browser position  chr19:59618039-59624317
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE201_chr19_59618039_59618247 Brain" visibility=3 color=255,0,0
chr19	target	racefrag	59618039	59618247	+	.	.	5RACE201_chr19_59618039_59618247
chr19	target	racefrag	59624263	59624317	+	.	.	5RACE201_chr19_59618039_59618247
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE201_chr19_59618039_59618247 Brain" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE201_chr19_59618039_59618247 Brain" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE201_chr19_59618039_59618247 Brain" visibility=3 color=20,20,255
chr19	RTPCR_pool15	RTPCRfrag	59618039	59618121	.	.	.	5RACE201_chr19_59618039_59618247
chr19	RTPCR_pool15	RTPCRfrag	59618163	59618268	.	.	.	5RACE201_chr19_59618039_59618247
chr19	RTPCR_pool15	RTPCRfrag	59618557	59618645	.	.	.	5RACE201_chr19_59618039_59618247
chr19	RTPCR_pool15	RTPCRfrag	59621533	59621612	.	.	.	5RACE201_chr19_59618039_59618247
chr19	RTPCR_pool15	RTPCRfrag	59622091	59622282	.	.	.	5RACE201_chr19_59618039_59618247
chr19	RTPCR_pool15	RTPCRfrag	59624091	59624132	.	.	.	5RACE201_chr19_59618039_59618247
chr19	RTPCR_pool15	RTPCRfrag	59624226	59624298	.	.	.	5RACE201_chr19_59618039_59618247
track name="RACEfragsBrain" description="RACEfrags AC008746.2-5RACE201 Brain" 
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59618039	59618247	.	+	.	racefrag_1
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59618557	59618645	.	+	.	racefrag_2
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59619776	59619898	.	+	.	racefrag_3
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59622091	59622113	.	+	.	racefrag_4
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59622114	59622282	.	+	.	racefrag_5
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59624091	59624132	.	+	.	racefrag_6
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59624226	59624262	.	+	.	racefrag_7
chr19	5pr_Known_Brain-3_signal.bed_COR.bed	fragmented_racefrag	59624263	59624298	.	+	.	racefrag_8
track name="RACEfragsPlacenta" description="RACEfrags AC008746.2-5RACE201 Placenta" 
track name="RACEfragsColon" description="RACEfrags AC008746.2-5RACE201 Colon" 
chr19	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	59324498	59324547	.	+	.	racefrag_1
chr19	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	59326604	59326687	.	+	.	racefrag_2
chr19	5pr_Known_Colon-3_signal.bed_COR.bed	fragmented_racefrag	59622158	59622282	.	+	.	racefrag_3
track name="RACEfragsSmall_Intest" description="RACEfrags AC008746.2-5RACE201 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags AC008746.2-5RACE201 Heart" 
track name="RACEfragsSpleen" description="RACEfrags AC008746.2-5RACE201 Spleen" 
chr19	5pr_Known_Spleen-3_signal.bed_COR.bed	fragmented_racefrag	59622158	59622282	.	+	.	racefrag_1
track name="RACEfragsKidney" description="RACEfrags AC008746.2-5RACE201 Kidney" 
track name="RACEfragsStomach" description="RACEfrags AC008746.2-5RACE201 Stomach" 
chr19	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	59318663	59318684	.	+	.	racefrag_1
chr19	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	59326542	59326549	.	+	.	racefrag_2
chr19	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	59326550	59326564	.	+	.	racefrag_3
chr19	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	59619689	59619710	.	+	.	racefrag_4
chr19	5pr_Known_Stomach-3_signal.bed_COR.bed	fragmented_racefrag	59622236	59622282	.	+	.	racefrag_5
track name="RACEfragsLung" description="RACEfrags AC008746.2-5RACE201 Lung" 
track name="RACEfragsTesti" description="RACEfrags AC008746.2-5RACE201 Testi" 
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59352321	59352356	.	+	.	racefrag_1
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59618121	59618247	.	+	.	racefrag_2
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59618557	59618645	.	+	.	racefrag_3
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59621270	59621310	.	+	.	racefrag_4
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59621533	59621612	.	+	.	racefrag_5
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59622116	59622282	.	+	.	racefrag_6
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59624226	59624262	.	+	.	racefrag_7
chr19	5pr_Known_Testi-3_signal.bed_COR.bed	fragmented_racefrag	59624263	59624298	.	+	.	racefrag_8
track name="RACEfragsMuscle" description="RACEfrags AC008746.2-5RACE201 Muscle" 
track name="RACEfragsLiver" description="RACEfrags AC008746.2-5RACE201 Liver" 
track name="RACEfragsGM06990" description="RACEfrags AC008746.2-5RACE201 GM06990" 
track name="RACEfragsHL60" description="RACEfrags AC008746.2-5RACE201 HL60" 
track name="RACEfragsHeLa" description="RACEfrags AC008746.2-5RACE201 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE201_chr19_59618039_59618247 Brain" visibility=0 color=160,30,200
chr19	exonerate:est2genome	exon	59618185	59618280	.	+	.	5RACE201_chr19_59618039_59618247-10d04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59622114	59622292	.	+	.	5RACE201_chr19_59618039_59618247-10d04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59624263	59624317	.	+	.	5RACE201_chr19_59618039_59618247-10d04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59618185	59618280	.	+	.	5RACE201_chr19_59618039_59618247-10e04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59622114	59622292	.	+	.	5RACE201_chr19_59618039_59618247-10e04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59624263	59624317	.	+	.	5RACE201_chr19_59618039_59618247-10e04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59618185	59618280	.	+	.	5RACE201_chr19_59618039_59618247-10h04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59622114	59622292	.	+	.	5RACE201_chr19_59618039_59618247-10h04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59624263	59624317	.	+	.	5RACE201_chr19_59618039_59618247-10h04.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE201_chr19_59618039_59618247" visibility=3 color=160,30,100
chr19	exonerate:est2genome	exon	59618185	59618280	.	+	.	5RACE201_chr19_59618039_59618247-10d04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59622114	59622292	.	+	.	5RACE201_chr19_59618039_59618247-10d04.fasta.screen.Contig1
chr19	exonerate:est2genome	exon	59624263	59624317	.	+	.	5RACE201_chr19_59618039_59618247-10d04.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE201_chr19_59618039_59618247" visibility=3 color=240,40,200
chr19	Known	exon	59618185	59618280	.	+	.	AC008746.2-010
chr19	Known	CDS	59618239	59618280	.	+	0	AC008746.2-010
chr19	Known	start_codon	59618239	59618241	.	+	0	AC008746.2-010
chr19	Known	exon	59622114	59622292	.	+	.	AC008746.2-010
chr19	Known	CDS	59622114	59622292	.	+	0	AC008746.2-010
chr19	Known	exon	59624263	59624317	.	+	.	AC008746.2-010
chr19	Known	CDS	59624263	59624317	.	+	1	AC008746.2-010
