browser position  chr5:131905654-131907510
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE155_chr5_131907481_131907503 Testi" visibility=3 color=255,0,0
chr5	target	racefrag	131907481	131907503	-	.	.	5RACE155_chr5_131907481_131907503
chr5	target	racefrag	131905654	131905734	-	.	.	5RACE155_chr5_131907481_131907503
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE155_chr5_131907481_131907503 Testi" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE155_chr5_131907481_131907503 Testi" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE155_chr5_131907481_131907503 Testi" visibility=3 color=20,20,255
chr5	RTPCR_pool33	RTPCRfrag	131905673	131905785	.	.	.	5RACE155_chr5_131907481_131907503
chr5	RTPCR_pool33	RTPCRfrag	131906695	131906822	.	.	.	5RACE155_chr5_131907481_131907503
chr5	RTPCR_pool33	RTPCRfrag	131906867	131907219	.	.	.	5RACE155_chr5_131907481_131907503
chr5	RTPCR_pool33	RTPCRfrag	131907308	131907348	.	.	.	5RACE155_chr5_131907481_131907503
chr5	RTPCR_pool33	RTPCRfrag	131907394	131907434	.	.	.	5RACE155_chr5_131907481_131907503
chr5	RTPCR_pool33	RTPCRfrag	131907481	131907503	.	.	.	5RACE155_chr5_131907481_131907503
track name="RACEfragsBrain" description="RACEfrags AC116366.2-5RACE155 Brain" 
chr5	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	131905673	131905719	.	+	.	racefrag_1
chr5	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	131906949	131906991	.	+	.	racefrag_2
chr5	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	131907038	131907081	.	+	.	racefrag_3
chr5	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	132045633	132045654	.	+	.	racefrag_4
chr5	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	132045883	132045929	.	+	.	racefrag_5
track name="RACEfragsPlacenta" description="RACEfrags AC116366.2-5RACE155 Placenta" 
track name="RACEfragsColon" description="RACEfrags AC116366.2-5RACE155 Colon" 
chr5	5pr_Known_Colon-1_signal.bed_COR.bed	fragmented_racefrag	131905673	131905719	.	+	.	racefrag_1
track name="RACEfragsSmall_Intest" description="RACEfrags AC116366.2-5RACE155 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags AC116366.2-5RACE155 Heart" 
track name="RACEfragsSpleen" description="RACEfrags AC116366.2-5RACE155 Spleen" 
track name="RACEfragsKidney" description="RACEfrags AC116366.2-5RACE155 Kidney" 
track name="RACEfragsStomach" description="RACEfrags AC116366.2-5RACE155 Stomach" 
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131905673	131905734	.	+	.	racefrag_1
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131905735	131905785	.	+	.	racefrag_2
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131906015	131906040	.	+	.	racefrag_3
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131906570	131906661	.	+	.	racefrag_4
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131906740	131906822	.	+	.	racefrag_5
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131906867	131906925	.	+	.	racefrag_6
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131906926	131906928	.	+	.	racefrag_7
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131907327	131907348	.	+	.	racefrag_8
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131907394	131907415	.	+	.	racefrag_9
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131907481	131907503	.	+	.	racefrag_10
chr5	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	131907568	131907589	.	+	.	racefrag_11
track name="RACEfragsLung" description="RACEfrags AC116366.2-5RACE155 Lung" 
chr5	5pr_Known_Lung-1_signal.bed_COR.bed	fragmented_racefrag	131905673	131905719	.	+	.	racefrag_1
chr5	5pr_Known_Lung-1_signal.bed_COR.bed	fragmented_racefrag	131906949	131906970	.	+	.	racefrag_2
chr5	5pr_Known_Lung-1_signal.bed_COR.bed	fragmented_racefrag	131907038	131907103	.	+	.	racefrag_3
chr5	5pr_Known_Lung-1_signal.bed_COR.bed	fragmented_racefrag	132194094	132194115	.	+	.	racefrag_4
track name="RACEfragsTesti" description="RACEfrags AC116366.2-5RACE155 Testi" 
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	131905673	131905734	.	+	.	racefrag_1
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	131905735	131905785	.	+	.	racefrag_2
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	131906928	131906991	.	+	.	racefrag_3
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	131907038	131907113	.	+	.	racefrag_4
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	131907481	131907503	.	+	.	racefrag_5
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	131908519	131908622	.	+	.	racefrag_6
chr5	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	132194094	132194115	.	+	.	racefrag_7
track name="RACEfragsMuscle" description="RACEfrags AC116366.2-5RACE155 Muscle" 
track name="RACEfragsLiver" description="RACEfrags AC116366.2-5RACE155 Liver" 
track name="RACEfragsGM06990" description="RACEfrags AC116366.2-5RACE155 GM06990" 
track name="RACEfragsHL60" description="RACEfrags AC116366.2-5RACE155 HL60" 
chr5	GeCo_5prRACE_Alex_HL60_pool_1_signal.bed.mod	fragmented_racefrag	131905673	131905719	.	+	.	racefrag_1
track name="RACEfragsHeLa" description="RACEfrags AC116366.2-5RACE155 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE155_chr5_131907481_131907503 Testi" visibility=0 color=160,30,200
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8a03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131906717	.	+	.	5RACE155_chr5_131907481_131907503-8a03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131918747	131918848	.	+	.	5RACE155_chr5_131907481_131907503-8a03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131920265	131920406	.	+	.	5RACE155_chr5_131907481_131907503-8a03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8b03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131906717	.	+	.	5RACE155_chr5_131907481_131907503-8b03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131918747	131918848	.	+	.	5RACE155_chr5_131907481_131907503-8b03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131920265	131920377	.	+	.	5RACE155_chr5_131907481_131907503-8b03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131920253	131920383	.	+	.	5RACE155_chr5_131907481_131907503-8c03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8d03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131906717	.	+	.	5RACE155_chr5_131907481_131907503-8d03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131918747	131918848	.	+	.	5RACE155_chr5_131907481_131907503-8d03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131920265	131920388	.	+	.	5RACE155_chr5_131907481_131907503-8d03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8e03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131907511	.	+	.	5RACE155_chr5_131907481_131907503-8e03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8f03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131906717	.	+	.	5RACE155_chr5_131907481_131907503-8f03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131918747	131918848	.	+	.	5RACE155_chr5_131907481_131907503-8f03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131920265	131920389	.	+	.	5RACE155_chr5_131907481_131907503-8f03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8g03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131907511	.	+	.	5RACE155_chr5_131907481_131907503-8g03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8h03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131907511	.	+	.	5RACE155_chr5_131907481_131907503-8h03.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE155_chr5_131907481_131907503" visibility=3 color=160,30,100
chr5	exonerate:est2genome	exon	131905657	131905734	.	+	.	5RACE155_chr5_131907481_131907503-8e03.fasta.screen.Contig1
chr5	exonerate:est2genome	exon	131906685	131907511	.	+	.	5RACE155_chr5_131907481_131907503-8e03.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE155_chr5_131907481_131907503" visibility=3 color=240,40,200
chr5	Known	exon	131906685	131907511	.	-	.	AC116366.2-003
chr5	Known	exon	131905657	131905734	.	-	.	AC116366.2-003
