browser position  chr18:59778397-59799988
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE302_chr18_59778397_59778482 Testi" visibility=3 color=255,0,0
chr18	target	racefrag	59778397	59778482	+	.	.	5RACE302_chr18_59778397_59778482
chr18	target	racefrag	59799935	59799988	+	.	.	5RACE302_chr18_59778397_59778482
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE302_chr18_59778397_59778482 Testi" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE302_chr18_59778397_59778482 Testi" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE302_chr18_59778397_59778482 Testi" visibility=3 color=20,20,255
chr18	RTPCR_pool20	RTPCRfrag	59786635	59786700	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59796528	59796549	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59796631	59796668	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59796789	59796812	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59797198	59797302	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59797566	59797651	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59797984	59798005	.	.	.	5RACE302_chr18_59778397_59778482
chr18	RTPCR_pool20	RTPCRfrag	59798087	59798144	.	.	.	5RACE302_chr18_59778397_59778482
track name="RACEfragsBrain" description="RACEfrags AC009802.3-5RACE302 Brain" 
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59778397	59778482	.	+	.	racefrag_1
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59788257	59788314	.	+	.	racefrag_2
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59796459	59796512	.	+	.	racefrag_3
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59796513	59796528	.	+	.	racefrag_4
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_5
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59798087	59798144	.	+	.	racefrag_6
track name="RACEfragsPlacenta" description="RACEfrags AC009802.3-5RACE302 Placenta" 
track name="RACEfragsColon" description="RACEfrags AC009802.3-5RACE302 Colon" 
chr18	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59788236	59788314	.	+	.	racefrag_1
chr18	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_2
chr18	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59798087	59798144	.	+	.	racefrag_3
track name="RACEfragsSmall_Intest" description="RACEfrags AC009802.3-5RACE302 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags AC009802.3-5RACE302 Heart" 
chr18	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_1
chr18	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59797198	59797219	.	+	.	racefrag_2
chr18	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59797342	59797363	.	+	.	racefrag_3
chr18	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59797587	59797651	.	+	.	racefrag_4
chr18	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59797984	59798005	.	+	.	racefrag_5
track name="RACEfragsSpleen" description="RACEfrags AC009802.3-5RACE302 Spleen" 
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59778397	59778482	.	+	.	racefrag_1
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59788257	59788314	.	+	.	racefrag_2
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_3
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59797545	59797651	.	+	.	racefrag_4
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59797893	59798005	.	+	.	racefrag_5
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59798087	59798144	.	+	.	racefrag_6
track name="RACEfragsKidney" description="RACEfrags AC009802.3-5RACE302 Kidney" 
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59778397	59778482	.	+	.	racefrag_1
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59788277	59788314	.	+	.	racefrag_2
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59796528	59796549	.	+	.	racefrag_3
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796689	.	+	.	racefrag_4
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59798087	59798144	.	+	.	racefrag_5
track name="RACEfragsStomach" description="RACEfrags AC009802.3-5RACE302 Stomach" 
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59788277	59788314	.	+	.	racefrag_1
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59794967	59794989	.	+	.	racefrag_2
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59795178	59795237	.	+	.	racefrag_3
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59795303	59795326	.	+	.	racefrag_4
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59795919	59795953	.	+	.	racefrag_5
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59796438	59796512	.	+	.	racefrag_6
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59796513	59796549	.	+	.	racefrag_7
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796689	.	+	.	racefrag_8
chr18	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59798047	59798144	.	+	.	racefrag_9
track name="RACEfragsLung" description="RACEfrags AC009802.3-5RACE302 Lung" 
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59778397	59778482	.	+	.	racefrag_1
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59788277	59788314	.	+	.	racefrag_2
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59792798	59792819	.	+	.	racefrag_3
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59792909	59793142	.	+	.	racefrag_4
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59794967	59794989	.	+	.	racefrag_5
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59795919	59795953	.	+	.	racefrag_6
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59796438	59796512	.	+	.	racefrag_7
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59796513	59796549	.	+	.	racefrag_8
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796689	.	+	.	racefrag_9
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59797198	59797302	.	+	.	racefrag_10
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59797342	59797383	.	+	.	racefrag_11
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59797545	59797651	.	+	.	racefrag_12
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59797893	59798005	.	+	.	racefrag_13
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59798047	59798144	.	+	.	racefrag_14
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59799047	59799092	.	+	.	racefrag_15
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59799695	59799718	.	+	.	racefrag_16
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59799820	59799934	.	+	.	racefrag_17
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59799935	59799967	.	+	.	racefrag_18
track name="RACEfragsTesti" description="RACEfrags AC009802.3-5RACE302 Testi" 
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59778397	59778482	.	+	.	racefrag_1
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59787500	59787548	.	+	.	racefrag_2
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59788257	59788314	.	+	.	racefrag_3
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59788712	59788750	.	+	.	racefrag_4
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59789503	59789524	.	+	.	racefrag_5
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_6
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59797893	59798005	.	+	.	racefrag_7
chr18	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59798087	59798144	.	+	.	racefrag_8
track name="RACEfragsMuscle" description="RACEfrags AC009802.3-5RACE302 Muscle" 
chr18	5pr_Known_Muscle-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_1
chr18	5pr_Known_Muscle-5_signal.bed_COR.bed	fragmented_racefrag	59798047	59798144	.	+	.	racefrag_2
track name="RACEfragsLiver" description="RACEfrags AC009802.3-5RACE302 Liver" 
chr18	5pr_Known_Liver-5_signal.bed_COR.bed	fragmented_racefrag	59788257	59788314	.	+	.	racefrag_1
chr18	5pr_Known_Liver-5_signal.bed_COR.bed	fragmented_racefrag	59796528	59796549	.	+	.	racefrag_2
chr18	5pr_Known_Liver-5_signal.bed_COR.bed	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_3
chr18	5pr_Known_Liver-5_signal.bed_COR.bed	fragmented_racefrag	59798047	59798144	.	+	.	racefrag_4
track name="RACEfragsGM06990" description="RACEfrags AC009802.3-5RACE302 GM06990" 
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59778397	59778418	.	+	.	racefrag_1
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59778462	59778482	.	+	.	racefrag_2
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59788257	59788277	.	+	.	racefrag_3
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_4
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59798047	59798144	.	+	.	racefrag_5
track name="RACEfragsHL60" description="RACEfrags AC009802.3-5RACE302 HL60" 
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59788603	59788624	.	+	.	racefrag_1
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59796502	59796512	.	+	.	racefrag_2
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59796513	59796549	.	+	.	racefrag_3
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59796595	59796668	.	+	.	racefrag_4
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59798047	59798144	.	+	.	racefrag_5
track name="RACEfragsHeLa" description="RACEfrags AC009802.3-5RACE302 HeLa" 
chr18	5pr_Known_HeLa-5_signal.bed.mod	fragmented_racefrag	59798075	59798131	.	+	.	racefrag_1
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE302_chr18_59778397_59778482 Testi" visibility=0 color=160,30,200
chr18	exonerate:est2genome	exon	59778458	59778489	.	+	.	5RACE302_chr18_59778397_59778482-16d04.fasta.screen.Contig1-COR
chr18	exonerate:est2genome	exon	59796513	59796690	.	+	.	5RACE302_chr18_59778397_59778482-16d04.fasta.screen.Contig1-COR
chr18	exonerate:est2genome	exon	59798015	59798152	.	+	.	5RACE302_chr18_59778397_59778482-16d04.fasta.screen.Contig1-COR
chr18	exonerate:est2genome	exon	59799935	59799988	.	+	.	5RACE302_chr18_59778397_59778482-16d04.fasta.screen.Contig1-COR
chr18	exonerate:est2genome	exon	59778454	59778489	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
chr18	exonerate:est2genome	exon	59796513	59796690	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
chr18	exonerate:est2genome	exon	59798015	59798152	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
chr18	exonerate:est2genome	exon	59799935	59799988	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE302_chr18_59778397_59778482" visibility=3 color=160,30,100
chr18	exonerate:est2genome	exon	59778454	59778489	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
chr18	exonerate:est2genome	exon	59796513	59796690	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
chr18	exonerate:est2genome	exon	59798015	59798152	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
chr18	exonerate:est2genome	exon	59799935	59799988	.	+	.	5RACE302_chr18_59778397_59778482-302-E-B6
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE302_chr18_59778397_59778482" visibility=3 color=240,40,200
chr18	Novel_CDS	exon	59767571	59767614	.	+	.	AC009802.2-002
chr18	Novel_CDS	exon	59772622	59772771	.	+	.	AC009802.2-002
chr18	Novel_CDS	exon	59778372	59778489	.	+	.	AC009802.2-002
chr18	Novel_CDS	exon	59796513	59796690	.	+	.	AC009802.2-002
chr18	Novel_CDS	exon	59798015	59798152	.	+	.	AC009802.2-002
chr18	Novel_CDS	exon	59799935	59799988	.	+	.	AC009802.2-002
