ALPHABET: A C G T 
ORDER: 0
SUBST_MOD: REV
TRAINING_LNL: -988246.132962
BACKGROUND: 0.295 0.205 0.205 0.295
RATE_MAT:
  -1.165221    0.315494    0.589884    0.259843 
   0.189778   -0.878194    0.208718    0.479698 
   0.444622    0.261535   -0.885604    0.179447 
   0.234867    0.720815    0.215191   -1.170872 
TREE: (((((((((((((hg18:0.006690,panTro1:0.007571):0.024272,(colobus_monkey:0.015404,(baboon:0.008258,rheMac2:0.028617):0.008519):0.022120):0.023960,(dusky_titi:0.025662,(owl_monkey:0.012151,marmoset:0.029549):0.008236):0.027158):0.066101,(mouse_lemur:0.059024,galago:0.121375):0.032386):0.017073,((rn4:0.081728,mm8:0.077017):0.229273,oryCun1:0.206767):0.023340):0.023026,(((bosTau2:0.159182,canFam2:0.147731):0.004946,rfbat:0.138877):0.010150,(hedgehog:0.193396,shrew:0.261724):0.054246):0.024354):0.028505,dasNov1:0.149862):0.015994,(loxAfr1:0.104891,echTel1:0.259797):0.040371):0.218400,monDom4:0.371073):0.065268,platypus:0.468116):0.123856,galGal2:0.454691):0.123297,xenTro1:0.782453):0.156067,((tetNig1:0.199381,fr1:0.239894):0.492961,danRer3:0.782561):0.156067);