browser position  chr16:386726-389456
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE241_chr16_386727_386755 Colon" visibility=3 color=255,0,0
chr16	target	racefrag	386727	386755	+	.	.	5RACE241_chr16_386727_386755
chr16	target	racefrag	388411	389456	+	.	.	5RACE241_chr16_386727_386755
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE241_chr16_386727_386755 Colon" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE241_chr16_386727_386755 Colon" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE241_chr16_386727_386755 Colon" visibility=3 color=20,20,255
chr16	RTPCR_pool15	RTPCRfrag	386727	386807	.	.	.	5RACE241_chr16_386727_386755
chr16	RTPCR_pool15	RTPCRfrag	386954	387016	.	.	.	5RACE241_chr16_386727_386755
chr16	RTPCR_pool15	RTPCRfrag	388246	388371	.	.	.	5RACE241_chr16_386727_386755
chr16	RTPCR_pool15	RTPCRfrag	388527	388793	.	.	.	5RACE241_chr16_386727_386755
chr16	RTPCR_pool15	RTPCRfrag	388850	388927	.	.	.	5RACE241_chr16_386727_386755
chr16	RTPCR_pool15	RTPCRfrag	388968	389094	.	.	.	5RACE241_chr16_386727_386755
chr16	RTPCR_pool15	RTPCRfrag	389331	389446	.	.	.	5RACE241_chr16_386727_386755
track name="RACEfragsBrain" description="RACEfrags Z97634.4-5RACE241 Brain" 
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	386727	386755	.	+	.	racefrag_1
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	386756	386807	.	+	.	racefrag_2
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_3
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	388052	388162	.	+	.	racefrag_4
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	388246	388417	.	+	.	racefrag_5
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	388459	388793	.	+	.	racefrag_6
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	388835	388927	.	+	.	racefrag_7
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	388968	389123	.	+	.	racefrag_8
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	389194	389224	.	+	.	racefrag_9
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	389270	389291	.	+	.	racefrag_10
chr16	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	389331	389425	.	+	.	racefrag_11
track name="RACEfragsPlacenta" description="RACEfrags Z97634.4-5RACE241 Placenta" 
chr16	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_1
chr16	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	388012	388162	.	+	.	racefrag_2
chr16	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_3
chr16	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	389013	389094	.	+	.	racefrag_4
chr16	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	389331	389446	.	+	.	racefrag_5
track name="RACEfragsColon" description="RACEfrags Z97634.4-5RACE241 Colon" 
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	386727	386755	.	+	.	racefrag_1
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	386756	386807	.	+	.	racefrag_2
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_3
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_4
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	388527	388793	.	+	.	racefrag_5
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	388850	388927	.	+	.	racefrag_6
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	388968	389123	.	+	.	racefrag_7
chr16	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	389291	389425	.	+	.	racefrag_8
track name="RACEfragsSmall_Intest" description="RACEfrags Z97634.4-5RACE241 Small_Intest" 
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	362275	362284	.	+	.	racefrag_1
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	362285	362297	.	+	.	racefrag_2
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	373344	373409	.	+	.	racefrag_3
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_4
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_5
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	389013	389094	.	+	.	racefrag_6
chr16	5pr_Known_Small_Intest-3_signal.bed_COR.bed	fragmented_racefrag	389368	389425	.	+	.	racefrag_7
track name="RACEfragsHeart" description="RACEfrags Z97634.4-5RACE241 Heart" 
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_1
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	387912	387971	.	+	.	racefrag_2
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	388012	388162	.	+	.	racefrag_3
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_4
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	388850	388927	.	+	.	racefrag_5
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	389013	389123	.	+	.	racefrag_6
chr16	5pr_Known_Heart-3_signal.bed_COR.bed	fragmented_racefrag	389331	389425	.	+	.	racefrag_7
track name="RACEfragsSpleen" description="RACEfrags Z97634.4-5RACE241 Spleen" 
chr16	5pr_Known_Spleen-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_1
chr16	5pr_Known_Spleen-3_signal.bed_COR.bed	fragmented_racefrag	388891	388927	.	+	.	racefrag_2
chr16	5pr_Known_Spleen-3_signal.bed_COR.bed	fragmented_racefrag	388968	389123	.	+	.	racefrag_3
chr16	5pr_Known_Spleen-3_signal.bed_COR.bed	fragmented_racefrag	389194	389446	.	+	.	racefrag_4
track name="RACEfragsKidney" description="RACEfrags Z97634.4-5RACE241 Kidney" 
chr16	5pr_Known_Kidney-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_1
chr16	5pr_Known_Kidney-3_signal.bed_COR.bed	fragmented_racefrag	388459	388607	.	+	.	racefrag_2
chr16	5pr_Known_Kidney-3_signal.bed_COR.bed	fragmented_racefrag	388649	388793	.	+	.	racefrag_3
chr16	5pr_Known_Kidney-3_signal.bed_COR.bed	fragmented_racefrag	388850	388927	.	+	.	racefrag_4
chr16	5pr_Known_Kidney-3_signal.bed_COR.bed	fragmented_racefrag	388968	389145	.	+	.	racefrag_5
chr16	5pr_Known_Kidney-3_signal.bed_COR.bed	fragmented_racefrag	389194	389425	.	+	.	racefrag_6
track name="RACEfragsStomach" description="RACEfrags Z97634.4-5RACE241 Stomach" 
chr16	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	386976	387016	.	+	.	racefrag_1
chr16	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	388266	388371	.	+	.	racefrag_2
chr16	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	388906	388927	.	+	.	racefrag_3
chr16	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	389013	389094	.	+	.	racefrag_4
chr16	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	389389	389425	.	+	.	racefrag_5
track name="RACEfragsLung" description="RACEfrags Z97634.4-5RACE241 Lung" 
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_1
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388012	388162	.	+	.	racefrag_2
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_3
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388548	388607	.	+	.	racefrag_4
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388649	388711	.	+	.	racefrag_5
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388747	388772	.	+	.	racefrag_6
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388850	388927	.	+	.	racefrag_7
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	388968	389123	.	+	.	racefrag_8
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	389194	389250	.	+	.	racefrag_9
chr16	5pr_Known_Lung-3_signal.bed_COR.bed	fragmented_racefrag	389331	389446	.	+	.	racefrag_10
track name="RACEfragsTesti" description="RACEfrags Z97634.4-5RACE241 Testi" 
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	386766	386807	.	+	.	racefrag_1
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_2
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	388120	388141	.	+	.	racefrag_3
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_4
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	388459	388607	.	+	.	racefrag_5
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	388649	388793	.	+	.	racefrag_6
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	388850	388927	.	+	.	racefrag_7
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	388968	389123	.	+	.	racefrag_8
chr16	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	389291	389425	.	+	.	racefrag_9
track name="RACEfragsMuscle" description="RACEfrags Z97634.4-5RACE241 Muscle" 
chr16	5pr_Known_Muscle-3_signal.bed_COR.bed	fragmented_racefrag	386954	387016	.	+	.	racefrag_1
chr16	5pr_Known_Muscle-3_signal.bed_COR.bed	fragmented_racefrag	388246	388371	.	+	.	racefrag_2
chr16	5pr_Known_Muscle-3_signal.bed_COR.bed	fragmented_racefrag	389013	389123	.	+	.	racefrag_3
chr16	5pr_Known_Muscle-3_signal.bed_COR.bed	fragmented_racefrag	389389	389425	.	+	.	racefrag_4
track name="RACEfragsLiver" description="RACEfrags Z97634.4-5RACE241 Liver" 
chr16	5pr_Known_Liver-3_signal.bed_COR.bed	fragmented_racefrag	388266	388371	.	+	.	racefrag_1
chr16	5pr_Known_Liver-3_signal.bed_COR.bed	fragmented_racefrag	389013	389123	.	+	.	racefrag_2
chr16	5pr_Known_Liver-3_signal.bed_COR.bed	fragmented_racefrag	389331	389425	.	+	.	racefrag_3
track name="RACEfragsGM06990" description="RACEfrags Z97634.4-5RACE241 GM06990" 
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	369422	369443	.	+	.	racefrag_1
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	371524	371543	.	+	.	racefrag_2
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	386727	386755	.	+	.	racefrag_3
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	386756	386807	.	+	.	racefrag_4
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	386954	387016	.	+	.	racefrag_5
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	388266	388285	.	+	.	racefrag_6
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	388323	388371	.	+	.	racefrag_7
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	389013	389094	.	+	.	racefrag_8
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	389270	389291	.	+	.	racefrag_9
chr16	GeCo_5prRACE_Alex_GM06990_pool_3_signal.bed.mod	fragmented_racefrag	389331	389446	.	+	.	racefrag_10
track name="RACEfragsHL60" description="RACEfrags Z97634.4-5RACE241 HL60" 
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	386727	386755	.	+	.	racefrag_1
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	386756	386766	.	+	.	racefrag_2
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	386954	387016	.	+	.	racefrag_3
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388052	388162	.	+	.	racefrag_4
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388266	388285	.	+	.	racefrag_5
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388323	388371	.	+	.	racefrag_6
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388548	388607	.	+	.	racefrag_7
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388649	388711	.	+	.	racefrag_8
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388747	388793	.	+	.	racefrag_9
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388850	388927	.	+	.	racefrag_10
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	388968	389123	.	+	.	racefrag_11
chr16	GeCo_5prRACE_Alex_HL60_pool_3_signal.bed.mod	fragmented_racefrag	389194	389446	.	+	.	racefrag_12
track name="RACEfragsHeLa" description="RACEfrags Z97634.4-5RACE241 HeLa" 
chr16	5pr_Known_HeLa-3_signal.bed.mod	fragmented_racefrag	389001	389057	.	+	.	racefrag_1
chr16	5pr_Known_HeLa-3_signal.bed.mod	fragmented_racefrag	389377	389433	.	+	.	racefrag_2
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE241_chr16_386727_386755 Colon" visibility=0 color=160,30,200
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12a10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12a10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12a10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	386976	387080	.	+	.	5RACE241_chr16_386727_386755-12c10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12c10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12c10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12d10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12d10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12d10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12e10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12e10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12e10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12f10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12f10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12f10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12g10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12g10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12g10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12h10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12h10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12h10.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE241_chr16_386727_386755" visibility=3 color=160,30,100
chr16	exonerate:est2genome	exon	386726	387080	.	+	.	5RACE241_chr16_386727_386755-12a10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	388991	389124	.	+	.	5RACE241_chr16_386727_386755-12a10.fasta.screen.Contig1
chr16	exonerate:est2genome	exon	389380	389456	.	+	.	5RACE241_chr16_386727_386755-12a10.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE241_chr16_386727_386755" visibility=3 color=240,40,200
chr16	Known	exon	386726	387080	.	+	.	Z97634.4-002
chr16	Known	exon	388991	389124	.	+	.	Z97634.4-002
chr16	Known	exon	389380	389481	.	+	.	Z97634.4-002
chr16	Known	exon	389628	389740	.	+	.	Z97634.4-002
chr16	Known	exon	390220	390747	.	+	.	Z97634.4-002
