browser position  chr21:33088400-33107935
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE183_chr21_33107870_33107935 Brain" visibility=3 color=255,0,0
chr21	target	racefrag	33107870	33107935	-	.	.	5RACE183_chr21_33107870_33107935
chr21	target	racefrag	33088400	33088666	-	.	.	5RACE183_chr21_33107870_33107935
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE183_chr21_33107870_33107935 Brain" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE183_chr21_33107870_33107935 Brain" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE183_chr21_33107870_33107935 Brain" visibility=3 color=20,20,255
chr21	RTPCR_pool3	RTPCRfrag	33088411	33088727	.	.	.	5RACE183_chr21_33107870_33107935
chr21	RTPCR_pool3	RTPCRfrag	33088887	33088930	.	.	.	5RACE183_chr21_33107870_33107935
chr21	RTPCR_pool3	RTPCRfrag	33088995	33089063	.	.	.	5RACE183_chr21_33107870_33107935
chr21	RTPCR_pool3	RTPCRfrag	33107779	33107910	.	.	.	5RACE183_chr21_33107870_33107935
track name="RACEfragsBrain" description="RACEfrags AP000280.67-5RACE183 Brain" 
chr21	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107869	.	+	.	racefrag_1
chr21	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	33107870	33107935	.	+	.	racefrag_2
track name="RACEfragsPlacenta" description="RACEfrags AP000280.67-5RACE183 Placenta" 
chr21	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107844	.	+	.	racefrag_1
track name="RACEfragsColon" description="RACEfrags AP000280.67-5RACE183 Colon" 
chr21	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	33107825	33107869	.	+	.	racefrag_1
chr21	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	33107870	33107910	.	+	.	racefrag_2
track name="RACEfragsSmall_Intest" description="RACEfrags AP000280.67-5RACE183 Small_Intest" 
chr21	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	33101846	33101893	.	+	.	racefrag_1
chr21	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107869	.	+	.	racefrag_2
chr21	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	33107870	33107910	.	+	.	racefrag_3
track name="RACEfragsHeart" description="RACEfrags AP000280.67-5RACE183 Heart" 
chr21	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107844	.	+	.	racefrag_1
track name="RACEfragsSpleen" description="RACEfrags AP000280.67-5RACE183 Spleen" 
chr21	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	33088427	33088650	.	+	.	racefrag_1
chr21	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	33101846	33101893	.	+	.	racefrag_2
chr21	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107865	.	+	.	racefrag_3
track name="RACEfragsKidney" description="RACEfrags AP000280.67-5RACE183 Kidney" 
track name="RACEfragsStomach" description="RACEfrags AP000280.67-5RACE183 Stomach" 
chr21	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	33101846	33101893	.	+	.	racefrag_1
chr21	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107869	.	+	.	racefrag_2
chr21	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	33107870	33107910	.	+	.	racefrag_3
track name="RACEfragsLung" description="RACEfrags AP000280.67-5RACE183 Lung" 
chr21	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107865	.	+	.	racefrag_1
track name="RACEfragsTesti" description="RACEfrags AP000280.67-5RACE183 Testi" 
chr21	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	33101846	33101893	.	+	.	racefrag_1
chr21	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107865	.	+	.	racefrag_2
chr21	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	33134240	33134261	.	+	.	racefrag_3
chr21	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	33134299	33134320	.	+	.	racefrag_4
track name="RACEfragsMuscle" description="RACEfrags AP000280.67-5RACE183 Muscle" 
track name="RACEfragsLiver" description="RACEfrags AP000280.67-5RACE183 Liver" 
chr21	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	33107779	33107869	.	+	.	racefrag_1
chr21	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	33107870	33107910	.	+	.	racefrag_2
track name="RACEfragsGM06990" description="RACEfrags AP000280.67-5RACE183 GM06990" 
chr21	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	33088489	33088553	.	+	.	racefrag_1
chr21	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	33088603	33088650	.	+	.	racefrag_2
chr21	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	33107779	33107803	.	+	.	racefrag_3
chr21	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	34187268	34187289	.	+	.	racefrag_4
chr21	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	34193538	34193559	.	+	.	racefrag_5
chr21	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	34203306	34203327	.	+	.	racefrag_6
track name="RACEfragsHL60" description="RACEfrags AP000280.67-5RACE183 HL60" 
track name="RACEfragsHeLa" description="RACEfrags AP000280.67-5RACE183 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE183_chr21_33107870_33107935 Brain" visibility=0 color=160,30,200
chr21	exonerate:est2genome	exon	33088400	33088666	.	+	.	5RACE183_chr21_33107870_33107935-supplC
chr21	exonerate:est2genome	exon	33104754	33104834	.	+	.	5RACE183_chr21_33107870_33107935-supplC
chr21	exonerate:est2genome	exon	33107772	33107923	.	+	.	5RACE183_chr21_33107870_33107935-supplC
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE183_chr21_33107870_33107935" visibility=3 color=160,30,100
chr21	exonerate:est2genome	exon	33088400	33088666	.	+	.	5RACE183_chr21_33107870_33107935-supplC
chr21	exonerate:est2genome	exon	33104754	33104834	.	+	.	5RACE183_chr21_33107870_33107935-supplC
chr21	exonerate:est2genome	exon	33107772	33107923	.	+	.	5RACE183_chr21_33107870_33107935-supplC
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE183_chr21_33107870_33107935" visibility=3 color=240,40,200
chr21	Known	exon	33107772	33107923	.	-	.	AP000280.67-001
chr21	Known	exon	33104754	33104834	.	-	.	AP000280.67-001
chr21	Known	exon	33087746	33088666	.	-	.	AP000280.67-001
chr21	Known	CDS	33087862	33088602	.	-	0	AP000280.67-001
chr21	Known	start_codon	33088600	33088602	.	-	0	AP000280.67-001
chr21	Known	stop_codon	33087859	33087861	.	-	0	AP000280.67-001
