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size=1022M wgEncodeYaleChIPseqRawDataRep1Gm12891InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1111; setType=input; controlId=GM12891/None/Input/IgG-rab; type=fastq; md5sum=e3cdc7509abcdb465db6b1cb6cca1ef4; size=511M wgEncodeYaleChIPseqRawDataRep1Gm12891MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=863; setType=input; controlId=GM12891/None/Input/IgG-mus; type=fastq; md5sum=8d989e1076d9c502cb458db26de03c5a; size=405M wgEncodeYaleChIPseqRawDataRep1Gm12891NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1051; setType=exp; controlId=GM12891/None/Input/IgG-rab; labVersion=Data paired with GM12891_IgG_Control.; type=fastq; md5sum=e90e6b3d8488c6ae39552f0f4e2a8a85; size=856M wgEncodeYaleChIPseqRawDataRep1Gm12891Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=865; setType=exp; controlId=GM12891/None/Input/IgG-mus; labVersion=Data paired with GM12891_IgG_Control.; type=fastq; md5sum=6d71f4be9cff78bc0dd9e0df365d74fd; size=661M wgEncodeYaleChIPseqRawDataRep1Gm12892InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1110; setType=input; controlId=GM12892/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=ed89902c8842842aafc6e37ca70f5970; size=140M wgEncodeYaleChIPseqRawDataRep1Gm12892MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=959; setType=input; controlId=GM12892/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=4871b994ee9cf568e255d5cb89ca416e; size=185M wgEncodeYaleChIPseqRawDataRep1Gm12892NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=941; setType=exp; controlId=GM12892/None/Input/IgG-rab; labVersion=Data paired with IgG_Control; type=fastq; md5sum=ee8e125ac1d03559c79b40dd468ee32c; size=252M wgEncodeYaleChIPseqRawDataRep1Gm12892Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1008; setType=exp; controlId=GM12892/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; type=fastq; md5sum=188bf65572172447a0edbe666995330d; size=295M wgEncodeYaleChIPseqRawDataRep1Gm15510InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1112; setType=input; controlId=GM15510/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=a24b457e2a437cc740918ede2365ab38; size=166M wgEncodeYaleChIPseqRawDataRep1Gm15510MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=996; setType=input; controlId=GM15510/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=d93b29db3fc416d449c8b74580b6a2f9; size=816M wgEncodeYaleChIPseqRawDataRep1Gm15510NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1052; setType=exp; controlId=GM15510/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; type=fastq; md5sum=7a5dbc83b53c97a099a69a8af16d75bd; size=360M wgEncodeYaleChIPseqRawDataRep1Gm15510Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=997; setType=exp; controlId=GM15510/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; type=fastq; md5sum=db76628c826427937ecf3a15c211f75a; size=156M wgEncodeYaleChIPseqRawDataRep1Gm18505InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1113; setType=input; controlId=GM18505/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=22b0ca46f741620eba9fbefee1c5f543; size=167M wgEncodeYaleChIPseqRawDataRep1Gm18505MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1020; setType=input; controlId=GM18505/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=5646d0d0bb1e9aa1f8904fade41b9411; size=164M wgEncodeYaleChIPseqRawDataRep1Gm18505NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=945; setType=exp; controlId=GM18505/None/Input/IgG-rab; labVersion=Data paired with GM18505_IgG_Control; type=fastq; md5sum=10bc134d4c5675ce9ae169505ad1d0b7; size=423M wgEncodeYaleChIPseqRawDataRep1Gm18505Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1016; setType=exp; controlId=GM18505/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; type=fastq; md5sum=36679d52ff6424d0b95cdedee4446cf6; size=502M wgEncodeYaleChIPseqRawDataRep1Gm18526InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1114; setType=input; controlId=GM18526/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=38174eb36389d5c2808b0fa38813233c; size=161M wgEncodeYaleChIPseqRawDataRep1Gm18526MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1025; setType=input; controlId=GM18526/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=e2dd1a70909c6507ba0192d135a06845; size=136M wgEncodeYaleChIPseqRawDataRep1Gm18526NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=942; setType=exp; controlId=GM18526/None/Input/IgG-rab; labVersion=Data paired with GM18526_IgG_Control; type=fastq; md5sum=55b2bc3c3fc0f7321ccc57a72b46a11f; size=369M wgEncodeYaleChIPseqRawDataRep1Gm18526Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1024; setType=exp; controlId=GM18526/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; type=fastq; md5sum=9c7fbc64eaf772d204855a0884a23efe; size=139M wgEncodeYaleChIPseqRawDataRep1Gm18951InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1115; setType=input; controlId=GM18951/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=e52b61bdfdc83db5e41981c6d491a881; size=170M wgEncodeYaleChIPseqRawDataRep1Gm18951MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1044; setType=input; controlId=GM18951/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=bab013ccb2306f755ecfcd3458592e88; size=655M wgEncodeYaleChIPseqRawDataRep1Gm18951NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1053; setType=exp; controlId=GM18951/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; type=fastq; md5sum=e95c8c67adb9360168e1c6641f4588fb; size=136M wgEncodeYaleChIPseqRawDataRep1Gm18951Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1029; setType=exp; controlId=GM18951/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded.; type=fastq; md5sum=75eea6882be70c64a087ee3eb92b7a07; size=212M wgEncodeYaleChIPseqRawDataRep1Gm19099InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1116; setType=input; controlId=GM19099/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=152899248e9843add6ec6285d9d6d951; size=171M wgEncodeYaleChIPseqRawDataRep1Gm19099MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1045; setType=input; controlId=GM19099/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=97229c01f7392093fa36d6d7349a4ab1; size=193M wgEncodeYaleChIPseqRawDataRep1Gm19099NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=946; setType=exp; controlId=GM19099/None/Input/IgG-rab; labVersion=Data paired with GM19099_IgG_Control; type=fastq; md5sum=949a7645ce37e812a36ed91ae70b7712; size=357M wgEncodeYaleChIPseqRawDataRep1Gm19099Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1046; setType=exp; controlId=GM19099/None/Input/IgG-mus; labVersion=llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; type=fastq; md5sum=416d1d57b59e5c99f358c73b6aa076ef; size=192M wgEncodeYaleChIPseqRawDataRep1Gm19193InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1117; setType=input; controlId=GM19193/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=cf0762ef384f6f2208bfc2445d3f8cda; size=161M wgEncodeYaleChIPseqRawDataRep1Gm19193MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Input; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1047; setType=input; controlId=GM19193/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=0d4750d0ea257bf509af304b00b40915; size=246M wgEncodeYaleChIPseqRawDataRep1Gm19193NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=NFKB; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=947; setType=exp; controlId=GM19193/None/Input/IgG-rab; labVersion=Data paired with GM19193_IgG_Control; type=fastq; md5sum=86cbd89304918bc63a43409003a5ea3c; size=368M wgEncodeYaleChIPseqRawDataRep1Gm19193Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Pol2; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1048; setType=exp; controlId=GM19193/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; type=fastq; md5sum=d44e02889f161c26feca1b83003254c9; size=142M wgEncodeYaleChIPseqRawDataRep1Hct116Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HCT-116; treatment=None; antibody=Pol2; control=UCDavis; replicate=1; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-05-15; dateUnrestricted=2010-02-15; subId=333; setType=exp; controlId=HCT-116/None/Input/UCDavis; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=8819c477c1800c7dd2568cabec25c905; size=356M wgEncodeYaleChIPseqRawDataRep1Hct116Tcf4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HCT-116; treatment=None; antibody=TCF4; control=UCDavis; replicate=1; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=225; setType=exp; controlId=HCT-116/None/Input/UCDavis; labVersion=Fragmented using Bioruptor, precipitated with protein G magnetic beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=a2c2f1f6b80336dc6c33b899ba6c9495; size=345M wgEncodeYaleChIPseqRawDataRep1Hek293Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HEK293; treatment=None; antibody=Pol2; control=std; replicate=1; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=192; setType=exp; controlId=HEK293/None/Input/std; type=fastq; md5sum=6ae41a20528139d4b9304d3329a9101c; size=133M wgEncodeYaleChIPseqRawDataRep1Helas3Ap2alpha.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=AP-2alpha; control=std; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-24; dateUnrestricted=2010-06-23; subId=536; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=1bab468ade8700943299ff150e714c61; size=412M wgEncodeYaleChIPseqRawDataRep1Helas3Ap2gamma.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=AP-2gamma; control=std; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-24; dateUnrestricted=2010-06-23; subId=537; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=84da1f6a4b3efd56aaa199f7e4779a67; size=826M wgEncodeYaleChIPseqRawDataRep1Helas3Baf155Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BAF155; control=IgG-mus; 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dateSubmitted=2009-09-28; dateUnrestricted=2010-06-28; subId=553; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=88dcf69e7a285d4e0fc0603ce57984a0; size=665M wgEncodeYaleChIPseqRawDataRep1Helas3Ini1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Ini1; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=892; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. 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cell=HeLa-S3; treatment=None; antibody=Nrf1; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=999; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Data set paired with HeLa-S3_MouseIgG_Control.; type=fastq; md5sum=44e277cfd1ce7d648105d810dd14322b; size=829M wgEncodeYaleChIPseqRawDataRep1Helas3Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Pol2; control=std; replicate=1; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-10-31; dateUnrestricted=2009-07-31; subId=12; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=760d916257cec121d4dd9b97805a2f23; size=247M wgEncodeYaleChIPseqRawDataRep1Helas3Rabigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Input; control=IgG-rab; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1030; setType=input; controlId=HeLa-S3/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=b81c18fadb8c64a1bd5a86b7d42f41d8; size=1.6G wgEncodeYaleChIPseqRawDataRep1Helas3Rpc155.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=RPC155; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1082; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=1c81230eab18f2e34b367a4cca7e74df; size=1007M wgEncodeYaleChIPseqRawDataRep1Helas3Tfiiic.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=TFIIIC-110; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1077; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=100af29a366ef1918dc0116d5c2b172b; size=1.1G wgEncodeYaleChIPseqRawDataRep1Helas3Tr4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=TR4; control=std; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-24; dateUnrestricted=2010-06-24; subId=538; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=bc78ae473a0acadb8e3be742f183e3a1; size=768M wgEncodeYaleChIPseqRawDataRep1Helas3ifngStat1.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=IFNg30; antibody=STAT1; control=std; replicate=1; dataVersion=ENCODE Nov 2008 Freeze; 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Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=484e7a8750418eb147b71c7890f17eb1; size=147M wgEncodeYaleChIPseqRawDataRep1Hepg2Hsf1Forskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=HSF1; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1069; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=fe41a233775cdd68df617a0684d9f854; size=184M wgEncodeYaleChIPseqRawDataRep1Hepg2Input.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=Input; control=std; replicate=1; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=240; setType=input; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=76acb840e4859c581e37ee3025b3c1f0; size=50M wgEncodeYaleChIPseqRawDataRep1Hepg2Pgc1aForskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=PGC1A; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1071; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=31c6d133b80a6cbbff2e4c403b4e80ae; size=236M wgEncodeYaleChIPseqRawDataRep1Hepg2Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=Pol2; control=std; replicate=1; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=241; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=ca5b04b6dac6d30cd57f88a52f6b3455; size=62M wgEncodeYaleChIPseqRawDataRep1Hepg2Pol2Forskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=Pol2; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1072; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=f1f8924d0a650a05c5c9568f007700e9; size=216M wgEncodeYaleChIPseqRawDataRep1Hepg2Srebp1a.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=SREBP1; control=std; replicate=1; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=242; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=174102337760f2fa0d0f8f87109dba46; size=84M wgEncodeYaleChIPseqRawDataRep1Hepg2Srebp1aInsln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=insulin; antibody=SREBP1; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1073; setType=exp; controlId=HepG2/insulin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Insulin_Control.; type=fastq; md5sum=ae46ee4dc3fdd388825f82525f5c9f19; size=115M wgEncodeYaleChIPseqRawDataRep1Hepg2Srebp2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=SREBP2; control=std; replicate=1; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=243; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=99d0f2d92d0fe8d4a2259acd5ab2124c; size=71M wgEncodeYaleChIPseqRawDataRep1Hepg2bTr4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=None; antibody=TR4; control=UCDavis; replicate=1; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-12; dateUnrestricted=2010-03-11; subId=372; setType=exp; controlId=HepG2b/None/Input/UCDavis; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=1002a7136afacb93381ab1700f1ff101; size=301M wgEncodeYaleChIPseqRawDataRep1HuvecCjun.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=c-Jun; control=std; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-11; subId=995; setType=exp; controlId=HUVEC/None/Input/std; type=fastq; md5sum=c39f4d76e27f3c94eb4b92c1fcc304ce; size=607M wgEncodeYaleChIPseqRawDataRep1HuvecInputStd.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=Input; control=std; replicate=1; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-08; dateUnrestricted=2010-12-08; subId=1118; setType=input; controlId=HUVEC/None/Input/std; type=fastq; md5sum=18d1307b1bfddaae0f9750dfd7d7792e; size=1.3G wgEncodeYaleChIPseqRawDataRep1HuvecMax.fastq.gz project=wgEncode; 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view=RawData; cell=K562; treatment=None; antibody=ATF3; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-09; dateUnrestricted=2010-10-09; subId=951; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=439c941c937f3cc9f430f45015447055; size=411M wgEncodeYaleChIPseqRawDataRep1K562Bdp1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BDP1; control=std; replicate=1; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-22; dateUnrestricted=2010-03-22; subId=383; setType=exp; controlId=K562/None/Input/std; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; type=fastq; md5sum=5746bf3784e9071760dade1f9a682202; size=523M wgEncodeYaleChIPseqRawDataRep1K562Brf1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BRF1; control=std; replicate=1; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-22; dateUnrestricted=2010-03-22; subId=384; setType=exp; controlId=K562/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; type=fastq; md5sum=11ad8cb0f7853431a6b85b8535da3bc5; size=216M wgEncodeYaleChIPseqRawDataRep1K562Brf2.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BRF2; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1083; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=e73cba10b39583ddf532c96efc11cc88; size=524M wgEncodeYaleChIPseqRawDataRep1K562Brg1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=Brg1; control=IgG-mus; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=893; setType=exp; controlId=K562/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; type=fastq; md5sum=00dc0db379eb90a20f44b9494b440acf; size=425M wgEncodeYaleChIPseqRawDataRep1K562Cfos.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=c-Fos; control=std; replicate=1; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=68; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=622a5bb15af0ec9f1bc03c69f7eb556f; size=168M wgEncodeYaleChIPseqRawDataRep1K562Cjun.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=c-Jun; control=std; replicate=1; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=72; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=a3a7b2296e7f8be7496fa5fbb49db9d7; size=294M wgEncodeYaleChIPseqRawDataRep1K562Cmyc.fastq.gz project=wgEncode; 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type=fastq; md5sum=6f60cb47cc4d2c33e04387ed475c7fdb; size=268M wgEncodeYaleChIPseqRawDataRep1K562Ifng30Cjun.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg30; antibody=c-Jun; control=std; replicate=1; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-11; dateUnrestricted=2010-03-11; subId=373; setType=exp; controlId=K562/IFNg30/Input/std; type=fastq; md5sum=74b7d26cc18e392b830f5da46be6156a; size=509M wgEncodeYaleChIPseqRawDataRep1K562Ifng30Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg30; antibody=Pol2; control=std; replicate=1; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-11; dateUnrestricted=2010-10-11; subId=974; setType=exp; controlId=K562/IFNg30/Input/std; type=fastq; md5sum=acaee6463c6f703cc569f192301f160a; size=416M wgEncodeYaleChIPseqRawDataRep1K562Ifng6hCjun.fastq.gz project=wgEncode; 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Data paired with GM12878_IgG_Control.; type=fastq; md5sum=286d0a3bb659e46ae55bffd211f85a03; size=180M wgEncodeYaleChIPseqRawDataRep2Gm12878Pol2V3.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=Pol2; control=std; replicate=2; submittedDataVersion=V3 - Includes previously missing sequence data; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2009-02-24; dateResubmitted=2010-04-28; dateUnrestricted=2009-11-24; subId=1183; setType=exp; controlId=GM12878/None/Input/std; type=fastq; md5sum=fb27f4fabca1f8d01af97a6dcdc257bb; size=933M wgEncodeYaleChIPseqRawDataRep2Gm12878Pol3.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=Pol3; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-05-05; dateUnrestricted=2010-02-04; subId=318; setType=exp; controlId=GM12878/None/Input/std; labVersion=Incomplete fastq due to Illumina pipeline version; type=fastq; md5sum=fd4810431b7594cd2e071014d54b0a86; size=120M wgEncodeYaleChIPseqRawDataRep2Gm12878Rad21Iggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=Rad21; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1076; setType=exp; controlId=GM12878/None/Input/IgG-rab; type=fastq; md5sum=5b537d7b582f9328fee601c299379aa8; size=669M wgEncodeYaleChIPseqRawDataRep2Gm12878Tr4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=TR4; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-07; dateUnrestricted=2010-10-07; subId=900; setType=exp; controlId=GM12878/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA PeakSeq 1.0 (fdr 0.001), samples were 71% and 72% matching in the top 40% overlap analysis.; type=fastq; md5sum=d98f6eeee0f015b32273fc58128fef65; size=910M wgEncodeYaleChIPseqRawDataRep2Gm12878Yy1.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=YY1; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2009-12-20; dateUnrestricted=2010-09-19; subId=853; setType=exp; controlId=GM12878/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with Staph A,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=c4f5e75a74a7f345ee17a19cb85f306f; size=630M wgEncodeYaleChIPseqRawDataRep2Gm12878Zzz3.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=ZZZ3; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-08; dateUnrestricted=2010-10-08; subId=933; setType=exp; controlId=GM12878/None/Input/std; type=fastq; md5sum=4a6a0d6cea1c5117a6202bb59061c882; size=890M wgEncodeYaleChIPseqRawDataRep2Gm12891InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1111; setType=input; controlId=GM12891/None/Input/IgG-rab; type=fastq; md5sum=f40b253cf7c100c04db10a76f281f8a3; size=420M wgEncodeYaleChIPseqRawDataRep2Gm12891MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=863; setType=input; controlId=GM12891/None/Input/IgG-mus; type=fastq; md5sum=fb0a18ab162c050e87690fa4d0ac5490; size=404M wgEncodeYaleChIPseqRawDataRep2Gm12891NfkbIggrab.fastq.gz project=wgEncode; 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grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1110; setType=input; controlId=GM12892/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=b76b5ccf83eaf96dcd5693b6391e2863; size=226M wgEncodeYaleChIPseqRawDataRep2Gm12892MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=959; setType=input; controlId=GM12892/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=7a2fa0bcc484d913ea7a337d31decaa6; size=314M wgEncodeYaleChIPseqRawDataRep2Gm12892NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=941; setType=exp; controlId=GM12892/None/Input/IgG-rab; labVersion=Data paired with IgG_Control; type=fastq; md5sum=87321e8d9e46fc61805bb4099e32b159; size=335M wgEncodeYaleChIPseqRawDataRep2Gm12892Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12892; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1008; setType=exp; controlId=GM12892/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12892_IgG_Control.; type=fastq; md5sum=db9872b87ad81bcf36ce42e21edea356; size=409M wgEncodeYaleChIPseqRawDataRep2Gm15510InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1112; setType=input; controlId=GM15510/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=f6dbeba4dbc728377465bceb82fff0c3; size=176M wgEncodeYaleChIPseqRawDataRep2Gm15510MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=996; setType=input; controlId=GM15510/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=45c69d9642763e4a6f608e972b54f6b8; size=168M wgEncodeYaleChIPseqRawDataRep2Gm15510NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1052; setType=exp; controlId=GM15510/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; type=fastq; md5sum=362f8398c91f2849c9042d7091bcc2fd; size=278M wgEncodeYaleChIPseqRawDataRep2Gm15510Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=997; setType=exp; controlId=GM15510/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; type=fastq; md5sum=d4aa580f76fb7e41410709729ebd5a63; size=169M wgEncodeYaleChIPseqRawDataRep2Gm18505InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1113; setType=input; controlId=GM18505/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=f374a2ace4712236bf0542de6c256c30; size=220M wgEncodeYaleChIPseqRawDataRep2Gm18505MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1020; setType=input; controlId=GM18505/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=aa4a40decc1c5e79b70c84962bc4e0c5; size=180M wgEncodeYaleChIPseqRawDataRep2Gm18505NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=945; setType=exp; controlId=GM18505/None/Input/IgG-rab; labVersion=Data paired with GM18505_IgG_Control; type=fastq; md5sum=3aa4d89a251799819e20d7fe36370000; size=335M wgEncodeYaleChIPseqRawDataRep2Gm18505Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1016; setType=exp; controlId=GM18505/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; type=fastq; md5sum=b43b41b049753d687d6ad4f0a3556a7e; size=433M wgEncodeYaleChIPseqRawDataRep2Gm18526InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1114; setType=input; controlId=GM18526/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=a2bd14603bdc9a540f7dbdd76656c08e; size=134M wgEncodeYaleChIPseqRawDataRep2Gm18526MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1025; setType=input; controlId=GM18526/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=1f1358a56014b83369d87405c105edc9; size=205M wgEncodeYaleChIPseqRawDataRep2Gm18526NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=942; setType=exp; controlId=GM18526/None/Input/IgG-rab; labVersion=Data paired with GM18526_IgG_Control; type=fastq; md5sum=4e4a76bec0d7756184065cde525ddd56; size=314M wgEncodeYaleChIPseqRawDataRep2Gm18526Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1024; setType=exp; controlId=GM18526/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; type=fastq; md5sum=c484bbaf5da6e6dc9c5241453b595215; size=123M wgEncodeYaleChIPseqRawDataRep2Gm18951InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1115; setType=input; controlId=GM18951/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=3290805e56ac853b6353b6122aa7a218; size=154M wgEncodeYaleChIPseqRawDataRep2Gm18951NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1053; setType=exp; controlId=GM18951/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; type=fastq; md5sum=66ac00b2901f33e2ae1aaef7b82c3170; size=714M wgEncodeYaleChIPseqRawDataRep2Gm18951Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1029; setType=exp; controlId=GM18951/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded.; type=fastq; md5sum=961f4230b8f0fc1b47755e71ff38c2d4; size=205M wgEncodeYaleChIPseqRawDataRep2Gm19099InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1116; setType=input; controlId=GM19099/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=309c1c0e05ab4f5babd68f45215d4891; size=142M wgEncodeYaleChIPseqRawDataRep2Gm19099MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1045; setType=input; controlId=GM19099/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=892dc91f24f93cf540bf82d0829043a1; size=337M wgEncodeYaleChIPseqRawDataRep2Gm19099NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=946; setType=exp; controlId=GM19099/None/Input/IgG-rab; labVersion=Data paired with GM19099_IgG_Control; type=fastq; md5sum=54f938aa6ad085a620fa5bd82de183a6; size=790M wgEncodeYaleChIPseqRawDataRep2Gm19099Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1046; setType=exp; controlId=GM19099/None/Input/IgG-mus; labVersion=llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; type=fastq; md5sum=321ccde87e953eb1b1bfca95b9053b7a; size=154M wgEncodeYaleChIPseqRawDataRep2Gm19193InputIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Input; control=IgG-rab; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-05; dateUnrestricted=2010-12-05; subId=1117; setType=input; controlId=GM19193/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=86bf2e4e73fa8f2360c3aeb0fe7439c4; size=164M wgEncodeYaleChIPseqRawDataRep2Gm19193MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1047; setType=input; controlId=GM19193/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=a8d8398521071758c7b90570d4fd8581; size=175M wgEncodeYaleChIPseqRawDataRep2Gm19193NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=NFKB; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=947; setType=exp; controlId=GM19193/None/Input/IgG-rab; labVersion=Data paired with GM19193_IgG_Control; type=fastq; md5sum=24a1ac37415fd9234382ae6fba6c22bf; size=706M wgEncodeYaleChIPseqRawDataRep2Gm19193Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Pol2; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1048; setType=exp; controlId=GM19193/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; type=fastq; md5sum=8cb52a75367019b16c8437fbbbffa535; size=635M wgEncodeYaleChIPseqRawDataRep2Hct116Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HCT-116; treatment=None; antibody=Pol2; control=UCDavis; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-05-15; dateUnrestricted=2010-02-15; subId=333; setType=exp; controlId=HCT-116/None/Input/UCDavis; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads, PeakSeq 1.0 (fdr 0.001) Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=1efeba5cf210f9f63afea256188a855d; size=253M wgEncodeYaleChIPseqRawDataRep2Hct116Tcf4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HCT-116; treatment=None; antibody=TCF4; control=UCDavis; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=225; setType=exp; controlId=HCT-116/None/Input/UCDavis; labVersion=Fragmented using Bioruptor, precipitated with protein G magnetic beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=2f66ec99b251c1e844c786cfc8b85d5a; size=183M wgEncodeYaleChIPseqRawDataRep2Hek293Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HEK293; treatment=None; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=192; setType=exp; controlId=HEK293/None/Input/std; type=fastq; md5sum=ef9fd4f5886177ca06897c8876da1784; size=70M wgEncodeYaleChIPseqRawDataRep2Helas3Ap2alpha.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=AP-2alpha; control=std; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-24; dateUnrestricted=2010-06-23; subId=536; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=db1efeefd5d4e41cd6a669e102d6835e; size=905M wgEncodeYaleChIPseqRawDataRep2Helas3Ap2gamma.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=AP-2gamma; control=std; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-24; dateUnrestricted=2010-06-23; subId=537; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=a6b7813dc5cd1828e1e9251852efd807; size=675M wgEncodeYaleChIPseqRawDataRep2Helas3Baf155Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BAF155; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=888; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Data paired with IgG_Control.; type=fastq; md5sum=d00277862b668817467b215cafbe1653; size=459M wgEncodeYaleChIPseqRawDataRep2Helas3Baf170Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BAF170; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=890; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Data paired with IgG_Control.; type=fastq; md5sum=16ec11174257b5414b5c1b12175a6153; size=525M wgEncodeYaleChIPseqRawDataRep2Helas3Bdp1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BDP1; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1078; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=46c672fc8a3202b02f3bec93d7473164; size=959M wgEncodeYaleChIPseqRawDataRep2Helas3Brf1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BRF1; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1086; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=526e319e8dcebe85db0a97110f97f06a; size=997M wgEncodeYaleChIPseqRawDataRep2Helas3Brf2.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BRF2; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1087; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=fb1082a7d095f8976f0d75f952373489; size=664M wgEncodeYaleChIPseqRawDataRep2Helas3Brg1Iggmus.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Brg1; control=IgG-mus; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-08; dateUnrestricted=2010-12-08; subId=1119; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=d23e1f06db21be8a3a440093ecdfb8a6; size=247M wgEncodeYaleChIPseqRawDataRep2Helas3Cfos.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=c-Fos; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-05-05; dateUnrestricted=2010-02-04; subId=315; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Contains incomplete fastq files; type=fastq; md5sum=e8428c0edeb02438269020e97178283e; size=187M wgEncodeYaleChIPseqRawDataRep2Helas3CjunRabigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=c-Jun; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1031; setType=exp; controlId=HeLa-S3/None/Input/IgG-rab; type=fastq; md5sum=fc72aa3eecf2731fb89190a65b63f776; size=681M wgEncodeYaleChIPseqRawDataRep2Helas3Cmyc.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=c-Myc; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-05-05; dateUnrestricted=2010-02-04; subId=316; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Contains incomplete fastq files; type=fastq; md5sum=ed10a3f66fffc0b3534d3cadd6caa900; size=309M wgEncodeYaleChIPseqRawDataRep2Helas3E2f1.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=E2F1; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-08; dateUnrestricted=2010-10-08; subId=928; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, precipitated with StaphA and an antibody to E2F1,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=3d8372e658e5788ce0332e9a024b524e; size=690M wgEncodeYaleChIPseqRawDataRep2Helas3E2f4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=E2F4; control=std; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-29; dateUnrestricted=2010-06-29; subId=587; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=493a93d8319e57be996bb3dac3ec7fd9; size=863M wgEncodeYaleChIPseqRawDataRep2Helas3E2f6.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=E2F6; control=std; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-10-21; dateUnrestricted=2010-07-20; subId=739; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with StaphA; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=5585c9b8390a8b4250d6b26b1dcf0747; size=571M wgEncodeYaleChIPseqRawDataRep2Helas3Ha.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=HA-E2F1; control=std; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-28; dateUnrestricted=2010-06-28; subId=553; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=HeLa cells stably expressed a tagged HA-E2F1 were fragmented using a Bioruptor, precipitated with StaphA and an antibody to the HA tag,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=ee78067714d68dfb533c7dbe8b6335b7; size=259M wgEncodeYaleChIPseqRawDataRep2Helas3Ini1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Ini1; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=892; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; type=fastq; md5sum=7894cade8688dbace4f30a77f3189f67; size=415M wgEncodeYaleChIPseqRawDataRep2Helas3JundRabigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=JunD; control=IgG-rab; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1032; setType=exp; controlId=HeLa-S3/None/Input/IgG-rab; type=fastq; md5sum=88d81ed2249516e01048c9604a798f50; size=677M wgEncodeYaleChIPseqRawDataRep2Helas3Largefragment.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Input; control=Large_Fragment; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=193; setType=input; controlId=HeLa-S3/None/Input/Large_Fragment; type=fastq; md5sum=4afd848063bb992d3a5e19effa66fa32; size=322M wgEncodeYaleChIPseqRawDataRep2Helas3Max.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Max; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-05-05; dateUnrestricted=2010-02-04; subId=317; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Contains incomplete fastq files; type=fastq; md5sum=cbe16d517185466752964fa68952c64a; size=220M wgEncodeYaleChIPseqRawDataRep2Helas3Mnase.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Input; control=MNase; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=194; setType=input; controlId=HeLa-S3/None/Input/MNase; type=fastq; md5sum=a2c06d2da34e163c8fbd014ef2f69436; size=332M wgEncodeYaleChIPseqRawDataRep2Helas3Mouseigg.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Input; control=IgG-mus; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=195; setType=input; controlId=HeLa-S3/None/Input/IgG-mus; type=fastq; md5sum=a11747b6bde11346a6589d9421c5ffb5; size=422M wgEncodeYaleChIPseqRawDataRep2Helas3Nakeddna.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Input; control=Naked_DNA; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=196; setType=input; controlId=HeLa-S3/None/Input/Naked_DNA; type=fastq; md5sum=a6de181cef96d8e8258a4a95f93f525e; size=291M wgEncodeYaleChIPseqRawDataRep2Helas3Nrf1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Nrf1; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=999; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Data set paired with HeLa-S3_MouseIgG_Control.; type=fastq; md5sum=f860a42d13b1b3d198573bc1b31effd1; size=372M wgEncodeYaleChIPseqRawDataRep2Helas3Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-10-31; dateUnrestricted=2009-07-31; subId=12; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=5c42e3bff956a89a26afd500ddfd6f75; size=334M wgEncodeYaleChIPseqRawDataRep2Helas3Rpc155.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=RPC155; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1082; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=d35212fcc8601f02a77985f5db5ab663; size=982M wgEncodeYaleChIPseqRawDataRep2Helas3Tfiiic.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=TFIIIC-110; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1077; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=f38f103f84644790fd73b755dffe6abd; size=997M wgEncodeYaleChIPseqRawDataRep2Helas3Tr4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=TR4; control=std; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-09-24; dateUnrestricted=2010-06-24; subId=538; setType=exp; controlId=HeLa-S3/None/Input/std; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=53796e5760085bf7bcf5e2851f76fb26; size=750M wgEncodeYaleChIPseqRawDataRep2Helas3ifngStat1.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=IFNg30; antibody=STAT1; control=std; replicate=2; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-10-31; dateUnrestricted=2009-07-31; subId=13; setType=exp; controlId=HeLa-S3/IFNg30/Input/std; type=fastq; md5sum=8bf6cf76db56711865cfb7f04341ffd1; size=480M wgEncodeYaleChIPseqRawDataRep2Hepg2CebpbForskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=CEBPB; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1062; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=4941404cb1ba6f4e3982460c781aa346; size=157M wgEncodeYaleChIPseqRawDataRep2Hepg2ControlForskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=Input; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1066; setType=input; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=b363b1cbd04a3bea3c788cc710971250; size=153M wgEncodeYaleChIPseqRawDataRep2Hepg2ControlInsln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=insulin; antibody=Input; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1070; setType=input; controlId=HepG2/insulin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=2bd910f7223c501cc8127d3ac9a79fa7; size=94M wgEncodeYaleChIPseqRawDataRep2Hepg2ErraForskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=ERRA; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1063; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=d4776c05971f804df1905f7b5463a592; size=120M wgEncodeYaleChIPseqRawDataRep2Hepg2Grp20Forskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=GRp20; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1067; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=6c2acac26bfecdde4e3f70e703762049; size=172M wgEncodeYaleChIPseqRawDataRep2Hepg2Hnf4aForskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=HNF4A; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1068; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=0e64a2966f66527a6e9e9565e247984d; size=210M wgEncodeYaleChIPseqRawDataRep2Hepg2Hsf1Forskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=HSF1; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1069; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=f3d4a23151ca05e5d4e7644eecee4bb1; size=122M wgEncodeYaleChIPseqRawDataRep2Hepg2Input.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=Input; control=std; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=240; setType=input; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=2abd7c03e31be38acb757ecb8ed34a3f; size=107M wgEncodeYaleChIPseqRawDataRep2Hepg2Pgc1aForskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=PGC1A; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1071; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=ab001895e58f73b59e0b0219ae130ef5; size=143M wgEncodeYaleChIPseqRawDataRep2Hepg2Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=241; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=d362350be83c7d9713161f5a6954a151; size=111M wgEncodeYaleChIPseqRawDataRep2Hepg2Pol2Forskln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=forskolin; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1072; setType=exp; controlId=HepG2/forskolin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Forskolin_Control.; type=fastq; md5sum=5955f762607a4409dc5e0dc51f4c145e; size=99M wgEncodeYaleChIPseqRawDataRep2Hepg2Srebp1a.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=SREBP1; control=std; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=242; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=ebd6d711a4e88980e44e3efb66158800; size=123M wgEncodeYaleChIPseqRawDataRep2Hepg2Srebp1aInsln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=insulin; antibody=SREBP1; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1073; setType=exp; controlId=HepG2/insulin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Insulin_Control.; type=fastq; md5sum=f065e6b2f33f4dcc4af16aa8947f6d8b; size=91M wgEncodeYaleChIPseqRawDataRep2Hepg2Srebp2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=SREBP2; control=std; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=243; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=f5fc2c1019264dd848a4134b192fb3e4; size=117M wgEncodeYaleChIPseqRawDataRep2Hepg2bTr4.fastq.gz project=wgEncode; grant=Snyder; lab=USC; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=None; antibody=TR4; control=UCDavis; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-12; dateUnrestricted=2010-03-11; subId=372; setType=exp; controlId=HepG2b/None/Input/UCDavis; labVersion=Fragmented using Bioruptor, precipitated with protein A agarose beads,; softwareVersion=PeakSeq1.0 (fdr 0.001); type=fastq; md5sum=9e772f81822599a22253e3abf7e56a7d; size=542M wgEncodeYaleChIPseqRawDataRep2HuvecCjun.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=c-Jun; control=std; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-11; subId=995; setType=exp; controlId=HUVEC/None/Input/std; type=fastq; md5sum=0f573d5b31f798f033979c3986cd4ac7; size=920M wgEncodeYaleChIPseqRawDataRep2HuvecInputStd.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=Input; control=std; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-08; dateUnrestricted=2010-12-08; subId=1118; setType=input; controlId=HUVEC/None/Input/std; type=fastq; md5sum=ce48ffdaf2b0c60a979bc644e6ce7005; size=1.1G wgEncodeYaleChIPseqRawDataRep2HuvecMax.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=Max; control=std; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1085; setType=exp; controlId=HUVEC/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=b1a7fd5360e91b8403580bb868ed6c30; size=515M wgEncodeYaleChIPseqRawDataRep2HuvecPol2.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-01-09; dateUnrestricted=2010-10-08; subId=950; setType=exp; controlId=HUVEC/None/Input/std; type=fastq; md5sum=d12bcc2eb5b2e30bb68c7515d4463648; size=611M wgEncodeYaleChIPseqRawDataRep2K562Atf3.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=ATF3; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-09; dateUnrestricted=2010-10-09; subId=951; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=c611192a803de171681a0bb310ca01be; size=656M wgEncodeYaleChIPseqRawDataRep2K562Bdp1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BDP1; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-22; dateUnrestricted=2010-03-22; subId=383; setType=exp; controlId=K562/None/Input/std; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; type=fastq; md5sum=63175ee7a95f52a9cc7df9bf8848d18b; size=580M wgEncodeYaleChIPseqRawDataRep2K562Brf1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BRF1; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-22; dateUnrestricted=2010-03-22; subId=384; setType=exp; controlId=K562/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; type=fastq; md5sum=24cf38467a29f009d27f8077dd0bd481; size=158M wgEncodeYaleChIPseqRawDataRep2K562Brf2.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BRF2; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1083; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=506b83ebc3758b93828deae47a954f09; size=524M wgEncodeYaleChIPseqRawDataRep2K562Brg1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=Brg1; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=893; setType=exp; controlId=K562/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; type=fastq; md5sum=bb116828ee18c65159397e77d3433e0a; size=489M wgEncodeYaleChIPseqRawDataRep2K562Cfos.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=c-Fos; control=std; replicate=2; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=68; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=780a8f246a9e8a9cf7433e38da4dda3a; size=153M wgEncodeYaleChIPseqRawDataRep2K562Cjun.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=c-Jun; control=std; replicate=2; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=72; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=bd19566d51743e4fb662704d518ceba2; size=268M wgEncodeYaleChIPseqRawDataRep2K562Cmyc.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=c-Myc; control=std; replicate=2; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=69; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=b40e033b7d0bba1374acb2e4ee0c7a5f; size=167M wgEncodeYaleChIPseqRawDataRep2K562Gtf2b.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=GTF2B; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-11; dateUnrestricted=2010-10-11; subId=975; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=20f03c1cc1ac93c88fd9dc0e9c5490d5; size=476M wgEncodeYaleChIPseqRawDataRep2K562Ifna30Cmyc.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa30; antibody=c-Myc; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-08; dateUnrestricted=2010-03-08; subId=366; setType=exp; controlId=K562/IFNa30/Input/std; type=fastq; md5sum=7ee2d73df4b042bd396438a00e99a228; size=544M wgEncodeYaleChIPseqRawDataRep2K562Ifna30Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa30; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=370; setType=exp; controlId=K562/IFNa30/Input/std; type=fastq; md5sum=f3d7c25a7330574e834c11da9bdb469c; size=481M wgEncodeYaleChIPseqRawDataRep2K562Ifna30Stat1.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa30; antibody=STAT1; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=361; setType=exp; controlId=K562/IFNa30/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=6585ccd8b3af4e843440f9e251278e52; size=566M wgEncodeYaleChIPseqRawDataRep2K562Ifna30Stat2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa30; antibody=STAT2; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=363; setType=exp; controlId=K562/IFNa30/Input/std; type=fastq; md5sum=3c8deec46ced851837cc7e29762a2122; size=492M wgEncodeYaleChIPseqRawDataRep2K562Ifna6hCjun.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa6h; antibody=c-Jun; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=368; setType=exp; controlId=K562/IFNa6h/Input/std; type=fastq; md5sum=b529754e8aa20ec5c88e44464def032a; size=535M wgEncodeYaleChIPseqRawDataRep2K562Ifna6hCmyc.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa6h; antibody=c-Myc; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=367; setType=exp; controlId=K562/IFNa6h/Input/std; type=fastq; md5sum=f23015d997a2cadd0457219482dc4a2c; size=671M wgEncodeYaleChIPseqRawDataRep2K562Ifna6hPol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa6h; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=360; setType=exp; controlId=K562/IFNa6h/Input/std; type=fastq; md5sum=64858984304fa04a903d5482f4de8eac; size=618M wgEncodeYaleChIPseqRawDataRep2K562Ifna6hStat1.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa6h; antibody=STAT1; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=362; setType=exp; controlId=K562/IFNa6h/Input/std; type=fastq; md5sum=d07e36412c97ff92bfaaba96e8c00872; size=581M wgEncodeYaleChIPseqRawDataRep2K562Ifna6hStat2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNa6h; antibody=STAT2; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=364; setType=exp; controlId=K562/IFNa6h/Input/std; type=fastq; md5sum=3de3f6afc529871584b5c44fc84eb26b; size=513M wgEncodeYaleChIPseqRawDataRep2K562Ifng30Cjun.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg30; antibody=c-Jun; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-11; dateUnrestricted=2010-03-11; subId=373; setType=exp; controlId=K562/IFNg30/Input/std; type=fastq; md5sum=093e3c61fabba5398cb2fdc9297dc1ee; size=693M wgEncodeYaleChIPseqRawDataRep2K562Ifng30Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg30; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-11; dateUnrestricted=2010-10-11; subId=974; setType=exp; controlId=K562/IFNg30/Input/std; type=fastq; md5sum=f430034cb369e3faf8ed7309080d275a; size=731M wgEncodeYaleChIPseqRawDataRep2K562Ifng6hCjun.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg6h; antibody=c-Jun; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=369; setType=exp; controlId=K562/IFNg6h/Input/std; type=fastq; md5sum=5a8362a6945efefc662939d54f503fcb; size=705M wgEncodeYaleChIPseqRawDataRep2K562Ifng6hCmyc.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg6h; antibody=c-Myc; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=365; setType=exp; controlId=K562/IFNg6h/Input/std; type=fastq; md5sum=0b8b3540940dc2b044c1bf050bbb8dfa; size=679M wgEncodeYaleChIPseqRawDataRep2K562Ifng6hPol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=IFNg6h; antibody=Pol2; control=std; replicate=2; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-09; dateUnrestricted=2010-03-09; subId=359; setType=exp; controlId=K562/IFNg6h/Input/std; type=fastq; md5sum=ec10e7c29f6ee6f6a720e4d9fc133e8a; size=574M wgEncodeYaleChIPseqRawDataRep2K562Ini1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=Ini1; control=IgG-mus; replicate=2; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=894; setType=exp; controlId=K562/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; type=fastq; md5sum=0f41e9f05107a3bc8c02e5ad9c682863; size=520M wgEncodeYaleChIPseqRawDataRep2K562InputV2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=Input; control=std; replicate=2; submittedDataVersion=V2 - Replaced K562/Input used by Snyder and Struhl; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-02-25; dateResubmitted=2009-06-29; dateUnrestricted=2009-11-25; subId=390; setType=input; controlId=K562/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=081854edfb71f333a034d493de8a1f2e; size=464M wgEncodeYaleChIPseqRawDataRep2K562Jund.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=JunD; control=std; replicate=2; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; 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Data paired with GM12892_IgG_Control.; type=fastq; md5sum=a7ca7ccbe8864118ba600124b12a5653; size=190M wgEncodeYaleChIPseqRawDataRep3Gm15510NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=NFKB; control=IgG-rab; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1052; setType=exp; controlId=GM15510/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; type=fastq; md5sum=0fbeb39f22d4753f4a3135c5feac2cf0; size=176M wgEncodeYaleChIPseqRawDataRep3Gm15510Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=Pol2; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=997; setType=exp; controlId=GM15510/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM15510_IgG_Control.; type=fastq; md5sum=2cc3f44c30b70b57cae2e120b00e835d; size=122M wgEncodeYaleChIPseqRawDataRep3Gm18505NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=NFKB; control=IgG-rab; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=945; setType=exp; controlId=GM18505/None/Input/IgG-rab; labVersion=Data paired with GM18505_IgG_Control; type=fastq; md5sum=931ef7f794c4f8f9326f253984f304e8; size=627M wgEncodeYaleChIPseqRawDataRep3Gm18505Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Pol2; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1016; setType=exp; controlId=GM18505/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18505_IgG_Control.; type=fastq; md5sum=52f01b797094cc6c5f7ebe9853c310a2; size=191M wgEncodeYaleChIPseqRawDataRep3Gm18526MusiggMusigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Input; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1025; setType=input; controlId=GM18526/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=6c956cbfc45ad84812a9b4127d3bd9f5; size=622M wgEncodeYaleChIPseqRawDataRep3Gm18526NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=NFKB; control=IgG-rab; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=942; setType=exp; controlId=GM18526/None/Input/IgG-rab; labVersion=Data paired with GM18526_IgG_Control; type=fastq; md5sum=da3cfc82014f165134f49ae3d98b165d; size=159M wgEncodeYaleChIPseqRawDataRep3Gm18526Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18526; treatment=None; antibody=Pol2; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1024; setType=exp; controlId=GM18526/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; type=fastq; md5sum=5b6c909c7540e15244a0b022b1e119b3; size=141M wgEncodeYaleChIPseqRawDataRep3Gm18951NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=NFKB; control=IgG-rab; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1053; setType=exp; controlId=GM18951/None/Input/IgG-rab; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM18951_IgG_Control.; type=fastq; md5sum=9095467851bf05174053e83a56cd55c7; size=284M wgEncodeYaleChIPseqRawDataRep3Gm18951Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18951; treatment=None; antibody=Pol2; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1029; setType=exp; controlId=GM18951/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded.; type=fastq; md5sum=4ab0b66a4cea331800495a64c7f73f70; size=287M wgEncodeYaleChIPseqRawDataRep3Gm19099NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=NFKB; control=IgG-rab; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=946; setType=exp; controlId=GM19099/None/Input/IgG-rab; labVersion=Data paired with GM19099_IgG_Control; type=fastq; md5sum=e2566ed654191d359f273cf34e55bb73; size=353M wgEncodeYaleChIPseqRawDataRep3Gm19099Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19099; treatment=None; antibody=Pol2; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1046; setType=exp; controlId=GM19099/None/Input/IgG-mus; labVersion=llumina 2.0, low confidence sequences excluded. Data paired with GM19099_IgG_Control.; type=fastq; md5sum=0032468f039d0c7b3872e3c6144c8b35; size=695M wgEncodeYaleChIPseqRawDataRep3Gm19193NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=NFKB; control=IgG-rab; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=947; setType=exp; controlId=GM19193/None/Input/IgG-rab; labVersion=Data paired with GM19193_IgG_Control; type=fastq; md5sum=d1bf01bbd66417859bd1eb9466f2fb3c; size=183M wgEncodeYaleChIPseqRawDataRep3Gm19193Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM19193; treatment=None; antibody=Pol2; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1048; setType=exp; controlId=GM19193/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM19193_IgG_Control.; type=fastq; md5sum=b84ec356aa6154e0f591f7ae11deb512; size=485M wgEncodeYaleChIPseqRawDataRep3Hek293Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HEK293; treatment=None; antibody=Pol2; control=std; replicate=3; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=192; setType=exp; controlId=HEK293/None/Input/std; type=fastq; md5sum=f3c063d161fa9db21ba4c9971bb42257; size=77M wgEncodeYaleChIPseqRawDataRep3Helas3Baf155Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BAF155; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=888; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Data paired with IgG_Control.; type=fastq; md5sum=9853a52c4e6ec2a8ce36b8c20859b943; size=538M wgEncodeYaleChIPseqRawDataRep3Helas3Baf170Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=BAF170; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=890; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Data paired with IgG_Control.; type=fastq; md5sum=77ac5efe93b9597cd2d5fd020de3ee8e; size=556M wgEncodeYaleChIPseqRawDataRep3Helas3Brg1Iggmus.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Brg1; control=IgG-mus; replicate=3; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-03-08; dateUnrestricted=2010-12-08; subId=1119; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=ca0c104a9e437188c7616f6ebf36002f; size=227M wgEncodeYaleChIPseqRawDataRep3Helas3Ini1Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Ini1; control=IgG-mus; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=892; setType=exp; controlId=HeLa-S3/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with IgG_Control.; type=fastq; md5sum=ce0de0f25d25bf03680d25bc73fb5458; size=288M wgEncodeYaleChIPseqRawDataRep3Helas3Nakeddna.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Input; control=Naked_DNA; replicate=3; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-25; dateUnrestricted=2009-11-25; subId=196; setType=input; controlId=HeLa-S3/None/Input/Naked_DNA; type=fastq; md5sum=364e0b43a340442be4e116df2615d643; size=277M wgEncodeYaleChIPseqRawDataRep3Helas3Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HeLa-S3; treatment=None; antibody=Pol2; control=std; replicate=3; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-10-31; dateUnrestricted=2009-07-31; subId=12; setType=exp; controlId=HeLa-S3/None/Input/std; type=fastq; md5sum=bdea28b9f3af6cdf252c55b11955ff5e; size=345M wgEncodeYaleChIPseqRawDataRep3Hepg2Input.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=Input; control=std; replicate=3; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=240; setType=input; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=3f7311f2af21a8a0f910f2e7f7b12954; size=136M wgEncodeYaleChIPseqRawDataRep3Hepg2Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=Pol2; control=std; replicate=3; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=241; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=6758e6cb0a9eac452c17a363f750d749; size=163M wgEncodeYaleChIPseqRawDataRep3Hepg2Srebp1a.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=SREBP1; control=std; replicate=3; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=242; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=b2c0f72a2940fb97be0c5c162f5bb21b; size=159M wgEncodeYaleChIPseqRawDataRep3Hepg2Srebp1aInsln.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=insulin; antibody=SREBP1; control=std; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1073; setType=exp; controlId=HepG2/insulin/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with HepG2_Insulin_Control.; type=fastq; md5sum=c0cddb7706454ea3119a50492c47a3a0; size=89M wgEncodeYaleChIPseqRawDataRep3Hepg2Srebp2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HepG2; treatment=pravastatin; antibody=SREBP2; control=std; replicate=3; dataVersion=ENCODE Feb 2009 Freeze; dateSubmitted=2009-02-27; dateUnrestricted=2009-11-27; subId=243; setType=exp; controlId=HepG2/pravastatin/Input/std; type=fastq; md5sum=1098f24d4b37348c2775c160fafd7a19; size=146M wgEncodeYaleChIPseqRawDataRep3HuvecPol2.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=HUVEC; treatment=None; antibody=Pol2; control=std; replicate=3; dataVersion=ENCODE June 2010 Freeze; dateSubmitted=2010-01-09; dateUnrestricted=2010-10-08; subId=950; setType=exp; controlId=HUVEC/None/Input/std; type=fastq; md5sum=b18d03ed720179cc659062302ac76200; size=534M wgEncodeYaleChIPseqRawDataRep3K562Bdp1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BDP1; control=std; replicate=3; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-22; dateUnrestricted=2010-03-22; subId=383; setType=exp; controlId=K562/None/Input/std; labVersion=fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; type=fastq; md5sum=d7308abd509e221c07a513f52f66cb7c; size=565M wgEncodeYaleChIPseqRawDataRep3K562Brf1.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BRF1; control=std; replicate=3; dataVersion=ENCODE July 2009 Freeze; dateSubmitted=2009-06-22; dateUnrestricted=2010-03-22; subId=384; setType=exp; controlId=K562/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded, fragmented with both a probe sonicator and a Misonix sonicator, and precipitated with protein A sepharose beads; type=fastq; md5sum=8ca4dd516a9e839ee446bacb7c9ff332; size=89M wgEncodeYaleChIPseqRawDataRep3K562Brf2.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=BRF2; control=std; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-16; dateUnrestricted=2010-10-15; subId=1083; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=45cce05875294332e177c31a1a5d0100; size=414M wgEncodeYaleChIPseqRawDataRep3K562Cfos.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=c-Fos; control=std; replicate=3; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=68; setType=exp; controlId=K562/None/Input/std; type=fastq; md5sum=dd27739cd8f4ac1f1cf8362f82684c1b; size=164M wgEncodeYaleChIPseqRawDataRep3K562Tfiiic.fastq.gz project=wgEncode; grant=Snyder; lab=Harvard; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=K562; treatment=None; antibody=TFIIIC-110; control=std; replicate=3; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-15; dateUnrestricted=2010-10-15; subId=1081; setType=exp; controlId=K562/None/Input/std; labVersion=Illumina 2.0, low confidence sequences excluded; type=fastq; md5sum=733f4f69824a0c43168d4b241d1923cd; size=194M wgEncodeYaleChIPseqRawDataRep3Nb4Pol2.fastq.gz project=wgEncode; grant=Snyder; lab=Yale; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=NB4; treatment=None; antibody=Pol2; control=std; replicate=3; dataVersion=ENCODE Nov 2008 Freeze; dateSubmitted=2008-10-31; dateUnrestricted=2009-07-31; subId=18; setType=exp; controlId=NB4/None/Input/std; type=fastq; md5sum=e1baa8fb0371861a78f34c092f268ffd; size=121M wgEncodeYaleChIPseqRawDataRep4Gm10847NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM10847; treatment=None; antibody=NFKB; control=IgG-rab; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1050; setType=exp; controlId=GM10847/None/Input/IgG-rab; labVersion=Data paired with GM10847_IgG_Control; type=fastq; md5sum=b4d22334fb98a1fefa91d14d3076117c; size=548M wgEncodeYaleChIPseqRawDataRep4Gm12878NfkbIggrab.fastq.gz objStatus=revoked - incorrect rawdata files used for generation of processed data; project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=NFKB; control=IgG-rab; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=943; setType=exp; controlId=GM12878/None/Input/IgG-rab; labVersion=Data paired with GM12878_IgG_Control; type=fastq; md5sum=d30a6b918355fcd0cc42a083820fee09; size=617M wgEncodeYaleChIPseqRawDataRep4Gm12878NfkbTnfa.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=TNFa; antibody=NFKB; control=std; replicate=4; dataVersion=ENCODE Sep 2009 Freeze; dateSubmitted=2009-10-01; dateUnrestricted=2010-06-30; subId=620; setType=exp; controlId=GM12878/None/Input/std; type=fastq; md5sum=7abf9f9908e538f1438594dd0d89ad37; size=617M wgEncodeYaleChIPseqRawDataRep4Gm12878Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12878; treatment=None; antibody=Pol2; control=IgG-mus; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=957; setType=exp; controlId=GM12878/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. Data paired with GM12878_IgG_Control.; type=fastq; md5sum=ce00f2d669f97530a2f380fe12c0a870; size=205M wgEncodeYaleChIPseqRawDataRep4Gm12891Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM12891; treatment=None; antibody=Pol2; control=IgG-mus; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=865; setType=exp; controlId=GM12891/None/Input/IgG-mus; labVersion=Data paired with GM12891_IgG_Control.; type=fastq; md5sum=dc6c29a3adcb0ecf05c7dc06801919d9; size=342M wgEncodeYaleChIPseqRawDataRep4Gm15510NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM15510; treatment=None; antibody=NFKB; control=IgG-rab; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1052; setType=exp; controlId=GM15510/None/Input/IgG-rab; labVersion=Data paired with GM15510_IgG_Control.; type=fastq; md5sum=3f2ae96516787d95b7cf9284f06ff090; size=543M wgEncodeYaleChIPseqRawDataRep4Gm18505NfkbIggrab.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=NFKB; control=IgG-rab; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-12; dateUnrestricted=2010-10-12; subId=945; setType=exp; controlId=GM18505/None/Input/IgG-rab; labVersion=Data paired with GM18505_IgG_Control; type=fastq; md5sum=710c71cf27aec08aa05abbdba383a0ee; size=247M wgEncodeYaleChIPseqRawDataRep4Gm18505Pol2Musigg.fastq.gz project=wgEncode; grant=Snyder; lab=Stanford; composite=wgEncodeYaleChIPseq; dataType=ChipSeq; view=RawData; cell=GM18505; treatment=None; antibody=Pol2; control=IgG-mus; replicate=4; dataVersion=ENCODE Jan 2010 Freeze; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1016; setType=exp; controlId=GM18505/None/Input/IgG-mus; labVersion=Illumina 2.0, low confidence sequences excluded. 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