browser position  chr7:116045050-116127050
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE370_chr7_116045050_116045099 Liver" visibility=3 color=255,0,0
chr7	target	racefrag	116045050	116045099	+	.	.	5RACE370_chr7_116045050_116045099
chr7	target	racefrag	116126999	116127050	+	.	.	5RACE370_chr7_116045050_116045099
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE370_chr7_116045050_116045099 Liver" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE370_chr7_116045050_116045099 Liver" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE370_chr7_116045050_116045099 Liver" visibility=3 color=20,20,255
chr7	RTPCR_pool25	RTPCRfrag	116045029	116045050	.	.	.	5RACE370_chr7_116045050_116045099
chr7	RTPCR_pool25	RTPCRfrag	116096609	116096636	.	.	.	5RACE370_chr7_116045050_116045099
chr7	RTPCR_pool25	RTPCRfrag	116114090	116114111	.	.	.	5RACE370_chr7_116045050_116045099
chr7	RTPCR_pool25	RTPCRfrag	116121002	116121025	.	.	.	5RACE370_chr7_116045050_116045099
chr7	RTPCR_pool25	RTPCRfrag	116122085	116122166	.	.	.	5RACE370_chr7_116045050_116045099
track name="RACEfragsBrain" description="RACEfrags AC002543.1-5RACE370 Brain" 
track name="RACEfragsPlacenta" description="RACEfrags AC002543.1-5RACE370 Placenta" 
chr7	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	116096516	116096516	.	+	.	racefrag_1
chr7	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	116096517	116096558	.	+	.	racefrag_2
track name="RACEfragsColon" description="RACEfrags AC002543.1-5RACE370 Colon" 
chr7	5pr_Known_Colon-1_signal.bed_COR.bed	fragmented_racefrag	116096609	116096636	.	+	.	racefrag_1
chr7	5pr_Known_Colon-1_signal.bed_COR.bed	fragmented_racefrag	116122141	116122166	.	+	.	racefrag_2
track name="RACEfragsSmall_Intest" description="RACEfrags AC002543.1-5RACE370 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags AC002543.1-5RACE370 Heart" 
track name="RACEfragsSpleen" description="RACEfrags AC002543.1-5RACE370 Spleen" 
track name="RACEfragsKidney" description="RACEfrags AC002543.1-5RACE370 Kidney" 
track name="RACEfragsStomach" description="RACEfrags AC002543.1-5RACE370 Stomach" 
chr7	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	116096516	116096516	.	+	.	racefrag_1
chr7	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	116096517	116096558	.	+	.	racefrag_2
chr7	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	116096609	116096636	.	+	.	racefrag_3
chr7	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	116122141	116122166	.	+	.	racefrag_4
track name="RACEfragsLung" description="RACEfrags AC002543.1-5RACE370 Lung" 
track name="RACEfragsTesti" description="RACEfrags AC002543.1-5RACE370 Testi" 
chr7	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	116096516	116096516	.	+	.	racefrag_1
chr7	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	116096517	116096558	.	+	.	racefrag_2
track name="RACEfragsMuscle" description="RACEfrags AC002543.1-5RACE370 Muscle" 
chr7	5pr_Known_Muscle-1_signal.bed_COR.bed	fragmented_racefrag	116096516	116096516	.	+	.	racefrag_1
chr7	5pr_Known_Muscle-1_signal.bed_COR.bed	fragmented_racefrag	116096517	116096558	.	+	.	racefrag_2
track name="RACEfragsLiver" description="RACEfrags AC002543.1-5RACE370 Liver" 
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116045050	116045099	.	+	.	racefrag_1
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116096609	116096636	.	+	.	racefrag_2
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116114090	116114111	.	+	.	racefrag_3
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116121002	116121045	.	+	.	racefrag_4
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116121950	116122016	.	+	.	racefrag_5
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116122103	116122131	.	+	.	racefrag_6
chr7	5pr_Known_Liver-1_signal.bed_COR.bed	fragmented_racefrag	116122132	116122166	.	+	.	racefrag_7
track name="RACEfragsGM06990" description="RACEfrags AC002543.1-5RACE370 GM06990" 
chr7	GeCo_5prRACE_Alex_GM06990_pool_1_signal.bed.mod	fragmented_racefrag	116096609	116096636	.	+	.	racefrag_1
chr7	GeCo_5prRACE_Alex_GM06990_pool_1_signal.bed.mod	fragmented_racefrag	116122141	116122166	.	+	.	racefrag_2
track name="RACEfragsHL60" description="RACEfrags AC002543.1-5RACE370 HL60" 
chr7	GeCo_5prRACE_Alex_HL60_pool_1_signal.bed.mod	fragmented_racefrag	115491629	115491650	.	+	.	racefrag_1
chr7	GeCo_5prRACE_Alex_HL60_pool_1_signal.bed.mod	fragmented_racefrag	115748818	115748838	.	+	.	racefrag_2
chr7	GeCo_5prRACE_Alex_HL60_pool_1_signal.bed.mod	fragmented_racefrag	115947592	115947613	.	+	.	racefrag_3
chr7	GeCo_5prRACE_Alex_HL60_pool_1_signal.bed.mod	fragmented_racefrag	116096609	116096636	.	+	.	racefrag_4
chr7	GeCo_5prRACE_Alex_HL60_pool_1_signal.bed.mod	fragmented_racefrag	116122141	116122166	.	+	.	racefrag_5
track name="RACEfragsHeLa" description="RACEfrags AC002543.1-5RACE370 HeLa" 
chr7	5pr_Known_HeLa-1_signal.bed.mod	fragmented_racefrag	116096597	116096623	.	+	.	racefrag_1
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE370_chr7_116045050_116045099 Liver" visibility=0 color=160,30,200
chr7	exonerate:est2genome	exon	116045075	116045107	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132791	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122124	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19b07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19b07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132791	.	+	.	5RACE370_chr7_116045050_116045099-19b07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116096602	116096655	.	+	.	5RACE370_chr7_116045050_116045099-19c07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19c07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19c07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132791	.	+	.	5RACE370_chr7_116045050_116045099-19c07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116045075	116045107	.	+	.	5RACE370_chr7_116045050_116045099-19d07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116095196	116095355	.	+	.	5RACE370_chr7_116045050_116045099-19d07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19d07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19d07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116096608	116096655	.	+	.	5RACE370_chr7_116045050_116045099-19e07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19e07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19e07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132791	.	+	.	5RACE370_chr7_116045050_116045099-19e07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116045075	116045107	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116095196	116095355	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132793	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116096605	116096655	.	+	.	5RACE370_chr7_116045050_116045099-19g07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19g07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19g07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132791	.	+	.	5RACE370_chr7_116045050_116045099-19g07.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE370_chr7_116045050_116045099" visibility=3 color=160,30,100
chr7	exonerate:est2genome	exon	116045075	116045107	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132791	.	+	.	5RACE370_chr7_116045050_116045099-19a07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116045075	116045107	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116095196	116095355	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116122132	116122195	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116126999	116127050	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
chr7	exonerate:est2genome	exon	116132777	116132793	.	+	.	5RACE370_chr7_116045050_116045099-19f07.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE370_chr7_116045050_116045099" visibility=3 color=240,40,200
chr7	Known	exon	116045075	116045107	.	+	.	AC002543.1-009
chr7	Known	exon	116122132	116122195	.	+	.	AC002543.1-009
chr7	Known	exon	116126999	116127050	.	+	.	AC002543.1-009
chr7	Known	exon	116132777	116132791	.	+	.	AC002543.1-009
chr7	Known	exon	116045075	116045107	.	+	.	AC002543.1-010
chr7	Known	exon	116095196	116095355	.	+	.	AC002543.1-010
chr7	Known	exon	116122132	116122195	.	+	.	AC002543.1-010
chr7	Known	exon	116126999	116127050	.	+	.	AC002543.1-010
chr7	Known	exon	116132777	116132791	.	+	.	AC002543.1-010
