecCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6077; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalJunctions; type=bedRnaElements; md5sum=2c2e1230a24dd8872e5f152781e1222b; size=14M
wgEncodeCshlLongRnaSeqHaoecCellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalMinusRep2; type=bigWig; md5sum=b22af9bfc9d1d1b4c854ec125b3de8b6; size=338M
wgEncodeCshlLongRnaSeqHaoecCellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalPlusRep2; type=bigWig; md5sum=0eadd39b79ce4507e535612b19271564; size=344M
wgEncodeCshlLongRnaSeqHaoecCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6895; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=a689023a15023db28a7fe3711339e926; size=270K
wgEncodeCshlLongRnaSeqHaoecCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6896; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9bb124b2f404aa42aa4aafbca8dcf74f; size=292K
wgEncodeCshlLongRnaSeqHaoecCellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=b05a055223a788374a91f0e2905f0d40; size=106M
wgEncodeCshlLongRnaSeqHaoecCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=8061102.1,7071706.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7412; geoSampleAccession=GSM984618; labExpId=LID47023,LID47022; bioRep=058WC,057WC; labProtocolId=058WCt,057WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=80c5fffa8547a1e37e3073364e333a8b; size=6.6M
wgEncodeCshlLongRnaSeqHaoecCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6376; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalTranscriptGencV10; type=gtf; md5sum=3e2718c6980d67fb340980c9a09ad6b8; size=5.0M
wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1; type=bam; md5sum=36fbf385292332bd7b4ccb905ed2b45f; size=30G
wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1; type=bai; md5sum=f3da6d27baf72380d68aaeec91513496; size=9.8M
wgEncodeCshlLongRnaSeqHch00113082pCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0b4fa954aa0cf2419acd1cbd6b4c0362; size=19G
wgEncodeCshlLongRnaSeqHch00113082pCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c9731151eb5329377f29ab04e99fdd3d; size=19G
wgEncodeCshlLongRnaSeqHch00113082pCellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalMinusRep1; type=bigWig; md5sum=1d14cf8d5c47ba3e13c11cc978d47344; size=370M
wgEncodeCshlLongRnaSeqHch00113082pCellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalPlusRep1; type=bigWig; md5sum=85f89554f323ab1fc88bcf8bf2a38d37; size=377M
wgEncodeCshlLongRnaSeqHch00113082pCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ea7692246dda170c78122032cccc3f8d; size=161M
wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2; type=bam; md5sum=1c3b65dc9d9488b6bb2073f2269bd712; size=26G
wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2; type=bai; md5sum=a85ee6f36f1ad029f7928a7cdc4fea09; size=9.5M
wgEncodeCshlLongRnaSeqHch81008082CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=443e00af187743ba7bdf21003e519370; size=16G
wgEncodeCshlLongRnaSeqHch81008082CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=071cd0a130551db80d6e92d96a195dd1; size=16G
wgEncodeCshlLongRnaSeqHch81008082CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalMinusRep2; type=bigWig; md5sum=b3eb5300e4d2472a5435c16f2b094d54; size=419M
wgEncodeCshlLongRnaSeqHch81008082CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalPlusRep2; type=bigWig; md5sum=e93bf22120127d4729babf3b93cef176; size=427M
wgEncodeCshlLongRnaSeqHch81008082CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=59b247a18830ef599423616ea03d475c; size=126M
wgEncodeCshlLongRnaSeqHchCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5996; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHchCellTotalContigs; type=bedRnaElements; md5sum=6f1b44fa5f4ddcc9799558c50d765312; size=32M
wgEncodeCshlLongRnaSeqHchCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=8100808.2,0011308.2P; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6980; geoSampleAccession=GSM984611; labExpId=LID47025,LID47024; bioRep=060WC,059WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=b5b192ed34853d3f3d0eb1d1fa28b3f6; size=22M
wgEncodeCshlLongRnaSeqHchCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-26; dateUnrestricted=2012-12-26; subId=6347; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6d3a46a80ad1551c3af9539293aad5b4; size=20M
wgEncodeCshlLongRnaSeqHchCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=8100808.2,0011308.2P; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7432; geoSampleAccession=GSM984611; labExpId=LID47025,LID47024; bioRep=060WC,059WC; labProtocolId=060WCt,059WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=09852650f833cbad943611ab1a0da055; size=6.6M
wgEncodeCshlLongRnaSeqHchCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-26; dateUnrestricted=2012-12-26; subId=6347; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=03c0fef34e55a0236ede16fce7b5056c; size=1.9M
wgEncodeCshlLongRnaSeqHchCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6048; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHchCellTotalJunctions; type=bedRnaElements; md5sum=9d48eb1d7cf48a72824abf991248ff70; size=17M
wgEncodeCshlLongRnaSeqHchCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=889ecb82aadcfd9395eba7186510aef8; size=300K
wgEncodeCshlLongRnaSeqHchCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6867; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=d0a7bb9ade3909ecbdd4b9208a5c1e41; size=329K
wgEncodeCshlLongRnaSeqHchCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=8100808.2,0011308.2P; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7432; geoSampleAccession=GSM984611; labExpId=LID47025,LID47024; bioRep=060WC,059WC; labProtocolId=060WCt,059WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=5a50b404011d464625e7d6e8e2bfc891; size=7.2M
wgEncodeCshlLongRnaSeqHchCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-26; dateUnrestricted=2012-12-26; subId=6347; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHchCellTotalTranscriptGencV10; type=gtf; md5sum=9c9d6c5b03161cd3b82f1bca03c23b4b; size=5.0M
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1; type=bam; md5sum=1856b9720ee5e59f1c92549c55f3e134; size=6.1G
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1; type=bai; md5sum=08ddbb303c7dc31fa8028b2f44448ba4; size=6.6M
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2; type=bam; md5sum=31eeda4a3395cc13d75e10ecf41aeeee; size=11G
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2; type=bai; md5sum=d992f3cf35cda56b09fed8c29b7dce0c; size=7.3M
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8d51b2026f83b48a4dabcf941d51e5c4; size=4.3G
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7c4b399b7a073c520d3501ff959ab51b; size=6.9G
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a46cf53337f2c07ac5fff86f0aea32f8; size=4.5G
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2a5b4d71dbb46ce00ab958f2728fa020; size=7.0G
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=5044e4377722e5f4890cdc31068d895d; size=160M
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=b5d7cecee2e5d5a98eebfd6a0635c546; size=203M
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=3b2dcd9f6aa6ce0401ef8184a60c5aae; size=162M
wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=8528af1b3affa677a8f8d9d676a2b5a7; size=211M
wgEncodeCshlLongRnaSeqHelas3CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPamContigs; type=bedRnaElements; md5sum=4fa910c7c2c7830ad7599080cd87aa6a; size=14M
wgEncodeCshlLongRnaSeqHelas3CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7022; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=d5d2df96fdb30fcdb3d22f01aa28d7fa; size=12M
wgEncodeCshlLongRnaSeqHelas3CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4599; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=eea2814bfa951876382d20bd0c270d87; size=19M
wgEncodeCshlLongRnaSeqHelas3CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a05fdb706b885cf69525dceb4ad00a14; size=4.9M
wgEncodeCshlLongRnaSeqHelas3CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7492; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labProtocolId=011WC-,012WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=87542dfd847852a306561ff4674565fa; size=6.7M
wgEncodeCshlLongRnaSeqHelas3CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4599; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0dcdcd4aa82b92d003e87d2c3502001c; size=2.1M
wgEncodeCshlLongRnaSeqHelas3CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPamJunctions; type=bedRnaElements; md5sum=0f4833761c453707dcec2a14363c54fd; size=6.3M
wgEncodeCshlLongRnaSeqHelas3CellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=13874e328fa2232224ca25b402fc9966; size=446K
wgEncodeCshlLongRnaSeqHelas3CellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=570cdadb89451576591d4fd2f67836c8; size=449K
wgEncodeCshlLongRnaSeqHelas3CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4229; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=7e9ef789be6d28a01013ba0d7103c4af; size=109M
wgEncodeCshlLongRnaSeqHelas3CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4256; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5ad2cd65ac671a8957a6396950ab4f44; size=118M
wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fd03032cd74b3a9b440f84a17dfbe741; size=22M
wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7492; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labProtocolId=011WC-,012WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d5e6510da6ddd143037b8eef02f9a5ef; size=7.3M
wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4599; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptGencV7; type=gtf; md5sum=428e7f8ff2edbba7c3de47e8da2e8b77; size=4.9M
wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1; type=bam; md5sum=a20005281551a16e20382ca7316cc009; size=12G
wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1; type=bai; md5sum=bb8048fef0b1666ae3e4f874bb73c825; size=6.1M
wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2; type=bam; md5sum=1a2705518ff2cbe67e73d747d3128093; size=14G
wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2; type=bai; md5sum=257ede3fdaab9f7c44695eac9e71dd8c; size=7.2M
wgEncodeCshlLongRnaSeqHelas3CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapContigs; type=bedRnaElements; md5sum=62dc3de75d8b4cab7ad9c17dafe80b7f; size=13M
wgEncodeCshlLongRnaSeqHelas3CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7008; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=539a452f6072c58b71d465aa0c6dbce0; size=6.8M
wgEncodeCshlLongRnaSeqHelas3CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4583; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=107643cca70f120132dd974bab3752fe; size=19M
wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=24f8090a9e28d9722098bfb61d54705d; size=8.2G
wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fbb0b9dc6320fec162ac69872ad9c953; size=8.2G
wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=427418b750bde4095ba951cd6ed3b1a0; size=8.3G
wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fbb1ecaa10cf5ce98a476ae2d7fe3972; size=8.4G
wgEncodeCshlLongRnaSeqHelas3CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fe9ea984682d7efd271bb91b95aec20f; size=1.6M
wgEncodeCshlLongRnaSeqHelas3CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7476; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labProtocolId=011WC+,012WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c6e4603e50e9396ab777f3e10cb661b6; size=1.7M
wgEncodeCshlLongRnaSeqHelas3CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4583; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b6a25c6c8e577edf94e8a28f41f0f3a; size=2.0M
wgEncodeCshlLongRnaSeqHelas3CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapJunctions; type=bedRnaElements; md5sum=35f85c735228e0213dec2e4d6e4a26c8; size=9.5M
wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep1; type=bigWig; md5sum=4c8133208746d95a84534516be4fb92f; size=638M
wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep2; type=bigWig; md5sum=5cbe232463bd9917bfa89548688beef6; size=609M
wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep1; type=bigWig; md5sum=6b44a360b1e6b4f6f99cc00ae766c98d; size=667M
wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep2; type=bigWig; md5sum=447bdb59952394559f8e6a63e3cf5cd6; size=631M
wgEncodeCshlLongRnaSeqHelas3CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d128dc23d273cc9fc208290ad076b3aa; size=965K
wgEncodeCshlLongRnaSeqHelas3CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=405e40af44b1672d51499d92a9567ca7; size=955K
wgEncodeCshlLongRnaSeqHelas3CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4193; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=92e807186eefc7c62c4ba06eaaf8a341; size=295M
wgEncodeCshlLongRnaSeqHelas3CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4271; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5ad790d4332b1a006777dc5481a3d696; size=334M
wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=799b06bc4e977d51e4f32e39a3f64041; size=14M
wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7476; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labProtocolId=011WC+,012WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=64bc17371e0e27f287778cb249772169; size=2.1M
wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4583; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptGencV7; type=gtf; md5sum=bfc652a537cfb67a2720bab6006476c0; size=4.9M
wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2; type=bam; md5sum=7065046372bed2d578375ea05491eeee; size=6.1G
wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2; type=bai; md5sum=30cb70b6553c7566d6ca68312cbd78c9; size=4.6M
wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c9876de6130f545c3c972a7bdd42b685; size=3.7G
wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=80ff31515d5c97d88a8d0c048697de64; size=3.8G
wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=994f692cfdc2f868f2a9b0d2a7e8adc9; size=40M
wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a47f6dba257a0e77c6c0dec9dc4e619a; size=40M
wgEncodeCshlLongRnaSeqHelas3CytosolPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamContigs; type=bedRnaElements; md5sum=86b4ee2f5323ff857ddd2a799b2f5291; size=8.1M
wgEncodeCshlLongRnaSeqHelas3CytosolPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamContigsV2; type=bedRnaElements; md5sum=ddff3265691dc3fc950931b2b6ff5efd; size=8.1M
wgEncodeCshlLongRnaSeqHelas3CytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4577; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=208753e65f5db04e59ba5f33d6206968; size=16M
wgEncodeCshlLongRnaSeqHelas3CytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a4ebc691e01b20043e9aa0564a9e0d9a; size=430K
wgEncodeCshlLongRnaSeqHelas3CytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4577; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7da86012a646c5fe126e8b49fc1955f4; size=1.8M
wgEncodeCshlLongRnaSeqHelas3CytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamJunctions; type=bedRnaElements; md5sum=6a70d7f136b54fecd0a181bc1e13d004; size=2.3M
wgEncodeCshlLongRnaSeqHelas3CytosolPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1eadb02502cfcc166a19472be95eab7f; size=504K
wgEncodeCshlLongRnaSeqHelas3CytosolPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4222; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a653573f697eadcbfdd54d96edfadfb5; size=73M
wgEncodeCshlLongRnaSeqHelas3CytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a85c5c335f12025b0f2c6d3426eeff99; size=4.1M
wgEncodeCshlLongRnaSeqHelas3CytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4577; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamTranscriptGencV7; type=gtf; md5sum=3c5ec3a72ca4d688e02499761fbaed55; size=4.1M
wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1; type=bam; md5sum=fc751da26061a6af4e702add69c06063; size=13G
wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1; type=bai; md5sum=f35d3b2587393165866444a8b398dc66; size=6.5M
wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2; type=bam; md5sum=812d9cfe01e95848de5addb95ced8693; size=11G
wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2; type=bai; md5sum=a9f905c5e1544a80c4d4e30ba4872f7f; size=6.1M
wgEncodeCshlLongRnaSeqHelas3CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapContigs; type=bedRnaElements; md5sum=5cb1bc3458ff89dc1293ff076de42f3b; size=9.8M
wgEncodeCshlLongRnaSeqHelas3CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6933; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3b080972f3608d75cc06a5b187bfec84; size=5.7M
wgEncodeCshlLongRnaSeqHelas3CytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4544; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=838068301fe6bbd34cadb9419825d429; size=19M
wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6d6818ad225c1c9a7c6428fd2b954f5a; size=8.1G
wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=edef2f6d14eff28b504f880b327bdc56; size=6.8G
wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=14fbcdf4ed9b10922d18706e78df6c3e; size=8.1G
wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ce05a57c8ce512f3891407d05ce9506a; size=6.9G
wgEncodeCshlLongRnaSeqHelas3CytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8ac19bfa98dabee3abfdc28219ea9d6c; size=940K
wgEncodeCshlLongRnaSeqHelas3CytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7438; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labProtocolId=011C+,012C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=73622a7c5ce26c200200de1666ae0bd8; size=847K
wgEncodeCshlLongRnaSeqHelas3CytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4544; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7e044ceffd725524ed8cb4bc46d55817; size=2.0M
wgEncodeCshlLongRnaSeqHelas3CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapJunctions; type=bedRnaElements; md5sum=5ce2bf7098bae9ae1ebaea317ef1d489; size=8.9M
wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep1; type=bigWig; md5sum=245a245e27347eda4d51298f3d5736a0; size=338M
wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep2; type=bigWig; md5sum=ed62d554f38137c4f5c2514a969ea549; size=246M
wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep1; type=bigWig; md5sum=5f645c0f4a15472eb869054cdcf8f4ef; size=348M
wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep2; type=bigWig; md5sum=4bed223c95320b5be4bc44a2d45a8510; size=251M
wgEncodeCshlLongRnaSeqHelas3CytosolPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b2dd17e7cf84860c2e4202725a068402; size=956K
wgEncodeCshlLongRnaSeqHelas3CytosolPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=aa3bda0ceca1d50b5051d05bf52bb574; size=967K
wgEncodeCshlLongRnaSeqHelas3CytosolPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4211; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d03a1359d94ebe3238562a2edb10f339; size=85M
wgEncodeCshlLongRnaSeqHelas3CytosolPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4225; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=ec00d7f55af0f8708242e407da7a0507; size=44M
wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5d78230cd8a5c3c2e511aa5e4e501207; size=13M
wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7438; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labProtocolId=011C+,012C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=736f1477d866458d23037d6d2af6f34c; size=1.2M
wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4544; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptGencV7; type=gtf; md5sum=659226bc25503c3eb558801b3067a08d; size=4.9M
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1; type=bam; md5sum=b5b0b465507a74cf38dd3f98ea0615fa; size=9.8G
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1; type=bai; md5sum=fd8ef750822258cfd2831ad3bfbbe737; size=7.1M
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2; type=bam; md5sum=ae7bf866aabe6b680fa6f5126f7c5379; size=8.2G
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2; type=bai; md5sum=5898b3ea22daed2fbd60d8997abeeedf; size=7.0M
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=78e477be551b8394ca200034c18e2eef; size=5.9G
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cd9c31d99d204d313b88cfad7712b978; size=4.9G
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c1842737c5d6bf70388f6833f77e9c8e; size=6.2G
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7b1b32c0f7a322af1f4269d2edc11de0; size=5.2G
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=52ac5b0e92c018415f4559d0c81f96c9; size=264M
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=c86a614861e683fcf21b5fa8165e4b4d; size=238M
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=9983f6c69129879019b30794dae17b1d; size=272M
wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=36fd5aac5ec6fcbab48c4033ae60916f; size=247M
wgEncodeCshlLongRnaSeqHelas3NucleusPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPamContigs; type=bedRnaElements; md5sum=29ef33f57ff665c38051fffd9ff80d7d; size=15M
wgEncodeCshlLongRnaSeqHelas3NucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6958; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9ea8cf865e0a4af1c0b978339df13e6f; size=12M
wgEncodeCshlLongRnaSeqHelas3NucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4568; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=288b42f97d9a9720322f8e1f877358e1; size=18M
wgEncodeCshlLongRnaSeqHelas3NucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=63746987c6f36f09adfb5c8de38f6636; size=6.4M
wgEncodeCshlLongRnaSeqHelas3NucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7462; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labProtocolId=011N-,012N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=dd6455bf36b0fa60fc5297a1241ef0b8; size=7.9M
wgEncodeCshlLongRnaSeqHelas3NucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4568; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9725a2c8c6513bac905fc6d80cb0b2d8; size=2.0M
wgEncodeCshlLongRnaSeqHelas3NucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPamJunctions; type=bedRnaElements; md5sum=04070b9f30799c4e4ddd5bdf923efe3d; size=5.8M
wgEncodeCshlLongRnaSeqHelas3NucleusPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=5b8777f885902cf1eec417c0cfc4d361; size=425K
wgEncodeCshlLongRnaSeqHelas3NucleusPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=184676f405a5bf49f5c404134ca20cd9; size=422K
wgEncodeCshlLongRnaSeqHelas3NucleusPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4262; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2395baee603cd0176bfbb816b0905b46; size=175M
wgEncodeCshlLongRnaSeqHelas3NucleusPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4268; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=dce885af61b9b3a9ea581e0a7d9555be; size=214M
wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6b400b3f45e0abafe9e6b154e95afea9; size=30M
wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7462; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labProtocolId=011N-,012N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=64eef1c5feac51ca193c46927ab74a55; size=8.5M
wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4568; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptGencV7; type=gtf; md5sum=c0070a8b58c74166d50981f8c36a9dbd; size=4.8M
wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1; type=bam; md5sum=813c186380c3244c4c2ce350cffe3477; size=7.5G
wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1; type=bai; md5sum=e64d58d731e3744b6af32f586fce0f51; size=6.8M
wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2; type=bam; md5sum=0458e65b9a61688a2c0765d8804bf376; size=11G
wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2; type=bai; md5sum=2b82707be85a094881b1137677970d71; size=7.6M
wgEncodeCshlLongRnaSeqHelas3NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapContigs; type=bedRnaElements; md5sum=3e9a3b425eec1cd4365f4675f7b34d59; size=15M
wgEncodeCshlLongRnaSeqHelas3NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6940; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=46f4d8b2cd5cf47e975b31d3b37c33ae; size=8.0M
wgEncodeCshlLongRnaSeqHelas3NucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4550; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5622ca8772d4d7d44aa400f124758b50; size=19M
wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=237c5c2359e59900b2cec035bfa8e58c; size=4.8G
wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c8ba6ff3560188e8963952e0b9b92299; size=6.7G
wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f217b14e04c9f8f4a828ac743f546b44; size=4.9G
wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d82ddc56631eec1ad307ff9ecfcebbbc; size=6.9G
wgEncodeCshlLongRnaSeqHelas3NucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8f25334eede0a2c5f6cb39b7f4fc852f; size=2.9M
wgEncodeCshlLongRnaSeqHelas3NucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7444; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labProtocolId=011N+,012N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3551fb08c135486d5c6e7de069b50e04; size=3.3M
wgEncodeCshlLongRnaSeqHelas3NucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4550; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f91b8d10fab30779c4741d49ad0a51a1; size=2.1M
wgEncodeCshlLongRnaSeqHelas3NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapJunctions; type=bedRnaElements; md5sum=7fc87f07402588abe204f8d3f01150cf; size=11M
wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep1; type=bigWig; md5sum=faf56e77529e066c90f63e24f354ea42; size=643M
wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep2; type=bigWig; md5sum=fd1205720c176b81f44f5ea1528acdec; size=849M
wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep1; type=bigWig; md5sum=557266b8180bd31244553c99b0465a06; size=667M
wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep2; type=bigWig; md5sum=bce19a1940459ae540e4477f3015e9ac; size=882M
wgEncodeCshlLongRnaSeqHelas3NucleusPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0d8357b86b3e22f1263b8c19f9acd1ac; size=632K
wgEncodeCshlLongRnaSeqHelas3NucleusPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=cacbf998f8d6dcbe14ccdb9489867d75; size=619K
wgEncodeCshlLongRnaSeqHelas3NucleusPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4264; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8b36285f4a86c23b8dd232e9f49bcbce; size=136M
wgEncodeCshlLongRnaSeqHelas3NucleusPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4272; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6e890269f6ed283edaa2627ab6e7a985; size=134M
wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1f8cb9a1410c079ae671b13e58dad88c; size=21M
wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7444; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labProtocolId=011N+,012N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7c976b0b5fef6e9fbef25f912f6831e6; size=3.8M
wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4550; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptGencV7; type=gtf; md5sum=6b3fadce4b87a43c7eb4572dba74ef84; size=5.0M
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1; type=bam; md5sum=e36535aa0cc2fda1c3e7f4964030549c; size=8.5G
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1; type=bai; md5sum=a30db38a49b3775d94924fe115ba841f; size=6.9M
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2; type=bam; md5sum=345146c1ee46e085878700238278e732; size=9.6G
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2; type=bai; md5sum=785c4b5aae4928f1b01919daec0f5de3; size=7.2M
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6543fd8068429b1390518f17c3ddccfa; size=6.5G
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0d63040bde652cbc0aa4acb8e844dffd; size=6.7G
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5ac7daccae2134a5c780ae7b35bda5d7; size=6.5G
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c4ba1cd77ede57d6e271c136836932e8; size=6.6G
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=42764d449a5308de0a679cbe4f4164d5; size=633M
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=740eb1c8986ecc2aac1582e7d4772c41; size=205M
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=387f757fc4749c868f0777f8672a6aab; size=647M
wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=e78ec2de531a3149d81cf24cac6350ac; size=213M
wgEncodeCshlLongRnaSeqHepg2CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPamContigs; type=bedRnaElements; md5sum=9b76eb9ca54bc29584565123b5e1be8c; size=14M
wgEncodeCshlLongRnaSeqHepg2CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7006; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f0067f208c194486ab9cbc6991f4f693; size=13M
wgEncodeCshlLongRnaSeqHepg2CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4580; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=403d13983ceeac1d8bcc76d93e8f04f6; size=19M
wgEncodeCshlLongRnaSeqHepg2CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d49d4370a27a11ec414c528242ddab24; size=5.0M
wgEncodeCshlLongRnaSeqHepg2CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7471; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labProtocolId=013WC-,014WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b109268067f2cd72feff679d371441f3; size=7.5M
wgEncodeCshlLongRnaSeqHepg2CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4580; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d543c61de8d7a79d1215ff397fcc8d9d; size=2.1M
wgEncodeCshlLongRnaSeqHepg2CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPamJunctions; type=bedRnaElements; md5sum=8db612081514779be01378e37c1deb0b; size=6.1M
wgEncodeCshlLongRnaSeqHepg2CellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f0bde7ebc7314b429c60b701faa42ea2; size=444K
wgEncodeCshlLongRnaSeqHepg2CellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8bb54454a42c80ba046c266211b65df3; size=443K
wgEncodeCshlLongRnaSeqHepg2CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4242; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=769bd5719acfd5bf5a25f6010ab6df6a; size=92M
wgEncodeCshlLongRnaSeqHepg2CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4243; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8349742b8d696170316d2648567d7dcb; size=113M
wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b1ff9047ab3173bdb93759332d2ea7d3; size=24M
wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7471; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labProtocolId=013WC-,014WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=12e3fd6336c4763fce20bb9b036ab3a7; size=8.1M
wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4580; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptGencV7; type=gtf; md5sum=32d56e71f5c4c1d9ddf67273313eb416; size=4.8M
wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1; type=bam; md5sum=02767a22e4364632f70602c093b00c19; size=13G
wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1; type=bai; md5sum=6e35170cd88fd5d68d6528a4da16d2f3; size=6.8M
wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2; type=bam; md5sum=e7531cb62fdf924279ff59fe98c6b7ca; size=13G
wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2; type=bai; md5sum=aba8b3593d3bdef25b9c92a56b933646; size=6.9M
wgEncodeCshlLongRnaSeqHepg2CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapContigs; type=bedRnaElements; md5sum=474b68a51b54a9aa9c0cc779aea1d31c; size=13M
wgEncodeCshlLongRnaSeqHepg2CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6976; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=cc5a1dfbf0a816cc8b77beeb44e76e71; size=6.6M
wgEncodeCshlLongRnaSeqHepg2CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4596; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=59875772bdde545b88515507e7c28473; size=19M
wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b17834c613b2d61fa49af8f76803e67c; size=8.4G
wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b9e475c2cc8ebcd349699f854b13ef09; size=8.1G
wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9d26323e10e6e7efc5867fc0a9e097df; size=8.5G
wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=afd552819c8302a3dcc25f6250aa9401; size=8.3G
wgEncodeCshlLongRnaSeqHepg2CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e51fbc933370019393ff0e609a57c443; size=1.4M
wgEncodeCshlLongRnaSeqHepg2CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7489; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labProtocolId=013WC+,014WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8450240c3ab87410f8b1fd2649a8a29f; size=1.5M
wgEncodeCshlLongRnaSeqHepg2CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4596; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b12d7de7b32611ec2d39efe9b9f6d66b; size=2.0M
wgEncodeCshlLongRnaSeqHepg2CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapJunctions; type=bedRnaElements; md5sum=995346018d6c6bd161e5cf3d1d19e6c8; size=8.3M
wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep1; type=bigWig; md5sum=a3570dbac8a696002bb3f26cda9778e6; size=607M
wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep2; type=bigWig; md5sum=ee08612d34dd354bdd16954f5d7afa48; size=615M
wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep1; type=bigWig; md5sum=4f3410f10402a02ecee6ae18aaa1e940; size=617M
wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep2; type=bigWig; md5sum=4dc923845a3133016d07c3dc038af96d; size=626M
wgEncodeCshlLongRnaSeqHepg2CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=47b2f1be346ccc94c970cc4737e18dba; size=969K
wgEncodeCshlLongRnaSeqHepg2CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4fb2eb51d9b74a39afb350210c6a9b2c; size=979K
wgEncodeCshlLongRnaSeqHepg2CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4296; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b0c72bbb690057d49893833847e38893; size=294M
wgEncodeCshlLongRnaSeqHepg2CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4277; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9e29e6e5e8fb0cbe79748aac1c264836; size=278M
wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b764de9b34267888b52ca8f7d7afa68c; size=13M
wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7489; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labProtocolId=013WC+,014WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3c7062e4e4ca8cc5c1221c31c1997420; size=1.9M
wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4596; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptGencV7; type=gtf; md5sum=893f3b0bba3479f34d39997e6b1af645; size=5.0M
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1; type=bam; md5sum=7453e2b992f3c894677616e3bb0844e6; size=12G
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1; type=bai; md5sum=3c5cafea0e8545a2462a13b92bd4cde2; size=4.8M
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2; type=bam; md5sum=eba85589846076ec0ccf33482142fccd; size=9.3G
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2; type=bai; md5sum=4ffdd827c8c407cef3b6eddf5f05da2c; size=4.7M
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b0dc2a32f4b6b2579cfddf5cfdd70303; size=6.6G
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=70f9b992c09d9b6f39f6bc9cac6dcf7d; size=5.5G
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f6b9c9e8edec6841e3f659a84c8fd6b4; size=6.8G
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8e25d68e0d932a32e2dc0f8abc0a1ae8; size=5.7G
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=043d823e2358cae0c0962a1057b0165f; size=41M
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=eb73ebe1ca04fcf4f1f52c91b507b4eb; size=42M
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=ef75f93a98c3fdbed457945dbbdc6b5a; size=41M
wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=6400a9d93e94a76cf5b15bf90d4ef3d7; size=42M
wgEncodeCshlLongRnaSeqHepg2CytosolPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPamContigs; type=bedRnaElements; md5sum=bbfe05a677d620c4f50fb415f3d16ca0; size=5.0M
wgEncodeCshlLongRnaSeqHepg2CytosolPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6963; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9df56e9eb9774ac90d78c77d0a6036b4; size=5.6M
wgEncodeCshlLongRnaSeqHepg2CytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4575; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=37974e38924b73e3eeda82489b176f8e; size=18M
wgEncodeCshlLongRnaSeqHepg2CytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=78785cb260b7f4d9931bab1f9215f0f0; size=573K
wgEncodeCshlLongRnaSeqHepg2CytosolPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7470; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labProtocolId=013C-,014C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1204a1b867f67d3fe6a3947985bd9538; size=780K
wgEncodeCshlLongRnaSeqHepg2CytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4575; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3dd50eaac5119471d9bc311655d06143; size=2.0M
wgEncodeCshlLongRnaSeqHepg2CytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPamJunctions; type=bedRnaElements; md5sum=069a37e60d24a05bfb4c08f21a6e8270; size=3.0M
wgEncodeCshlLongRnaSeqHepg2CytosolPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=3b918f701c942d61e87cc52ea2c4ab96; size=499K
wgEncodeCshlLongRnaSeqHepg2CytosolPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=966dd1e971f2155364bc1ec02b76a4d8; size=493K
wgEncodeCshlLongRnaSeqHepg2CytosolPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4238; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=1e4c787bf1e62eeb5b67156720af0871; size=257M
wgEncodeCshlLongRnaSeqHepg2CytosolPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4224; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=440ee8acd1ab1421c2efdd8536b7e53e; size=218M
wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a92e9768767e58eb3e06d9b7049d5f23; size=5.3M
wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7470; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labProtocolId=013C-,014C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0311ef10ae950eb4dac093fbdcbd9b29; size=1.2M
wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4575; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptGencV7; type=gtf; md5sum=e55b2f826a31d9ab52178da76f9872a4; size=4.5M
wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1; type=bam; md5sum=75cab8575bcbd0bfdeda8ab7b7ac8488; size=12G
wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1; type=bai; md5sum=8ccfbdd1a3e06679993a4ec43cfbd724; size=6.2M
wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2; type=bam; md5sum=2dbfb045cfb2d0a181c791beb5f7ea38; size=12G
wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2; type=bai; md5sum=403e9c51257deeb064513192599a988e; size=5.9M
wgEncodeCshlLongRnaSeqHepg2CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapContigs; type=bedRnaElements; md5sum=e4427d443af5ea5b31c865e6f40783e2; size=7.6M
wgEncodeCshlLongRnaSeqHepg2CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6983; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3ce4ccbb7aca7091c18f3a3732798ea9; size=5.8M
wgEncodeCshlLongRnaSeqHepg2CytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4603; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=50b81b264bcb287ebf491a29a4a30334; size=19M
wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9ac2aafa0070b2739d7c902b8ff6b8a6; size=7.3G
wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=66596b0d81963214b840701a8da3f064; size=7.3G
wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=aed7be97f8fabc23a940be2758307eb6; size=7.5G
wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=48f96d020555bad6816be7cfb1760a39; size=7.4G
wgEncodeCshlLongRnaSeqHepg2CytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=87c1a17ef8a1d61d54c10d70e0461cf3; size=878K
wgEncodeCshlLongRnaSeqHepg2CytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7496; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labProtocolId=013C+,014C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3c11669b4d8f0472701aae40793f4a5a; size=826K
wgEncodeCshlLongRnaSeqHepg2CytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4603; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5a293cd10effe631e05ad26aff4a41f7; size=2.0M
wgEncodeCshlLongRnaSeqHepg2CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapJunctions; type=bedRnaElements; md5sum=a8324e9af4d1d139e24bc7424866b483; size=8.1M
wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep1; type=bigWig; md5sum=ffe9a17b7d8aca6252e188f12e572a96; size=272M
wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep2; type=bigWig; md5sum=17682c32b25f99a6a780eb4501f1ba9a; size=270M
wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep1; type=bigWig; md5sum=3a5a1048f3b4570f66973f005b2f099d; size=275M
wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep2; type=bigWig; md5sum=d8c4009c64ec275e061d5bc677d68ba8; size=274M
wgEncodeCshlLongRnaSeqHepg2CytosolPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=93df0dbb56c5be0bfaf0697f3b2e22e6; size=965K
wgEncodeCshlLongRnaSeqHepg2CytosolPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fd25f0434cc0f2abbb4c52a22ca893de; size=909K
wgEncodeCshlLongRnaSeqHepg2CytosolPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4207; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=605de1da68fd725c4c11eabe3debb8d2; size=53M
wgEncodeCshlLongRnaSeqHepg2CytosolPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4263; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=25e71fba212e7d4ffae30a709d6ddf99; size=50M
wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c8bc0807e5c1c2f521bb3bf3fe6b9697; size=11M
wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7496; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labProtocolId=013C+,014C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0a0c255c92a315d9d0452f654ac20d6a; size=1.2M
wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4603; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptGencV7; type=gtf; md5sum=ca3fb1f5868d98d02724b76804c088e1; size=4.9M
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1; type=bam; md5sum=6eeaba4c0dc3209e93db12ed5c67a448; size=13G
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1; type=bai; md5sum=cfa24fd2e83567a3fd83f4fc3358ddda; size=7.4M
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2; type=bam; md5sum=608e2548db24a551f29ad873b1e20206; size=14G
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2; type=bai; md5sum=547f1bb7fe89b5d4eff8a37326766b70; size=7.7M
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=279128df63a6efdb3d416da13ef0b4b6; size=7.1G
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e9f0dd362f7dcc7bac47a140dc76a4d0; size=7.8G
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0675a78a84e99d882f5ad823a36a92e2; size=7.4G
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4901abdb23f4205306d14e009396a9f0; size=8.1G
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=65c1f1b45258084eec333072fa90f7ac; size=366M
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=877a005e1aade3ce7b4567a6954830bb; size=400M
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=23aba0762894353d50a4984232357d15; size=369M
wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=7711c9e19adbe5dd75a2776eeb2c0f7c; size=403M
wgEncodeCshlLongRnaSeqHepg2NucleusPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPamContigs; type=bedRnaElements; md5sum=4423e86c73bf40af4657d016d10968e0; size=12M
wgEncodeCshlLongRnaSeqHepg2NucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6952; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=2dae1dac2584a96cdcd7fbf2ae0e5c53; size=12M
wgEncodeCshlLongRnaSeqHepg2NucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4562; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9de07c1d6fc329ac5ebfa5d20635c300; size=18M
wgEncodeCshlLongRnaSeqHepg2NucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b796f69f7cc40bb70cbd0217b7c9fde; size=4.2M
wgEncodeCshlLongRnaSeqHepg2NucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7457; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labProtocolId=013N-,014N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=975224823eec41a2ea01115b2679ef30; size=8.1M
wgEncodeCshlLongRnaSeqHepg2NucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4562; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=df0ce405a602d9436b625a157ef1125f; size=2.0M
wgEncodeCshlLongRnaSeqHepg2NucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPamJunctions; type=bedRnaElements; md5sum=3cd490bbe1ed9a0c14d56b6a901619b3; size=6.5M
wgEncodeCshlLongRnaSeqHepg2NucleusPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e7e9fb61d5b7bf2b98ba738d5bed233c; size=422K
wgEncodeCshlLongRnaSeqHepg2NucleusPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e8721e85a0d051b7c7750ee649d837c6; size=424K
wgEncodeCshlLongRnaSeqHepg2NucleusPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4217; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=10205eed0ee8b5790e96b88bd4734ac4; size=226M
wgEncodeCshlLongRnaSeqHepg2NucleusPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4244; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=1128cd5f38b06f022b2a1a7f8394248e; size=367M
wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2eafd6458b32b35c4ca16d96dcda1993; size=20M
wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7457; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labProtocolId=013N-,014N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b91971d9f3db58339beebea60d177d80; size=8.7M
wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4562; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptGencV7; type=gtf; md5sum=1977ce92dd35677147c30d7920ece2de; size=4.8M
wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1; type=bam; md5sum=8f2301473a5ab2167df14f49001bf426; size=11G
wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1; type=bai; md5sum=77a4651bac4f805b014e7f8fa7d3aff5; size=7.6M
wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2; type=bam; md5sum=d536759e33b5fcc0aa401eef92ddffa0; size=9.1G
wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2; type=bai; md5sum=c99c1e50f9b11f8a96726cf3c8e63019; size=7.3M
wgEncodeCshlLongRnaSeqHepg2NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapContigs; type=bedRnaElements; md5sum=84fe105b4847555a1ceb46224359ba02; size=17M
wgEncodeCshlLongRnaSeqHepg2NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6967; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8a0eee9c48fd4cb8e75ea5b2bc7e6d6b; size=7.8M
wgEncodeCshlLongRnaSeqHepg2NucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4584; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5882e01a7a07139597a34871258feb50; size=19M
wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6344d68a7016073ba03fdac2333876b9; size=6.7G
wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a938650c48b17bde28ef48a7a69ca966; size=5.6G
wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c39c9d20d7f1f1a74b058f19a7e58fec; size=6.8G
wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b20517f2cd1d9b3d195885b6b3bb420c; size=5.8G
wgEncodeCshlLongRnaSeqHepg2NucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=54a3a7a8b9a3cd9eddaa0098ce870e9c; size=3.0M
wgEncodeCshlLongRnaSeqHepg2NucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7477; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labProtocolId=013N+,014N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bcdc8d66514785998b663d602e78da7d; size=3.1M
wgEncodeCshlLongRnaSeqHepg2NucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4584; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=317833359c8cf4f7587da4a959e426be; size=2.0M
wgEncodeCshlLongRnaSeqHepg2NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapJunctions; type=bedRnaElements; md5sum=e437d292a49255a07e39a4d91710e3ad; size=11M
wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep1; type=bigWig; md5sum=9dbe57caae7c742e8c372975b1fe2b4f; size=938M
wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep2; type=bigWig; md5sum=ea70564b90be7b50ec3afb6c089d2d24; size=828M
wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep1; type=bigWig; md5sum=e314f4755b4dc7e45ebe196e4c732a24; size=956M
wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep2; type=bigWig; md5sum=d4bef61200d06bd10331bc60877aca01; size=843M
wgEncodeCshlLongRnaSeqHepg2NucleusPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=eb7a5961e3e2cb2e44c51df91c016997; size=696K
wgEncodeCshlLongRnaSeqHepg2NucleusPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=eaf767aff2e22e313dbd88ba1d5bdcd1; size=656K
wgEncodeCshlLongRnaSeqHepg2NucleusPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4283; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=43fbc1d2f4903d5cf94f52f711d7c6ce; size=81M
wgEncodeCshlLongRnaSeqHepg2NucleusPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4221; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=57169b1148950f8399012695ed61c71a; size=58M
wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7e0fb5c4bdbdf2332e3fc92796e29d2e; size=22M
wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7477; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labProtocolId=013N+,014N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ca7dd7e3616e0ef8a69fa0234a3d9c26; size=3.5M
wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4584; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptGencV7; type=gtf; md5sum=5118dcd4e7c0dcca6f33b6e4f4a39ae3; size=5.0M
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2; type=bam; md5sum=386f0dcf410f4263891384a185718c0d; size=21G
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2; type=bai; md5sum=f4b9916d1a6446d537bcde0d1691d489; size=8.7M
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=ed6cc74e10a736016c9821da2ff1d4c9; size=13G
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d4c3014899697e8e663529d45989e4d3; size=13G
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalMinusRep2; type=bigWig; md5sum=ae09eca1e309413b82993364d87e2985; size=314M
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalPlusRep2; type=bigWig; md5sum=ac639bc61b0b162ee7f55cdc501f38c0; size=326M
wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=53e7dc5ac39e77985b3153f681a4d770; size=265M
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1; type=bam; md5sum=fc0cf748484f7efb1778c1bbb3a52c6b; size=14G
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1; type=bai; md5sum=abb58cab96ea330ae21cc065ba219b57; size=7.7M
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4fbbc422c237f6c874d55a6a271ed961; size=9.2G
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=3d69c2705efdc9b0f0f974ad9217eb82; size=8.8G
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalMinusRep1; type=bigWig; md5sum=84c638b826c8bcc476c57002814d6394; size=206M
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalPlusRep1; type=bigWig; md5sum=0aed39214cd311abaf81f24e1da8eded; size=212M
wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=c0fb636d4f342592183a9569f0bbecb4; size=223M
wgEncodeCshlLongRnaSeqHfdpcCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6016; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpcCellTotalContigs; type=bedRnaElements; md5sum=317627e40fcde1236482b417517b4ec6; size=29M
wgEncodeCshlLongRnaSeqHfdpcCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6985; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=74801d1e34f1f1162831cf3c37ff2733; size=17M
wgEncodeCshlLongRnaSeqHfdpcCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6362; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=00aa9c4642a39f54a0191fd8c4e362f0; size=20M
wgEncodeCshlLongRnaSeqHfdpcCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7402; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=36b1f9952ee08c632a18ea2ae863983b; size=4.6M
wgEncodeCshlLongRnaSeqHfdpcCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6362; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=df19100d44ef45c3351327a35896d25a; size=1.9M
wgEncodeCshlLongRnaSeqHfdpcCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6049; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpcCellTotalJunctions; type=bedRnaElements; md5sum=64a50c8be42e4953399f739fa06214cc; size=11M
wgEncodeCshlLongRnaSeqHfdpcCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6890; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=0c944e6e445e5f9a5333196ac37632ef; size=247K
wgEncodeCshlLongRnaSeqHfdpcCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6904; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=12f320e3ddeb4907fc55ebdbfb633107; size=254K
wgEncodeCshlLongRnaSeqHfdpcCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7402; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fd9aea94ef03641dc011557aa867de83; size=5.1M
wgEncodeCshlLongRnaSeqHfdpcCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6362; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpcCellTotalTranscriptGencV10; type=gtf; md5sum=4038e786a1e774082a684ad7bc8ee59e; size=5.0M
wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1; type=bam; md5sum=a525be222112674b21ada5ef31bc9882; size=5.2G
wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1; type=bai; md5sum=8a751defea218c2fb9d9c57ab7874044; size=4.8M
wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0276b810f07e79916c455ce2bb5ec157; size=6.4G
wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=32477d555cef1ede480634eba07e468a; size=6.6G
wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=e65eb9c05e42082bc0a19b1107320ad7; size=79M
wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=be4b8d2e892ad7b3539b5a1b70d8c6cb; size=80M
wgEncodeCshlLongRnaSeqHmecCellPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamContigs; type=bedRnaElements; md5sum=ee82beac3fd7bd49e7cb5ef4c1479f80; size=6.2M
wgEncodeCshlLongRnaSeqHmecCellPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamContigsV2; type=bedRnaElements; md5sum=f7ea8ee1acc4a584f6913fde18a2e6f9; size=6.2M
wgEncodeCshlLongRnaSeqHmecCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6938; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=983f2f1f1373b396b63d1241d6754ab2; size=1013K
wgEncodeCshlLongRnaSeqHmecCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4547; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4cb478b92f1cf46c2cf8031d98d5ace2; size=15M
wgEncodeCshlLongRnaSeqHmecCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=97000d9831c170051e012936dcde348a; size=165K
wgEncodeCshlLongRnaSeqHmecCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7442; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labProtocolId=036WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8daf2fe3dd0b14cb0cce3a0d3fc0a2b2; size=208K
wgEncodeCshlLongRnaSeqHmecCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4547; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=077d5ba155ea02a6996100b1293da32c; size=1.8M
wgEncodeCshlLongRnaSeqHmecCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamJunctions; type=bedRnaElements; md5sum=72bd2e0441a098290bc37d108dbc0a6e; size=1.7M
wgEncodeCshlLongRnaSeqHmecCellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=94696e0ae6c9f481b7f35342d645bb29; size=427K
wgEncodeCshlLongRnaSeqHmecCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4196; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3d21c12d498f9fca5332c3bdf47aa8ad; size=1.1G
wgEncodeCshlLongRnaSeqHmecCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3175f40745ceb0fc558c226bdf0b38de; size=907K
wgEncodeCshlLongRnaSeqHmecCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7442; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labProtocolId=036WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2b4fc43ed33bd77b564e261dd93a7e60; size=265K
wgEncodeCshlLongRnaSeqHmecCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4547; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamTranscriptGencV7; type=gtf; md5sum=cc53721e067d06cd6069d7bd3a56136b; size=3.9M
wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1; type=bam; md5sum=8d555da2088148d30086f729624ebdd2; size=14G
wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1; type=bai; md5sum=dfef12696ff0ef95cc6ebf1de6242e29; size=6.7M
wgEncodeCshlLongRnaSeqHmecCellPapContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapContigs; type=bedRnaElements; md5sum=d4cc69f4acfab349520373b4a2ab813a; size=11M
wgEncodeCshlLongRnaSeqHmecCellPapContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapContigsV2; type=bedRnaElements; md5sum=4bff741d303a8ccab4f65f93ed345b0e; size=11M
wgEncodeCshlLongRnaSeqHmecCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6945; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3b19fc58fc97cbc30393e74cb8a3f0d3; size=4.9M
wgEncodeCshlLongRnaSeqHmecCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4556; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0d8594de330c26be062a3af35f3e105b; size=17M
wgEncodeCshlLongRnaSeqHmecCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1a7ad07a3c28aeb113867cf603ba7aec; size=8.3G
wgEncodeCshlLongRnaSeqHmecCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=be588e912f3e37e5ef9189a585c66c61; size=8.6G
wgEncodeCshlLongRnaSeqHmecCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=11e01859abe6b4632b3cf241c7527790; size=620K
wgEncodeCshlLongRnaSeqHmecCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7449; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labProtocolId=036WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=a62338a0f331556835e6cf664d55f2b5; size=583K
wgEncodeCshlLongRnaSeqHmecCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4556; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c99b771a5d37ca44eae57168d6cafadb; size=1.9M
wgEncodeCshlLongRnaSeqHmecCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapJunctions; type=bedRnaElements; md5sum=2e61eb84be4e1a7c6f20f9d615cecf74; size=5.8M
wgEncodeCshlLongRnaSeqHmecCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapMinusRawSigRep1; type=bigWig; md5sum=68b04effdef1dcbf02471aaa3311e62a; size=374M
wgEncodeCshlLongRnaSeqHmecCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapPlusRawSigRep1; type=bigWig; md5sum=8d5af746966efac6f1f646d0d750dd1b; size=386M
wgEncodeCshlLongRnaSeqHmecCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=eb94362f1eb864be9182333b42f9a5cb; size=585K
wgEncodeCshlLongRnaSeqHmecCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4200; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6581c0645f5c4a7df2490e213ca3ead3; size=114M
wgEncodeCshlLongRnaSeqHmecCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=823561655be3f7fe84989003179023b6; size=8.3M
wgEncodeCshlLongRnaSeqHmecCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7449; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labProtocolId=036WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5e47119ae98669e80e71a468a8e6e3f9; size=924K
wgEncodeCshlLongRnaSeqHmecCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4556; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapTranscriptGencV7; type=gtf; md5sum=2711f0ee759331143a379ca7aa9cbdc3; size=4.4M
wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1; type=bam; md5sum=38105b73450548362bc46e3add0d025d; size=19G
wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1; type=bai; md5sum=5c7de6e2ad5f35d061ed412fec83b0b3; size=8.4M
wgEncodeCshlLongRnaSeqHmepcCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6046; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalContigs; type=bedRnaElements; md5sum=12036c172e9e1b9dcf96424fbe616fe8; size=53M
wgEncodeCshlLongRnaSeqHmepcCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7025; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=2a16db8db4fcba6bc56d54abfaac5cea; size=13M
wgEncodeCshlLongRnaSeqHmepcCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6393; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=f81e68e86e9c0683b5c9f596c879df61; size=18M
wgEncodeCshlLongRnaSeqHmepcCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=30671aa21b65d8e72059113fe135ef62; size=12G
wgEncodeCshlLongRnaSeqHmepcCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=1594f8c658f5cc39b6547bdc670c2353; size=11G
wgEncodeCshlLongRnaSeqHmepcCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7434; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=f1338de661f024fba95db6b33b1a3e78; size=3.4M
wgEncodeCshlLongRnaSeqHmepcCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6393; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=850f11ba155cec3a57c0ef2c58d835f3; size=1.6M
wgEncodeCshlLongRnaSeqHmepcCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6400; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalJunctions; type=bedRnaElements; md5sum=2834261159c6f41486497930faddf831; size=6.6M
wgEncodeCshlLongRnaSeqHmepcCellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalMinusRep1; type=bigWig; md5sum=4c4f9a50c339ddd7246584dfbb4ab5c3; size=260M
wgEncodeCshlLongRnaSeqHmepcCellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalPlusRep1; type=bigWig; md5sum=2c193a2af20cd63864f1f888478395a0; size=267M
wgEncodeCshlLongRnaSeqHmepcCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6909; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=5645a295ec59c58e0862d5cbc3b00f00; size=256K
wgEncodeCshlLongRnaSeqHmepcCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ccd4feb21196cafec969f4e041996072; size=229M
wgEncodeCshlLongRnaSeqHmepcCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7434; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=0a02cbc8cc4ec1d9da6e14b364e6df9b; size=4.1M
wgEncodeCshlLongRnaSeqHmepcCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6393; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalTranscriptGencV10; type=gtf; md5sum=93edf5cb0585c0022c99c8c974976837; size=4.4M
wgEncodeCshlLongRnaSeqHmnccbCellTotalAlnRep2.bam	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6786; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmnccbCellTotalAlnRep2; type=bam; md5sum=2b685272da0c4bea68b0f241e14d622e; size=33G
wgEncodeCshlLongRnaSeqHmnccbCellTotalAlnRep2.bam.bai	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6786; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmnccbCellTotalAlnRep2; type=bai; md5sum=bd8173ba702ac9d2f117cf88d6e06983; size=15M
wgEncodeCshlLongRnaSeqHmnccbCellTotalContigs.bedRnaElements.gz	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6782; labExpId=LID47806; bioRep=076WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmnccbCellTotalContigs; type=bedRnaElements; md5sum=0b864dee46f128a1395ff3ba2b4ad0bd; size=140M
wgEncodeCshlLongRnaSeqHmnccbCellTotalFastqRd1Rep2.fastq.gz	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6786; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=cdfa7553246eaae61f377724467ea9f6; size=20G
wgEncodeCshlLongRnaSeqHmnccbCellTotalFastqRd2Rep2.fastq.gz	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6786; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4bf61d3b0e8bc70276d9d0cfb36b2ec2; size=20G
wgEncodeCshlLongRnaSeqHmnccbCellTotalJunctions.bedRnaElements.gz	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6784; labExpId=LID47806; bioRep=076WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmnccbCellTotalJunctions; type=bedRnaElements; md5sum=dc573687a01be67bdf4efcba21463a16; size=28M
wgEncodeCshlLongRnaSeqHmnccbCellTotalMinusRep2.bigWig	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-04-25; dateUnrestricted=2013-01-25; subId=6859; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmnccbCellTotalMinusRep2; type=bigWig; md5sum=25900ef8f5bd43d545a76d03e15a6ac8; size=394M
wgEncodeCshlLongRnaSeqHmnccbCellTotalPlusRep2.bigWig	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-04-25; dateUnrestricted=2013-01-25; subId=6859; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmnccbCellTotalPlusRep2; type=bigWig; md5sum=a39147e1499318a8a76f2323126fa4b4; size=401M
wgEncodeCshlLongRnaSeqHmnccbCellTotalProtocolRep2.pdf.gz	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6891; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=e18387851efe91612a8bb548f8621c47; size=268K
wgEncodeCshlLongRnaSeqHmnccbCellTotalSpikeinsRep2.spikeins	objStatus=revoked - DNA present in sample; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMNC-CB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9111701.6; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002877; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6786; labExpId=LID47806; bioRep=076WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=f51586b30956d388e36d319e2dd9bc00; size=90M
wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1.bam	objStatus=replaced - too shallow; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6785; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1; type=bam; md5sum=1784c796180b9a3fc1b1cf4dbcec0388; size=4.2G
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wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2; type=bam; md5sum=92bd5939344efe6e40534844ff375945; size=30G
wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2; type=bai; md5sum=eda5e2fe1e0189462f29df51cfd1ab1e; size=11M
wgEncodeCshlLongRnaSeqHmncpbCellTotalContigs.bedRnaElements.gz	objStatus=replaced - too shallow; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0082430.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6781; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalContigs; type=bedRnaElements; md5sum=e7221b519eeaf26f13d4389436cc8a3d; size=5.6M
wgEncodeCshlLongRnaSeqHmncpbCellTotalContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0082430.9; submittedDataVersion=V2 - First experiment found to be too shallow; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-07-04; dateUnrestricted=2013-04-04; subId=7320; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalContigsV2; type=bedRnaElements; md5sum=7a17817439ccacd799c51308f636891c; size=17M
wgEncodeCshlLongRnaSeqHmncpbCellTotalFastqRd1Rep1.fastq.gz	objStatus=replaced - too shallow; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6785; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=f38a3f3378f6ddfb273153d85849adce; size=2.3G
wgEncodeCshlLongRnaSeqHmncpbCellTotalFastqRd1Rep1V2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=89fe1c8711794b1e7d562cd820f91719; size=18G
wgEncodeCshlLongRnaSeqHmncpbCellTotalFastqRd2Rep1.fastq.gz	objStatus=replaced - too shallow; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6785; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=819d7aa5210a0324235a030977811bea; size=2.3G
wgEncodeCshlLongRnaSeqHmncpbCellTotalFastqRd2Rep1V2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=8b5d32ff78052e035f7cac0e603baccf; size=18G
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wgEncodeCshlLongRnaSeqHmncpbCellTotalJunctionsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0082430.9; submittedDataVersion=V2 - First experiment found to be too shallow; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-07-04; dateUnrestricted=2013-04-04; subId=7320; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalJunctionsV2; type=bedRnaElements; md5sum=7fee8aa6668f03047347c19fc07d8b7f; size=11M
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wgEncodeCshlLongRnaSeqHmncpbCellTotalMinusSignalRep1V2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalMinusSignalRep1V2; type=bigWig; md5sum=71fff235f6e830176420f922546acf92; size=375M
wgEncodeCshlLongRnaSeqHmncpbCellTotalPlusRep1.bigWig	objStatus=replaced - too shallow; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-04-25; dateUnrestricted=2013-01-25; subId=6858; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalPlusRep1; type=bigWig; md5sum=2b574e2a42ad48edb382bd0f16b31ab8; size=111M
wgEncodeCshlLongRnaSeqHmncpbCellTotalPlusSignalRep1V2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalPlusSignalRep1V2; type=bigWig; md5sum=92ee6be7d6233123985fb490c3370d65; size=384M
wgEncodeCshlLongRnaSeqHmncpbCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6865; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=cf2be06e53f4b8e1304a11f575c810de; size=262K
wgEncodeCshlLongRnaSeqHmncpbCellTotalSpikeinsRep1.spikeins	objStatus=replaced -too shallow; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6785; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=2065e110febf58347a0636af4325470e; size=13M
wgEncodeCshlLongRnaSeqHmncpbCellTotalSpikeinsRep1V2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=62e66cb05ed420052df8d0e530faec6d; size=166M
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1; type=bam; md5sum=8f386e4ec415bcc9f7dd56327654c089; size=14G
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1; type=bai; md5sum=df3063d65a7c32488e90615bf7e015bd; size=7.7M
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4c028f76eb9fa3a40e7ce60d4a546250; size=8.7G
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=56d264aeec402bffed2e53914130c706; size=8.4G
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalMinusRep1; type=bigWig; md5sum=74df75369b6400fd257e6fe9ae6fb3b5; size=215M
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalPlusRep1; type=bigWig; md5sum=30147f6100a36ac3174f3e6ee2e2b30e; size=221M
wgEncodeCshlLongRnaSeqHmscat010260412CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=f4bd936a6877e295fb560bdc78ec1e99; size=143M
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2; type=bam; md5sum=476cb8ad60bc3f9f7268b027579f1544; size=20G
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2; type=bai; md5sum=2ca8e052a7c63f0172026d21b29b82ad; size=8.8M
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=e6f9dd4f3d7f7f1cf1aeabc73a13f492; size=13G
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=1969a52b13f58cb137a641e59e5e9f7d; size=13G
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalMinusRep2; type=bigWig; md5sum=4a874239552bf5cdca87b92713904be9; size=371M
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalPlusRep2; type=bigWig; md5sum=2fc20cf6a3cea28452896064ec828fce; size=391M
wgEncodeCshlLongRnaSeqHmscat906160112CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=6b58260a21a1c6220e0d0b24b3d8422d; size=288M
wgEncodeCshlLongRnaSeqHmscatCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6025; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscatCellTotalContigs; type=bedRnaElements; md5sum=e78420e4ff9a389798b77437dae24a93; size=28M
wgEncodeCshlLongRnaSeqHmscatCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6939; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=c65ef5d981e989c33c0c5a79f7927206; size=20M
wgEncodeCshlLongRnaSeqHmscatCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6371; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=e74d46b346fc5be39be18a8990d57ab7; size=20M
wgEncodeCshlLongRnaSeqHmscatCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7409; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=5a05f1e0e49fcf06bebe06a5c6402bb0; size=5.8M
wgEncodeCshlLongRnaSeqHmscatCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6371; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fa049fcc629d827930cea1725a5b231d; size=1.9M
wgEncodeCshlLongRnaSeqHmscatCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6063; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscatCellTotalJunctions; type=bedRnaElements; md5sum=4c138a124acd9ef9c2711307185b936b; size=11M
wgEncodeCshlLongRnaSeqHmscatCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6874; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=3de6d2be31d84f522b91767008fc6d00; size=244K
wgEncodeCshlLongRnaSeqHmscatCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6879; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=1cd35b82bf53fd0d524613321ea4cc85; size=250K
wgEncodeCshlLongRnaSeqHmscatCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7409; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=36cf3ca5c1b1fc1675e503c5db8cdb1d; size=6.5M
wgEncodeCshlLongRnaSeqHmscatCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6371; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscatCellTotalTranscriptGencV10; type=gtf; md5sum=e8655b6c9476472fbaa411d4e550c7e2; size=5.0M
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2; type=bam; md5sum=ad25d4ec87cccf26a64cac2afaffeee0; size=24G
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2; type=bai; md5sum=9ed6c587c6e91d41256d112164732649; size=8.9M
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=7c6be24a34ac1cb70ec0b2ab29bb4f41; size=15G
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=a188b37fc5e4a7906ea52a8d7deb1437; size=15G
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalMinusRep2; type=bigWig; md5sum=6aea942f81dbcd609ff91737bea585f5; size=310M
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalPlusRep2; type=bigWig; md5sum=b008c0090fdb9677b549a42f28133e74; size=316M
wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=e1f215ba3f3fe98eff1d492b771471e7; size=98M
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1; type=bam; md5sum=983f7479d15a52f29a03c37f02ec0923; size=21G
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1; type=bai; md5sum=ee42f8d35807ab4ab0f8c878b25e5a0e; size=8.7M
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d8bb5e9322e35ec6200c50c6d6402b3e; size=13G
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=930f80901b069f5bb2f83ae27df1f980; size=13G
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalMinusRep1; type=bigWig; md5sum=f49676ff01812cd2af594afff8cff629; size=312M
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalPlusRep1; type=bigWig; md5sum=d6e37a151d90caa86da8750f4be5b5c0; size=317M
wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=b18c00b1c6ffbbe9abd7df9e4b09108e; size=151M
wgEncodeCshlLongRnaSeqHmscbmCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6020; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbmCellTotalContigs; type=bedRnaElements; md5sum=94059e0677273b9b8fd40e01c90f6ed0; size=34M
wgEncodeCshlLongRnaSeqHmscbmCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6932; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=cc76b09197488866a366eb214855efe5; size=21M
wgEncodeCshlLongRnaSeqHmscbmCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6366; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6580625de8c0ea2fe0cd41ea63937023; size=20M
wgEncodeCshlLongRnaSeqHmscbmCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7404; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=9bd82d89458691ee407571607e55f8ed; size=6.7M
wgEncodeCshlLongRnaSeqHmscbmCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6366; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=b6ecdd5aad06b1e9b7465b776f85568f; size=1.9M
wgEncodeCshlLongRnaSeqHmscbmCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6057; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbmCellTotalJunctions; type=bedRnaElements; md5sum=187a99b9bfe8d6d7f7d66d98f329f6b7; size=12M
wgEncodeCshlLongRnaSeqHmscbmCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6898; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9cd161ac1a3cd9999a2028fc0474d914; size=249K
wgEncodeCshlLongRnaSeqHmscbmCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6902; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=ec782c2cae001170a2569349b3d86f8e; size=241K
wgEncodeCshlLongRnaSeqHmscbmCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7404; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=52792a0fe20741af2e8851f6a2db09f6; size=7.3M
wgEncodeCshlLongRnaSeqHmscbmCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6366; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbmCellTotalTranscriptGencV10; type=gtf; md5sum=c16acd3251b0c83f1014e5ea899ac4c6; size=5.0M
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1; type=bam; md5sum=4f2a8deff75bba30d4d8e20e188e4409; size=16G
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1; type=bai; md5sum=5a044c15c036ad5d6887f040b6db6884; size=7.9M
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fa479af2ea160f54679ed829259c4b61; size=9.6G
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d0d1b5ba02bbae64e3d9be1ce1de538a; size=9.1G
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalMinusRep1; type=bigWig; md5sum=54779270732dfab3c7b4fc3d90adb21b; size=257M
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalPlusRep1; type=bigWig; md5sum=4c753645550c00c790bdd80a685893c2; size=266M
wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=464719e4ae473495c27b4eed4886cec9; size=111M
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2; type=bam; md5sum=83c2fe6e5b2c44f2391f685d9888a081; size=14G
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2; type=bai; md5sum=ffdd48b36a0cdd6c3d3f48c294443a0c; size=7.7M
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=403ce4d464f7de5e9bdec8658649a477; size=8.3G
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dce09f91ce9a7318e833b00a47b90908; size=8.0G
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalMinusRep2; type=bigWig; md5sum=ea5b2b86fb1e0d970f2e2d43a83767f1; size=234M
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalPlusRep2; type=bigWig; md5sum=54c530b700e0f12f516cfebcbc48fb32; size=242M
wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0ad2724a5d0fa3316002e13e4ea16f2e; size=83M
wgEncodeCshlLongRnaSeqHmscucCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6045; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscucCellTotalContigs; type=bedRnaElements; md5sum=55a0e183dbb8dadf9631e99e2729bf61; size=34M
wgEncodeCshlLongRnaSeqHmscucCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7024; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=b95ec35906d1d9979742ee551645bdd4; size=17M
wgEncodeCshlLongRnaSeqHmscucCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6392; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=2b6d0fa6eded1bb775880b3162633124; size=20M
wgEncodeCshlLongRnaSeqHmscucCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7433; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=da4ce934c0e776b66cb92382b237ee29; size=3.8M
wgEncodeCshlLongRnaSeqHmscucCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6392; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=b8ec81dbd005edc4093fe287d1e433e9; size=1.9M
wgEncodeCshlLongRnaSeqHmscucCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6075; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscucCellTotalJunctions; type=bedRnaElements; md5sum=9c55ae4577c36f6644abaa9ad624cc94; size=10M
wgEncodeCshlLongRnaSeqHmscucCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7678; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=7cd2f2076eb7b562822e74ca3fff0efc; size=263K
wgEncodeCshlLongRnaSeqHmscucCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7682; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=31176f8c56376ceecc42a7d5ba3496d6; size=261K
wgEncodeCshlLongRnaSeqHmscucCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7433; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=872df8b29d2d9e5b898fad24d96dbf80; size=4.3M
wgEncodeCshlLongRnaSeqHmscucCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6392; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscucCellTotalTranscriptGencV10; type=gtf; md5sum=f3d1592ca3acfd2e8c2bd31d96d0e520; size=5.0M
wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2; type=bam; md5sum=369bc76090941726fd706473a306eba0; size=26G
wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2; type=bai; md5sum=388281aaec6d557dd08e8c9fe5382c55; size=9.3M
wgEncodeCshlLongRnaSeqHob00902021CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c55fd1fee92cd51d12574b358e7ac7f4; size=16G
wgEncodeCshlLongRnaSeqHob00902021CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0cf9638b8964917665bd5b6aace9937e; size=16G
wgEncodeCshlLongRnaSeqHob00902021CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalMinusRep2; type=bigWig; md5sum=280b2c95e67d836e5f1ab36db44e24d9; size=330M
wgEncodeCshlLongRnaSeqHob00902021CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalPlusRep2; type=bigWig; md5sum=e68bd87e10f3f97efffdacf1e4143cce; size=338M
wgEncodeCshlLongRnaSeqHob00902021CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=6ae2482f9a12855710ec67261dc3d199; size=274M
wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1; type=bam; md5sum=5d4eb12039a3777104091fd6d4ddac2e; size=27G
wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1; type=bai; md5sum=06be710d1e924ae051d53aad40347b25; size=9.3M
wgEncodeCshlLongRnaSeqHob0091301CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=98c25d8c5db8ff4e47b35df3e2eceda5; size=17G
wgEncodeCshlLongRnaSeqHob0091301CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=87f416893ff9dce0f6699520bb16aa59; size=17G
wgEncodeCshlLongRnaSeqHob0091301CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalMinusRep1; type=bigWig; md5sum=405aa0083f9ff0d3a4f688ddf46dfe5c; size=273M
wgEncodeCshlLongRnaSeqHob0091301CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalPlusRep1; type=bigWig; md5sum=8505ea60ede18bc18b1f9b94f74bb609; size=278M
wgEncodeCshlLongRnaSeqHob0091301CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=42b35c83d1107fd2681b0df0950399f0; size=265M
wgEncodeCshlLongRnaSeqHobCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6038; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHobCellTotalContigs; type=bedRnaElements; md5sum=517c6702d07046dace81566a4ab483f8; size=33M
wgEncodeCshlLongRnaSeqHobCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7013; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=5c2dee1f89fbc476634f5b0dd57e309f; size=20M
wgEncodeCshlLongRnaSeqHobCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6383; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=45752a96e308636a69e8a4530b2ce176; size=20M
wgEncodeCshlLongRnaSeqHobCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7422; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=7a824348ee02901a99215f655a8fe5ed; size=6.9M
wgEncodeCshlLongRnaSeqHobCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6383; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=1a2fa64c16b59453a6456a4af3940c15; size=1.9M
wgEncodeCshlLongRnaSeqHobCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6066; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHobCellTotalJunctions; type=bedRnaElements; md5sum=33a7a61ce33439af874046e4699a5726; size=13M
wgEncodeCshlLongRnaSeqHobCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=edc758b5cb107d059d41e425beaad6b6; size=297K
wgEncodeCshlLongRnaSeqHobCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6880; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=ba275078d7f7e6c4c55a09473a02f282; size=295K
wgEncodeCshlLongRnaSeqHobCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7422; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=c8ab9d46ed78c48dba07929d3927dcdd; size=7.5M
wgEncodeCshlLongRnaSeqHobCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6383; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHobCellTotalTranscriptGencV10; type=gtf; md5sum=f4748c0a35b6e19b327f41f6ad53ddb7; size=4.9M
wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1; type=bam; md5sum=831510aa645faf07832ae939ed9c91f5; size=17G
wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1; type=bai; md5sum=529a816aeac52cdcfbbfdd16614e62b6; size=8.1M
wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2; type=bam; md5sum=e1a2b4299fca57118ed9495902e8b47c; size=20G
wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2; type=bai; md5sum=b4dead100a0fec96eada695e9fb15117; size=8.4M
wgEncodeCshlLongRnaSeqHpcplCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6037; geoSampleAccession=GSM981255; labExpId=LID47301,LID47104; bioRep=071WC,072WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalContigs; type=bedRnaElements; md5sum=489165eeef8a0c81ce783de2fb41e44c; size=31M
wgEncodeCshlLongRnaSeqHpcplCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0032601.13,0101504.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6971; geoSampleAccession=GSM981255; labExpId=LID47104,LID47301; bioRep=072WC,071WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=838bc4c5e6d039510842af4978ad3fca; size=18M
wgEncodeCshlLongRnaSeqHpcplCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0032601.13,0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6387; geoSampleAccession=GSM981255; labExpId=LID47104,LID47301; bioRep=072WC,071WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=721f58435ddc6b0e1d18c651f2617898; size=20M
wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=203990161f548904cd97fcabd8ade62a; size=9.5G
wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=5f08786946ce1a50bcdf57af1b450c27; size=13G
wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=f33cefb683b8ad0bd5c998b237addedd; size=9.5G
wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dcceecfa6162095761b28ee05f043e5a; size=13G
wgEncodeCshlLongRnaSeqHpcplCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0032601.13,0101504.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7428; geoSampleAccession=GSM981255; labExpId=LID47104,LID47301; bioRep=072WC,071WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=7966f92c6033e98fc42d5ab1d8811ab3; size=5.2M
wgEncodeCshlLongRnaSeqHpcplCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0032601.13,0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6387; geoSampleAccession=GSM981255; labExpId=LID47104,LID47301; bioRep=072WC,071WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=3f11705c1ab8c8ed658688864114d0f4; size=1.9M
wgEncodeCshlLongRnaSeqHpcplCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6065; geoSampleAccession=GSM981255; labExpId=LID47301,LID47104; bioRep=071WC,072WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalJunctions; type=bedRnaElements; md5sum=f91a17a2c6d8fc33f597cd48bdb2c66e; size=10M
wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep1; type=bigWig; md5sum=e7d7573c251dc0d4b9cc1e789cee7318; size=228M
wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep2; type=bigWig; md5sum=2b00ccaa53a7780b7514a749e6ab81bf; size=267M
wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep1; type=bigWig; md5sum=9e4f5a1743c027eee25e36b55670ed5c; size=236M
wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep2; type=bigWig; md5sum=1a53de86ab79c8be02fcedf0916bc6c8; size=272M
wgEncodeCshlLongRnaSeqHpcplCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7674; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=70c955c69fe2fef4248437f1e086237d; size=279K
wgEncodeCshlLongRnaSeqHpcplCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6863; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=dbc3d6f44e488cbe8ad9a4705bd3b603; size=250K
wgEncodeCshlLongRnaSeqHpcplCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=aca96e8c0a8d947d53735f8cc74a00a1; size=117M
wgEncodeCshlLongRnaSeqHpcplCellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=6a0a1e73fba7aa1b541bdada9dc3d3f7; size=274M
wgEncodeCshlLongRnaSeqHpcplCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0032601.13,0101504.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7428; geoSampleAccession=GSM981255; labExpId=LID47104,LID47301; bioRep=072WC,071WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=997c360db0bd8c28c771b32119b01737; size=5.8M
wgEncodeCshlLongRnaSeqHpcplCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0032601.13,0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6387; geoSampleAccession=GSM981255; labExpId=LID47104,LID47301; bioRep=072WC,071WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalTranscriptGencV10; type=gtf; md5sum=152a0fcc5f422b9c56f01dd834d13354; size=5.0M
wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1; type=bam; md5sum=278aff92ea2094f1db87a4c6201c6c96; size=16G
wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1; type=bai; md5sum=975e324c7b03949876446396bc8497c0; size=8.0M
wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2; type=bam; md5sum=b5923ad2e51e9ae442f83cd56c14dce1; size=21G
wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2; type=bai; md5sum=47abfa6fda477b035fb00e85817ee94d; size=8.4M
wgEncodeCshlLongRnaSeqHpiepcCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6028; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalContigs; type=bedRnaElements; md5sum=fd4d66a8f9dd9be09300d1f03efa69d8; size=32M
wgEncodeCshlLongRnaSeqHpiepcCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6957; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=479ebfe1fe28fb2badc9c7cef0429dc0; size=19M
wgEncodeCshlLongRnaSeqHpiepcCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6374; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=1440b05129a7f94fb919807f22c8f003; size=20M
wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dac12c61fe9f6df6d67e6015fd728da1; size=11G
wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=bc67d07e7a1e9cd1aa704b3b8b0954f1; size=13G
wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fe2597dd97ad8f74e0a8af854ba004af; size=11G
wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0ddde35683c2af832245f9d447580832; size=13G
wgEncodeCshlLongRnaSeqHpiepcCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7416; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=e0dbfe0cf8b01a88496875c94de62599; size=7.3M
wgEncodeCshlLongRnaSeqHpiepcCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6374; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=cccf2c43bd2bc2560b88bf6918bf3b2a; size=1.9M
wgEncodeCshlLongRnaSeqHpiepcCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6073; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalJunctions; type=bedRnaElements; md5sum=664ca547223a8991cf5182a51758cf40; size=9.5M
wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep1; type=bigWig; md5sum=8754db45e64fe82ff307d667a06515aa; size=185M
wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep2; type=bigWig; md5sum=e1e7416128256a066339226349eb1689; size=216M
wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep1; type=bigWig; md5sum=78eb4e27dcba6b851895abd398406b68; size=193M
wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep2; type=bigWig; md5sum=baeecd78ae91f947d42949c6554e6fa2; size=224M
wgEncodeCshlLongRnaSeqHpiepcCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6899; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=8fc7155b250e4f7e8e7de8743af63ccf; size=249K
wgEncodeCshlLongRnaSeqHpiepcCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6906; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=6fe51d2c4d408756ffb4419b4b06b2ed; size=291K
wgEncodeCshlLongRnaSeqHpiepcCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=a56fcc5f3a5b2b7b6ef6f6f95f30b119; size=282M
wgEncodeCshlLongRnaSeqHpiepcCellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=83cffd9b718f9a8f943a1de627fdc6f0; size=350M
wgEncodeCshlLongRnaSeqHpiepcCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7416; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=8718abef44f0234aacb74644fd431e8c; size=8.0M
wgEncodeCshlLongRnaSeqHpiepcCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6374; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalTranscriptGencV10; type=gtf; md5sum=da9c68caf5ab918d613b437618b7d02b; size=4.9M
wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1; type=bam; md5sum=04ec3073ece9b688db457206c48ee8aa; size=17G
wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1; type=bai; md5sum=7ec42ce9d869377cd23e5b4d25b6a9bb; size=8.2M
wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2; type=bam; md5sum=48df7f1c2f88c91ba2bb18b7e26d92cf; size=15G
wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2; type=bai; md5sum=37e04b2603e89a12f7e36070876bcb91; size=7.7M
wgEncodeCshlLongRnaSeqHsavecCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9100101.15,0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6027; geoSampleAccession=GSM984613; labExpId=LID47261,LID47260; bioRep=094WC,093WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalContigs; type=bedRnaElements; md5sum=047c8dc3d8c68a2240ad7a0f1cfcf0a1; size=30M
wgEncodeCshlLongRnaSeqHsavecCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9100101.15,0022202.16; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6994; geoSampleAccession=GSM984613; labExpId=LID47261,LID47260; bioRep=094WC,093WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=bffdb6f31b43cd3c07e1dffa08df30ff; size=17M
wgEncodeCshlLongRnaSeqHsavecCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6373; geoSampleAccession=GSM984613; labExpId=LID47260,LID47261; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=ff3c013765f89fd7d2a72d2ee1b505bd; size=20M
wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=17bfac4ad60a28da9ce251e06c7c8052; size=11G
wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4836a08b4dabb3bc2dd81ccc1a286ee9; size=9.1G
wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d47016feae6245cd97cf8f4e11c9f14d; size=11G
wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fbb0f82aa862fdd04632899e9a9fdd19; size=8.8G
wgEncodeCshlLongRnaSeqHsavecCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9100101.15,0022202.16; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7411; geoSampleAccession=GSM984613; labExpId=LID47261,LID47260; bioRep=094WC,093WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=1ca52bebb3c6efbfa840813354efc3f3; size=4.3M
wgEncodeCshlLongRnaSeqHsavecCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6373; geoSampleAccession=GSM984613; labExpId=LID47260,LID47261; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6b0b5e01819c06d3ca1d845b1dbd5b6c; size=1.9M
wgEncodeCshlLongRnaSeqHsavecCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9100101.15,0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6069; geoSampleAccession=GSM984613; labExpId=LID47261,LID47260; bioRep=094WC,093WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalJunctions; type=bedRnaElements; md5sum=4901d29e9caa141ede035013af403203; size=11M
wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep1; type=bigWig; md5sum=edbf11999e849996c3a5d7f6a3c166f4; size=277M
wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep2; type=bigWig; md5sum=2dcd88e100d73a79969d6758053b6b75; size=200M
wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep1; type=bigWig; md5sum=a1d4729c43643a7dbc93b42c810ca633; size=279M
wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep2; type=bigWig; md5sum=5702afcb563c42d4b43f35d05ecf2208; size=202M
wgEncodeCshlLongRnaSeqHsavecCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6886; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=866058fc6346258a88e62b07d65f7fbd; size=269K
wgEncodeCshlLongRnaSeqHsavecCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6866; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=6bfba9f76dd3f2217872bf06642d9754; size=264K
wgEncodeCshlLongRnaSeqHsavecCellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=2cf43b7a746038bb948ba986dbc3085a; size=292M
wgEncodeCshlLongRnaSeqHsavecCellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=dd1ef65f2cd1065a51562b4ba81769a2; size=143M
wgEncodeCshlLongRnaSeqHsavecCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9100101.15,0022202.16; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7411; geoSampleAccession=GSM984613; labExpId=LID47261,LID47260; bioRep=094WC,093WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=3caf55a9673520ada96f412699c226fe; size=4.8M
wgEncodeCshlLongRnaSeqHsavecCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6373; geoSampleAccession=GSM984613; labExpId=LID47260,LID47261; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalTranscriptGencV10; type=gtf; md5sum=db5505005bf97d5d483a980be598180e; size=4.9M
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1; type=bam; md5sum=f122a2f44c4afc1282e8c13692e73c04; size=6.1G
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1; type=bai; md5sum=72d4a45e642cb912fffee8ae67b66464; size=5.3M
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2; type=bam; md5sum=e80b66c54edd1e499228678fa38a8fd3; size=6.5G
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2; type=bai; md5sum=340205cd8cf59bd01ae34836857eb666; size=5.8M
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9f5c105ba6b252efe8e4d65889be2d2a; size=7.6G
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8554820be8269d470b46ad19511a7599; size=7.3G
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6db1e0daf9f8bdc9bfcf063a94883cdb; size=7.5G
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=de28bf6442e274604e62610dceeb7440; size=7.7G
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=a06b15f8a5f4de8114bc4bd3d18e57e0; size=134M
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=2f811554c78ffeac501a88b55ee02ad5; size=155M
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=5b9f524892a55e44eeb2c853dabd7c42; size=138M
wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=3c1bc64972ca57495682acf98dcef61a; size=160M
wgEncodeCshlLongRnaSeqHsmmCellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPamContigs; type=bedRnaElements; md5sum=d6aed0607983086ad99eeeb1d75e5ef4; size=5.4M
wgEncodeCshlLongRnaSeqHsmmCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6995; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b4287e0f607c074f4a84854486591dda; size=3.9M
wgEncodeCshlLongRnaSeqHsmmCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4605; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b13a8f4225ca6ff38d5c3a01d4788574; size=18M
wgEncodeCshlLongRnaSeqHsmmCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6eb0f0688264e4d721509b96ffad4114; size=549K
wgEncodeCshlLongRnaSeqHsmmCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7451; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labProtocolId=023WC-,024WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6efeed7c1d2a6979d14678531ddd2325; size=827K
wgEncodeCshlLongRnaSeqHsmmCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4605; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=53681df939f9893719fe2d8262707e87; size=2.0M
wgEncodeCshlLongRnaSeqHsmmCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPamJunctions; type=bedRnaElements; md5sum=4daee15179a3eb88bb1a9bdac543c0c9; size=3.8M
wgEncodeCshlLongRnaSeqHsmmCellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8e9bedeea5f3a665d84bba7ef245cce0; size=433K
wgEncodeCshlLongRnaSeqHsmmCellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4c81021f42ea603432e9bf594c848a6a; size=432K
wgEncodeCshlLongRnaSeqHsmmCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4198; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=47cf5b43873d44d147878782eb3c83b1; size=960M
wgEncodeCshlLongRnaSeqHsmmCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4249; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2a2a133edd213323eaea02133fcb36a1; size=853M
wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=69b35ca646d56f9736cffa9a30a45105; size=3.2M
wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7451; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labProtocolId=023WC-,024WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=56710b3661516950c12070460c751e53; size=1.1M
wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4605; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptGencV7; type=gtf; md5sum=0e24828e5307dead5b07fe41254b3899; size=4.5M
wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1; type=bam; md5sum=8d64b01d54312d99b29675fca5d8ec84; size=12G
wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1; type=bai; md5sum=55e6aa86b7d1017acf1cf6e9aa965346; size=6.4M
wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4051; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2; type=bam; md5sum=5ca5f66f8e40398e04dac616993e4c01; size=14G
wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4051; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2; type=bai; md5sum=022721bd91c729d852a3b24b90db2fe9; size=6.7M
wgEncodeCshlLongRnaSeqHsmmCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapContigs; type=bedRnaElements; md5sum=e9bd75d1a165580480967ee89a27be95; size=11M
wgEncodeCshlLongRnaSeqHsmmCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7009; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ab9ed9926359345ff7cf1799568ad439; size=6.1M
wgEncodeCshlLongRnaSeqHsmmCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4587; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bac50d3d0823913000cdf4ea03a2e538; size=19M
wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a8a9d0c320c925be22bd689671d0052f; size=7.6G
wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=26b3ff540b702363f476290f9cf6a68f; size=8.5G
wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=908afd5c94a524b2165bcb1b064592ea; size=7.7G
wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6837ea08a9953b611bf86558b203d335; size=8.6G
wgEncodeCshlLongRnaSeqHsmmCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=88d988438d81e7abe78ad84aa58b37d6; size=957K
wgEncodeCshlLongRnaSeqHsmmCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7480; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labProtocolId=023WC+,024WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=cc54c2cbba4b607b873849d857226f09; size=843K
wgEncodeCshlLongRnaSeqHsmmCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4587; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=350aed9163622945dcc2f831df29637f; size=2.0M
wgEncodeCshlLongRnaSeqHsmmCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapJunctions; type=bedRnaElements; md5sum=6507d598201091f453efa7fccdb7f408; size=8.2M
wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep1; type=bigWig; md5sum=a28fe167cc029ca8f6126a9aba3144d9; size=331M
wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep2; type=bigWig; md5sum=e3889b4a196f36bf230b16ffa8a177ab; size=497M
wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep1; type=bigWig; md5sum=1a8b3edccda962b37f115d6042db9a29; size=342M
wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep2; type=bigWig; md5sum=1af1b7f8f95d7e2a6e92ec0de11dcae1; size=514M
wgEncodeCshlLongRnaSeqHsmmCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=c6abf847160aa903ba5b2bb58bd5eb51; size=581K
wgEncodeCshlLongRnaSeqHsmmCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8076165b83059dd60c961cafc704e9b6; size=576K
wgEncodeCshlLongRnaSeqHsmmCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4261; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6055166459ed81545ee33d39506b4fcb; size=130M
wgEncodeCshlLongRnaSeqHsmmCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4246; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=fb958d17c4f0087631da80a6ddbe3396; size=179M
wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d86627551b4a0936ee46e75edf7793ec; size=12M
wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7480; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labProtocolId=023WC+,024WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=84ac3f86d8fd876cd0c0ee5a63ec1e42; size=1.2M
wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4587; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptGencV7; type=gtf; md5sum=47caebb06dd080ffb941bb2461e8dde3; size=5.0M
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1; type=bam; md5sum=17ef75ddc34bf73f1ac66e5c7eee7acb; size=9.7G
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1; type=bai; md5sum=3566d936255f186321352927dd6d2c97; size=7.1M
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2; type=bam; md5sum=e5d6ef1eaa682847c97f9d20c8b92c8c; size=6.7G
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2; type=bai; md5sum=c36f0f4506e2417e42934238ba3ae307; size=6.7M
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bc95db8ef05b610e2f34964ed4216318; size=6.7G
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f09e29d5478edec9324f694476fe6036; size=5.0G
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=170a7435d417e0dd197a86452c3078aa; size=6.7G
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=594c90e69113f6c486f9efab32e32188; size=4.9G
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=8b5f82a7675be92488259b7403561279; size=192M
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=a7a35220a9becc1ba9142ba9e6e12135; size=153M
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=e427102b798b568407c58059dc5a1e4d; size=196M
wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=69848abec6e79c103c67a775fea23bde; size=155M
wgEncodeCshlLongRnaSeqHuvecCellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPamContigs; type=bedRnaElements; md5sum=1b80e5b935908b2199f750e99b249b7a; size=17M
wgEncodeCshlLongRnaSeqHuvecCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6955; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0f850d5d50b33265058752fc3b92d017; size=11M
wgEncodeCshlLongRnaSeqHuvecCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4565; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ac0920133ecd061e7a8bfff165ed97a1; size=18M
wgEncodeCshlLongRnaSeqHuvecCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=570e9f72615b4c9c10d1ebbef5fb98d1; size=4.1M
wgEncodeCshlLongRnaSeqHuvecCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7456; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labProtocolId=009WC-,010WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=56fc1c5a032f7f395fd3c319078d05cc; size=5.6M
wgEncodeCshlLongRnaSeqHuvecCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4565; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2574da64afc7e07d304a7aacc64a1f77; size=2.0M
wgEncodeCshlLongRnaSeqHuvecCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPamJunctions; type=bedRnaElements; md5sum=9d0e7a5414a0070367a660af98164c28; size=4.8M
wgEncodeCshlLongRnaSeqHuvecCellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=124eca194f4398d009f65016d4552b4f; size=443K
wgEncodeCshlLongRnaSeqHuvecCellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f32195fdfd7f970367f88b7d73daa4c7; size=442K
wgEncodeCshlLongRnaSeqHuvecCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4255; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=886c58793cc44619bf9128784270044a; size=110M
wgEncodeCshlLongRnaSeqHuvecCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4269; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b651fc4606d22b88ec815c345300e2de; size=80M
wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=846a95831083de9fe31b5d16e6b188ff; size=20M
wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7456; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labProtocolId=009WC-,010WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c865c2a438d15fe3e05cc361d2bd55d3; size=6.1M
wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4565; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptGencV7; type=gtf; md5sum=7852ef9fb92f41e79dfe2a4aa7a59ef1; size=4.8M
wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1; type=bam; md5sum=fbcd4ec3baa483a3517b6c60adeaf5b7; size=8.5G
wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1; type=bai; md5sum=41bdab8d8dc2d535fcb17b63ea6252a6; size=6.5M
wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2; type=bam; md5sum=f7d81fc8b284e78252739950d0fc82de; size=11G
wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2; type=bai; md5sum=55f6c3400c4c25a4bfe4b6deb489eefb; size=6.7M
wgEncodeCshlLongRnaSeqHuvecCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapContigs; type=bedRnaElements; md5sum=8cb2bf627679c4a15e9b72707b2fa413; size=16M
wgEncodeCshlLongRnaSeqHuvecCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6996; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=d7428fa4e57ca6e882e33909685fac3d; size=6.4M
wgEncodeCshlLongRnaSeqHuvecCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4564; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4bec3c916509595f7a3b025c9772e495; size=19M
wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4b00b8debf1a9df6f44fb6d174625ee6; size=5.4G
wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d5fc5292497603975fc342ac7ec7b0a3; size=6.8G
wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8c3d3a819cdff619170309a1fcc2ce09; size=5.5G
wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9229bda161ee6cd38f185eff15e79165; size=7.0G
wgEncodeCshlLongRnaSeqHuvecCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6f50ea019c78010150ba1ceefac9b74e; size=1.4M
wgEncodeCshlLongRnaSeqHuvecCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7459; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labProtocolId=009WC+,010WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=309e6350ff5cdf3d15c03fa041337bca; size=1.5M
wgEncodeCshlLongRnaSeqHuvecCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4564; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=825aec3fd9fc65c1dbda7f72d7c72eaf; size=2.0M
wgEncodeCshlLongRnaSeqHuvecCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapJunctions; type=bedRnaElements; md5sum=1f5bc55dfca568db07839d3924af7d0e; size=8.7M
wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep1; type=bigWig; md5sum=1dc80cd15e3e0fc1fece94d66ed9362b; size=524M
wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep2; type=bigWig; md5sum=c5dc54a3c6773fb83de0b60c43bd74ed; size=561M
wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep1; type=bigWig; md5sum=e94d2e4799df71c7d8cb5555e5073e99; size=540M
wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep2; type=bigWig; md5sum=6454ddaa5cf42f913f8d88e6ac7c26d6; size=578M
wgEncodeCshlLongRnaSeqHuvecCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=7bf689dab6c2bfa9fc058bf57f1dadce; size=1.2M
wgEncodeCshlLongRnaSeqHuvecCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=006126d0d65e6e3272a76d93eb2d3cf7; size=1.2M
wgEncodeCshlLongRnaSeqHuvecCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4286; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c560f68c63e964215844c8be85dc660c; size=12M
wgEncodeCshlLongRnaSeqHuvecCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4204; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4475a8ce3ec32d5408052e2fbd8384dd; size=20M
wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ef0e39cd08817f9e5f95466d1588d64a; size=14M
wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7459; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labProtocolId=009WC+,010WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3e67512720a188be1d3facc916744d7b; size=1.9M
wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4564; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptGencV7; type=gtf; md5sum=2f22005d5e2919203c63274c22e2b0f4; size=5.0M
wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3; type=bam; md5sum=f50e368c0dd3ae3a4d6551ab0e8c19a7; size=7.0G
wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3; type=bai; md5sum=5756462bd7c1afc211e3d7ef385948ae; size=4.7M
wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5305e74f8f7e5b557481e943c1159086; size=4.2G
wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2c327276d4f379ec2a945753af436151; size=4.7G
wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=7eae85ef1b359f1178d5b90ff609da76; size=35M
wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=bc189ef51cf1faafc1aab367ce3845bf; size=36M
wgEncodeCshlLongRnaSeqHuvecCytosolPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamContigs; type=bedRnaElements; md5sum=026cb2157ea5466df1171942b0ead3fa; size=8.7M
wgEncodeCshlLongRnaSeqHuvecCytosolPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamContigsV2; type=bedRnaElements; md5sum=fadc4d042c34e7dfbcf0d95cf75416b5; size=8.7M
wgEncodeCshlLongRnaSeqHuvecCytosolPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6943; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=06da9b0d0c89c67b5c3d9e11f3667cc3; size=3.5M
wgEncodeCshlLongRnaSeqHuvecCytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4552; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b3deb5d743efc30a33a2a22f72964b13; size=16M
wgEncodeCshlLongRnaSeqHuvecCytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=06b1c6b4f732ea06d07af286639fa596; size=459K
wgEncodeCshlLongRnaSeqHuvecCytosolPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7446; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labProtocolId=029C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=63826151c75217673db485e7a410c9bc; size=553K
wgEncodeCshlLongRnaSeqHuvecCytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4552; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4ec4383a4ca9935d36c139dc6e45782c; size=1.8M
wgEncodeCshlLongRnaSeqHuvecCytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamJunctions; type=bedRnaElements; md5sum=ba461428aab413747ac2ac99f82a377d; size=1.9M
wgEncodeCshlLongRnaSeqHuvecCytosolPamProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e470757cfa33e390c0b0a78880d1f2e3; size=500K
wgEncodeCshlLongRnaSeqHuvecCytosolPamSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4199; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=0cb72bb1492f3a0056d4aa194e90987d; size=111M
wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a6cbd3efa6a43cc7d14e3eeec284b234; size=3.9M
wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7446; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labProtocolId=029C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b5f4ed4140ddf4c51f0d477192301125; size=853K
wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4552; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptGencV7; type=gtf; md5sum=b469974551fc8d322fe31d0ec0cf3efc; size=4.0M
wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3; type=bam; md5sum=1d4d5e028c4e7d8bcacc4427b21f0769; size=12G
wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3; type=bai; md5sum=aa9303053f865231c2ffc678259eade2; size=6.4M
wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4; type=bam; md5sum=86a9a991dc1cccbf1b24b217e3851325; size=12G
wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4; type=bai; md5sum=3d9dc61a6f4a2484ee7a92675af03ca3; size=6.4M
wgEncodeCshlLongRnaSeqHuvecCytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapContigs; type=bedRnaElements; md5sum=d0c878c595f411969bf69229d40933c2; size=8.6M
wgEncodeCshlLongRnaSeqHuvecCytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7021; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1fd91fdef366f85e38f3f43ce71bda03; size=5.9M
wgEncodeCshlLongRnaSeqHuvecCytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4595; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d762442a08388ffa1196b94a1ad478f7; size=19M
wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=55282b27ced58804f0d7504afd6d828c; size=7.4G
wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1864bde2bc026669c13c1a63a9f58dba; size=7.5G
wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ddc96a356431f20287f162b86661440c; size=7.6G
wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=420f04220198807a93ce2644b4eb24ac; size=7.7G
wgEncodeCshlLongRnaSeqHuvecCytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=efafaa29c8085a761263f2d23d8e490a; size=843K
wgEncodeCshlLongRnaSeqHuvecCytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7488; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labProtocolId=029C+,030C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fe27dc858ae1cdce72aefc047e44d336; size=798K
wgEncodeCshlLongRnaSeqHuvecCytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4595; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1c4363a0ac7b4c5356c752a460d951d3; size=2.0M
wgEncodeCshlLongRnaSeqHuvecCytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapJunctions; type=bedRnaElements; md5sum=1ab41d1edcc0cbfecaeb2532e25253d6; size=11M
wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep3; type=bigWig; md5sum=d077c207ae9daae94d878b12410a5c0a; size=334M
wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep4; type=bigWig; md5sum=09e17a6989b7e70350deb2bfd1ffe3e7; size=293M
wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep3; type=bigWig; md5sum=e132ff2d68daf8eafe4b59031ad0692d; size=341M
wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep4; type=bigWig; md5sum=568b49ea017299b22f19180426c5af87; size=300M
wgEncodeCshlLongRnaSeqHuvecCytosolPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f9330ea1e0d8dc05fa849e9859e95299; size=611K
wgEncodeCshlLongRnaSeqHuvecCytosolPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0d565109247a5ec596d72b339190cb3b; size=616K
wgEncodeCshlLongRnaSeqHuvecCytosolPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4257; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c3fff573667b8eb27bdbd74d37bbbb8d; size=179M
wgEncodeCshlLongRnaSeqHuvecCytosolPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4187; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2b4c377fb853d072eda8267d38894acb; size=135M
wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=af1d24826595a5bd768726e9bf5fa6be; size=12M
wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7488; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labProtocolId=029C+,030C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=166b3e0f8a99156233e39940f4b1fde8; size=1.2M
wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4595; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptGencV7; type=gtf; md5sum=ff97afec797cdd0aea9ea3b5d294b1d5; size=5.0M
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3; type=bam; md5sum=b7d48d6d603ad6e0403229b939de2dc8; size=11G
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3; type=bai; md5sum=d5f86ca486efabe56c7cbf4a5aa7e392; size=7.3M
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4; type=bam; md5sum=d03216d944a8de4d64310c59eabbae37; size=14G
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4; type=bai; md5sum=02899aa993840a6bbb6f85884a125623; size=7.9M
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c97f6004abd957a9f4edd6b4676039e1; size=6.1G
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=095cb62b96c89d4f41b9b5364575c2e5; size=8.3G
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=88c3dff6260b3f3bc6ac202faa59f457; size=6.6G
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4f8c7a6c63a17d35f4e1b88a248c2253; size=8.4G
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=e8ebdc66d5e53b53c41a5abc50899a18; size=341M
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep4; type=bigWig; md5sum=65e87aea117e9694091b3dcec5f07ddd; size=422M
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=4cf94b4617e5f65a46106d1b7e47300f; size=346M
wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep4; type=bigWig; md5sum=d84a49618f416edfaee0915317ff5122; size=428M
wgEncodeCshlLongRnaSeqHuvecNucleusPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPamContigs; type=bedRnaElements; md5sum=0c155e04fe5e78b8d1b4ca1d4a44b2a4; size=14M
wgEncodeCshlLongRnaSeqHuvecNucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6997; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=73b34e72efdcb3b01ef6856d1bf6454f; size=13M
wgEncodeCshlLongRnaSeqHuvecNucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4563; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=dcaa1c68d7b94b262c1f7a994cfb8b2d; size=18M
wgEncodeCshlLongRnaSeqHuvecNucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=dcb6af87b04337dfa3fcbe21ae0f90a4; size=6.6M
wgEncodeCshlLongRnaSeqHuvecNucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7458; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labProtocolId=029N-,030N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=af728fc6b420603bf6d1600ea29ab860; size=8.6M
wgEncodeCshlLongRnaSeqHuvecNucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4563; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=94f68c58de055eb4883ab87cd7b89ebb; size=2.0M
wgEncodeCshlLongRnaSeqHuvecNucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPamJunctions; type=bedRnaElements; md5sum=b697fda3050e17adf692818189edf69f; size=7.6M
wgEncodeCshlLongRnaSeqHuvecNucleusPamProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=131c7613b9e65a911829b66dde812092; size=440K
wgEncodeCshlLongRnaSeqHuvecNucleusPamProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=77ef1cbe26b347c4a87f769b6a7152d7; size=436K
wgEncodeCshlLongRnaSeqHuvecNucleusPamSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4284; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=73b5c583d528a36177646f2197464abe; size=106M
wgEncodeCshlLongRnaSeqHuvecNucleusPamSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4206; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=447cf1d57246867cdd42c377db881ec8; size=122M
wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d4d3498323ad8c8a27a35f81cb80de68; size=32M
wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7458; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labProtocolId=029N-,030N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=78716470021e272c43f6bdb0cc043c5c; size=9.3M
wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4563; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptGencV7; type=gtf; md5sum=1a287346344360e88c718f7d0418b329; size=4.8M
wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3; type=bam; md5sum=488cfcb5a9aea8c1d2128327db09fa0a; size=13G
wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3; type=bai; md5sum=0fea8329e45b0affe7aa345281083d56; size=7.7M
wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4; type=bam; md5sum=63cdb6362d78c36b60401d803af249d8; size=13G
wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4; type=bai; md5sum=e59b1f7ad594be1aae9e32740763cae9; size=7.7M
wgEncodeCshlLongRnaSeqHuvecNucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapContigs; type=bedRnaElements; md5sum=6581623e97c6bbc0f006e71120a25c07; size=16M
wgEncodeCshlLongRnaSeqHuvecNucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6982; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bb143ed171896f4d9482682311ddd869; size=8.3M
wgEncodeCshlLongRnaSeqHuvecNucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4602; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=83fb55788caab2446bc23ec61c8e3dda; size=19M
wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7ed2ed46ff604947962b20e0f1eb4d7f; size=7.7G
wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9248b623fc8413362bff5189930a9747; size=7.3G
wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b1d5a7e43bed034136263ca9e8af8fa3; size=7.9G
wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bd6dfa99f526a85f1af11e1e7b9f61ca; size=7.4G
wgEncodeCshlLongRnaSeqHuvecNucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=24043528e409032124cf93d10c10b23a; size=3.5M
wgEncodeCshlLongRnaSeqHuvecNucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7495; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labProtocolId=029N+,030N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bd7f35c262b86ae7723ef8c09e98ce85; size=3.3M
wgEncodeCshlLongRnaSeqHuvecNucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4602; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f84836d075ec0e3e7928c5cc5eef19df; size=2.0M
wgEncodeCshlLongRnaSeqHuvecNucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapJunctions; type=bedRnaElements; md5sum=25f06a13a711d79db8eded5a00d6ebe5; size=12M
wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep3; type=bigWig; md5sum=9bb7e14c2274f8f28993cd24349047f2; size=1.1G
wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep4; type=bigWig; md5sum=2f82698d1775e449740c9ae9ae15181e; size=1.1G
wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep3; type=bigWig; md5sum=5f694c289513eb00eb3d3999a11b0bee; size=1.1G
wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep4; type=bigWig; md5sum=e77027eb545df7448794430f43bd9cbb; size=1.2G
wgEncodeCshlLongRnaSeqHuvecNucleusPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0d0e34011c5c529d797f70b9be089fd8; size=622K
wgEncodeCshlLongRnaSeqHuvecNucleusPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=2774866fa52662dbba39263d7240a031; size=624K
wgEncodeCshlLongRnaSeqHuvecNucleusPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4293; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=55ba0bffd40a5f0c8ac9c2c365fe8c97; size=146M
wgEncodeCshlLongRnaSeqHuvecNucleusPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4210; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=67477602838d3fdcddef6a0226ad0773; size=162M
wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fe7dd11e4cbae9687fe487bee0a229fd; size=25M
wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7495; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labProtocolId=029N+,030N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ab4a67f0f16a9689aec56e35d55a96f2; size=3.8M
wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4602; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptGencV7; type=gtf; md5sum=77d15f80bf2e74cd547562b857747ba1; size=5.0M
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1; type=bam; md5sum=f3792d45f5ad602f338c7d06514acd01; size=27G
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1; type=bai; md5sum=6fb64cd41b487645e7c6833ae765aef4; size=8.9M
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=69a28f1a1e7de04910f9ca726b74b973; size=17G
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c8fd867bdcd582e26de34e9609e11e39; size=17G
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalMinusRep1; type=bigWig; md5sum=3e2041453c0d38e51c4f857fd97a3a53; size=250M
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalPlusRep1; type=bigWig; md5sum=2527edba3d1c39b3f047fe57336de4c2; size=261M
wgEncodeCshlLongRnaSeqHvmf60912033CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=2b4589f48459b15327e7cdba217ec878; size=242M
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2; type=bam; md5sum=a9ea2945de2240919312372788fb51d3; size=27G
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2; type=bai; md5sum=e22df7fb88e7b8a0b75c266049c9facd; size=9.4M
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=3f2007b8e32e6a09a7e928d27bed3681; size=17G
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=25b624f5cb3ce6d110c197f59f4ff22d; size=17G
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalMinusRep2; type=bigWig; md5sum=9a973fa4c7c04c86a8502f0ac71d10b8; size=305M
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalPlusRep2; type=bigWig; md5sum=723a1ff758643b94b77012f135f3f919; size=317M
wgEncodeCshlLongRnaSeqHvmf61004013CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0418e019b875c73444b9dd23b5732e0c; size=226M
wgEncodeCshlLongRnaSeqHvmfCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6023; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmfCellTotalContigs; type=bedRnaElements; md5sum=e6d126bf198473ab5655b8f6305e75ea; size=35M
wgEncodeCshlLongRnaSeqHvmfCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6990; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=2c34da5467204c2a820ae298e2c83dca; size=22M
wgEncodeCshlLongRnaSeqHvmfCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6369; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6db7bfac7e87e539b20f8edea5e5d7ad; size=20M
wgEncodeCshlLongRnaSeqHvmfCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7407; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=e26415474ea78606061aa83e4af4d812; size=8.0M
wgEncodeCshlLongRnaSeqHvmfCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6369; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=0f28fea44d27e0b029131ba5c32ee92d; size=1.9M
wgEncodeCshlLongRnaSeqHvmfCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6061; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmfCellTotalJunctions; type=bedRnaElements; md5sum=7a842320f87147a60b39f1a7bd889a28; size=13M
wgEncodeCshlLongRnaSeqHvmfCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6893; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=4605be57d0e022ce3392af5c4bc5d959; size=299K
wgEncodeCshlLongRnaSeqHvmfCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=1c5bd7bffd386531b70275488471ef46; size=292K
wgEncodeCshlLongRnaSeqHvmfCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7407; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=8b84f4de17fea730660a37ef955ded08; size=8.7M
wgEncodeCshlLongRnaSeqHvmfCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6369; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmfCellTotalTranscriptGencV10; type=gtf; md5sum=a33a5df94b83618dc52fbff4b903d66a; size=4.9M
wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2; type=bam; md5sum=eae75cd92dce55a50271ae098acd1a34; size=21G
wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2; type=bai; md5sum=c709a63e0706034a49cae1880c98110a; size=8.4M
wgEncodeCshlLongRnaSeqHwp0092205CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=032e6d3b4a480bddd205b261841a05d5; size=13G
wgEncodeCshlLongRnaSeqHwp0092205CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dcea0f6b6e368339b14d8dd0491e79bf; size=13G
wgEncodeCshlLongRnaSeqHwp0092205CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalMinusRep2; type=bigWig; md5sum=bea04004b3cfdd3c13bc4eb98f7893f4; size=193M
wgEncodeCshlLongRnaSeqHwp0092205CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalPlusRep2; type=bigWig; md5sum=9c56404fa16845cd13f99d59cbbf69ab; size=199M
wgEncodeCshlLongRnaSeqHwp0092205CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0f82f6fb501c1b2c20f0a5f861952958; size=268M
wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1; type=bam; md5sum=7361c7b7ee72ca26e18798084c035977; size=17G
wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1; type=bai; md5sum=f9628ff1a5f9a5e3fafb4b9615bcd1f5; size=8.2M
wgEncodeCshlLongRnaSeqHwp81202015CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=e06ce99bef092e0ba274cd910c6a1227; size=11G
wgEncodeCshlLongRnaSeqHwp81202015CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=bfbfd961c4f775e695ba6c99513a4899; size=11G
wgEncodeCshlLongRnaSeqHwp81202015CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalMinusRep1; type=bigWig; md5sum=baf55eb39fa4dc9e41a433526e6e96e7; size=295M
wgEncodeCshlLongRnaSeqHwp81202015CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalPlusRep1; type=bigWig; md5sum=ee7d60d63c957cacdfdb7931cc680127; size=303M
wgEncodeCshlLongRnaSeqHwp81202015CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=f91756ebb80d1022b4a22c1bfce30581; size=335M
wgEncodeCshlLongRnaSeqHwpCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6033; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwpCellTotalContigs; type=bedRnaElements; md5sum=6c8a385bf7b6706bc6e4f1b09ae21c9c; size=29M
wgEncodeCshlLongRnaSeqHwpCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=0092205,8120201.5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6951; geoSampleAccession=GSM984620; labExpId=LID47255,LID47254; bioRep=080WC,079WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=f9673950b1263833550ff4ab6b5e7efc; size=18M
wgEncodeCshlLongRnaSeqHwpCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6378; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=d700375601eff310e850ef1ae9b15e72; size=20M
wgEncodeCshlLongRnaSeqHwpCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=0092205,8120201.5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7413; geoSampleAccession=GSM984620; labExpId=LID47255,LID47254; bioRep=080WC,079WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=bc1b770b205475c65833b4305b78054d; size=5.7M
wgEncodeCshlLongRnaSeqHwpCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6378; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=02ee3ec132a6d0b64db4f84b7a3e6511; size=1.9M
wgEncodeCshlLongRnaSeqHwpCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6052; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwpCellTotalJunctions; type=bedRnaElements; md5sum=e5af33d92f94386dfae72b7940da28f0; size=12M
wgEncodeCshlLongRnaSeqHwpCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6883; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9cf446761ea46d05966d908f3a47cddd; size=302K
wgEncodeCshlLongRnaSeqHwpCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=77b6663fa8ec0998ff0288968e1de9fb; size=221K
wgEncodeCshlLongRnaSeqHwpCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=0092205,8120201.5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7413; geoSampleAccession=GSM984620; labExpId=LID47255,LID47254; bioRep=080WC,079WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=d3833f1870785fecb525f6f5593e10d9; size=6.3M
wgEncodeCshlLongRnaSeqHwpCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6378; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwpCellTotalTranscriptGencV10; type=gtf; md5sum=3d453bda79312a9b0e8302c783bb76c7; size=4.9M
wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1; type=bam; md5sum=114d55b835b1da684d17b1c01a866187; size=14G
wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1; type=bai; md5sum=32a744724a9553171f68f08a907ec862; size=8.0M
wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2; type=bam; md5sum=732db7a9ffe6ef3bda55c1ce3d5d3a0e; size=8.8G
wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2; type=bai; md5sum=488f276e1053238367fed3966112ba43; size=6.7M
wgEncodeCshlLongRnaSeqImr90CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6044; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapContigs; type=bedRnaElements; md5sum=607c35255d73bc309212eecd0efbe6b3; size=11M
wgEncodeCshlLongRnaSeqImr90CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6979; geoSampleAccession=GSM981249; labExpId=LID45017,LID45016; bioRep=046WC,045WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=7221bbad86eab126c41a20d29cca6a2d; size=31M
wgEncodeCshlLongRnaSeqImr90CellPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6391; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=d39770eaef5c3b9cf65adf273e4ced59; size=20M
wgEncodeCshlLongRnaSeqImr90CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=c7212d301510b055e2e7876b265df337; size=9.2G
wgEncodeCshlLongRnaSeqImr90CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=6c98b575f3caedb88f054e4444afded6; size=5.9G
wgEncodeCshlLongRnaSeqImr90CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=1a53853d97ed1bf5fd1eb8d036f67f2d; size=9.4G
wgEncodeCshlLongRnaSeqImr90CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=f9875eff772cdafa2292132c659fbffc; size=6.1G
wgEncodeCshlLongRnaSeqImr90CellPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7431; geoSampleAccession=GSM981249; labExpId=LID45017,LID45016; bioRep=046WC,045WC; labProtocolId=046WC+,045WC+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=bd314e4677983ecdb1ab785da2023811; size=1.1M
wgEncodeCshlLongRnaSeqImr90CellPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6391; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=40da3fcb1ecd856f83e6442462f83d66; size=1.9M
wgEncodeCshlLongRnaSeqImr90CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6074; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapJunctions; type=bedRnaElements; md5sum=4b2b82cf77267849752a2d1443e4a5d0; size=15M
wgEncodeCshlLongRnaSeqImr90CellPapMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapMinusRep1; type=bigWig; md5sum=87f1004ddf6986676973140ca337965d; size=148M
wgEncodeCshlLongRnaSeqImr90CellPapMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapMinusRep2; type=bigWig; md5sum=8bc83d18da04185ab2c2e5a0f5a98043; size=107M
wgEncodeCshlLongRnaSeqImr90CellPapPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapPlusRep1; type=bigWig; md5sum=7c6653928e09c95dceabeba050483cfd; size=152M
wgEncodeCshlLongRnaSeqImr90CellPapPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapPlusRep2; type=bigWig; md5sum=d5717c12ff57b3260c348c2355b81df8; size=110M
wgEncodeCshlLongRnaSeqImr90CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7666; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; labProtocolId=045WC+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=4d6007689937335d781410e3a15ce42b; size=431K
wgEncodeCshlLongRnaSeqImr90CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7679; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; labProtocolId=046WC+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=1218df668d3dcbcdfd5e26b41e825168; size=431K
wgEncodeCshlLongRnaSeqImr90CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=7c6f167e4bd110681d6f6b80e01ec9c5; size=326M
wgEncodeCshlLongRnaSeqImr90CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=f7784c4a13a4bf9a18f2db9f63b71d2d; size=172M
wgEncodeCshlLongRnaSeqImr90CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7431; geoSampleAccession=GSM981249; labExpId=LID45017,LID45016; bioRep=046WC,045WC; labProtocolId=046WC+,045WC+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=65de47738dacd4c352729511b278a316; size=1.6M
wgEncodeCshlLongRnaSeqImr90CellPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6391; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapTranscriptGencV10; type=gtf; md5sum=b0d8ccfbef53da5eb46be55c5ab207b4; size=5.1M
wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1; type=bam; md5sum=5f3b458260d9917ee07f287f561fbacf; size=18G
wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1; type=bai; md5sum=904db66b92aaeaecb709e8fb626cf719; size=8.7M
wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2; type=bam; md5sum=c14f95ccd2c7e421725247d9c3bf9768; size=16G
wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2; type=bai; md5sum=04ff8327f2fed5ab3eb193e5b55eb1d9; size=8.5M
wgEncodeCshlLongRnaSeqImr90CellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6021; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalContigs; type=bedRnaElements; md5sum=2e5fcd92c68937369d89d0b3e51cd7bb; size=32M
wgEncodeCshlLongRnaSeqImr90CellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6935; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=3278ff6e4ab786fa726d1e77039931bf; size=14M
wgEncodeCshlLongRnaSeqImr90CellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6367; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=96126de2bac01eaa1839c77de2103bad; size=20M
wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=47fc17ab6a3ac42d99ce6d3c264085c9; size=12G
wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3a9c12fc030d937999fa2456cdfd0c69; size=9.8G
wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=194ec458645a9e85264143d9d37de5db; size=12G
wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=339ce5757850165094e64cd90c7912b1; size=9.7G
wgEncodeCshlLongRnaSeqImr90CellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7405; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labProtocolId=045WCt,046WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=af0e3f708da0e50a92808f9515b9b75f; size=2.7M
wgEncodeCshlLongRnaSeqImr90CellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6367; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=e770b99765d03dd6ed462835984ccf09; size=1.9M
wgEncodeCshlLongRnaSeqImr90CellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6058; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalJunctions; type=bedRnaElements; md5sum=9cce1fe5fa6cfb63fd205c59861f9904; size=14M
wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep1; type=bigWig; md5sum=d981e3b2d2672f4393ab38b2416ef2f5; size=234M
wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep2; type=bigWig; md5sum=006cceade236d974245d50329883886b; size=241M
wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep1; type=bigWig; md5sum=49c670192adab0eb6890fe1f3d98f3f8; size=239M
wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep2; type=bigWig; md5sum=fd6b26711ef4a27ce5e065e10a447f47; size=246M
wgEncodeCshlLongRnaSeqImr90CellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7675; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; labProtocolId=045WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=47a47c59336bc42634a84382b95937a3; size=342K
wgEncodeCshlLongRnaSeqImr90CellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7669; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; labProtocolId=046WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=b653966efd80b68a4d49fb8aa5a3e1c1; size=341K
wgEncodeCshlLongRnaSeqImr90CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=db7410849e8d797003204d43bfb85f3e; size=137M
wgEncodeCshlLongRnaSeqImr90CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=288f3c6d7e40224565b01c9eae1b784e; size=116M
wgEncodeCshlLongRnaSeqImr90CellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7405; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labProtocolId=045WCt,046WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=f23de19bda9edd1020b8a2a31a371ef4; size=3.2M
wgEncodeCshlLongRnaSeqImr90CellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6367; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalTranscriptGencV10; type=gtf; md5sum=93c1fcb55ad549e6fa509db1687cd577; size=5.0M
wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1; type=bam; md5sum=f15f6a6f113be1daf1cdd3ced8147147; size=13G
wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1; type=bai; md5sum=a27bfc74fa0d2a57383ee356ec5c3888; size=5.9M
wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2; type=bam; md5sum=0f7febc2c41ed69593728e64ce0d1a1b; size=18G
wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2; type=bai; md5sum=2972057bb00a575c3417353052dd3679; size=7.2M
wgEncodeCshlLongRnaSeqImr90CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6043; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapContigs; type=bedRnaElements; md5sum=ac993a0271408cee8cf6a7f467811ab6; size=8.0M
wgEncodeCshlLongRnaSeqImr90CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6953; geoSampleAccession=GSM981244; labExpId=LID45612,LID45611; bioRep=046C,045C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=6b50704b05f9b91473c8160d299a20b9; size=14M
wgEncodeCshlLongRnaSeqImr90CytosolPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6390; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=22f55a90de05097d70d0e0e3521cc83c; size=20M
wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=c4f66de3ca4f8b4efcbfb1bf7c3316f4; size=9.3G
wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=ccdb8e60a3fc36abd01d94f66dbc6602; size=13G
wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=4dd1bfeab03778dcacefaa7ea6927a24; size=9.1G
wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=54ebc58eabcbca63681ab7b39b9f3b85; size=12G
wgEncodeCshlLongRnaSeqImr90CytosolPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7414; geoSampleAccession=GSM981244; labExpId=LID45612,LID45611; bioRep=046C,045C; labProtocolId=046N+,045N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=373fca0175696e9e9c6dec55095693c3; size=992K
wgEncodeCshlLongRnaSeqImr90CytosolPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6390; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=161b8abc319343e0737448aef9a3f90c; size=1.9M
wgEncodeCshlLongRnaSeqImr90CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6072; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapJunctions; type=bedRnaElements; md5sum=4142f66b77901f2adb556e687e2240a3; size=9.4M
wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep1; type=bigWig; md5sum=1f1b7be359feb2b20da4b15f5a9b12df; size=55M
wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep2; type=bigWig; md5sum=85da51a3c14bdb7e9afd957a4212e219; size=89M
wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep1; type=bigWig; md5sum=8b9fc36164124932c3e0a4f266f18e01; size=56M
wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep2; type=bigWig; md5sum=edb5d300a91a0e8724f4eafb92ecce4e; size=92M
wgEncodeCshlLongRnaSeqImr90CytosolPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7664; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; labProtocolId=045N+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=8709a657b42a40b73b7f90ef091102e1; size=310K
wgEncodeCshlLongRnaSeqImr90CytosolPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7668; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; labProtocolId=046N+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=5344f293544ec7d12a50edbee2fce3e2; size=340K
wgEncodeCshlLongRnaSeqImr90CytosolPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=a707f1e241a101ff15a3520ed55ced83; size=391M
wgEncodeCshlLongRnaSeqImr90CytosolPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=61d9f4115784f1569306eb4c1295f7d3; size=274M
wgEncodeCshlLongRnaSeqImr90CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7414; geoSampleAccession=GSM981244; labExpId=LID45612,LID45611; bioRep=046C,045C; labProtocolId=046N+,045N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=ee5efe02b4d5032f810233d76e9db5cc; size=1.4M
wgEncodeCshlLongRnaSeqImr90CytosolPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6390; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapTranscriptGencV10; type=gtf; md5sum=3c54273c6f195ef11da74ff39d07d5b7; size=4.9M
wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1; type=bam; md5sum=16c147703681e7a58ecf08c9ef70793c; size=22G
wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1; type=bai; md5sum=539428010642f55143e50a05c7470ed5; size=8.4M
wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2; type=bam; md5sum=d4dcc7a67bda49ee4be0dbc4a22dc6ac; size=23G
wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2; type=bai; md5sum=c34b154a2a80a77e714023ee963d144f; size=9.5M
wgEncodeCshlLongRnaSeqImr90NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6034; geoSampleAccession=GSM981248; labExpId=LID45635,LID45613; bioRep=046N,045N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapContigs; type=bedRnaElements; md5sum=363b333b9bf211b11ebcb7970c607531; size=25M
wgEncodeCshlLongRnaSeqImr90NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6969; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=25e4544336e38057df51b2e15914cba2; size=21M
wgEncodeCshlLongRnaSeqImr90NucleusPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6384; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=f4305e85bb7bc1004140c3199cf5a135; size=21M
wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=36ee2393a0e162a1a74dd70a08a88238; size=15G
wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=f5b8879d659ba8f87ebd0a33e0fde16f; size=15G
wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3e28a99b02c9ffdd58a16ca3851ed0e2; size=15G
wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=db91fef4a9579093d6caef667d0e368c; size=15G
wgEncodeCshlLongRnaSeqImr90NucleusPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7423; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labProtocolId=045C+,046C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=ecbffa0e373889a059f22c5ab8f7014c; size=3.4M
wgEncodeCshlLongRnaSeqImr90NucleusPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6384; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=497f6fbc4e9ae5619883093ac1a180f5; size=1.9M
wgEncodeCshlLongRnaSeqImr90NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6054; geoSampleAccession=GSM981248; labExpId=LID45635,LID45613; bioRep=046N,045N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapJunctions; type=bedRnaElements; md5sum=f888848a2297b91615a6cd995ad90674; size=21M
wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep1; type=bigWig; md5sum=d3da319e8a5bdca58c8a02840aea8c08; size=201M
wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep2; type=bigWig; md5sum=c0b5302e9413172e4379a44de90267ff; size=314M
wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep1; type=bigWig; md5sum=9f79d6dac6c64f87a6755fab87d37775; size=209M
wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep2; type=bigWig; md5sum=beadc0ceaedaf92cbf073c5d0ab9c6e0; size=324M
wgEncodeCshlLongRnaSeqImr90NucleusPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7662; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; labProtocolId=045C+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=9d7949898014bdd68fde8fa84710f40e; size=356K
wgEncodeCshlLongRnaSeqImr90NucleusPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7663; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; labProtocolId=046C+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=c65e4a075dd89b8c47fa0a9338f4ed11; size=349K
wgEncodeCshlLongRnaSeqImr90NucleusPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=7b024c8a1ec7bd611746d9b852235283; size=249M
wgEncodeCshlLongRnaSeqImr90NucleusPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=332a4e2c8eac31635d173780fc0d69ac; size=354M
wgEncodeCshlLongRnaSeqImr90NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7423; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labProtocolId=045C+,046C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=89e3f276fd3170e58ca5e8b6f734fb7c; size=4.0M
wgEncodeCshlLongRnaSeqImr90NucleusPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6384; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapTranscriptGencV10; type=gtf; md5sum=e8b2a5a3b37a71db7b5c9fd301944079; size=5.1M
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1; type=bam; md5sum=de9dcd8e94d9325d7d0b830a3c572b40; size=12G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1; type=bai; md5sum=f5db64937e061d7636be066b1c781251; size=7.6M
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2; type=bam; md5sum=e9a9d665dc638ddddce27899426c75ab; size=12G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2; type=bai; md5sum=13ad0a1ddac7fc309e3ac012fa1487c2; size=7.5M
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f068c9484d61b4fb7a16d4b6fa37f4e0; size=7.0G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4de01ee131eee819ae99ec2d3ca0cb28; size=6.9G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1182368ba1ff694157fbbac58d212184; size=7.3G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=534e4ca9c746e38d37dc5e0623fd19fc; size=7.3G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=f4185d080d54c90b447b8f0cabb7e95f; size=1017M
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=813312189bdf599e938f767592f3a3e3; size=953M
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=ff79a03f694fda15a394e9ae5526fe1f; size=1.1G
wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=31774ba15a12315bcf427c293b97403c; size=970M
wgEncodeCshlLongRnaSeqK562CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPamContigs; type=bedRnaElements; md5sum=afc3af783d345d2157f78061590fc883; size=14M
wgEncodeCshlLongRnaSeqK562CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7012; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=519f79300fecee2d2ef17f9e65ef8828; size=11M
wgEncodeCshlLongRnaSeqK562CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4588; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=00b0436f6e9004f8728081a0f72ec3fe; size=18M
wgEncodeCshlLongRnaSeqK562CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=061d4a3ff7ee50f19bcd803babb97d86; size=5.0M
wgEncodeCshlLongRnaSeqK562CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7481; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labProtocolId=001WC-,002WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4fa599871a4f8a214ad8c1764d07c9f4; size=5.5M
wgEncodeCshlLongRnaSeqK562CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4588; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=20328ca80da3f656cb46ab43af433bf4; size=2.0M
wgEncodeCshlLongRnaSeqK562CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPamJunctions; type=bedRnaElements; md5sum=b0e56dea806ba187617df2be00ac1171; size=8.1M
wgEncodeCshlLongRnaSeqK562CellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d6bc18fded9d70795be10330f7139c24; size=439K
wgEncodeCshlLongRnaSeqK562CellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8a52d7738c849c154711210fa20b6495; size=432K
wgEncodeCshlLongRnaSeqK562CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4227; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6923ed2e03bd42279fb9e410390b6447; size=173M
wgEncodeCshlLongRnaSeqK562CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4294; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=def12f50d05b1bc1837f0361db5d954a; size=168M
wgEncodeCshlLongRnaSeqK562CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8befdd4138a675ac39ee5c4683ccabca; size=24M
wgEncodeCshlLongRnaSeqK562CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7481; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labProtocolId=001WC-,002WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=34449b5fc96b8f80e48676484bec8e84; size=6.1M
wgEncodeCshlLongRnaSeqK562CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4588; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPamTranscriptGencV7; type=gtf; md5sum=757aad7d58f9cbd57b8c77ce3ed92257; size=4.8M
wgEncodeCshlLongRnaSeqK562CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep1; type=bam; md5sum=fe973d06b92dd8419a1264dff247b696; size=13G
wgEncodeCshlLongRnaSeqK562CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep1; type=bai; md5sum=4d4b6abfa4ff6f0f689caa43ca8f6fc1; size=7.1M
wgEncodeCshlLongRnaSeqK562CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep2; type=bam; md5sum=1004cf059b880cbd35ccda6a8925a808; size=14G
wgEncodeCshlLongRnaSeqK562CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep2; type=bai; md5sum=a4f4f49e92ccae73009a6b7028ed2deb; size=7.3M
wgEncodeCshlLongRnaSeqK562CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapContigs; type=bedRnaElements; md5sum=09507a0239e560bb2a1e1f3fd3e7c9e5; size=11M
wgEncodeCshlLongRnaSeqK562CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6968; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=70ea3345eb938ae9bca7c07ef4e26933; size=6.8M
wgEncodeCshlLongRnaSeqK562CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4585; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=effb8cccb0191ac7ee7d2aeee5d57bd3; size=19M
wgEncodeCshlLongRnaSeqK562CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ea1cf09130e51296fc6fccc91ad4f4a8; size=8.0G
wgEncodeCshlLongRnaSeqK562CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d3d8734ce5213411d6b3e356a60f91f5; size=8.2G
wgEncodeCshlLongRnaSeqK562CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=712ddbedbc5f4335eec9d112e8ca4b23; size=8.2G
wgEncodeCshlLongRnaSeqK562CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=df05e88f24b16537d28e4280be6e5529; size=8.4G
wgEncodeCshlLongRnaSeqK562CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=05ea8c47f9e610821014078b6a37e4e7; size=1.8M
wgEncodeCshlLongRnaSeqK562CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7478; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labProtocolId=001WC+,002WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=190aea8b2981b9e50691ae63670865fb; size=2.0M
wgEncodeCshlLongRnaSeqK562CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4585; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=82e1afc6821ed602d50e883c31579f8a; size=2.0M
wgEncodeCshlLongRnaSeqK562CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapJunctions; type=bedRnaElements; md5sum=71a59b018c25078e8affdda5d85ea2b8; size=9.6M
wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep1; type=bigWig; md5sum=608d18e23e9a82e5739cf6889412e940; size=676M
wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep2; type=bigWig; md5sum=66d076e7a7cf042682825662c2c658bc; size=707M
wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep1; type=bigWig; md5sum=25cd92ac00e069e1d64ea9761637ae18; size=683M
wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep2; type=bigWig; md5sum=b09bf74c631f5c9c4baf82bda9dd7eb2; size=719M
wgEncodeCshlLongRnaSeqK562CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1ae9a1bfc768a975d4a0da6566249eda; size=639K
wgEncodeCshlLongRnaSeqK562CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=decbce46df60abb7902816e97c59b9f8; size=1.4M
wgEncodeCshlLongRnaSeqK562CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4273; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d893f1329f0fc154bfb8029d57639139; size=686M
wgEncodeCshlLongRnaSeqK562CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4230; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2563272d75254ff1c410476f46788310; size=396M
wgEncodeCshlLongRnaSeqK562CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5ec81c2aa41abd9de2f2b0502cfb032f; size=15M
wgEncodeCshlLongRnaSeqK562CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7478; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labProtocolId=001WC+,002WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5fddcae2176bd5a7d5301e6bc9412d3; size=2.4M
wgEncodeCshlLongRnaSeqK562CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4585; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapTranscriptGencV7; type=gtf; md5sum=03b417bc2b50aa043c6ef664fc062cca; size=5.0M
wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1; type=bam; md5sum=6240c7fb95a9a460acb47f9d50aab122; size=3.6G
wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1; type=bai; md5sum=8c3a1323da706273fc342ff9eb71a971; size=6.3M
wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2; type=bam; md5sum=e9b5a54cab5b51c11e1996d984fc565c; size=2.8G
wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2; type=bai; md5sum=296b9020125f71f4d0acac97238decc9; size=5.8M
wgEncodeCshlLongRnaSeqK562CellTotalFastqRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840136; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=95b6b0776dcaaa3898af091018c28146; size=8.0G
wgEncodeCshlLongRnaSeqK562CellTotalFastqRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840136; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=bfed41799fffb55a938c35bfa39e4c60; size=6.0G
wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep1; type=bigWig; md5sum=0bbb121f4ff9cfd78cc667d844def78b; size=266M
wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep2; type=bigWig; md5sum=0a2a36f2d51c9acf19c044bf836a24c6; size=217M
wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep1; type=bigWig; md5sum=a500212157a56feeeb34006c2958aa8a; size=270M
wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep2; type=bigWig; md5sum=917dcac982a5b25da460327ad6b8180b; size=221M
wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3; type=bam; md5sum=eea03a9edcb0f9744974dd2cbd8702c9; size=16G
wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3; type=bai; md5sum=86401a886eb232f521ccf6440d3f1e2d; size=8.0M
wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4; type=bam; md5sum=92e4e8bbf6190b9c0521f83d70ac7f45; size=15G
wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4; type=bai; md5sum=78a768bf7af375457be8e5c8bd53b13b; size=7.9M
wgEncodeCshlLongRnaSeqK562ChromatinTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalContigs; type=bedRnaElements; md5sum=0c0ac54270a9212e2be8fdaf7eacce33; size=11M
wgEncodeCshlLongRnaSeqK562ChromatinTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6941; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=915f2cc414757dfc5849385d992735a3; size=9.1M
wgEncodeCshlLongRnaSeqK562ChromatinTotalExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4551; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b73eb8611badbf5b8ed37b1fb58763e8; size=19M
wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cdca582a8249195214cd51c2dde2ae74; size=8.9G
wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cf9431dabe0b8e6ee01f112a540509e0; size=8.4G
wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f9f9137604a1a09d72c9e64259f2a4c6; size=9.3G
wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0ceb1b86f0bade4cc2024f2a1c00f754; size=8.8G
wgEncodeCshlLongRnaSeqK562ChromatinTotalGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=af403e415ccd72853152c0261c22ab12; size=4.5M
wgEncodeCshlLongRnaSeqK562ChromatinTotalGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7445; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labProtocolId=025CHt,026CHt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b3814bb05ebeb83cb4eb84b49eba4714; size=5.9M
wgEncodeCshlLongRnaSeqK562ChromatinTotalGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4551; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4c424d8ace108af578f56a8660face5d; size=2.0M
wgEncodeCshlLongRnaSeqK562ChromatinTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalJunctions; type=bedRnaElements; md5sum=bee65b2dd8cb1699805bb2c4e422e4bf; size=13M
wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep3; type=bigWig; md5sum=a7419c20d86ef2f44e929ecf2cec9cf3; size=1.4G
wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep4; type=bigWig; md5sum=f50eef37accf83ecf2f9b2ba89ed3ad4; size=1.2G
wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep3; type=bigWig; md5sum=03cd68e30fd135a54f1af1a785a647cc; size=1.4G
wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep4; type=bigWig; md5sum=866c2b710a6ce5b57e56f4bdc3b65c22; size=1.3G
wgEncodeCshlLongRnaSeqK562ChromatinTotalProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7667; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; labProtocolId=025CHt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=6f7d11d8edd26eea42794e8350dbb26f; size=340K
wgEncodeCshlLongRnaSeqK562ChromatinTotalProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7677; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; labProtocolId=026CHt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a000e967d8592babd6dd4bb87a4f7ea9; size=338K
wgEncodeCshlLongRnaSeqK562ChromatinTotalSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4189; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=89f02cd9a135fbf4e74ac5ab950a1283; size=335M
wgEncodeCshlLongRnaSeqK562ChromatinTotalSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4236; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=7b6c493a200b0ed6eb670d33c33e4b45; size=415M
wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a0b363c7a5e894e1f6b6cc500189b807; size=25M
wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7445; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labProtocolId=025CHt,026CHt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d5cb183f327972bcbb45cace95aa4de5; size=6.5M
wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4551; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptGencV7; type=gtf; md5sum=83fc6243af9f489990608099bddfe90b; size=4.8M
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1; type=bam; md5sum=5fdb7612b76789744089f3cfc15ad1da; size=6.8G
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1; type=bai; md5sum=fa501c1ed029cf6e394884cc2c0bc62a; size=4.4M
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2; type=bam; md5sum=1cc9f24a47d51f908e28b9dbd150d8c6; size=10G
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2; type=bai; md5sum=8d9aa5a6af495caa420e736ffdeec8c3; size=4.8M
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=28f21b022be8811076c8ebb0da324560; size=4.1G
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=657cb949063fa4781f0e2c7d773e6c5e; size=5.9G
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f2cd760ada90478269daabfc3b0fba5a; size=4.4G
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9be3f176e656eb5ab7bb39d63c084345; size=6.2G
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=5c8a7bc406369cf6dba1a3288b2a6e5d; size=24M
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=7c9cdf5b51f7ec412bd1d6114338d644; size=41M
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=7fa29032cb023ea63f748a77ed5fba26; size=24M
wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=f310918158c99287dd2f3a2503ad4a18; size=42M
wgEncodeCshlLongRnaSeqK562CytosolPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPamContigs; type=bedRnaElements; md5sum=44f1b478649c54aa67ebe6905c615675; size=5.0M
wgEncodeCshlLongRnaSeqK562CytosolPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6966; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3691a18511d55615175ffa294e375690; size=5.1M
wgEncodeCshlLongRnaSeqK562CytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4579; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=baa74efe6477bfcfb76065ff7ba57c9c; size=17M
wgEncodeCshlLongRnaSeqK562CytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1aebfa58994e7036409c8fca5cbda608; size=609K
wgEncodeCshlLongRnaSeqK562CytosolPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7474; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labProtocolId=001C-,002C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=7f1abc6caac196d4af7224943bb3968b; size=818K
wgEncodeCshlLongRnaSeqK562CytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4579; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=edd7a515109a2480d99572defb95a24c; size=2.0M
wgEncodeCshlLongRnaSeqK562CytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPamJunctions; type=bedRnaElements; md5sum=b64cb6e548b6595f3d3af5d5826a0189; size=2.6M
wgEncodeCshlLongRnaSeqK562CytosolPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a6136a9b9030d356f28dcd3cf166efc8; size=495K
wgEncodeCshlLongRnaSeqK562CytosolPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=375364f75aef4768e4314cd5616e6bae; size=501K
wgEncodeCshlLongRnaSeqK562CytosolPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4197; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8a97a087c0cca258d192d4de38657b13; size=159M
wgEncodeCshlLongRnaSeqK562CytosolPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4279; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=678a27898eb074bc540f2367238d60b4; size=222M
wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=29bcc23d758e138dc7ade09be7c05cbe; size=5.0M
wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7474; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labProtocolId=001C-,002C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=873eacbc8a1c821d647052d3f330d27c; size=1.2M
wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4579; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptGencV7; type=gtf; md5sum=381595faa07c8e066d7093345cb2e9c9; size=4.5M
wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1; type=bam; md5sum=970d0822fe075949f8f822f20ab57b78; size=13G
wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1; type=bai; md5sum=40116eb4022a6ca0379f98911b8514de; size=6.6M
wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2; type=bam; md5sum=d9959d0dfaa18f3e37539e9f6be7d47e; size=8.4G
wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2; type=bai; md5sum=249404a3674632d966ae511c0ccbc9a7; size=5.8M
wgEncodeCshlLongRnaSeqK562CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapContigs; type=bedRnaElements; md5sum=dfa8e74cfa85a2018608ad51a5bf1610; size=8.2M
wgEncodeCshlLongRnaSeqK562CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6960; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9fce4c6abe2bb670929952b7ddbcbde2; size=5.6M
wgEncodeCshlLongRnaSeqK562CytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4572; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=84adc3ce8a502d928d643c476eb9a3ce; size=19M
wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=521ed7d0b3b6e8b8d5a0a177d13be8ec; size=8.3G
wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7d6fb0723fb5c2b48e40c6312fc9134e; size=5.5G
wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7b44779e825b569ee9dd4e6c8e80f1cb; size=8.5G
wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=14d9037323fca5c9627600d0db14cd86; size=5.7G
wgEncodeCshlLongRnaSeqK562CytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=09effa3d66b873a466337c45cc4c9193; size=1.1M
wgEncodeCshlLongRnaSeqK562CytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7466; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labProtocolId=001C+,002C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e6f899f19873837e6a4509bfa63fc45f; size=980K
wgEncodeCshlLongRnaSeqK562CytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4572; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bba91af79382b4d10d17421266239e06; size=2.0M
wgEncodeCshlLongRnaSeqK562CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapJunctions; type=bedRnaElements; md5sum=575304133809225281f6fdd1dd506a75; size=7.7M
wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep1; type=bigWig; md5sum=a46acf068ded034b2f836975fed93793; size=381M
wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep2; type=bigWig; md5sum=0ceeee2459bd082f7165ddea60f06499; size=247M
wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep1; type=bigWig; md5sum=f14f05dcc6313dd263631c44a9d808a8; size=387M
wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep2; type=bigWig; md5sum=1f61a41057bbeba705f2495cc9428397; size=251M
wgEncodeCshlLongRnaSeqK562CytosolPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=88673b25505750c6a2866b1d4cd0f048; size=1.1M
wgEncodeCshlLongRnaSeqK562CytosolPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e3d1b701d54f97f71412900d95e49b83; size=1.1M
wgEncodeCshlLongRnaSeqK562CytosolPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4295; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=777d30422e4dc485203c79933231195d; size=76M
wgEncodeCshlLongRnaSeqK562CytosolPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4192; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9875675a92b512a38571857561a606c7; size=33M
wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0602fee6597fd452f84ac85872ed8da0; size=11M
wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7466; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labProtocolId=001C+,002C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6f54c982899bd8f9c462c2ad2846652a; size=1.4M
wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4572; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptGencV7; type=gtf; md5sum=04221f45fb3bb43afd1148b0dc7fa63a; size=4.9M
wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3; type=bam; md5sum=117b6ad516aa9635af09df5759e4cf30; size=9.6G
wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3; type=bai; md5sum=fd319c0884b9b23511923d23d9c52f69; size=7.0M
wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4; type=bam; md5sum=75d970e4409c81da2917a66c909079a3; size=11G
wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4; type=bai; md5sum=8605961b43d41933424140a831d9c773; size=7.1M
wgEncodeCshlLongRnaSeqK562NucleolusTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalContigs; type=bedRnaElements; md5sum=078ed6ada60b45231c5040f8966c3d25; size=13M
wgEncodeCshlLongRnaSeqK562NucleolusTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6989; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ce93d0a648d643269763f92cf5c09adb; size=8.6M
wgEncodeCshlLongRnaSeqK562NucleolusTotalExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4546; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ee4f5fe73aceec1320500c4020ba6768; size=18M
wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=022852bb433ad8f4000b042be127b777; size=6.0G
wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8e4e56af1cdb1ca43e82ed70ac1cf29b; size=5.9G
wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=77d110d985f402d285083cf016046f10; size=6.6G
wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4de2378c4f16d365e41ace69b926d33c; size=7.2G
wgEncodeCshlLongRnaSeqK562NucleolusTotalGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9f8e3cfc4b7f49576d62e0a01fe80dfe; size=6.0M
wgEncodeCshlLongRnaSeqK562NucleolusTotalGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7440; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labProtocolId=025NLt,026NLt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6217009f67a0ca975903a7b15c4f1768; size=5.2M
wgEncodeCshlLongRnaSeqK562NucleolusTotalGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4546; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=02d2c8bcfa5a7f95c06a44d0756d8c65; size=2.0M
wgEncodeCshlLongRnaSeqK562NucleolusTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalJunctions; type=bedRnaElements; md5sum=48d7191a1b5922ab234272cbbf1acf43; size=7.7M
wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep3; type=bigWig; md5sum=578797d0d5ae29c0f13544c01c5ea89f; size=1.3G
wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep4; type=bigWig; md5sum=8fcfcf1fa46a40e78698c3a03004d5bc; size=926M
wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep3; type=bigWig; md5sum=6d9e6421bfa8e4a84b0b4f33d107494d; size=1.3G
wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep4; type=bigWig; md5sum=8b5985acba736f586ed8c44fc8141072; size=949M
wgEncodeCshlLongRnaSeqK562NucleolusTotalProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7670; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; labProtocolId=025NLt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a654770004dc293e7e888dcdc41a8fb4; size=325K
wgEncodeCshlLongRnaSeqK562NucleolusTotalProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7671; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; labProtocolId=026NLt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bd406075c9d5821a880f23928560221a; size=339K
wgEncodeCshlLongRnaSeqK562NucleolusTotalSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4285; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9a8554644318c8f3df3677a2507c563a; size=386M
wgEncodeCshlLongRnaSeqK562NucleolusTotalSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4228; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4faf79db0bd8301b6fdd70f7b7cf4064; size=396M
wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e1d68998d28cbffd054503e46718a065; size=33M
wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7440; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labProtocolId=025NLt,026NLt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b995a504e7959d5f6515a406dfd60da; size=5.8M
wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4546; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptGencV7; type=gtf; md5sum=28155f833fad8ae833a12ef89ad3cace; size=4.7M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3; type=bam; md5sum=8f393acaeef9a9f75c793947242e34d5; size=14G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3; type=bai; md5sum=9246535b9f3da6ead533772816ba2ba2; size=7.7M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4; type=bam; md5sum=d942ee1a252d3141a6ddda357414560b; size=15G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4; type=bai; md5sum=aee06e459ea100cc1f16be858995fcaf; size=7.7M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalContigs; type=bedRnaElements; md5sum=57f1029e1e79656419812f779ecb5fad; size=12M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6934; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4d8f1c1268a31af54b7087deaf04fadd; size=9.6M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4545; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9758deef97da65466f7d6c73663d840d; size=18M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=76a2de381538c38e4bd608f33a5c74ec; size=8.3G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8797659e1d7cd45c7c9a5066dfbe6fcc; size=8.3G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9685688c9a0c31fea47d14dc20394365; size=8.9G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2957a3859912427acf78bd1e2d9ccaad; size=8.5G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9ff02541066ec968e5e4f38a325fc6e8; size=5.5M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7439; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labProtocolId=025NPt,026NPt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=60daa7f6cf2f5faf8cb22f53a87bea90; size=6.6M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4545; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=32f45a84e431a5a984cb1d52bab5fb2c; size=2.0M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalJunctions; type=bedRnaElements; md5sum=85b2bc1d2b1bf98775bb7266c577c1e8; size=8.9M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep3; type=bigWig; md5sum=c0b672e2d8fa5149b8522d1dc592c783; size=1.3G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep4; type=bigWig; md5sum=7592e06c19aa3382fe784e2d2a32d8f5; size=1.3G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep3; type=bigWig; md5sum=f4e5079ad9f9382928af73ba0306bf26; size=1.3G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep4; type=bigWig; md5sum=62f7ad1b84ad6e0fa390745c73081096; size=1.4G
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7676; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; labProtocolId=025NPt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=aaf482c1c3cccf77190dd1b51aafb00a; size=336K
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7683; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; labProtocolId=026NPt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=6aba51fd2fdb882e18106324619cdae3; size=339K
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4291; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4809e0d902b3c5b7441f6d05e5b75e7d; size=443M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4297; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d77c60ad2f4ab9e38e479879152e81aa; size=448M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=26b761969212708830aa8e6ce203aa5a; size=30M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7439; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labProtocolId=025NPt,026NPt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2223d6122fc262407e81a9e8566e04b9; size=7.2M
wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4545; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptGencV7; type=gtf; md5sum=52a6195376219204e07407fd9041e16f; size=4.7M
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1; type=bam; md5sum=ae65b78648acd6900d466c33931c918b; size=12G
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1; type=bai; md5sum=b2a788aec352dc1d4cab0a80691afbbb; size=7.2M
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2; type=bam; md5sum=2f263aaab224f88bdd96e9799b04ac97; size=9.3G
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2; type=bai; md5sum=b32e76b21e25d2fa290cab2ce6a9a474; size=7.0M
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bf027732b157669c01ecfffc2c4bfe6e; size=7.1G
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a52942f5556ddf478c1af1860105e016; size=5.6G
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=991a7413e437766fe8644d4743a7f564; size=7.1G
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a71c761ec88f2d75745ea53019c3ca18; size=5.6G
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=09962bc212f832284c6a85df39563b9b; size=309M
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=387441ddd0a59e591d1faee16124afa9; size=292M
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=9a36379a376f1d79debaa9888c823b18; size=312M
wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=2688cb8e457fb2e381cfb033cad181cf; size=292M
wgEncodeCshlLongRnaSeqK562NucleusPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPamContigs; type=bedRnaElements; md5sum=a0513047f6251f6fda0f2f8433fb99b8; size=11M
wgEncodeCshlLongRnaSeqK562NucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6986; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=764639b21f3c3e5a08336684c102b565; size=11M
wgEncodeCshlLongRnaSeqK562NucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4541; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2d480fe3c3bf3cc5e81e25589d18b833; size=18M
wgEncodeCshlLongRnaSeqK562NucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4cbe72c53e45365e59b23684b76d27bb; size=5.3M
wgEncodeCshlLongRnaSeqK562NucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7436; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labProtocolId=001N-,002N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=17a2920851c9b15e7396ca9b1aee7925; size=6.8M
wgEncodeCshlLongRnaSeqK562NucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4541; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c60c52c99bebec686a686d002e9ff0e1; size=2.0M
wgEncodeCshlLongRnaSeqK562NucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPamJunctions; type=bedRnaElements; md5sum=55e4dd1132180a9e7937455e508367a0; size=6.3M
wgEncodeCshlLongRnaSeqK562NucleusPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fe0ce2e7da624df7d95022d1b7924dab; size=424K
wgEncodeCshlLongRnaSeqK562NucleusPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d17734abfb1bdeeb88cf6b316c78e09d; size=429K
wgEncodeCshlLongRnaSeqK562NucleusPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4259; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b78295caf280dd7279f32f63b2405657; size=228M
wgEncodeCshlLongRnaSeqK562NucleusPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4233; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5a06e25ba4ea509c584253018d4550f5; size=172M
wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0fdd6140ca14bf83ded0f8d462c65fd; size=26M
wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7436; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labProtocolId=001N-,002N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=149166534483f9afc30b479c5dd0cb74; size=7.4M
wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4541; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptGencV7; type=gtf; md5sum=e8738c465c7470c490c41e036a32c1de; size=4.7M
wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1; type=bam; md5sum=c417d4cffd914d97550b9c465601b599; size=13G
wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1; type=bai; md5sum=372fc6807675cae972c86ff248457cce; size=7.7M
wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2; type=bam; md5sum=3dbc05fb17b6bcb1a752af403011aeeb; size=11G
wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2; type=bai; md5sum=7441ce01ce057a6fdeff0368ef290e4e; size=7.4M
wgEncodeCshlLongRnaSeqK562NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapContigs; type=bedRnaElements; md5sum=e16e5be18430e9021fa6bc6f787225bc; size=14M
wgEncodeCshlLongRnaSeqK562NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6993; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8d7f5b07002c3d217ddef353bb8736ca; size=8.9M
wgEncodeCshlLongRnaSeqK562NucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4555; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=683ade1043bc45600e4487928c6b3fae; size=19M
wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=39b4ac865e711198208d16dcc10e3f3b; size=7.8G
wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b255b5cfefe06d6fdd9455b20de68b2f; size=6.8G
wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8ebf0c0dea6fd3ba44914a198ef1e8ee; size=8.0G
wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2e18700d785a73d50b1d59049b4104b8; size=6.9G
wgEncodeCshlLongRnaSeqK562NucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5983fff3749886f9ac52dbd4ba9e8784; size=4.0M
wgEncodeCshlLongRnaSeqK562NucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7450; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labProtocolId=001N+,002N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bf2297d98a35ed90713753c2537d1a73; size=4.2M
wgEncodeCshlLongRnaSeqK562NucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4555; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=177af4742ae1844edc8a5ad120e0bde2; size=2.1M
wgEncodeCshlLongRnaSeqK562NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapJunctions; type=bedRnaElements; md5sum=3fd8c1316b2d65c0a5cadd051547c191; size=12M
wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep1; type=bigWig; md5sum=d6ec7a9e7fc0cdcc63c250e84f97cbf1; size=914M
wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep2; type=bigWig; md5sum=40c8405c7a7a907cab296276eb2b1587; size=864M
wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep1; type=bigWig; md5sum=7945a7774537bd46bbf582589905ba7c; size=935M
wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep2; type=bigWig; md5sum=e7eafdcc79402e8bfb4bef25962167a7; size=881M
wgEncodeCshlLongRnaSeqK562NucleusPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=64e3ff614965c03e5fe2e019a2c48dfc; size=624K
wgEncodeCshlLongRnaSeqK562NucleusPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=964347063bc77691bd9a47dcad820216; size=605K
wgEncodeCshlLongRnaSeqK562NucleusPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4203; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=0c1a7471c25dc400158e290e782d2346; size=135M
wgEncodeCshlLongRnaSeqK562NucleusPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4220; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=89d3545026436dd3e3108d3ee5d10c4c; size=144M
wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=695f62d057e4f4c23a849678c422ed5e; size=26M
wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7450; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labProtocolId=001N+,002N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a52ff5f5577f41c953d5478e23380e78; size=4.8M
wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4555; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptGencV7; type=gtf; md5sum=3f6a96f4e62747b2c06b9511bcd43186; size=5.0M
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1; type=bam; md5sum=4d55aa4b90bea5a9afa6aca6434bb0f2; size=7.6G
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1; type=bai; md5sum=7b2a5789cca302eee6a4a4276057bcde; size=6.8M
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2; type=bam; md5sum=c41dc0bea9c5b133d145b02a8962f775; size=6.3G
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2; type=bai; md5sum=6daf4830a69ff0e5df81032de0d0232f; size=6.4M
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=383fce00d27f255a4522952f85aee2aa; size=7.8G
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=70a9b62da2aeccb7ae4e99f876e7d103; size=7.0G
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e971cba2f5bb14e0e2c23f0d2ac78828; size=7.4G
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=842b3f20cd41dfbc516c706aa96d6aa2; size=6.8G
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=aa80c19ed93ef6f17256ed446a6e1d4a; size=393M
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=143f620a7b2bf7c5e348a07fe1160492; size=356M
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=694efcb5684cde7c88f8a26ea11cf844; size=413M
wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=53e50aab7ee470242b06cfbe58451fd9; size=377M
wgEncodeCshlLongRnaSeqMcf7CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPamContigs; type=bedRnaElements; md5sum=d3d81db9fa5d0d26d90ce0763122ac20; size=15M
wgEncodeCshlLongRnaSeqMcf7CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6964; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=804175c3be1979893716ec49a8aba93d; size=7.0M
wgEncodeCshlLongRnaSeqMcf7CellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4578; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2c6cbeac620e20b1a41aef4c81f8aee0; size=18M
wgEncodeCshlLongRnaSeqMcf7CellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1388ae48c3f6e5ba659db37585e3a291; size=1.6M
wgEncodeCshlLongRnaSeqMcf7CellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7473; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labProtocolId=015WC-,016WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=5956fc9e898c1dd4fab0e5553c9cd1a4; size=3.3M
wgEncodeCshlLongRnaSeqMcf7CellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4578; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=32a29bd31314f5ca424ee927c9a7e0e3; size=2.0M
wgEncodeCshlLongRnaSeqMcf7CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPamJunctions; type=bedRnaElements; md5sum=d3fa27bd4bfda71944b4e143aacfc944; size=4.6M
wgEncodeCshlLongRnaSeqMcf7CellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=9e22ad97b37261f654482a066a19a53b; size=432K
wgEncodeCshlLongRnaSeqMcf7CellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=162a4c770164f76d1e799dbc116e99a9; size=427K
wgEncodeCshlLongRnaSeqMcf7CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-05-07; dateUnrestricted=2012-02-07; subId=4056; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b70ce423111d13e546ffd55abeccfd99; size=839M
wgEncodeCshlLongRnaSeqMcf7CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4241; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b15b91b762c1b522876da95e411bd542; size=673M
wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4318b096974e48896cdb325122d60f55; size=7.3M
wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7473; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labProtocolId=015WC-,016WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d48599eeaf39b250701618467f33e42e; size=3.7M
wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4578; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptGencV7; type=gtf; md5sum=814c5b1f19daf517e0e6d5cf234ff8f9; size=4.6M
wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1; type=bam; md5sum=8a53cd697bbb102029f652c7e445fb6e; size=15G
wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1; type=bai; md5sum=f0d64145cff16bea967b5fbff9184731; size=7.6M
wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2; type=bam; md5sum=4f9e470396662b6f3be3ce8d3d488f9c; size=14G
wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2; type=bai; md5sum=eadef2f3c2b511b129467a8dd7d44007; size=7.4M
wgEncodeCshlLongRnaSeqMcf7CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapContigs; type=bedRnaElements; md5sum=b7035d8adebecc8397487f8943f4db06; size=19M
wgEncodeCshlLongRnaSeqMcf7CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7023; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=55c5a342079624346af201425b3ccdf9; size=7.3M
wgEncodeCshlLongRnaSeqMcf7CellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4600; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=87876ee9eef79b94531cc8c1b5bc0dd7; size=19M
wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bc1db55760a4db6f004e87adebaa1606; size=8.6G
wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f5269651b271c83911e2b3075b871a29; size=8.5G
wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7dfef579d8a5d75a762b9ece8266ac8e; size=8.9G
wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e98ddf6ae3870b00a4a5a986b8fc5dc5; size=8.7G
wgEncodeCshlLongRnaSeqMcf7CellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=931f65c019ee4819a46d3af87f550d3d; size=2.1M
wgEncodeCshlLongRnaSeqMcf7CellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7493; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=92eaa0906d7c1cd96be445b45324ee05; size=1.8M
wgEncodeCshlLongRnaSeqMcf7CellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4600; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7b670e1bac5cb360dddba66fb3def263; size=2.1M
wgEncodeCshlLongRnaSeqMcf7CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapJunctions; type=bedRnaElements; md5sum=0762d1f63e2d760f5bb0da30f25024f6; size=12M
wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep1; type=bigWig; md5sum=ec7ccbe7d927788addecd9d1be55b750; size=888M
wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep2; type=bigWig; md5sum=198402c259773888370bd42341dab917; size=825M
wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep1; type=bigWig; md5sum=93b15cecd03b633c1460bd842384563d; size=929M
wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep2; type=bigWig; md5sum=2d6773c082d915cd2ef0da0b787c3127; size=867M
wgEncodeCshlLongRnaSeqMcf7CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0b785e19448903c58d6397dc4d5d09dc; size=613K
wgEncodeCshlLongRnaSeqMcf7CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=66ab2116462c38dc31653f25cc7ca9b3; size=615K
wgEncodeCshlLongRnaSeqMcf7CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4248; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=98645c20ecc2efc23139de403939c698; size=154M
wgEncodeCshlLongRnaSeqMcf7CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4234; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=231fa72c487d9bcffb208a7138df4da6; size=239M
wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=87a6d60a7d6244fe658d16d775a99f40; size=19M
wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7493; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ce80749c4bcdab456a7feade6a19d25e; size=2.3M
wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4600; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptGencV7; type=gtf; md5sum=dff0e7daa3115b89d54456d1f975c53f; size=5.0M
wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3; type=bam; md5sum=844f41cc1487356459b19ab8271f6426; size=19G
wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3; type=bai; md5sum=cc388f507a8c33718d4d923c5155a448; size=8.7M
wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4; type=bam; md5sum=d94fea31ceba57837f4fb77701e7cb04; size=18G
wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4; type=bai; md5sum=81bdc4efb52a6d1ebffb9abd195310b1; size=8.3M
wgEncodeCshlLongRnaSeqMcf7CytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6019; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapContigs; type=bedRnaElements; md5sum=1a73d67426fd1d857d410f6ebafa6c60; size=15M
wgEncodeCshlLongRnaSeqMcf7CytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6931; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=c8e783ee69cdbaa56fc52b87b0f26ac3; size=21M
wgEncodeCshlLongRnaSeqMcf7CytosolPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6365; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=9bd0171a8c0164ede8dd1b741b22fe38; size=21M
wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=1e97c78cd3985dff0075dd18ffff7eae; size=13G
wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b8b64ab3978bec6a0c4bf79ca18c581b; size=12G
wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3833a52680c66e8b9de59ae2f42c0217; size=13G
wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=5ef6858ff60e3765c3560ca1259c8bc0; size=12G
wgEncodeCshlLongRnaSeqMcf7CytosolPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7403; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labProtocolId=089C+,090C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=7f2554036bab86b66867067462dba63a; size=1.4M
wgEncodeCshlLongRnaSeqMcf7CytosolPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6365; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=da3aeb1beaa8a8718e8a4ec2f0579b04; size=1.9M
wgEncodeCshlLongRnaSeqMcf7CytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6055; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapJunctions; type=bedRnaElements; md5sum=f944aa0562062872a3920e5524139e4f; size=17M
wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep3; type=bigWig; md5sum=ce8138d943c85b3606840553e8a86fd3; size=138M
wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep4; type=bigWig; md5sum=e7f57a94555191906d3459fafc43759c; size=137M
wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep3; type=bigWig; md5sum=6842409515f268c0df7dae91b099a1ee; size=141M
wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep4; type=bigWig; md5sum=dd247d57f160dcd946358c1a3449d81d; size=140M
wgEncodeCshlLongRnaSeqMcf7CytosolPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6907; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=511eb84fa263d1cf684e2c76c87cfc00; size=365K
wgEncodeCshlLongRnaSeqMcf7CytosolPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6905; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=fea255c5e4e0c188c5f5e8ea72905600; size=372K
wgEncodeCshlLongRnaSeqMcf7CytosolPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=173467631aa65d7a2c8b76d8c86642d3; size=753M
wgEncodeCshlLongRnaSeqMcf7CytosolPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=e988d204e92cedbb468fdfb6c11f49c8; size=709M
wgEncodeCshlLongRnaSeqMcf7CytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7403; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labProtocolId=089C+,090C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=adf9b020bb6e4ba5d8c514acb78d883e; size=1.9M
wgEncodeCshlLongRnaSeqMcf7CytosolPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6365; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapTranscriptGencV10; type=gtf; md5sum=849e99c1748bb95b10e452e884f951e5; size=5.2M
wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3; type=bam; md5sum=95d36be8fcdfa1d0e7c83b33d1482a92; size=18G
wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3; type=bai; md5sum=ce6274961f4117a0fb79e064f30ef237; size=9.3M
wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4; type=bam; md5sum=35af091369b811d6539ec05fb062131c; size=17G
wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4; type=bai; md5sum=c1d2a7699c6bc59329d509582fe7b4d9; size=8.9M
wgEncodeCshlLongRnaSeqMcf7NucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6018; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapContigs; type=bedRnaElements; md5sum=1235edb43055df24b7b2d65286aee189; size=36M
wgEncodeCshlLongRnaSeqMcf7NucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6954; geoSampleAccession=GSM981245; labExpId=LID46860,LID46859; bioRep=090N,089N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=91bdc831af8df014873798543aca2521; size=25M
wgEncodeCshlLongRnaSeqMcf7NucleusPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6364; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=8af15f0976b9a50a69b1b01001d9e72d; size=21M
wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b1c4c38a7b0a4fc61e117116e6d1820d; size=11G
wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=71dd60fe297361bad936a707ee3d6e28; size=11G
wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=01827929b1923f51b12053c1f0d514af; size=12G
wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=defabd118276ecefd853c8e338fca02e; size=11G
wgEncodeCshlLongRnaSeqMcf7NucleusPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7415; geoSampleAccession=GSM981245; labExpId=LID46860,LID46859; bioRep=090N,089N; labProtocolId=090N+,089N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=e894b47c48154a48d4f1ef8ee29fdb91; size=6.8M
wgEncodeCshlLongRnaSeqMcf7NucleusPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6364; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=026eb9ebd9ae84120719d7e76a3efe99; size=1.9M
wgEncodeCshlLongRnaSeqMcf7NucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6056; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapJunctions; type=bedRnaElements; md5sum=0f6e076fd874b3981c6773eaf9901ac1; size=18M
wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep3; type=bigWig; md5sum=caed5357d67e78b7b9dcdd273914c97c; size=345M
wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep4; type=bigWig; md5sum=ec1a6bd8011455d6ed6bd00c9c316dd6; size=320M
wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep3; type=bigWig; md5sum=a25ea03d5501e52e4c46f7a8e32f5b4c; size=360M
wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep4; type=bigWig; md5sum=5754036857bce7b8987b7e355d0bf194; size=334M
wgEncodeCshlLongRnaSeqMcf7NucleusPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6884; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=545c67a58f3916afd0fd3698a50859c6; size=376K
wgEncodeCshlLongRnaSeqMcf7NucleusPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6864; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=c0d0819e3833ab4e5f7df7620d5f63af; size=380K
wgEncodeCshlLongRnaSeqMcf7NucleusPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=755b457520d07d7e5d60864bf2e46ffc; size=477M
wgEncodeCshlLongRnaSeqMcf7NucleusPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=9c7590a1652bdd8593f8bbd77c86831b; size=524M
wgEncodeCshlLongRnaSeqMcf7NucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7415; geoSampleAccession=GSM981245; labExpId=LID46860,LID46859; bioRep=090N,089N; labProtocolId=090N+,089N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=924fc5bbfb63fcb689090c1f6681b401; size=7.6M
wgEncodeCshlLongRnaSeqMcf7NucleusPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6364; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapTranscriptGencV10; type=gtf; md5sum=d50761ba41d5be51467085980edf35b7; size=5.2M
wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1; type=bam; md5sum=3bade8f53b9b955eca1e4067bea8b6ef; size=7.0G
wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1; type=bai; md5sum=4ae12f6fd63a2dff47d95d3e54595842; size=7.5M
wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2; type=bam; md5sum=ff6b27d74f04471d7d0eaf322976ecf8; size=6.8G
wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2; type=bai; md5sum=a062ee60c57183d021c4f044118a8023; size=6.8M
wgEncodeCshlLongRnaSeqMonocd14CellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6042; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamContigs; type=bedRnaElements; md5sum=33fed4701771d39094fec19762721e85; size=15M
wgEncodeCshlLongRnaSeqMonocd14CellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7018; geoSampleAccession=GSM981259; labExpId=LID44658,LID44657; bioRep=040WC,039WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c3cef2629c7fe17ea9e8ad0a98fe9c31; size=11M
wgEncodeCshlLongRnaSeqMonocd14CellPamExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6389; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3f9968dbdb44babeba61f36a8b3505fd; size=20M
wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd1Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc72f5b7cb8253f1fce2f75b7bc44776; size=6.0G
wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd1Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=17aae206bf4c19d199d0f8fd48bd1570; size=5.8G
wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd2Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc3ab4773d17259c64c1ac2b4a63aec9; size=6.4G
wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd2Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=88b405389db82c3809a3933d67ee40cc; size=6.1G
wgEncodeCshlLongRnaSeqMonocd14CellPamGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7429; geoSampleAccession=GSM981259; labExpId=LID44658,LID44657; bioRep=040WC,039WC; labProtocolId=040WC-,039WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f801dda52f5261018b953690ff098397; size=3.7M
wgEncodeCshlLongRnaSeqMonocd14CellPamGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6389; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=95c0b288e664e7be502b86cbee7ef33a; size=1.8M
wgEncodeCshlLongRnaSeqMonocd14CellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6071; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamJunctions; type=bedRnaElements; md5sum=2437768371d09d94659391542f3b030d; size=7.3M
wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep1; type=bigWig; md5sum=9a506db8d54732862f80a18968567fc7; size=182M
wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep2; type=bigWig; md5sum=51ef1f65060e61314a1e86a77e0634b4; size=132M
wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep1; type=bigWig; md5sum=0891ff7691806519ec3ba3997a64b923; size=191M
wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep2; type=bigWig; md5sum=91fd26ec9b109384dc0a7aed05d28a0c; size=138M
wgEncodeCshlLongRnaSeqMonocd14CellPamProtocolRep1.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0e39010f90e4aca78a762b4eccdb4ae1; size=615K
wgEncodeCshlLongRnaSeqMonocd14CellPamProtocolRep2.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4319d8b33c711dc469a22d72f39ab2bd; size=605K
wgEncodeCshlLongRnaSeqMonocd14CellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a45df7b9231674d9325265d4c16d7513; size=548M
wgEncodeCshlLongRnaSeqMonocd14CellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b46366f72671a797e9ca8bb3903a343d; size=484M
wgEncodeCshlLongRnaSeqMonocd14CellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7429; geoSampleAccession=GSM981259; labExpId=LID44658,LID44657; bioRep=040WC,039WC; labProtocolId=040WC-,039WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8b1a481d54751151f152da99bcc17eee; size=4.2M
wgEncodeCshlLongRnaSeqMonocd14CellPamTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6389; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamTranscriptGencV10; type=gtf; md5sum=ee9add846019ffcbef7e807dc2c75254; size=4.8M
wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1; type=bam; md5sum=b39ad7d1dbd6a44599d40b16c41ca99a; size=12G
wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1; type=bai; md5sum=98406967d64ef16643e531ab884c66f3; size=7.4M
wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2; type=bam; md5sum=d090272b40cf392b3488b525b96c5239; size=7.7G
wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2; type=bai; md5sum=3a6ff505c4980c6a3d8eeb074d3eea29; size=6.3M
wgEncodeCshlLongRnaSeqMonocd14CellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6022; geoSampleAccession=GSM984609; labExpId=LID44594,LID44497; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapContigs; type=bedRnaElements; md5sum=44bf13306e4fa6c59ebf08d8371a62a5; size=11M
wgEncodeCshlLongRnaSeqMonocd14CellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7011; geoSampleAccession=GSM984609; labExpId=LID44497,LID44594; bioRep=040WC,039WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3e47f7ad62d70b4980053f0c830b7fca; size=13M
wgEncodeCshlLongRnaSeqMonocd14CellPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6382; geoSampleAccession=GSM984609; labExpId=LID44497,LID44594; bioRep=040WC,039WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=cbaf1900a61e9ab8739f6f37b3dad66e; size=20M
wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd1Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bf1f5e8b3ca82d0c87f50e6d8313aa20; size=7.7G
wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd1Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=792a76d277ae211a322f66db333259a5; size=5.2G
wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd2Rep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0ac05de75b2e16675c1a6294d2be6fa5; size=7.9G
wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd2Rep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8706f21f2a7ddf84c832c6666011403d; size=5.4G
wgEncodeCshlLongRnaSeqMonocd14CellPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7421; geoSampleAccession=GSM984609; labExpId=LID44497,LID44594; bioRep=040WC,039WC; labProtocolId=040WC+,039WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e98d363f81217dce64dd667f57ec6eda; size=1.5M
wgEncodeCshlLongRnaSeqMonocd14CellPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6382; geoSampleAccession=GSM984609; labExpId=LID44497,LID44594; bioRep=040WC,039WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8182a03183318c4cf10459022aa3746a; size=1.9M
wgEncodeCshlLongRnaSeqMonocd14CellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6060; geoSampleAccession=GSM984609; labExpId=LID44594,LID44497; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapJunctions; type=bedRnaElements; md5sum=657e558e117d7e7d5e5ef6da5058b2ec; size=9.6M
wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep1; type=bigWig; md5sum=f09524f9a056675a80dc3820440253d4; size=187M
wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep2; type=bigWig; md5sum=74b7bd550626c4454e8da5f55d842221; size=106M
wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep1; type=bigWig; md5sum=841b13fa779597939df632254fce633d; size=193M
wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep2; type=bigWig; md5sum=a32ba42348062f845d65bc14713b5802; size=109M
wgEncodeCshlLongRnaSeqMonocd14CellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7672; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; labProtocolId=039WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fb0991955e60b3402ec43b22e0d711d1; size=363K
wgEncodeCshlLongRnaSeqMonocd14CellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7681; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; labProtocolId=040WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=176279753fa90338b442b98ccac20a97; size=368K
wgEncodeCshlLongRnaSeqMonocd14CellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=911fdbea85b3db86dc8a4d6c2b03391b; size=983M
wgEncodeCshlLongRnaSeqMonocd14CellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=786f7731986ad8c4bb1c13eff4fa2085; size=525M
wgEncodeCshlLongRnaSeqMonocd14CellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7421; geoSampleAccession=GSM984609; labExpId=LID44497,LID44594; bioRep=040WC,039WC; labProtocolId=040WC+,039WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a399c1e2bcdde781d5f9375fd50f6965; size=2.0M
wgEncodeCshlLongRnaSeqMonocd14CellPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6382; geoSampleAccession=GSM984609; labExpId=LID44497,LID44594; bioRep=040WC,039WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapTranscriptGencV10; type=gtf; md5sum=5547ea5d21ece95c236e85f8266dd323; size=4.9M
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2; type=bam; md5sum=be85c4e0c78a3dd8e34f85fa58251d7d; size=24G
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2; type=bai; md5sum=581a9047438f4bc2e35010b0693d7b65; size=9.1M
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0739af44b9d7f32d76a72075d09a341d; size=15G
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c8ab6affaff91f0b26ee85d6bb53cfef; size=15G
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalMinusRep2; type=bigWig; md5sum=80ef57cbcba3a9d70daf096cfcbebde6; size=284M
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalPlusRep2; type=bigWig; md5sum=0ae8dd04e50219bfcffde530081af25e; size=292M
wgEncodeCshlLongRnaSeqNhdf00608013CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=dc4371d6fe885ee9cc2a33667084f3da; size=235M
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1; type=bam; md5sum=fae72b81d7df97d601119b9afc104ca8; size=24G
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1; type=bai; md5sum=22752bad04e5358220a455971d2a3a01; size=9.2M
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=aa581cd55cb8644d776ac755b47bf1ea; size=15G
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=305ef1a624983d79211f30906ff10654; size=15G
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalMinusRep1; type=bigWig; md5sum=64a39bdb1edff95be0e878e11a9415c1; size=353M
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalPlusRep1; type=bigWig; md5sum=5975e7cef4141548e622c753c632064c; size=368M
wgEncodeCshlLongRnaSeqNhdf70717012CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=114f9b7ca4044dd2275706052687dfa6; size=240M
wgEncodeCshlLongRnaSeqNhdfCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6041; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdfCellTotalContigs; type=bedRnaElements; md5sum=0914b6755916a0dd202f9598507328de; size=34M
wgEncodeCshlLongRnaSeqNhdfCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=0060801.3,7071701.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6992; geoSampleAccession=GSM984612; labExpId=LID47248,LID47247; bioRep=050WC,049WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=c5da3566684b2730d1d0c7bc9df6fb33; size=23M
wgEncodeCshlLongRnaSeqNhdfCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6388; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=c2489699b257d23140eef1784778cc02; size=20M
wgEncodeCshlLongRnaSeqNhdfCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=0060801.3,7071701.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7410; geoSampleAccession=GSM984612; labExpId=LID47248,LID47247; bioRep=050WC,049WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=3c2192de5f42ff4651247f897f508c0d; size=8.1M
wgEncodeCshlLongRnaSeqNhdfCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6388; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=65f49b2192a1b7b3118aca45387ada15; size=1.9M
wgEncodeCshlLongRnaSeqNhdfCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6070; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdfCellTotalJunctions; type=bedRnaElements; md5sum=b9fdf573cfbfe63f64bea344fe3570b6; size=13M
wgEncodeCshlLongRnaSeqNhdfCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6877; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=5d3567b0fcd08a7a82affe4b9be1d4c9; size=302K
wgEncodeCshlLongRnaSeqNhdfCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6889; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=1855427c19db51fb21ad0ce6eade2964; size=296K
wgEncodeCshlLongRnaSeqNhdfCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=0060801.3,7071701.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7410; geoSampleAccession=GSM984612; labExpId=LID47248,LID47247; bioRep=050WC,049WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fba7267288907905970cbc26c46ea026; size=8.8M
wgEncodeCshlLongRnaSeqNhdfCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6388; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdfCellTotalTranscriptGencV10; type=gtf; md5sum=6e4cbc45ec8fe8eba28e8215c68aab0b; size=5.0M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1; type=bam; md5sum=ba815560802acdc64f8eb11c8a11e1bb; size=9.6G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1; type=bai; md5sum=87f9e569038e345118b792de3bdea2d9; size=7.4M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2; type=bam; md5sum=f94a7cfe30a0607020b0df37d8efd3ed; size=8.0G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2; type=bai; md5sum=9cbf8fa98b0d83ce9a1f2f04d061ab72; size=7.1M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5; type=bam; md5sum=7bab32ad48f5740293502e56cb220a63; size=4.8G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5; type=bai; md5sum=ee9d44d24e56cb9b3e9477adeede18dd; size=5.3M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=75c68fd449e4813fc8cdeaa1d1bb83e9; size=6.9G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5ccfba41325768da4c5549ebb8884bde; size=6.3G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd1Rep5.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=43b179e25ba1e0766b46c1659d12e338; size=5.7G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=135d5629f47bc52e92ed836b4650d2ef; size=7.2G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9b924d2e8a1f7f0477cf3c0bad93df45; size=6.6G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd2Rep5.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9ea3fc3272d2cd09ee98a6a8a9834c1d; size=5.9G
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=d5f7326ea9cf5754f5421fa36338a714; size=804M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=14dc22f749a4b3b60b3c864740caf6a8; size=564M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep5.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep5; type=bigWig; md5sum=3133f7187f24ac39949d985b168767be; size=162M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=887d4676a036a3a61d2a5f89ce4ab71f; size=835M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a5d23a295cd0ebdd1047c1f460188e66; size=586M
wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep5.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep5; type=bigWig; md5sum=47544e596305a63c36946060f3f67be4; size=167M
wgEncodeCshlLongRnaSeqNhekCellPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamContigs; type=bedRnaElements; md5sum=5056155544db7223c2f4447aebded3f1; size=11M
wgEncodeCshlLongRnaSeqNhekCellPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamContigsV2; type=bedRnaElements; md5sum=715e0bad6dc206c3ca6a7ea50471fe0f; size=11M
wgEncodeCshlLongRnaSeqNhekCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6998; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6e2d66639f038a7f7d62b65cbb15db4d; size=8.7M
wgEncodeCshlLongRnaSeqNhekCellPamExonsDeNovoRep5.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6975; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4a979571c691449b68005bd4b4232d1b; size=2.6M
wgEncodeCshlLongRnaSeqNhekCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4567; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=725b80d884eaa10e031480bc0d860002; size=19M
wgEncodeCshlLongRnaSeqNhekCellPamExonsGencV7Rep5.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4594; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=22027259795d8b883615415ff265b952; size=16M
wgEncodeCshlLongRnaSeqNhekCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=23f9e197fb1c78f415be1536ec91459b; size=461K
wgEncodeCshlLongRnaSeqNhekCellPamGeneDeNovoRep5V2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7487; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labProtocolId=035WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8d8a8374678454b788fa78811dfa2ec3; size=503K
wgEncodeCshlLongRnaSeqNhekCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7460; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labProtocolId=007WC-,008WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1c3ba3e4c0372bd1378af83e57ce12a3; size=3.7M
wgEncodeCshlLongRnaSeqNhekCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4567; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=61c8d2d9ad7f073b5c1e1b396f2351d3; size=2.0M
wgEncodeCshlLongRnaSeqNhekCellPamGeneGencV7Rep5.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4594; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ee03d88791ff770da4f538574f9a8033; size=1.8M
wgEncodeCshlLongRnaSeqNhekCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamJunctions; type=bedRnaElements; md5sum=958fbd2f5cf6633133eaa3b2bb8ea815; size=2.3M
wgEncodeCshlLongRnaSeqNhekCellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=15b2e4efff20f8b6e6347d8e7d1523c6; size=434K
wgEncodeCshlLongRnaSeqNhekCellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0df8cebf5806287e27118bdeaf0f2c44; size=432K
wgEncodeCshlLongRnaSeqNhekCellPamProtocolRep5.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a0e382472b10ad9b067cac3c51fcca1d; size=432K
wgEncodeCshlLongRnaSeqNhekCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4216; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=f76c53dabcb691459200cfb73384117c; size=290M
wgEncodeCshlLongRnaSeqNhekCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4289; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e65b0b5d33dc626a7270d46a3c9fd705; size=289M
wgEncodeCshlLongRnaSeqNhekCellPamSpikeinsRep5.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4240; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e7858f54ad2b08a10b263ac0117fda7e; size=554M
wgEncodeCshlLongRnaSeqNhekCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d52fa8d3fdc74f52d1b3b987826d9ccd; size=3.0M
wgEncodeCshlLongRnaSeqNhekCellPamTranscriptDeNovoRep5V2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7487; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labProtocolId=035WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=cf1b38c11fdc022485132f4781497dc3; size=681K
wgEncodeCshlLongRnaSeqNhekCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7460; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labProtocolId=007WC-,008WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fdd1ef59bbe2a409a03505cdd7467fc6; size=4.2M
wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4567; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7; type=gtf; md5sum=ff4d40b5ae929a2d4041231dac69ea54; size=4.8M
wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7Rep5.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4594; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7Rep5; type=gtf; md5sum=2c38a07267bf15feae17b718651c1abe; size=4.0M
wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1; type=bam; md5sum=fdb107e530b460d85d2b8065046d30ca; size=15G
wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1; type=bai; md5sum=b5ed2e95c70bdc9600d29b859867cca0; size=7.3M
wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2; type=bam; md5sum=03533a790e8de262cfa787b6dd5b7afa; size=15G
wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2; type=bai; md5sum=597194fc38a6a12190a406a18e2da9fe; size=7.7M
wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-09; dateUnrestricted=2012-03-08; subId=4055; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5; type=bam; md5sum=3791b2508d5c8a6f7449030edaee081e; size=14G
wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-09; dateUnrestricted=2012-03-08; subId=4055; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5; type=bai; md5sum=e4b80d9277f10b4eaf6163b858024771; size=6.8M
wgEncodeCshlLongRnaSeqNhekCellPapContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapContigs; type=bedRnaElements; md5sum=1f74fdd50ff7a9aaa4eaae3f40e73fea; size=13M
wgEncodeCshlLongRnaSeqNhekCellPapContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapContigsV2; type=bedRnaElements; md5sum=4d0d72a45de90ac2349cd41078e9596d; size=13M
wgEncodeCshlLongRnaSeqNhekCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7020; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c2ee26c3ca15614dd269f52ab0962ad8; size=7.1M
wgEncodeCshlLongRnaSeqNhekCellPapExonsDeNovoRep5.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6962; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4c86c4a940a82cc846fa370ef9f90847; size=5.0M
wgEncodeCshlLongRnaSeqNhekCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4591; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ec64ee77cb3eeeb6b45e5de8e928b974; size=19M
wgEncodeCshlLongRnaSeqNhekCellPapExonsGencV7Rep5.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4574; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=28c473dee57cc07af40bc1539ed566b4; size=17M
wgEncodeCshlLongRnaSeqNhekCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ffa3e44ec4fbd82a7a501bf4f24d08b3; size=9.3G
wgEncodeCshlLongRnaSeqNhekCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d75c60cbbd38d5ed7cce1fc7f440371e; size=9.0G
wgEncodeCshlLongRnaSeqNhekCellPapFastqRd1Rep5.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=36e71428a848cafd390ba8acdbcb536c; size=8.9G
wgEncodeCshlLongRnaSeqNhekCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c1b3d38d247d925ff9be02db2de8e3bd; size=9.5G
wgEncodeCshlLongRnaSeqNhekCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7834c45f18ebf4c5e0821afd68222088; size=9.2G
wgEncodeCshlLongRnaSeqNhekCellPapFastqRd2Rep5.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b40a359f6ac9e778155b3046c0c78562; size=9.1G
wgEncodeCshlLongRnaSeqNhekCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=819923c32c333e7af2ec9ee6532184c3; size=586K
wgEncodeCshlLongRnaSeqNhekCellPapGeneDeNovoRep5V2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7468; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labProtocolId=035WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fa0a44ffe15e35372ae20b7fd7d4b2f2; size=559K
wgEncodeCshlLongRnaSeqNhekCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7484; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labProtocolId=007WC+,008WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=201cd95ba2d58f707953b1b0b0886036; size=1.5M
wgEncodeCshlLongRnaSeqNhekCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4591; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9e2b1f3d480663fa053c6019a8dad7b3; size=2.1M
wgEncodeCshlLongRnaSeqNhekCellPapGeneGencV7Rep5.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4574; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4f5c2266c474c5cf805587447c38f1c3; size=1.9M
wgEncodeCshlLongRnaSeqNhekCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapJunctions; type=bedRnaElements; md5sum=92e19e55055e0dd805de7849751c168a; size=5.5M
wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep1; type=bigWig; md5sum=fa321fb9b90eff05c3a62915ede57009; size=641M
wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep2; type=bigWig; md5sum=6799ad68dad862733e89182c81885def; size=525M
wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep5.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep5; type=bigWig; md5sum=55c7a8f89b3df6076776e73f5cd90a70; size=374M
wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep1; type=bigWig; md5sum=50538ed59934b01298a5baa8bd351ba9; size=665M
wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep2; type=bigWig; md5sum=f5050b3d980fe128493e476d8d38642b; size=543M
wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep5.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep5; type=bigWig; md5sum=b34a5c33ee66f69b25c14fec3156f9ad; size=384M
wgEncodeCshlLongRnaSeqNhekCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=09d462d51c22eae7c1259d11927f376d; size=1.4M
wgEncodeCshlLongRnaSeqNhekCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=812d49c7a74ce0a2c88b40bdb8b18ac7; size=1.5M
wgEncodeCshlLongRnaSeqNhekCellPapProtocolRep5.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=00432c33ecbb7a2be5105adb6c27da34; size=553K
wgEncodeCshlLongRnaSeqNhekCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4186; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e95bea1b5a19f5bf0014900faa1e46c2; size=434M
wgEncodeCshlLongRnaSeqNhekCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4194; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c581ccf620d453ffb10948f668a94b09; size=398M
wgEncodeCshlLongRnaSeqNhekCellPapSpikeinsRep5.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4219; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=28eff96a6fa0d774158a5279ed7f291b; size=263M
wgEncodeCshlLongRnaSeqNhekCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=77801c03809242b4be449e1bb42f7338; size=8.1M
wgEncodeCshlLongRnaSeqNhekCellPapTranscriptDeNovoRep5V2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7468; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labProtocolId=035WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=29ea3910c845e208648629499c8a5b58; size=905K
wgEncodeCshlLongRnaSeqNhekCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7484; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labProtocolId=007WC+,008WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=15b398008f1bc93e25a0818ab750f0c7; size=1.9M
wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4591; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7; type=gtf; md5sum=e69f35ee3ab615eefd9ccce307aeca47; size=5.1M
wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7Rep5.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4574; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7Rep5; type=gtf; md5sum=8dd1b15fbc3d9a85ca10e1de207ace9b; size=4.4M
wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3; type=bam; md5sum=f9b10cf320669cd58973b58c54c387d5; size=5.3G
wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3; type=bai; md5sum=3ddedce085c3343cd4cd1a9ac35620da; size=4.1M
wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=06cb0c1084e749fe8c9e723f00650b3f; size=3.2G
wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=720e410ea53d2ee90f4d0f6cf915982d; size=3.3G
wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=2bc108cf833b0eb748003510ac2965c8; size=20M
wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=e99d6004e9c38e8a834e1ac6ccec0bc9; size=20M
wgEncodeCshlLongRnaSeqNhekCytosolPamContigs.bedRnaElements.gz	objStatus=replaced; project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamContigs; type=bedRnaElements; md5sum=31e6d9969d3a2438eb078499b50b9084; size=3.5M
wgEncodeCshlLongRnaSeqNhekCytosolPamContigsV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamContigsV2; type=bedRnaElements; md5sum=017aba60d0122b148c3cca7d7e9075dd; size=3.6M
wgEncodeCshlLongRnaSeqNhekCytosolPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6978; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=26f64a56d062d8cc4dc280b250d1a5fc; size=2.6M
wgEncodeCshlLongRnaSeqNhekCytosolPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4598; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=29f567bbfd9cf02129b653d417747480; size=16M
wgEncodeCshlLongRnaSeqNhekCytosolPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=df9e9730efa6ddd07bc5250aba66b259; size=326K
wgEncodeCshlLongRnaSeqNhekCytosolPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7490; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labProtocolId=027C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=a235efa3623860a186066fd136733dee; size=388K
wgEncodeCshlLongRnaSeqNhekCytosolPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4598; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8fec64679a6fdb52458409a8636097a5; size=1.8M
wgEncodeCshlLongRnaSeqNhekCytosolPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamJunctions; type=bedRnaElements; md5sum=60fec923f4af2ed87685e16d5059c0e7; size=1.7M
wgEncodeCshlLongRnaSeqNhekCytosolPamSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4245; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c0e625e8d2f1ce3ae19bac52b2c8bdc0; size=65M
wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7653ff7942e66b9105c412539cbf3eb7; size=2.4M
wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7490; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labProtocolId=027C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a4f54df43e4d54ccb4d2f5e4e8d0809f; size=564K
wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4598; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptGencV7; type=gtf; md5sum=bb2d63629420f8b381faee41951d1a48; size=4.0M
wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3; type=bam; md5sum=f492340b01f4ac5ccb4382ebc380853d; size=10G
wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3; type=bai; md5sum=62d069ce47be62666b4d96627cac07a9; size=6.4M
wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4; type=bam; md5sum=d610e44942f334acf5416d314301f44e; size=12G
wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4; type=bai; md5sum=b429c4c861bdd0c2dc389bf06ba2ab60; size=6.5M
wgEncodeCshlLongRnaSeqNhekCytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapContigs; type=bedRnaElements; md5sum=6eeda669573796801965dac043961e2a; size=5.6M
wgEncodeCshlLongRnaSeqNhekCytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6977; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=003673f6a9c9ec4643b918290f03bd73; size=6.5M
wgEncodeCshlLongRnaSeqNhekCytosolPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4597; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ba6c94c412e48685462aa3de2220ea55; size=19M
wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b58e381ecdf68e6b600406761b9f7edd; size=6.2G
wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3ca0d75c2ae1750a4a87274c03fa92d2; size=7.5G
wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a9991890ccd58eaceee2067bf5d5ee5b; size=6.6G
wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c6df1b262ab2c7dcad6e7128381eeaec; size=7.6G
wgEncodeCshlLongRnaSeqNhekCytosolPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7a181dcaffec4762b3f39a12d5bfc3cd; size=776K
wgEncodeCshlLongRnaSeqNhekCytosolPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7491; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labProtocolId=027C+,028C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6a4f9cd1f18154e027fab1ec284394f6; size=750K
wgEncodeCshlLongRnaSeqNhekCytosolPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4597; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8953b93d6ee4d86ee73706d3400fff4b; size=2.0M
wgEncodeCshlLongRnaSeqNhekCytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapJunctions; type=bedRnaElements; md5sum=cb6fc475e409ff5e2fb3276edf49151e; size=8.4M
wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep3; type=bigWig; md5sum=ef567791e68b9d8640bdbae36a54cff4; size=192M
wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep4; type=bigWig; md5sum=dfb161ab8a4b3fd2d57a46867d467297; size=214M
wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep3; type=bigWig; md5sum=5da4cdaf79d1b7885e8090e3bb9f60e3; size=196M
wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep4; type=bigWig; md5sum=e54c60e7e94ee9d8b03a4a97e0cf00a3; size=218M
wgEncodeCshlLongRnaSeqNhekCytosolPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fb234e279b2e98c7928ee8a4c501ec5a; size=565K
wgEncodeCshlLongRnaSeqNhekCytosolPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=17b5e63eb98256dc9db49798a90fc0bb; size=560K
wgEncodeCshlLongRnaSeqNhekCytosolPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4214; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=37f99607707db4b8db9c76d7446ed23e; size=119M
wgEncodeCshlLongRnaSeqNhekCytosolPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4247; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6c8107ee1d74f051f4742b52871f55d7; size=63M
wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c24d66dd78d9bfbe13f1e578012e40c1; size=12M
wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7491; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labProtocolId=027C+,028C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a2ce5efe4a0a3e54d62eb25b0ba21907; size=1.2M
wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4597; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptGencV7; type=gtf; md5sum=e49f5b127b06087b9ce4ab6cbde17a6f; size=4.9M
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3; type=bam; md5sum=02099f50cf7b7c8937be7b0642e7baac; size=9.4G
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3; type=bai; md5sum=ba4116e234aecfdc7012487ff4dbcda7; size=6.8M
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4; type=bam; md5sum=ba7e1230ab689959495443a9bedb560e; size=6.6G
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4; type=bai; md5sum=f22059c8c7c17156a650537dd4a0dc1f; size=6.6M
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b87d8f30a45cf23be49f405be8f5b9c6; size=5.9G
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1f23451b28e874062d62a2f7d3b13c75; size=4.1G
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2e9189c8b4a4740898405c18e1fc3266; size=6.0G
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b6ed7bb9dad3890229f1718a459ecd1b; size=4.5G
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=8bc634f1572597eaa1a9b14b1cb58857; size=204M
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep4; type=bigWig; md5sum=6327cf82fed3808907b82d0f9ed1626a; size=163M
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=18cac1e3d895661fcf1c9e978fc7777e; size=214M
wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep4; type=bigWig; md5sum=8f91402f3c1a20eb4f5636346f5d3f42; size=170M
wgEncodeCshlLongRnaSeqNhekNucleusPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPamContigs; type=bedRnaElements; md5sum=d0031f6f30f783e0c696ff5dfeb8ade1; size=15M
wgEncodeCshlLongRnaSeqNhekNucleusPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6956; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=53a86b7402d5317962d137abce5def29; size=11M
wgEncodeCshlLongRnaSeqNhekNucleusPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4566; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7480fe701f9aacd286fdbdb44caff68f; size=18M
wgEncodeCshlLongRnaSeqNhekNucleusPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a6d4fd3e078626c0cc0ddfa3d3619554; size=4.1M
wgEncodeCshlLongRnaSeqNhekNucleusPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7461; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labProtocolId=027N-,028N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6076d5ef2b137654fc01705cb4968512; size=5.2M
wgEncodeCshlLongRnaSeqNhekNucleusPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4566; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=197bb29518d2d9dd4d113a180a37d854; size=2.0M
wgEncodeCshlLongRnaSeqNhekNucleusPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPamJunctions; type=bedRnaElements; md5sum=4fc6486e82896587d372b5acfe581c40; size=5.2M
wgEncodeCshlLongRnaSeqNhekNucleusPamProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=cdf054bfe5838ea05a3498581ebc5039; size=425K
wgEncodeCshlLongRnaSeqNhekNucleusPamProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a3801fd4f78a0df84824d8eaa808c4c6; size=427K
wgEncodeCshlLongRnaSeqNhekNucleusPamSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4274; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=565712721f8376aabd8b2245b11e4127; size=294M
wgEncodeCshlLongRnaSeqNhekNucleusPamSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4267; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8e516ee288224343eeb8c5809b9659b0; size=219M
wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=261437999fa506ec487569ca6714a734; size=20M
wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7461; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labProtocolId=027N-,028N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=901c20627f445e40afeec1a4f30f16a9; size=5.7M
wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4566; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptGencV7; type=gtf; md5sum=5416a3d3b554eafc47ac11e792d26bda; size=4.7M
wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3; type=bam; md5sum=9a84331b37acc0c36a664d5ce8ac865c; size=12G
wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3; type=bai; md5sum=eafb48e28b0190f25ef83c0e2cb014d3; size=7.6M
wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4053; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4; type=bam; md5sum=6cafcb02a85fd372172269decf0136b9; size=14G
wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4053; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4; type=bai; md5sum=2794f7213c79fd45a25d60754a61b61d; size=7.9M
wgEncodeCshlLongRnaSeqNhekNucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapContigs; type=bedRnaElements; md5sum=0bb148a3d277216ff8dc0cdd53069999; size=19M
wgEncodeCshlLongRnaSeqNhekNucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7000; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0746d91e50c74f40b17244ce0b941d56; size=7.8M
wgEncodeCshlLongRnaSeqNhekNucleusPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4569; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9c4a2a62385eeb7ecfe22a4a20bf026f; size=19M
wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fcab47b8b7e1259e9b2809973d3da765; size=6.9G
wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=66102a6e8aacf47f6deabd2aadd81101; size=8.2G
wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=74fadbe4941b78aa0b3e75f57825ab99; size=7.1G
wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=58838645f7145a891bc3ba92b613bb30; size=8.4G
wgEncodeCshlLongRnaSeqNhekNucleusPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5582acc641d2bfeabab79a235f49b5c; size=2.3M
wgEncodeCshlLongRnaSeqNhekNucleusPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7464; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labProtocolId=027N+,028N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=df46f1698213cbb9e755379125621d34; size=2.2M
wgEncodeCshlLongRnaSeqNhekNucleusPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4569; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4f8f991a62deb7294eac13e69c3b9edb; size=2.1M
wgEncodeCshlLongRnaSeqNhekNucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapJunctions; type=bedRnaElements; md5sum=bda71cb811aeb532fc20701d68511c7b; size=11M
wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep3; type=bigWig; md5sum=df22bd36f38590b66916f04ed31528ee; size=851M
wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep4; type=bigWig; md5sum=4fa8f4703d96d1233bdda4c803880b2d; size=937M
wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep3; type=bigWig; md5sum=35c07d42ca0a70f76150c885e8e0d007; size=885M
wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep4; type=bigWig; md5sum=afcdd9e0d93a86157171b8422199435d; size=973M
wgEncodeCshlLongRnaSeqNhekNucleusPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=3f940d6c800429698213393a801e5594; size=565K
wgEncodeCshlLongRnaSeqNhekNucleusPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=db70f053d5bcd83ff9c85d9940cefb40; size=560K
wgEncodeCshlLongRnaSeqNhekNucleusPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4237; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e554b7c3374606f3fb72c418dbbee1e6; size=53M
wgEncodeCshlLongRnaSeqNhekNucleusPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4218; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5fc261f23650798f2c264e8102719212; size=23M
wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=207ee2d2f8421cf865774cdac6422380; size=21M
wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7464; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labProtocolId=027N+,028N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c78d7f4892ace7111e0d9831a78664fd; size=2.7M
wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4569; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptGencV7; type=gtf; md5sum=1b3a0db20f9e9209b25b7f7141598eef; size=5.0M
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2; type=bam; md5sum=3f6b82285789827c79f7c96df33672e6; size=17G
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2; type=bai; md5sum=8bfb2fd9afff17550ffa96001b0ae03c; size=8.1M
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=8c0bb914d8ba16ff131e188b20ed31e8; size=11G
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=48c5153e45a2de5e3707083db66b90d2; size=11G
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalMinusRep2; type=bigWig; md5sum=1bcbf99166f12d908ea3c9832c433986; size=212M
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalPlusRep2; type=bigWig; md5sum=430b23de53573016e8d4fdcf6d6a133b; size=217M
wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=e27c64e34a0bd5623f58b19c09661ffc; size=267M
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1; type=bam; md5sum=c40284c2037c2f1737992bee8e7c33e4; size=18G
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1; type=bai; md5sum=eea3bccb08798ace9ed3496bba7722fd; size=8.0M
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c74c18204a5d2a0b10e93608b197fc56; size=12G
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=cdf30bdc12c25ac6cd712defe62540e0; size=12G
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalMinusRep1; type=bigWig; md5sum=ae9ab79078653dae2db451bfd58225fd; size=182M
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalPlusRep1; type=bigWig; md5sum=5fd9bca9af039156eacae61f4a88acf6; size=186M
wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0b25371724fdd2fd0eba27b948f98f5a; size=207M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6015; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm2CellTotalContigs; type=bedRnaElements; md5sum=e9b6bb05e3e5df41a20cec642f47e66d; size=32M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6984; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=291e07073fd8ca654f0ccb2cab1a9602; size=18M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6361; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=dfc01b15908bf056f7d2272bf32905b9; size=20M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7401; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=988762065c0a6b95cee7f9127bca798f; size=5.5M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6361; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=7eedc461f5e4ba88c91eb18fad48ce41; size=1.9M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6047; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm2CellTotalJunctions; type=bedRnaElements; md5sum=96910bedc16875d58d9a43bfbd5cd4d8; size=11M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9cdddf098b5ff6673619d26e29f18cc6; size=223K
wgEncodeCshlLongRnaSeqNhemfm2CellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6901; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=477b792b3a6d4bab0b8477312f0a936a; size=297K
wgEncodeCshlLongRnaSeqNhemfm2CellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7401; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=f2e2e93d1107884220a2d91e02105028; size=6.1M
wgEncodeCshlLongRnaSeqNhemfm2CellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6361; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm2CellTotalTranscriptGencV10; type=gtf; md5sum=1f5498dcb31b30cbc8138602e7bdf059; size=4.9M
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2; type=bam; md5sum=966431ed3c3168bc63042e663d37c28c; size=18G
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2; type=bai; md5sum=d22dcd0bdb827b1e04610950bced6c77; size=7.8M
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=1836847e906687a72b88caa42688a03c; size=11G
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=61ce9c39490601f450c3a7d132b7f263; size=12G
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalMinusRep2; type=bigWig; md5sum=e7d753329e6a29f7e216782e32fead53; size=166M
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalPlusRep2; type=bigWig; md5sum=6e040aaa6227e26edb77634489115fe2; size=170M
wgEncodeCshlLongRnaSeqNhemm270110012CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=9882b7aa06df6e7718b5f48946dfaf93; size=327M
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1; type=bam; md5sum=f8427e2972fa56e11789f870f3a67e01; size=16G
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1; type=bai; md5sum=b66fe942105c3e53f5b8230a9d8829e2; size=7.8M
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=533be35dd4c7824e20d7d779bf8ddc9c; size=9.4G
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d89bf7f4048c168023407f283900557c; size=9.6G
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalMinusRep1; type=bigWig; md5sum=576da37fcd87150aad2b0a5295f54ab2; size=223M
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalPlusRep1; type=bigWig; md5sum=5b50db19ca2b11c1d7c5bc226be8a64c; size=228M
wgEncodeCshlLongRnaSeqNhemm27012303CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ef31738a77733b1c68d36b46589008a6; size=289M
wgEncodeCshlLongRnaSeqNhemm2CellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6032; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm2CellTotalContigs; type=bedRnaElements; md5sum=acb92165efc30f0c1dfaa7efd1288bdd; size=33M
wgEncodeCshlLongRnaSeqNhemm2CellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7002; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=a02ed17ac00e0f01c4e7b4eeb5e8c469; size=18M
wgEncodeCshlLongRnaSeqNhemm2CellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6379; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=ecb20cb5c50467883f8c28c6ab3549c7; size=20M
wgEncodeCshlLongRnaSeqNhemm2CellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7418; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=1a8f73c87233d889cab778bf4095d499; size=5.9M
wgEncodeCshlLongRnaSeqNhemm2CellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6379; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=a0a22562917cea83ac99f3792805e824; size=1.9M
wgEncodeCshlLongRnaSeqNhemm2CellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6051; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm2CellTotalJunctions; type=bedRnaElements; md5sum=2e96eba2e03a6f07bd2f2900fc50dcd0; size=9.1M
wgEncodeCshlLongRnaSeqNhemm2CellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6887; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=6522d31822ae8984fa64b7261f588771; size=294K
wgEncodeCshlLongRnaSeqNhemm2CellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=a63b380c60193c26f8b682078d4d0e84; size=295K
wgEncodeCshlLongRnaSeqNhemm2CellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7418; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=0deee3a32f7cc8d72b532e7ee7701e4d; size=6.6M
wgEncodeCshlLongRnaSeqNhemm2CellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6379; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm2CellTotalTranscriptGencV10; type=gtf; md5sum=d5c1ef778f8e9f2fe30f09becc2d6db6; size=4.9M
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1; type=bam; md5sum=aba5a8b521e3e06534c92226b2c9c254; size=5.9G
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1; type=bai; md5sum=583ae0e3b4bd355ecf84e8d70cc5308f; size=5.1M
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2; type=bam; md5sum=97687668c8dff5f0b71e7a1bc34e5875; size=5.1G
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2; type=bai; md5sum=f65ce0c7f6f8031389c399d430cf003a; size=5.2M
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1ad02931265325b6f5489ffb8eadb133; size=7.5G
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ac0423716bfa28414b42354788e83908; size=6.8G
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=91b60a1a1dc6b330c45dfc73c9937485; size=7.9G
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=154b5ea5ed332ce7051b162170af003f; size=7.0G
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=17f60d379e793b8fe79967446e4b5a8b; size=103M
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=858e232c2e4c9cf48dd07c73c4e74e9d; size=104M
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=c1ff2b8ea3ead99adfabd7985e001149; size=106M
wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=af04853f2c18d1701c106c0246b6b23d; size=107M
wgEncodeCshlLongRnaSeqNhlfCellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPamContigs; type=bedRnaElements; md5sum=6f5423907015f4129ac13139503e12a2; size=4.1M
wgEncodeCshlLongRnaSeqNhlfCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6961; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c094f3b2268c146cf27441a0fecd025d; size=3.1M
wgEncodeCshlLongRnaSeqNhlfCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4573; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6971bc8cd25c70c7924069fd8dd26027; size=17M
wgEncodeCshlLongRnaSeqNhlfCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3ac6f8262bd56d6f5359bdcfd40879a1; size=357K
wgEncodeCshlLongRnaSeqNhlfCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7467; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labProtocolId=033WC-,034WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=2d7806f6a5330fe8989cda9da54fe8af; size=664K
wgEncodeCshlLongRnaSeqNhlfCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4573; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=440cd10b30b5eebf3926822d7ecdb561; size=2.0M
wgEncodeCshlLongRnaSeqNhlfCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPamJunctions; type=bedRnaElements; md5sum=e5a64b6fe5554d1dfd3e25e5e45ebd70; size=3.5M
wgEncodeCshlLongRnaSeqNhlfCellPamProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8af3152f79ffe67a19ab956a7459d95a; size=430K
wgEncodeCshlLongRnaSeqNhlfCellPamProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bb58110fc2c3e94708c2772447fe3668; size=436K
wgEncodeCshlLongRnaSeqNhlfCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4281; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=176bd728ba40fdad6a57277b28bc8920; size=971M
wgEncodeCshlLongRnaSeqNhlfCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4275; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=cfaa1c9b6890932f69a883780f0dc5b5; size=898M
wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d2721ea47d5028724f986a001897d0e6; size=2.1M
wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7467; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labProtocolId=033WC-,034WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a9d946735dc350b6afa1c86d98b5d544; size=849K
wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4573; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptGencV7; type=gtf; md5sum=cf1a91b73707d8a7874e541baaee2863; size=4.4M
wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4052; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1; type=bam; md5sum=a451ea7f75cafe3427c678d9d3c5b285; size=15G
wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4052; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1; type=bai; md5sum=28bf61a235ed513c11823020b39fcb4c; size=6.6M
wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4054; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2; type=bam; md5sum=924e6c1e031556fa12953ca0c6084df2; size=15G
wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4054; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2; type=bai; md5sum=eab5b0907c424c578932fb4d6771146b; size=6.7M
wgEncodeCshlLongRnaSeqNhlfCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapContigs; type=bedRnaElements; md5sum=9b52b4082fb40ca137c3da6d7a197ab1; size=11M
wgEncodeCshlLongRnaSeqNhlfCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6987; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=078e185047b38032c82efa75fd50cfe1; size=6.3M
wgEncodeCshlLongRnaSeqNhlfCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4543; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d37fc9e7e4badd931c92167615bda2e2; size=19M
wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3cb0cb139b4884f386202cf15057825f; size=8.9G
wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=53ba9be9c2b28642221abcc5d199dfa0; size=9.0G
wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=247d16414b244019f2e043740cc8527e; size=9.1G
wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=52cf67764719cf1d93abbd3e412adaa6; size=9.2G
wgEncodeCshlLongRnaSeqNhlfCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=de45069a8047f802f00cb8a04ff80243; size=905K
wgEncodeCshlLongRnaSeqNhlfCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7437; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labProtocolId=033WC+,034WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=cf9a7cbb3f850f060419a509e95fa17b; size=882K
wgEncodeCshlLongRnaSeqNhlfCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4543; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3920435cb7a9d4f4f0d13807c44e849c; size=2.0M
wgEncodeCshlLongRnaSeqNhlfCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapJunctions; type=bedRnaElements; md5sum=ef107f3adcb282f7f9fac9181e4d7ac4; size=8.8M
wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep1; type=bigWig; md5sum=73f4e98406eccf7317918c01089d486d; size=400M
wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep2; type=bigWig; md5sum=766d84675266cef1b7009bcf33b13dde; size=443M
wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep1; type=bigWig; md5sum=2ce194cf03e060024627c950c67ca6da; size=411M
wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep2; type=bigWig; md5sum=89b8d0a01eaaea43df2a51d2a236f64a; size=455M
wgEncodeCshlLongRnaSeqNhlfCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=2864ed21ea3c89841b37c0a0df2bc256; size=579K
wgEncodeCshlLongRnaSeqNhlfCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=ce8ac78c4215bdd8a46fb2aea9c1921b; size=612K
wgEncodeCshlLongRnaSeqNhlfCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4278; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a8cd0e0294f3bb0ef5671b7365d81f27; size=117M
wgEncodeCshlLongRnaSeqNhlfCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4266; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d93dd557bd18ecd6f6f33811e919783b; size=184M
wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5b64cb3669031465a04d523a00aa4113; size=13M
wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7437; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labProtocolId=033WC+,034WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2eccb8ccd4619f8efdc6c7b077343d03; size=1.3M
wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4543; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptGencV7; type=gtf; md5sum=c375b99857b4b7f36b09b29104008110; size=5.0M
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2; type=bam; md5sum=eef8f32de92f77db4270532f54346f56; size=25G
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2; type=bai; md5sum=4c97886435f59df657b0165c12497d9a; size=8.8M
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fc5bd142db83d76685d2b34d9b84c873; size=17G
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=a88bb8c3eaa3ed322e4c71b5ff4e570a; size=17G
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalMinusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalMinusRep2; type=bigWig; md5sum=c48e14eddde9e9e82e7ede983a9cfcc0; size=116M
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalPlusRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalPlusRep2; type=bigWig; md5sum=90cdf04d2ebe7b914aa9198c22e1a145; size=117M
wgEncodeCshlLongRnaSeqSkmc812190217CellTotalSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ace9bbc46b765c0bb52fe4a3c2927151; size=286M
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1; type=bam; md5sum=eb92e112288d1653c76fb63387e3fb99; size=28G
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1; type=bai; md5sum=3b186e9fc3aac20500bc8542e409be88; size=9.4M
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c3176ed0aeb17ff10a85501e8b137ace; size=19G
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=b87f41fab4fcf2c990c23f3cde4ec4bd; size=19G
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalMinusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalMinusRep1; type=bigWig; md5sum=8df4ffa0687933ff26f31ecf4398cd40; size=183M
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalPlusRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalPlusRep1; type=bigWig; md5sum=1e953bb4d69d455b2de37501fba7ad0f; size=140M
wgEncodeCshlLongRnaSeqSkmc9011302CellTotalSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=d0cee653788f0c342697785d7e530d7f; size=257M
wgEncodeCshlLongRnaSeqSkmcCellTotalContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6024; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmcCellTotalContigs; type=bedRnaElements; md5sum=0120de5850b5d5996fc822d311d25ef7; size=34M
wgEncodeCshlLongRnaSeqSkmcCellTotalExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6937; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=f8e664340b359b3857d7289c216aa87d; size=23M
wgEncodeCshlLongRnaSeqSkmcCellTotalExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6370; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=53aa410e54a675b3d2f3e0473cfddcee; size=20M
wgEncodeCshlLongRnaSeqSkmcCellTotalGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7408; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=08c4935c1c5d649ddfbd4db439bb057b; size=9.1M
wgEncodeCshlLongRnaSeqSkmcCellTotalGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6370; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=60ead7c3b19481c71bcffbe1ab956fc0; size=1.9M
wgEncodeCshlLongRnaSeqSkmcCellTotalJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6062; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmcCellTotalJunctions; type=bedRnaElements; md5sum=c2c13a082508532b3057ed36d6bd9fae; size=12M
wgEncodeCshlLongRnaSeqSkmcCellTotalProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6888; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=b5c0174162ff1b525b2b87db55b0857c; size=297K
wgEncodeCshlLongRnaSeqSkmcCellTotalProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6908; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=178f9446ee008206a28d8849f1783064; size=296K
wgEncodeCshlLongRnaSeqSkmcCellTotalTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7408; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=e3cc1d7ba6371662e2a62bf234d6d392; size=10M
wgEncodeCshlLongRnaSeqSkmcCellTotalTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6370; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmcCellTotalTranscriptGencV10; type=gtf; md5sum=aa591a601a22671cfd1460c1ea51261a; size=4.8M
wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3; type=bam; md5sum=659e858b34d7a71e6c2258a9ef313320; size=15G
wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3; type=bai; md5sum=066992e491ecfd2cb72348dd76fb574e; size=7.5M
wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4; type=bam; md5sum=7e1af1b62f25769d06f86d5a8e60b777; size=11G
wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4; type=bai; md5sum=98a721411bc4a3d908e2dcb7f514d2d4; size=7.4M
wgEncodeCshlLongRnaSeqSknshCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6017; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapContigs; type=bedRnaElements; md5sum=22a398338acc8e71f11a1fbaceb23ac5; size=19M
wgEncodeCshlLongRnaSeqSknshCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6973; geoSampleAccession=GSM981253; labExpId=LID46599,LID46598; bioRep=086WC,085WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=e5a09e06eab4c8587b98c5a793639c53; size=16M
wgEncodeCshlLongRnaSeqSknshCellPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6363; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=6bec5f73c780a60db1d2585d7c70b599; size=21M
wgEncodeCshlLongRnaSeqSknshCellPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3ac750d2ebdb7b5e13d9f823283c0cb7; size=9.9G
wgEncodeCshlLongRnaSeqSknshCellPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=f35f3523ded2b3dc0e8fc798b9dc476c; size=6.8G
wgEncodeCshlLongRnaSeqSknshCellPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=eecfc792365a02ede95533052ce2a867; size=10G
wgEncodeCshlLongRnaSeqSknshCellPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=4a71dafa1d07686b749064e99b008fce; size=7.6G
wgEncodeCshlLongRnaSeqSknshCellPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7430; geoSampleAccession=GSM981253; labExpId=LID46599,LID46598; bioRep=086WC,085WC; labProtocolId=086WC+,085WC+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=21e2e935eb8cd927aad9ae392cbd107a; size=1.5M
wgEncodeCshlLongRnaSeqSknshCellPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6363; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=6fee7fcdda4716a2b3d56ab51aeb25a1; size=1.9M
wgEncodeCshlLongRnaSeqSknshCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6053; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapJunctions; type=bedRnaElements; md5sum=832f4ca83da9f9de535d070c5cd490f5; size=14M
wgEncodeCshlLongRnaSeqSknshCellPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapMinusRep3; type=bigWig; md5sum=4cbc334a22f012bc0f5c3e9fb8f0217a; size=151M
wgEncodeCshlLongRnaSeqSknshCellPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapMinusRep4; type=bigWig; md5sum=3fa778c9e3456fcc91eb0c1620d00af4; size=150M
wgEncodeCshlLongRnaSeqSknshCellPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapPlusRep3; type=bigWig; md5sum=2d8580c4e340ce92a501b400a849a148; size=154M
wgEncodeCshlLongRnaSeqSknshCellPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapPlusRep4; type=bigWig; md5sum=5d2329e0f91d5dd0f23c3f32631f15a3; size=153M
wgEncodeCshlLongRnaSeqSknshCellPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6897; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=7e88e5f753d09cf2369623869bc995dc; size=452K
wgEncodeCshlLongRnaSeqSknshCellPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6885; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=70b8fc4d0ab8560e1dfacff408669b82; size=459K
wgEncodeCshlLongRnaSeqSknshCellPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=7579063d8089b4f7c19e3e2ae79c837e; size=551M
wgEncodeCshlLongRnaSeqSknshCellPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=ba6931295548a1c0085752b33cf78a6e; size=306M
wgEncodeCshlLongRnaSeqSknshCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7430; geoSampleAccession=GSM981253; labExpId=LID46599,LID46598; bioRep=086WC,085WC; labProtocolId=086WC+,085WC+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=fe572fb35bd18a1f22ad9be62a2eb70d; size=2.0M
wgEncodeCshlLongRnaSeqSknshCellPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6363; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapTranscriptGencV10; type=gtf; md5sum=5184fb6d8c52aebb473fda1f94ead37e; size=5.1M
wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3; type=bam; md5sum=cb0f6b9216dbddf1038dba26ccb9cdd6; size=34G
wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3; type=bai; md5sum=817a4015b0ee5429014fda571309d2d4; size=9.8M
wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4; type=bam; md5sum=5053611fed33b39a913ec9e77e08aaca; size=32G
wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4; type=bai; md5sum=1cb6a432c7b6e8a7c9ea27191196c3f0; size=9.1M
wgEncodeCshlLongRnaSeqSknshCytosolPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6031; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapContigs; type=bedRnaElements; md5sum=5a87c5acfc47757ba6fcc59f23dfe2d3; size=15M
wgEncodeCshlLongRnaSeqSknshCytosolPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7001; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=631a1d0a5d531747fd01fac2faded756; size=18M
wgEncodeCshlLongRnaSeqSknshCytosolPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6377; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=98c016ccd5e71947cac7be915f632a9d; size=21M
wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=e8c6af47434651db83376459517c579e; size=21G
wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=57d5b931d8977e602eb3ee3a244de077; size=20G
wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=0a99bce432fc26d9b20c9343e07dd0ed; size=22G
wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=cfd5b23cad9426ede1f80803d238c611; size=20G
wgEncodeCshlLongRnaSeqSknshCytosolPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7417; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labProtocolId=085C+,086C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=31d4af25e3e9d66f6b2419a7ca0ae43d; size=1.4M
wgEncodeCshlLongRnaSeqSknshCytosolPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6377; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=9145cdd5da1fd130a2d8e2b0c8bb705a; size=1.9M
wgEncodeCshlLongRnaSeqSknshCytosolPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6050; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapJunctions; type=bedRnaElements; md5sum=60ce7beecb351aea185695697ad249dd; size=18M
wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep3; type=bigWig; md5sum=258be741a53b7da9bf7b86063462a2a4; size=156M
wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep4; type=bigWig; md5sum=381899e80396534bfc03d0e269457cf1; size=146M
wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep3; type=bigWig; md5sum=4a46a58fe2001bd62e39a119e6f98660; size=160M
wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep4; type=bigWig; md5sum=4155bf42fc171198a178d9bc1b30e02d; size=149M
wgEncodeCshlLongRnaSeqSknshCytosolPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6881; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=9e038dc7eb6cea4dabb563f7b51dbd5b; size=344K
wgEncodeCshlLongRnaSeqSknshCytosolPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6892; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=37bd8dc137c7df6ccad0a9e1b096d6d3; size=343K
wgEncodeCshlLongRnaSeqSknshCytosolPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=70b6eeaec95ac4dfa9c8a6dd1bae00ca; size=1.1G
wgEncodeCshlLongRnaSeqSknshCytosolPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=66c25b4034ab8cc61c097eb2a2361560; size=1.1G
wgEncodeCshlLongRnaSeqSknshCytosolPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7417; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labProtocolId=085C+,086C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=8b5d04f04ede3d842b5ddbaaf7f62007; size=1.9M
wgEncodeCshlLongRnaSeqSknshCytosolPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6377; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapTranscriptGencV10; type=gtf; md5sum=ee7c2f3d8a27b72ff95c3ef26a1fe41c; size=5.1M
wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3; type=bam; md5sum=46978634768e785865f045526fa58510; size=22G
wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3; type=bai; md5sum=51bbd9aa2616364dbe195bfd9d4773fe; size=9.0M
wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4; type=bam; md5sum=16ba38ac0553b1736a4628606c173c19; size=34G
wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4; type=bai; md5sum=7e294095bf5cba54a5df64d6b5e4ea73; size=11M
wgEncodeCshlLongRnaSeqSknshNucleusPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6029; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapContigs; type=bedRnaElements; md5sum=5be089f5512eb00e350391389bce257c; size=33M
wgEncodeCshlLongRnaSeqSknshNucleusPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6970; geoSampleAccession=GSM981250; labExpId=LID46597,LID46596; bioRep=086N,085N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=b9af929f530de841963ffc73f942a21e; size=20M
wgEncodeCshlLongRnaSeqSknshNucleusPapExonsGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6375; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=9981dbfb7ed4fb903c71a279883ed555; size=21M
wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd1Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b70a34e8c098a67790029163cbaa6e3e; size=13G
wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd1Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=acab5815f208a10c6838657b60c75c29; size=21G
wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd2Rep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=60a7f7e31205d4e04163030439155a19; size=13G
wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd2Rep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=c28839af3f46382a21c40a9d6d6d0f19; size=21G
wgEncodeCshlLongRnaSeqSknshNucleusPapGeneDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7425; geoSampleAccession=GSM981250; labExpId=LID46597,LID46596; bioRep=086N,085N; labProtocolId=086N+,085N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=8a1db8ff5ba73f1583aa246cf6458c22; size=4.8M
wgEncodeCshlLongRnaSeqSknshNucleusPapGeneGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6375; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=8102576d717a72ce68771c61b7f516ff; size=1.9M
wgEncodeCshlLongRnaSeqSknshNucleusPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6076; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapJunctions; type=bedRnaElements; md5sum=d6048475e9c8853ef807da2c27428b07; size=19M
wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep3; type=bigWig; md5sum=62af01f7981f61fd7753f6560397356b; size=236M
wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep4; type=bigWig; md5sum=242dd3d5697efad2831eeb8e3f9e60e5; size=376M
wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep3.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep3; type=bigWig; md5sum=9f199e486f3412daa7457d4b856d797c; size=243M
wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep4.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep4; type=bigWig; md5sum=8aa3f5e950e34669c294de8ddf404643; size=388M
wgEncodeCshlLongRnaSeqSknshNucleusPapProtocolRep3.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6903; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=2589e549931ba67a24ed436c1d21ecbf; size=342K
wgEncodeCshlLongRnaSeqSknshNucleusPapProtocolRep4.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6878; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=ad5d94a5f9b4a3a05d2a448d520e4e8d; size=354K
wgEncodeCshlLongRnaSeqSknshNucleusPapSpikeinsRep3.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=a823c860761129d6ac0a14c8f7a883f1; size=390M
wgEncodeCshlLongRnaSeqSknshNucleusPapSpikeinsRep4.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=477773b848acdb67d6fac1f29a36bb3e; size=735M
wgEncodeCshlLongRnaSeqSknshNucleusPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7425; geoSampleAccession=GSM981250; labExpId=LID46597,LID46596; bioRep=086N,085N; labProtocolId=086N+,085N+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=df54dacb56d9b7a5f69209b72c93d694; size=5.5M
wgEncodeCshlLongRnaSeqSknshNucleusPapTranscriptGencV10.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6375; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapTranscriptGencV10; type=gtf; md5sum=073b24e9a6ac7d267519ffb197481b33; size=5.2M
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1; type=bam; md5sum=afc08c3ec34d3d2c7213993e8193adb0; size=8.7G
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1; type=bai; md5sum=dfda9179413094075eaa5d1a4e8c3436; size=6.9M
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2; type=bam; md5sum=47dfec59d79373401f31dbd2397f3edc; size=9.4G
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2; type=bai; md5sum=c24b917e287d2a651b5d2928a8aee2ae; size=7.0M
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7e3f42d6e9eb19e7f73767b43d57ea99; size=5.7G
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6fb90b0765671fd5fa68f40fc25c9379; size=6.5G
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=349a1beace4244082274ed731b82070c; size=6.0G
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e411339277d4fa62665c20964f33b1d4; size=6.5G
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=4bfb0cc95929ca35156a9f3747f89c99; size=219M
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=e9f2d1edbdcfae981fd98d9a528e6c37; size=219M
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=848a8afab8d0f3029d0a6501575d9ade; size=223M
wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a7e343350ce3a309e44dd351b8555e23; size=223M
wgEncodeCshlLongRnaSeqSknshraCellPamContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPamContigs; type=bedRnaElements; md5sum=d7f55b52e877226cab531a1ea052c46d; size=19M
wgEncodeCshlLongRnaSeqSknshraCellPamExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6949; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=7604f09dabc4b7fe490fe5167dc5a3fa; size=13M
wgEncodeCshlLongRnaSeqSknshraCellPamExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4561; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b4fd1bf4b8b09f218df07f5379cc64c5; size=19M
wgEncodeCshlLongRnaSeqSknshraCellPamGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6a9ee2477dd1c3808767688853f42396; size=4.8M
wgEncodeCshlLongRnaSeqSknshraCellPamGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7455; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labProtocolId=019WC-,020WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e1b341d0546c59433031f1c6220960cc; size=7.5M
wgEncodeCshlLongRnaSeqSknshraCellPamGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4561; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bbb33b03d2c919da3c1d503de0bdc68a; size=2.1M
wgEncodeCshlLongRnaSeqSknshraCellPamJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPamJunctions; type=bedRnaElements; md5sum=4b91516304a1d65fe97fb87cdd74d47b; size=5.4M
wgEncodeCshlLongRnaSeqSknshraCellPamProtocolRep1.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f88ffbcc91f64a0f1114f1fae23114e8; size=355K
wgEncodeCshlLongRnaSeqSknshraCellPamProtocolRep2.pdf	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=89d93b6869b6255cdc4115e58774604c; size=357K
wgEncodeCshlLongRnaSeqSknshraCellPamSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4252; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8fa8d1d482a56a8939884ccb6969141b; size=598M
wgEncodeCshlLongRnaSeqSknshraCellPamSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4202; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=960479de28cd99105f529813e1c2bc6d; size=814M
wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bee65a7ef22acefd699375dd75160e07; size=24M
wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7455; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labProtocolId=019WC-,020WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=236350429b6b3fabece6492738807f15; size=8.0M
wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4561; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptGencV7; type=gtf; md5sum=c99e0678dd75482ca8cb29d575347a0e; size=4.9M
wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1; type=bam; md5sum=0d70a10ae21a37efca8da0cb8f2214eb; size=14G
wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1; type=bai; md5sum=3ea1a45855a75f20b2d58e5bae908845; size=7.8M
wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2; type=bam; md5sum=cb43a492248399d48b68011bcffafa23; size=13G
wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2; type=bai; md5sum=c72e29a304733c67a5bad8acdefe25f0; size=7.4M
wgEncodeCshlLongRnaSeqSknshraCellPapContigs.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapContigs; type=bedRnaElements; md5sum=047ea6a69d7b03dbbfbc080f7ca7775c; size=16M
wgEncodeCshlLongRnaSeqSknshraCellPapExonsDeNovo.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6950; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=db5b043f8f425ebf8f22d62735e22617; size=7.8M
wgEncodeCshlLongRnaSeqSknshraCellPapExonsGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4560; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=99e08ba11dbf2a6ca7e6a328e3da1c43; size=19M
wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd1Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c198fe98456dd83f6fb399abfd16ae8a; size=8.0G
wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd1Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9d32da420fdebfbc1a8cedf37799ee8d; size=7.7G
wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd2Rep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd2Rep1; dccAccession=wgEncodeEH000169; dccInternalNotes=Errata: CSHL reports this file is missing one lane of reads; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=804ba3c53d6bd04031329ee9690a3a2c; size=5.3G
wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd2Rep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8b102240e3d5d94de294c410c7210b62; size=7.7G
wgEncodeCshlLongRnaSeqSknshraCellPapGeneDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b2bce60357dca9a286371580150acc1a; size=2.0M
wgEncodeCshlLongRnaSeqSknshraCellPapGeneDeNovoV2.gff.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7454; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labProtocolId=019WC+,020WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b1119a031041ba214bdc10214d031e72; size=2.1M
wgEncodeCshlLongRnaSeqSknshraCellPapGeneGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4560; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4abe046dc78b3b988ee949ab1628de17; size=2.1M
wgEncodeCshlLongRnaSeqSknshraCellPapJunctions.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapJunctions; type=bedRnaElements; md5sum=e31850dce05aed1b9c5af119324301d2; size=11M
wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep1; type=bigWig; md5sum=250059784d71c423b9e6fa01f864b192; size=913M
wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep2; type=bigWig; md5sum=f55bd95896ae0058f7bcc00fcf0770c6; size=825M
wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep1.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep1; type=bigWig; md5sum=753de84bc84697c4ba819a206455186f; size=938M
wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep2.bigWig	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep2; type=bigWig; md5sum=fdf1664d0e554bee241e27846d685573; size=848M
wgEncodeCshlLongRnaSeqSknshraCellPapProtocolRep1.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b2f6c9a11df513a66de35fc98c6b7087; size=644K
wgEncodeCshlLongRnaSeqSknshraCellPapProtocolRep2.pdf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=72efdf9fd92abfb3d5027ebf3f01c110; size=641K
wgEncodeCshlLongRnaSeqSknshraCellPapSpikeinsRep1.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4282; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=90c0448aacae8141cbe9c2ab10e4e7b2; size=163M
wgEncodeCshlLongRnaSeqSknshraCellPapSpikeinsRep2.spikeins	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4232; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2e0aec43443d57a6388c36176344a756; size=163M
wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptDeNovo.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ea8c3da2eef928536ad9fab4101a4215; size=19M
wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptDeNovoV2.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7454; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labProtocolId=019WC+,020WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bcf4f9757bba4d4cbb9a19e72d38f75a; size=2.5M
wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4560; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptGencV7; type=gtf; md5sum=d7d81dfe138e77b9b0b87b7575688391; size=5.1M