browser position  chr19:59847173-59867225
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE208_chr19_59847174_59847202 Placenta" visibility=3 color=255,0,0
chr19	target	racefrag	59847174	59847202	+	.	.	5RACE208_chr19_59847174_59847202
chr19	target	racefrag	59867024	59867225	+	.	.	5RACE208_chr19_59847174_59847202
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE208_chr19_59847174_59847202 Placenta" visibility=3 color=20,20,255
chr19	RTPCR_pool13	RTPCRfrag	59847174	59847220	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59851310	59851332	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59851416	59851439	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59851640	59851703	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59851748	59851791	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59851857	59851923	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59852011	59852052	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59853028	59853052	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59866099	59866322	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59866796	59866829	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool13	RTPCRfrag	59867041	59867210	.	.	.	5RACE208_chr19_59847174_59847202
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE208_chr19_59847174_59847202 Placenta" visibility=3 color=20,20,255
chr19	oligodT_pool13	RTPCRfrag	59847195	59847220	.	.	.	5RACE208_chr19_59847174_59847202
chr19	oligodT_pool13	RTPCRfrag	59866808	59866829	.	.	.	5RACE208_chr19_59847174_59847202
chr19	oligodT_pool13	RTPCRfrag	59867041	59867210	.	.	.	5RACE208_chr19_59847174_59847202
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE208_chr19_59847174_59847202 Placenta" visibility=3 color=20,20,255
chr19	RTPCR_pool25	RTPCRfrag	59847151	59847220	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool25	RTPCRfrag	59866099	59866322	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool25	RTPCRfrag	59866796	59866829	.	.	.	5RACE208_chr19_59847174_59847202
chr19	RTPCR_pool25	RTPCRfrag	59867041	59867218	.	.	.	5RACE208_chr19_59847174_59847202
track name="RACEfragsBrain" description="RACEfrags AC011515.1-5RACE208 Brain" 
chr19	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59802553	59802581	.	+	.	racefrag_1
chr19	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59803094	59803140	.	+	.	racefrag_2
chr19	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59803249	59803270	.	+	.	racefrag_3
chr19	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59866209	59866322	.	+	.	racefrag_4
chr19	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59866808	59866829	.	+	.	racefrag_5
chr19	5pr_Known_Brain-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867218	.	+	.	racefrag_6
track name="RACEfragsPlacenta" description="RACEfrags AC011515.1-5RACE208 Placenta" 
chr19	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59847174	59847202	.	+	.	racefrag_1
chr19	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59866153	59866322	.	+	.	racefrag_2
chr19	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59866802	59866829	.	+	.	racefrag_3
chr19	5pr_Known_Placenta-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867244	.	+	.	racefrag_4
track name="RACEfragsColon" description="RACEfrags AC011515.1-5RACE208 Colon" 
chr19	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59866237	59866258	.	+	.	racefrag_1
chr19	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59866299	59866322	.	+	.	racefrag_2
chr19	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59866802	59866829	.	+	.	racefrag_3
chr19	5pr_Known_Colon-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867244	.	+	.	racefrag_4
track name="RACEfragsSmall_Intest" description="RACEfrags AC011515.1-5RACE208 Small_Intest" 
chr19	5pr_Known_Small_Intest-5_signal.bed_COR.bed	fragmented_racefrag	59866237	59866322	.	+	.	racefrag_1
chr19	5pr_Known_Small_Intest-5_signal.bed_COR.bed	fragmented_racefrag	59866802	59866829	.	+	.	racefrag_2
chr19	5pr_Known_Small_Intest-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867265	.	+	.	racefrag_3
track name="RACEfragsHeart" description="RACEfrags AC011515.1-5RACE208 Heart" 
chr19	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59834944	59834969	.	+	.	racefrag_1
chr19	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59866237	59866258	.	+	.	racefrag_2
chr19	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59866299	59866322	.	+	.	racefrag_3
chr19	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59866808	59866829	.	+	.	racefrag_4
chr19	5pr_Known_Heart-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867218	.	+	.	racefrag_5
track name="RACEfragsSpleen" description="RACEfrags AC011515.1-5RACE208 Spleen" 
chr19	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59805084	59805146	.	+	.	racefrag_1
chr19	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59834570	59834658	.	+	.	racefrag_2
chr19	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59866237	59866322	.	+	.	racefrag_3
chr19	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59866802	59866837	.	+	.	racefrag_4
chr19	5pr_Known_Spleen-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867218	.	+	.	racefrag_5
track name="RACEfragsKidney" description="RACEfrags AC011515.1-5RACE208 Kidney" 
chr19	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59847174	59847202	.	+	.	racefrag_1
chr19	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59866237	59866322	.	+	.	racefrag_2
chr19	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59866802	59866829	.	+	.	racefrag_3
chr19	5pr_Known_Kidney-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867265	.	+	.	racefrag_4
track name="RACEfragsStomach" description="RACEfrags AC011515.1-5RACE208 Stomach" 
chr19	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59866299	59866322	.	+	.	racefrag_1
chr19	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59866808	59866829	.	+	.	racefrag_2
chr19	5pr_Known_Stomach-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867280	.	+	.	racefrag_3
track name="RACEfragsLung" description="RACEfrags AC011515.1-5RACE208 Lung" 
chr19	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59847174	59847202	.	+	.	racefrag_1
chr19	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59866209	59866322	.	+	.	racefrag_2
chr19	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59866802	59866837	.	+	.	racefrag_3
chr19	5pr_Known_Lung-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867265	.	+	.	racefrag_4
track name="RACEfragsTesti" description="RACEfrags AC011515.1-5RACE208 Testi" 
chr19	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59866299	59866322	.	+	.	racefrag_1
chr19	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59866808	59866829	.	+	.	racefrag_2
chr19	5pr_Known_Testi-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867218	.	+	.	racefrag_3
track name="RACEfragsMuscle" description="RACEfrags AC011515.1-5RACE208 Muscle" 
chr19	5pr_Known_Muscle-5_signal.bed_COR.bed	fragmented_racefrag	59866237	59866322	.	+	.	racefrag_1
chr19	5pr_Known_Muscle-5_signal.bed_COR.bed	fragmented_racefrag	59866808	59866829	.	+	.	racefrag_2
chr19	5pr_Known_Muscle-5_signal.bed_COR.bed	fragmented_racefrag	59867041	59867265	.	+	.	racefrag_3
track name="RACEfragsLiver" description="RACEfrags AC011515.1-5RACE208 Liver" 
chr19	5pr_Known_Liver-5_signal.bed_COR.bed	fragmented_racefrag	59866299	59866322	.	+	.	racefrag_1
chr19	5pr_Known_Liver-5_signal.bed_COR.bed	fragmented_racefrag	59867091	59867218	.	+	.	racefrag_2
track name="RACEfragsGM06990" description="RACEfrags AC011515.1-5RACE208 GM06990" 
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59811617	59811637	.	+	.	racefrag_1
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59838871	59838890	.	+	.	racefrag_2
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59855309	59855333	.	+	.	racefrag_3
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59865979	59866000	.	+	.	racefrag_4
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59866153	59866174	.	+	.	racefrag_5
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59866209	59866322	.	+	.	racefrag_6
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59866808	59866837	.	+	.	racefrag_7
chr19	GeCo_5prRACE_Alex_GM06990_pool_5_signal.bed.mod	fragmented_racefrag	59867041	59867218	.	+	.	racefrag_8
track name="RACEfragsHL60" description="RACEfrags AC011515.1-5RACE208 HL60" 
chr19	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59834944	59834969	.	+	.	racefrag_1
chr19	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59858322	59858345	.	+	.	racefrag_2
chr19	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59866237	59866258	.	+	.	racefrag_3
chr19	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59866299	59866322	.	+	.	racefrag_4
chr19	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59866808	59866829	.	+	.	racefrag_5
chr19	GeCo_5prRACE_Alex_HL60_pool_5_signal.bed.mod	fragmented_racefrag	59867041	59867218	.	+	.	racefrag_6
track name="RACEfragsHeLa" description="RACEfrags AC011515.1-5RACE208 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE208_chr19_59847174_59847202 Placenta" visibility=0 color=160,30,200
chr19	exonerate:est2genome	exon	59847178	59847229	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866083	59866331	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866802	59866837	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59867024	59867225	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59847178	59847229	.	+	.	5RACE208_chr19_59847174_59847202-10b09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866083	59866331	.	+	.	5RACE208_chr19_59847174_59847202-10b09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866802	59866837	.	+	.	5RACE208_chr19_59847174_59847202-10b09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59867024	59867225	.	+	.	5RACE208_chr19_59847174_59847202-10b09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59847178	59847229	.	+	.	5RACE208_chr19_59847174_59847202-10e09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866083	59866331	.	+	.	5RACE208_chr19_59847174_59847202-10e09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866802	59866837	.	+	.	5RACE208_chr19_59847174_59847202-10e09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59867024	59867225	.	+	.	5RACE208_chr19_59847174_59847202-10e09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59515039	59515230	.	+	.	5RACE208_chr19_59847174_59847202-08246A06
chr19	exonerate:est2genome	exon	59515417	59515452	.	+	.	5RACE208_chr19_59847174_59847202-08246A06
chr19	exonerate:est2genome	exon	59515619	59515703	.	+	.	5RACE208_chr19_59847174_59847202-08246A06
chr19	exonerate:est2genome	exon	59516099	59516172	.	+	.	5RACE208_chr19_59847174_59847202-08246A06
chr19	exonerate:est2genome	exon	59515039	59515230	.	+	.	5RACE208_chr19_59847174_59847202-08246F06
chr19	exonerate:est2genome	exon	59515417	59515452	.	+	.	5RACE208_chr19_59847174_59847202-08246F06
chr19	exonerate:est2genome	exon	59515619	59515703	.	+	.	5RACE208_chr19_59847174_59847202-08246F06
chr19	exonerate:est2genome	exon	59516099	59516172	.	+	.	5RACE208_chr19_59847174_59847202-08246F06
chr19	exonerate:est2genome	exon	59847198	59847229	.	+	.	5RACE208_chr19_59847174_59847202-08246H06
chr19	exonerate:est2genome	exon	59866083	59866331	.	+	.	5RACE208_chr19_59847174_59847202-08246H06
chr19	exonerate:est2genome	exon	59866802	59866837	.	+	.	5RACE208_chr19_59847174_59847202-08246H06
chr19	exonerate:est2genome	exon	59867024	59867215	.	+	.	5RACE208_chr19_59847174_59847202-08246H06
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE208_chr19_59847174_59847202" visibility=3 color=160,30,100
chr19	exonerate:est2genome	exon	59847178	59847229	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866083	59866331	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59866802	59866837	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59867024	59867225	.	+	.	5RACE208_chr19_59847174_59847202-10a09.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE208_chr19_59847174_59847202" visibility=3 color=240,40,200
chr19	Known	exon	59847178	59847229	.	+	.	AC011515.1-010
chr19	Known	exon	59866083	59866331	.	+	.	AC011515.1-010
chr19	Known	CDS	59866298	59866331	.	+	0	AC011515.1-010
chr19	Known	start_codon	59866298	59866300	.	+	0	AC011515.1-010
chr19	Known	exon	59866802	59866837	.	+	.	AC011515.1-010
chr19	Known	CDS	59866802	59866837	.	+	2	AC011515.1-010
chr19	Known	exon	59867024	59867225	.	+	.	AC011515.1-010
chr19	Known	CDS	59867024	59867225	.	+	2	AC011515.1-010
