browser position  chr19:59833688-59834926
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE207_chr19_59833688_59833727 Placenta" visibility=3 color=255,0,0
chr19	target	racefrag	59833688	59833727	+	.	.	5RACE207_chr19_59833688_59833727
chr19	target	racefrag	59834763	59834926	+	.	.	5RACE207_chr19_59833688_59833727
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE207_chr19_59833688_59833727 Placenta" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE207_chr19_59833688_59833727 Placenta" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE207_chr19_59833688_59833727 Placenta" visibility=3 color=20,20,255
chr19	RTPCR_pool23	RTPCRfrag	59833688	59833888	.	.	.	5RACE207_chr19_59833688_59833727
chr19	RTPCR_pool23	RTPCRfrag	59834255	59834361	.	.	.	5RACE207_chr19_59833688_59833727
chr19	RTPCR_pool23	RTPCRfrag	59834540	59834576	.	.	.	5RACE207_chr19_59833688_59833727
chr19	RTPCR_pool23	RTPCRfrag	59834755	59834787	.	.	.	5RACE207_chr19_59833688_59833727
chr19	RTPCR_pool23	RTPCRfrag	59834829	59834925	.	.	.	5RACE207_chr19_59833688_59833727
track name="RACEfragsBrain" description="RACEfrags AC009892.6-5RACE207 Brain" 
chr19	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	59833754	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_2
chr19	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834565	.	+	.	racefrag_3
chr19	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_4
track name="RACEfragsPlacenta" description="RACEfrags AC009892.6-5RACE207 Placenta" 
chr19	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	59796849	59796858	.	+	.	racefrag_1
chr19	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	59833688	59833727	.	+	.	racefrag_2
chr19	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	59833781	59833888	.	+	.	racefrag_3
chr19	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	59834255	59834361	.	+	.	racefrag_4
chr19	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834565	.	+	.	racefrag_5
chr19	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_6
track name="RACEfragsColon" description="RACEfrags AC009892.6-5RACE207 Colon" 
chr19	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	59833781	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_2
chr19	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834565	.	+	.	racefrag_3
chr19	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	59834763	59834787	.	+	.	racefrag_4
chr19	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	59834861	59834944	.	+	.	racefrag_5
track name="RACEfragsSmall_Intest" description="RACEfrags AC009892.6-5RACE207 Small_Intest" 
chr19	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	59833803	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_2
chr19	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834561	.	+	.	racefrag_3
chr19	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	59834909	59834944	.	+	.	racefrag_4
track name="RACEfragsHeart" description="RACEfrags AC009892.6-5RACE207 Heart" 
chr19	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	59833754	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_2
chr19	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834561	.	+	.	racefrag_3
chr19	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_4
track name="RACEfragsSpleen" description="RACEfrags AC009892.6-5RACE207 Spleen" 
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59833747	59833907	.	+	.	racefrag_1
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59834208	59834370	.	+	.	racefrag_2
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59834371	59834465	.	+	.	racefrag_3
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59834527	59834569	.	+	.	racefrag_4
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59834763	59834787	.	+	.	racefrag_5
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59834829	59834861	.	+	.	racefrag_6
chr19	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_7
track name="RACEfragsKidney" description="RACEfrags AC009892.6-5RACE207 Kidney" 
chr19	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	59833747	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834370	.	+	.	racefrag_2
chr19	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834565	.	+	.	racefrag_3
chr19	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	59834829	59834861	.	+	.	racefrag_4
chr19	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_5
track name="RACEfragsStomach" description="RACEfrags AC009892.6-5RACE207 Stomach" 
chr19	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	59833754	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_2
chr19	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834565	.	+	.	racefrag_3
chr19	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	59834829	59834861	.	+	.	racefrag_4
chr19	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_5
track name="RACEfragsLung" description="RACEfrags AC009892.6-5RACE207 Lung" 
chr19	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	59833747	59833888	.	+	.	racefrag_1
chr19	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_2
chr19	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	59834540	59834561	.	+	.	racefrag_3
chr19	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_4
track name="RACEfragsTesti" description="RACEfrags AC009892.6-5RACE207 Testi" 
chr19	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	59833747	59833754	.	+	.	racefrag_1
chr19	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	59833803	59833888	.	+	.	racefrag_2
chr19	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_3
track name="RACEfragsMuscle" description="RACEfrags AC009892.6-5RACE207 Muscle" 
chr19	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	59834280	59834361	.	+	.	racefrag_1
chr19	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_2
track name="RACEfragsLiver" description="RACEfrags AC009892.6-5RACE207 Liver" 
chr19	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_1
track name="RACEfragsGM06990" description="RACEfrags AC009892.6-5RACE207 GM06990" 
chr19	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	59833747	59833754	.	+	.	racefrag_1
chr19	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	59833803	59833888	.	+	.	racefrag_2
chr19	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_3
chr19	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	59834540	59834561	.	+	.	racefrag_4
chr19	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	59834767	59834787	.	+	.	racefrag_5
track name="RACEfragsHL60" description="RACEfrags AC009892.6-5RACE207 HL60" 
chr19	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	59834302	59834361	.	+	.	racefrag_1
chr19	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	59834540	59834561	.	+	.	racefrag_2
chr19	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	59834902	59834944	.	+	.	racefrag_3
track name="RACEfragsHeLa" description="RACEfrags AC009892.6-5RACE207 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE207_chr19_59833688_59833727 Placenta" visibility=0 color=160,30,200
chr19	exonerate:est2genome	exon	59833697	59833896	.	+	.	5RACE207_chr19_59833688_59833727-10b08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834289	59834370	.	+	.	5RACE207_chr19_59833688_59833727-10b08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834534	59834569	.	+	.	5RACE207_chr19_59833688_59833727-10b08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834763	59834927	.	+	.	5RACE207_chr19_59833688_59833727-10b08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59833697	59833896	.	+	.	5RACE207_chr19_59833688_59833727-10c08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834289	59834370	.	+	.	5RACE207_chr19_59833688_59833727-10c08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834534	59834569	.	+	.	5RACE207_chr19_59833688_59833727-10c08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834763	59834927	.	+	.	5RACE207_chr19_59833688_59833727-10c08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59796909	59797058	.	+	.	5RACE207_chr19_59833688_59833727-10d08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59797718	59797753	.	+	.	5RACE207_chr19_59833688_59833727-10d08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59797942	59798106	.	+	.	5RACE207_chr19_59833688_59833727-10d08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59833671	59833896	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834289	59834370	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834534	59834569	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834763	59834927	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59833697	59833896	.	+	.	5RACE207_chr19_59833688_59833727-10h08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834289	59834370	.	+	.	5RACE207_chr19_59833688_59833727-10h08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834534	59834569	.	+	.	5RACE207_chr19_59833688_59833727-10h08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834763	59834927	.	+	.	5RACE207_chr19_59833688_59833727-10h08.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE207_chr19_59833688_59833727" visibility=3 color=160,30,100
chr19	exonerate:est2genome	exon	59833671	59833896	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834289	59834370	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834534	59834569	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59834763	59834927	.	+	.	5RACE207_chr19_59833688_59833727-10e08.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE207_chr19_59833688_59833727" visibility=3 color=240,40,200
chr19	Known	exon	59833673	59833896	.	+	.	AC009892.6-001
chr19	Known	exon	59834289	59834370	.	+	.	AC009892.6-001
chr19	Known	CDS	59834337	59834370	.	+	0	AC009892.6-001
chr19	Known	start_codon	59834337	59834339	.	+	0	AC009892.6-001
chr19	Known	exon	59834534	59834569	.	+	.	AC009892.6-001
chr19	Known	CDS	59834534	59834569	.	+	2	AC009892.6-001
chr19	Known	exon	59834763	59835050	.	+	.	AC009892.6-001
chr19	Known	CDS	59834763	59835050	.	+	2	AC009892.6-001
chr19	Known	exon	59835198	59835500	.	+	.	AC009892.6-001
chr19	Known	CDS	59835198	59835500	.	+	2	AC009892.6-001
chr19	Known	exon	59835727	59836023	.	+	.	AC009892.6-001
chr19	Known	CDS	59835727	59836023	.	+	2	AC009892.6-001
chr19	Known	exon	59836279	59836581	.	+	.	AC009892.6-001
chr19	Known	CDS	59836279	59836581	.	+	2	AC009892.6-001
chr19	Known	exon	59836901	59836951	.	+	.	AC009892.6-001
chr19	Known	CDS	59836901	59836951	.	+	2	AC009892.6-001
chr19	Known	exon	59837234	59837284	.	+	.	AC009892.6-001
chr19	Known	CDS	59837234	59837284	.	+	2	AC009892.6-001
chr19	Known	exon	59837904	59838026	.	+	.	AC009892.6-001
chr19	Known	CDS	59837904	59838026	.	+	2	AC009892.6-001
chr19	Known	exon	59838367	59838442	.	+	.	AC009892.6-001
chr19	Known	CDS	59838367	59838442	.	+	2	AC009892.6-001
chr19	Known	exon	59838522	59838559	.	+	.	AC009892.6-001
chr19	Known	CDS	59838522	59838559	.	+	1	AC009892.6-001
chr19	Known	exon	59838820	59838872	.	+	.	AC009892.6-001
chr19	Known	CDS	59838820	59838872	.	+	2	AC009892.6-001
chr19	Known	exon	59839760	59839915	.	+	.	AC009892.6-001
chr19	Known	CDS	59839760	59839915	.	+	0	AC009892.6-001
chr19	Known	exon	59839995	59840791	.	+	.	AC009892.6-001
chr19	Known	CDS	59839995	59840138	.	+	0	AC009892.6-001
chr19	Known	stop_codon	59840139	59840141	.	+	0	AC009892.6-001
