browser position  chr18:59720019-59735712
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE300_chr18_59720027_59720048 Placenta" visibility=3 color=255,0,0
chr18	target	racefrag	59720027	59720048	+	.	.	5RACE300_chr18_59720027_59720048
chr18	target	racefrag	59735670	59735712	+	.	.	5RACE300_chr18_59720027_59720048
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE300_chr18_59720027_59720048 Placenta" visibility=3 color=20,20,255
chr18	RTPCR_pool35	RTPCRfrag	59720027	59720048	.	.	.	5RACE300_chr18_59720027_59720048
chr18	RTPCR_pool35	RTPCRfrag	59720632	59720653	.	.	.	5RACE300_chr18_59720027_59720048
chr18	RTPCR_pool35	RTPCRfrag	59720693	59720777	.	.	.	5RACE300_chr18_59720027_59720048
chr18	RTPCR_pool35	RTPCRfrag	59721311	59721351	.	.	.	5RACE300_chr18_59720027_59720048
chr18	RTPCR_pool35	RTPCRfrag	59726192	59726240	.	.	.	5RACE300_chr18_59720027_59720048
chr18	RTPCR_pool35	RTPCRfrag	59733738	59733783	.	.	.	5RACE300_chr18_59720027_59720048
chr18	RTPCR_pool35	RTPCRfrag	59733826	59733885	.	.	.	5RACE300_chr18_59720027_59720048
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE300_chr18_59720027_59720048 Placenta" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE300_chr18_59720027_59720048 Placenta" visibility=3 color=20,20,255
track name="RACEfragsBrain" description="RACEfrags AC009802.1-5RACE300 Brain" 
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59715383	59715425	.	+	.	racefrag_1
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59720653	59720693	.	+	.	racefrag_2
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59720732	59720753	.	+	.	racefrag_3
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59733761	59733783	.	+	.	racefrag_4
chr18	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_5
track name="RACEfragsPlacenta" description="RACEfrags AC009802.1-5RACE300 Placenta" 
chr18	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59715383	59715425	.	+	.	racefrag_1
chr18	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59720027	59720048	.	+	.	racefrag_2
chr18	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59720693	59720753	.	+	.	racefrag_3
chr18	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59721144	59721165	.	+	.	racefrag_4
chr18	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59733738	59733885	.	+	.	racefrag_5
chr18	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_6
track name="RACEfragsColon" description="RACEfrags AC009802.1-5RACE300 Colon" 
track name="RACEfragsSmall_Intest" description="RACEfrags AC009802.1-5RACE300 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags AC009802.1-5RACE300 Heart" 
track name="RACEfragsSpleen" description="RACEfrags AC009802.1-5RACE300 Spleen" 
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59733738	59733885	.	+	.	racefrag_1
chr18	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_2
track name="RACEfragsKidney" description="RACEfrags AC009802.1-5RACE300 Kidney" 
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59726215	59726240	.	+	.	racefrag_1
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59733738	59733885	.	+	.	racefrag_2
chr18	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_3
track name="RACEfragsStomach" description="RACEfrags AC009802.1-5RACE300 Stomach" 
track name="RACEfragsLung" description="RACEfrags AC009802.1-5RACE300 Lung" 
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59733738	59733885	.	+	.	racefrag_1
chr18	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_2
track name="RACEfragsTesti" description="RACEfrags AC009802.1-5RACE300 Testi" 
track name="RACEfragsMuscle" description="RACEfrags AC009802.1-5RACE300 Muscle" 
track name="RACEfragsLiver" description="RACEfrags AC009802.1-5RACE300 Liver" 
track name="RACEfragsGM06990" description="RACEfrags AC009802.1-5RACE300 GM06990" 
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59726192	59726240	.	+	.	racefrag_1
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59728419	59728458	.	+	.	racefrag_2
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59733718	59733783	.	+	.	racefrag_3
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59733826	59733885	.	+	.	racefrag_4
chr18	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_5
track name="RACEfragsHL60" description="RACEfrags AC009802.1-5RACE300 HL60" 
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59728419	59728458	.	+	.	racefrag_1
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59733226	59733247	.	+	.	racefrag_2
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59733693	59733715	.	+	.	racefrag_3
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59733716	59733783	.	+	.	racefrag_4
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59733826	59733885	.	+	.	racefrag_5
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59735306	59735344	.	+	.	racefrag_6
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59735552	59735594	.	+	.	racefrag_7
chr18	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59735682	59735703	.	+	.	racefrag_8
track name="RACEfragsHeLa" description="RACEfrags AC009802.1-5RACE300 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE300_chr18_59720027_59720048 Placenta" visibility=0 color=160,30,200
chr18	exonerate:est2genome	exon	59720025	59720096	.	+	.	5RACE300_chr18_59720027_59720048-08246B10
chr18	exonerate:est2genome	exon	59720618	59720782	.	+	.	5RACE300_chr18_59720027_59720048-08246B10
chr18	exonerate:est2genome	exon	59721115	59721189	.	+	.	5RACE300_chr18_59720027_59720048-08246B10
chr18	exonerate:est2genome	exon	59726174	59726254	.	+	.	5RACE300_chr18_59720027_59720048-08246B10
chr18	exonerate:est2genome	exon	59733716	59733892	.	+	.	5RACE300_chr18_59720027_59720048-08246B10
chr18	exonerate:est2genome	exon	59735670	59735698	.	+	.	5RACE300_chr18_59720027_59720048-08246B10
chr18	exonerate:est2genome	exon	59720025	59720096	.	+	.	5RACE300_chr18_59720027_59720048-08246C10
chr18	exonerate:est2genome	exon	59720618	59720782	.	+	.	5RACE300_chr18_59720027_59720048-08246C10
chr18	exonerate:est2genome	exon	59721115	59721189	.	+	.	5RACE300_chr18_59720027_59720048-08246C10
chr18	exonerate:est2genome	exon	59726174	59726254	.	+	.	5RACE300_chr18_59720027_59720048-08246C10
chr18	exonerate:est2genome	exon	59733716	59733870	.	+	.	5RACE300_chr18_59720027_59720048-08246C10
chr18	exonerate:est2genome	exon	59720025	59720096	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59720618	59720782	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59721115	59721189	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59733716	59733892	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59735670	59735704	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59720025	59720096	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59720618	59720782	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59721115	59721189	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59726174	59726254	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59733716	59733892	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59735670	59735704	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE300_chr18_59720027_59720048" visibility=3 color=160,30,100
chr18	exonerate:est2genome	exon	59720025	59720096	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59720618	59720782	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59721115	59721189	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59733716	59733892	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59735670	59735704	.	+	.	5RACE300_chr18_59720027_59720048-08246E10
chr18	exonerate:est2genome	exon	59720025	59720096	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59720618	59720782	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59721115	59721189	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59726174	59726254	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59733716	59733892	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
chr18	exonerate:est2genome	exon	59735670	59735704	.	+	.	5RACE300_chr18_59720027_59720048-08246F10
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE300_chr18_59720027_59720048" visibility=3 color=240,40,200
chr18	Known	exon	59715388	59715433	.	+	.	AC009802.1-003
chr18	Known	CDS	59715389	59715433	.	+	0	AC009802.1-003
chr18	Known	exon	59715941	59716058	.	+	.	AC009802.1-003
chr18	Known	CDS	59715941	59716058	.	+	0	AC009802.1-003
chr18	Known	exon	59719954	59720096	.	+	.	AC009802.1-003
chr18	Known	CDS	59719954	59720096	.	+	2	AC009802.1-003
chr18	Known	exon	59720618	59720782	.	+	.	AC009802.1-003
chr18	Known	CDS	59720618	59720782	.	+	0	AC009802.1-003
chr18	Known	exon	59721115	59721189	.	+	.	AC009802.1-003
chr18	Known	CDS	59721115	59721189	.	+	0	AC009802.1-003
chr18	Known	exon	59733716	59733892	.	+	.	AC009802.1-003
chr18	Known	CDS	59733716	59733892	.	+	0	AC009802.1-003
chr18	Known	exon	59735670	59735704	.	+	.	AC009802.1-003
chr18	Known	CDS	59735670	59735704	.	+	0	AC009802.1-003
chr18	Known	exon	59715388	59715433	.	+	.	AC009802.1-002
chr18	Known	CDS	59715389	59715433	.	+	0	AC009802.1-002
chr18	Known	exon	59715941	59716058	.	+	.	AC009802.1-002
chr18	Known	CDS	59715941	59716058	.	+	0	AC009802.1-002
chr18	Known	exon	59719954	59720096	.	+	.	AC009802.1-002
chr18	Known	CDS	59719954	59720096	.	+	2	AC009802.1-002
chr18	Known	exon	59720618	59720782	.	+	.	AC009802.1-002
chr18	Known	CDS	59720618	59720782	.	+	0	AC009802.1-002
chr18	Known	exon	59721115	59721189	.	+	.	AC009802.1-002
chr18	Known	CDS	59721115	59721189	.	+	0	AC009802.1-002
chr18	Known	exon	59726174	59726254	.	+	.	AC009802.1-002
chr18	Known	CDS	59726174	59726254	.	+	0	AC009802.1-002
chr18	Known	exon	59733716	59733892	.	+	.	AC009802.1-002
chr18	Known	CDS	59733716	59733892	.	+	0	AC009802.1-002
chr18	Known	exon	59735670	59735704	.	+	.	AC009802.1-002
chr18	Known	CDS	59735670	59735704	.	+	0	AC009802.1-002
