browser position  chrX:153234089-153234779
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE095_chrX_153234089_153234161 Placenta" visibility=3 color=255,0,0
chrX	target	racefrag	153234089	153234161	+	.	.	5RACE095_chrX_153234089_153234161
chrX	target	racefrag	153234571	153234779	+	.	.	5RACE095_chrX_153234089_153234161
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE095_chrX_153234089_153234161 Placenta" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE095_chrX_153234089_153234161 Placenta" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE095_chrX_153234089_153234161 Placenta" visibility=3 color=20,20,255
chrX	RTPCR_pool25	RTPCRfrag	153234089	153234295	.	.	.	5RACE095_chrX_153234089_153234161
chrX	RTPCR_pool25	RTPCRfrag	153234436	153234763	.	.	.	5RACE095_chrX_153234089_153234161
track name="RACEfragsBrain" description="RACEfrags XX-FW81657B9.1-5RACE095 Brain" 
chrX	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	153234185	153234295	.	+	.	racefrag_1
chrX	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_2
chrX	5pr_Known_Brain-2_signal.bed_COR.bed	fragmented_racefrag	153234586	153234763	.	+	.	racefrag_3
track name="RACEfragsPlacenta" description="RACEfrags XX-FW81657B9.1-5RACE095 Placenta" 
chrX	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	152734178	152734199	.	+	.	racefrag_1
chrX	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	153234089	153234161	.	+	.	racefrag_2
chrX	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	153234162	153234247	.	+	.	racefrag_3
chrX	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_4
chrX	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	153234492	153234566	.	+	.	racefrag_5
chrX	5pr_Known_Placenta-2_signal.bed_COR.bed	fragmented_racefrag	153234603	153234763	.	+	.	racefrag_6
track name="RACEfragsColon" description="RACEfrags XX-FW81657B9.1-5RACE095 Colon" 
chrX	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	153234089	153234161	.	+	.	racefrag_1
chrX	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	153234162	153234295	.	+	.	racefrag_2
chrX	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_3
chrX	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	153234492	153234570	.	+	.	racefrag_4
chrX	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234666	.	+	.	racefrag_5
chrX	5pr_Known_Colon-2_signal.bed_COR.bed	fragmented_racefrag	153234707	153234763	.	+	.	racefrag_6
track name="RACEfragsSmall_Intest" description="RACEfrags XX-FW81657B9.1-5RACE095 Small_Intest" 
chrX	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	153234128	153234161	.	+	.	racefrag_1
chrX	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	153234162	153234295	.	+	.	racefrag_2
chrX	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_3
chrX	5pr_Known_Small_Intest-2_signal.bed_COR.bed	fragmented_racefrag	153234586	153234763	.	+	.	racefrag_4
track name="RACEfragsHeart" description="RACEfrags XX-FW81657B9.1-5RACE095 Heart" 
chrX	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	153169857	153169893	.	+	.	racefrag_1
chrX	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	153234185	153234247	.	+	.	racefrag_2
chrX	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	153234389	153234424	.	+	.	racefrag_3
chrX	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	153234425	153234457	.	+	.	racefrag_4
chrX	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	153234521	153234570	.	+	.	racefrag_5
chrX	5pr_Known_Heart-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_6
track name="RACEfragsSpleen" description="RACEfrags XX-FW81657B9.1-5RACE095 Spleen" 
chrX	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	152651761	152651787	.	+	.	racefrag_1
chrX	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	153234185	153234295	.	+	.	racefrag_2
chrX	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	153234416	153234424	.	+	.	racefrag_3
chrX	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	153234425	153234457	.	+	.	racefrag_4
chrX	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	153234492	153234570	.	+	.	racefrag_5
chrX	5pr_Known_Spleen-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_6
track name="RACEfragsKidney" description="RACEfrags XX-FW81657B9.1-5RACE095 Kidney" 
chrX	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	153234185	153234295	.	+	.	racefrag_1
chrX	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_2
chrX	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	153234492	153234570	.	+	.	racefrag_3
chrX	5pr_Known_Kidney-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_4
track name="RACEfragsStomach" description="RACEfrags XX-FW81657B9.1-5RACE095 Stomach" 
chrX	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	152797911	152797954	.	+	.	racefrag_1
chrX	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	152797999	152798034	.	+	.	racefrag_2
chrX	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	153234185	153234295	.	+	.	racefrag_3
chrX	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234479	.	+	.	racefrag_4
chrX	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	153234480	153234570	.	+	.	racefrag_5
chrX	5pr_Known_Stomach-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_6
track name="RACEfragsLung" description="RACEfrags XX-FW81657B9.1-5RACE095 Lung" 
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234144	153234161	.	+	.	racefrag_1
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234162	153234185	.	+	.	racefrag_2
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234389	153234424	.	+	.	racefrag_3
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234425	153234457	.	+	.	racefrag_4
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234521	153234570	.	+	.	racefrag_5
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234666	.	+	.	racefrag_6
chrX	5pr_Known_Lung-2_signal.bed_COR.bed	fragmented_racefrag	153234707	153234763	.	+	.	racefrag_7
track name="RACEfragsTesti" description="RACEfrags XX-FW81657B9.1-5RACE095 Testi" 
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	152734262	152734323	.	+	.	racefrag_1
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	152734366	152734402	.	+	.	racefrag_2
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	152734537	152734600	.	+	.	racefrag_3
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	153234144	153234161	.	+	.	racefrag_4
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	153234162	153234185	.	+	.	racefrag_5
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_6
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	153234586	153234666	.	+	.	racefrag_7
chrX	5pr_Known_Testi-2_signal.bed_COR.bed	fragmented_racefrag	153234707	153234763	.	+	.	racefrag_8
track name="RACEfragsMuscle" description="RACEfrags XX-FW81657B9.1-5RACE095 Muscle" 
chrX	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	153234185	153234295	.	+	.	racefrag_1
chrX	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	153234389	153234424	.	+	.	racefrag_2
chrX	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	153234425	153234457	.	+	.	racefrag_3
chrX	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	153234521	153234570	.	+	.	racefrag_4
chrX	5pr_Known_Muscle-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_5
track name="RACEfragsLiver" description="RACEfrags XX-FW81657B9.1-5RACE095 Liver" 
chrX	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	153234389	153234424	.	+	.	racefrag_1
chrX	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	153234425	153234457	.	+	.	racefrag_2
chrX	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	153234521	153234570	.	+	.	racefrag_3
chrX	5pr_Known_Liver-2_signal.bed_COR.bed	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_4
track name="RACEfragsGM06990" description="RACEfrags XX-FW81657B9.1-5RACE095 GM06990" 
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	152651697	152651719	.	+	.	racefrag_1
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	152718488	152718516	.	+	.	racefrag_2
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	153234144	153234161	.	+	.	racefrag_3
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	153234162	153234295	.	+	.	racefrag_4
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	153234389	153234424	.	+	.	racefrag_5
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	153234425	153234457	.	+	.	racefrag_6
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	153234566	153234570	.	+	.	racefrag_7
chrX	GeCo_5prRACE_Alex_GM06990_pool_2_signal.bed.mod	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_8
track name="RACEfragsHL60" description="RACEfrags XX-FW81657B9.1-5RACE095 HL60" 
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	152797911	152797931	.	+	.	racefrag_1
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	153170189	153170209	.	+	.	racefrag_2
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	153234089	153234161	.	+	.	racefrag_3
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	153234162	153234295	.	+	.	racefrag_4
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	153234436	153234457	.	+	.	racefrag_5
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	153234492	153234570	.	+	.	racefrag_6
chrX	GeCo_5prRACE_Alex_HL60_pool_2_signal.bed.mod	fragmented_racefrag	153234571	153234763	.	+	.	racefrag_7
track name="RACEfragsHeLa" description="RACEfrags XX-FW81657B9.1-5RACE095 HeLa" 
chrX	5pr_Known_HeLa-2_signal.bed.mod	fragmented_racefrag	153234424	153234424	.	+	.	racefrag_1
chrX	5pr_Known_HeLa-2_signal.bed.mod	fragmented_racefrag	153234425	153234444	.	+	.	racefrag_2
chrX	5pr_Known_HeLa-2_signal.bed.mod	fragmented_racefrag	153234554	153234570	.	+	.	racefrag_3
chrX	5pr_Known_HeLa-2_signal.bed.mod	fragmented_racefrag	153234571	153234710	.	+	.	racefrag_4
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE095_chrX_153234089_153234161 Placenta" visibility=0 color=160,30,200
chrX	exonerate:est2genome	exon	153234139	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4a09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4a09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4a09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4b09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4b09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4b09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4c09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4c09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4c09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4d09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4d09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4d09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4e09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4e09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4e09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4g09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4g09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4g09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4h09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4h09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4h09.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE095_chrX_153234089_153234161" visibility=3 color=160,30,100
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.	5RACE095_chrX_153234089_153234161-4b09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.	5RACE095_chrX_153234089_153234161-4b09.fasta.screen.Contig1
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.	5RACE095_chrX_153234089_153234161-4b09.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE095_chrX_153234089_153234161" visibility=3 color=240,40,200
chrX	exonerate:est2genome	exon	153234133	153234306	.	+	.
chrX	exonerate:est2genome	exon	153234425	153234479	.	+	.
chrX	exonerate:est2genome	exon	153234571	153234779	.	+	.
