browser position  chr22:31701184-31778399
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE083_chr22_31778284_31778399 Brain" visibility=3 color=255,0,0
chr22	target	racefrag	31778284	31778399	-	.	.	5RACE083_chr22_31778284_31778399
chr22	target	racefrag	31701184	31701241	-	.	.	5RACE083_chr22_31778284_31778399
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE083_chr22_31778284_31778399 Brain" visibility=3 color=20,20,255
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE083_chr22_31778284_31778399 Brain" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE083_chr22_31778284_31778399 Brain" visibility=3 color=20,20,255
chr22	RTPCR_pool14	RTPCRfrag	31701190	31701231	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31726898	31727037	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31727083	31727340	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31772773	31772794	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31772834	31772858	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31773029	31773050	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31777714	31778201	.	.	.	5RACE083_chr22_31778284_31778399
chr22	RTPCR_pool14	RTPCRfrag	31778284	31778399	.	.	.	5RACE083_chr22_31778284_31778399
track name="RACEfragsBrain" description="RACEfrags LL22NC03-28H9.1-5RACE083 Brain" 
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31726898	31727037	.	+	.	racefrag_2
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31727083	31727233	.	+	.	racefrag_3
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31727278	31727321	.	+	.	racefrag_4
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31741258	31741279	.	+	.	racefrag_5
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31772773	31772794	.	+	.	racefrag_6
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31772834	31772914	.	+	.	racefrag_7
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31773007	31773095	.	+	.	racefrag_8
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31777714	31777775	.	+	.	racefrag_9
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31777816	31778201	.	+	.	racefrag_10
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31778284	31778399	.	+	.	racefrag_11
chr22	5pr_Known_Brain-1_signal.bed_COR.bed	fragmented_racefrag	31778838	31778885	.	+	.	racefrag_12
track name="RACEfragsPlacenta" description="RACEfrags LL22NC03-28H9.1-5RACE083 Placenta" 
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31701357	31701379	.	+	.	racefrag_2
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31706139	31706161	.	+	.	racefrag_3
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31717230	31717313	.	+	.	racefrag_4
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31726898	31726938	.	+	.	racefrag_5
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31726979	31727024	.	+	.	racefrag_6
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31727126	31727190	.	+	.	racefrag_7
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31727278	31727300	.	+	.	racefrag_8
chr22	5pr_Known_Placenta-1_signal.bed_COR.bed	fragmented_racefrag	31741258	31741279	.	+	.	racefrag_9
track name="RACEfragsColon" description="RACEfrags LL22NC03-28H9.1-5RACE083 Colon" 
track name="RACEfragsSmall_Intest" description="RACEfrags LL22NC03-28H9.1-5RACE083 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags LL22NC03-28H9.1-5RACE083 Heart" 
chr22	5pr_Known_Heart-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
chr22	5pr_Known_Heart-1_signal.bed_COR.bed	fragmented_racefrag	31726979	31727024	.	+	.	racefrag_2
chr22	5pr_Known_Heart-1_signal.bed_COR.bed	fragmented_racefrag	31787538	31787563	.	+	.	racefrag_3
track name="RACEfragsSpleen" description="RACEfrags LL22NC03-28H9.1-5RACE083 Spleen" 
chr22	5pr_Known_Spleen-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
chr22	5pr_Known_Spleen-1_signal.bed_COR.bed	fragmented_racefrag	31726979	31727024	.	+	.	racefrag_2
chr22	5pr_Known_Spleen-1_signal.bed_COR.bed	fragmented_racefrag	31727126	31727190	.	+	.	racefrag_3
chr22	5pr_Known_Spleen-1_signal.bed_COR.bed	fragmented_racefrag	31727278	31727300	.	+	.	racefrag_4
chr22	5pr_Known_Spleen-1_signal.bed_COR.bed	fragmented_racefrag	31778859	31778885	.	+	.	racefrag_5
track name="RACEfragsKidney" description="RACEfrags LL22NC03-28H9.1-5RACE083 Kidney" 
chr22	5pr_Known_Kidney-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
chr22	5pr_Known_Kidney-1_signal.bed_COR.bed	fragmented_racefrag	31726979	31727024	.	+	.	racefrag_2
chr22	5pr_Known_Kidney-1_signal.bed_COR.bed	fragmented_racefrag	31727169	31727190	.	+	.	racefrag_3
chr22	5pr_Known_Kidney-1_signal.bed_COR.bed	fragmented_racefrag	31778859	31778885	.	+	.	racefrag_4
track name="RACEfragsStomach" description="RACEfrags LL22NC03-28H9.1-5RACE083 Stomach" 
track name="RACEfragsLung" description="RACEfrags LL22NC03-28H9.1-5RACE083 Lung" 
chr22	5pr_Known_Lung-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
track name="RACEfragsTesti" description="RACEfrags LL22NC03-28H9.1-5RACE083 Testi" 
chr22	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	31701207	31701231	.	+	.	racefrag_1
chr22	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	31726979	31727024	.	+	.	racefrag_2
chr22	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	31727126	31727190	.	+	.	racefrag_3
chr22	5pr_Known_Testi-1_signal.bed_COR.bed	fragmented_racefrag	31727278	31727300	.	+	.	racefrag_4
track name="RACEfragsMuscle" description="RACEfrags LL22NC03-28H9.1-5RACE083 Muscle" 
track name="RACEfragsLiver" description="RACEfrags LL22NC03-28H9.1-5RACE083 Liver" 
track name="RACEfragsGM06990" description="RACEfrags LL22NC03-28H9.1-5RACE083 GM06990" 
track name="RACEfragsHL60" description="RACEfrags LL22NC03-28H9.1-5RACE083 HL60" 
track name="RACEfragsHeLa" description="RACEfrags LL22NC03-28H9.1-5RACE083 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE083_chr22_31778284_31778399 Brain" visibility=0 color=160,30,200
chr22	exonerate:est2genome	exon	31701170	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3a10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3a10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778383	.	+	.	5RACE083_chr22_31778284_31778399-3a10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31701170	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3b10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3b10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778383	.	+	.	5RACE083_chr22_31778284_31778399-3b10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31701170	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3c10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3c10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778398	.	+	.	5RACE083_chr22_31778284_31778399-3c10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31701170	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3e10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3e10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778398	.	+	.	5RACE083_chr22_31778284_31778399-3e10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31701170	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3g10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3g10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778398	.	+	.	5RACE083_chr22_31778284_31778399-3g10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31701183	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3h10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3h10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778398	.	+	.	5RACE083_chr22_31778284_31778399-3h10.fasta.screen.Contig1
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE083_chr22_31778284_31778399" visibility=3 color=160,30,100
chr22	exonerate:est2genome	exon	31701170	31701241	.	+	.	5RACE083_chr22_31778284_31778399-3c10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31726891	31727363	.	+	.	5RACE083_chr22_31778284_31778399-3c10.fasta.screen.Contig1
chr22	exonerate:est2genome	exon	31778075	31778398	.	+	.	5RACE083_chr22_31778284_31778399-3c10.fasta.screen.Contig1
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE083_chr22_31778284_31778399" visibility=3 color=240,40,200
chr22	Known	exon	31778075	31778398	.	-	.	LL22NC03-28H9.1-009
chr22	Known	exon	31726891	31727363	.	-	.	LL22NC03-28H9.1-009
chr22	Known	CDS	31726891	31727201	.	-	0	LL22NC03-28H9.1-009
chr22	Known	start_codon	31727199	31727201	.	-	0	LL22NC03-28H9.1-009
chr22	Known	exon	31701184	31701241	.	-	.	LL22NC03-28H9.1-009
chr22	Known	CDS	31701184	31701241	.	-	1	LL22NC03-28H9.1-009
