browser position  chr6:41820176-41829856
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE014_chr6_41829745_41829856 Testi" visibility=3 color=255,0,0
chr6	target	racefrag	41829745	41829856	-	.	.	5RACE014_chr6_41829745_41829856
chr6	target	racefrag	41820176	41820230	-	.	.	5RACE014_chr6_41829745_41829856
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE014_chr6_41829745_41829856 Testi" visibility=3 color=20,20,255
chr6	RTPCR_pool30	RTPCRfrag	41820396	41820500	.	.	.	5RACE014_chr6_41829745_41829856
chr6	RTPCR_pool30	RTPCRfrag	41829627	41829701	.	.	.	5RACE014_chr6_41829745_41829856
chr6	RTPCR_pool30	RTPCRfrag	41829745	41829809	.	.	.	5RACE014_chr6_41829745_41829856
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE014_chr6_41829745_41829856 Testi" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE014_chr6_41829745_41829856 Testi" visibility=3 color=20,20,255
track name="RACEfragsBrain" description="RACEfrags RP11-298J23.1-5RACE014 Brain" 
track name="RACEfragsPlacenta" description="RACEfrags RP11-298J23.1-5RACE014 Placenta" 
chr6	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820417	.	+	.	racefrag_1
chr6	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	41820454	41820500	.	+	.	racefrag_2
chr6	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	41823165	41823233	.	+	.	racefrag_3
track name="RACEfragsColon" description="RACEfrags RP11-298J23.1-5RACE014 Colon" 
track name="RACEfragsSmall_Intest" description="RACEfrags RP11-298J23.1-5RACE014 Small_Intest" 
track name="RACEfragsHeart" description="RACEfrags RP11-298J23.1-5RACE014 Heart" 
chr6	5pr_Known_Heart-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	5pr_Known_Heart-4_signal.bed_COR.bed	fragmented_racefrag	41822994	41823090	.	+	.	racefrag_2
track name="RACEfragsSpleen" description="RACEfrags RP11-298J23.1-5RACE014 Spleen" 
chr6	5pr_Known_Spleen-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	5pr_Known_Spleen-4_signal.bed_COR.bed	fragmented_racefrag	41823011	41823090	.	+	.	racefrag_2
track name="RACEfragsKidney" description="RACEfrags RP11-298J23.1-5RACE014 Kidney" 
chr6	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	41822994	41823109	.	+	.	racefrag_2
chr6	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	41829627	41829701	.	+	.	racefrag_3
chr6	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	41829745	41829809	.	+	.	racefrag_4
chr6	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	41847584	41847669	.	+	.	racefrag_5
track name="RACEfragsStomach" description="RACEfrags RP11-298J23.1-5RACE014 Stomach" 
chr6	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	41820127	41820191	.	+	.	racefrag_1
chr6	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_2
chr6	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	41822994	41823109	.	+	.	racefrag_3
track name="RACEfragsLung" description="RACEfrags RP11-298J23.1-5RACE014 Lung" 
chr6	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	41822994	41823090	.	+	.	racefrag_2
chr6	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	41823165	41823233	.	+	.	racefrag_3
chr6	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	41831684	41831706	.	+	.	racefrag_4
track name="RACEfragsTesti" description="RACEfrags RP11-298J23.1-5RACE014 Testi" 
chr6	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	41822994	41823090	.	+	.	racefrag_2
chr6	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	41829627	41829686	.	+	.	racefrag_3
chr6	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	41829745	41829856	.	+	.	racefrag_4
chr6	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	41830001	41830025	.	+	.	racefrag_5
track name="RACEfragsMuscle" description="RACEfrags RP11-298J23.1-5RACE014 Muscle" 
chr6	5pr_Known_Muscle-4_signal.bed_COR.bed	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	5pr_Known_Muscle-4_signal.bed_COR.bed	fragmented_racefrag	41822994	41823090	.	+	.	racefrag_2
track name="RACEfragsLiver" description="RACEfrags RP11-298J23.1-5RACE014 Liver" 
track name="RACEfragsGM06990" description="RACEfrags RP11-298J23.1-5RACE014 GM06990" 
track name="RACEfragsHL60" description="RACEfrags RP11-298J23.1-5RACE014 HL60" 
chr6	GeCo_5prRACE_Alex_HL60_pool_4_signal.bed.mod	fragmented_racefrag	41820396	41820500	.	+	.	racefrag_1
chr6	GeCo_5prRACE_Alex_HL60_pool_4_signal.bed.mod	fragmented_racefrag	41822994	41823090	.	+	.	racefrag_2
track name="RACEfragsHeLa" description="RACEfrags RP11-298J23.1-5RACE014 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE014_chr6_41829745_41829856 Testi" visibility=0 color=160,30,200
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256B12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256B12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256B12
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256C12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256C12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256C12
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256D12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256D12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256D12
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256E12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256E12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256E12
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256F12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256F12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256F12
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256G12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256G12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256G12
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256H12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256H12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256H12
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE014_chr6_41829745_41829856" visibility=3 color=160,30,100
chr6	exonerate:est2genome	exon	41820195	41820230	.	+	.	5RACE014_chr6_41829745_41829856-08256B12
chr6	exonerate:est2genome	exon	41820374	41820524	.	+	.	5RACE014_chr6_41829745_41829856-08256B12
chr6	exonerate:est2genome	exon	41829614	41829825	.	+	.	5RACE014_chr6_41829745_41829856-08256B12
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE014_chr6_41829745_41829856" visibility=3 color=240,40,200
chr6	Known	exon	41829614	41829825	.	-	.	RP11-298J23.1-004
chr6	Known	CDS	41829614	41829684	.	-	0	RP11-298J23.1-004
chr6	Known	start_codon	41829682	41829684	.	-	0	RP11-298J23.1-004
chr6	Known	exon	41820374	41820524	.	-	.	RP11-298J23.1-004
chr6	Known	CDS	41820374	41820524	.	-	1	RP11-298J23.1-004
chr6	Known	exon	41820195	41820230	.	-	.	RP11-298J23.1-004
chr6	Known	CDS	41820195	41820230	.	-	0	RP11-298J23.1-004
