browser position  chr6:41411364-41412144
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE011_chr6_41411364_41411474 Stomach" visibility=3 color=255,0,0
chr6	target	racefrag	41411364	41411474	+	.	.	5RACE011_chr6_41411364_41411474
chr6	target	racefrag	41411803	41412144	+	.	.	5RACE011_chr6_41411364_41411474
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE011_chr6_41411364_41411474 Stomach" visibility=3 color=20,20,255
chr6	RTPCR_pool27	RTPCRfrag	41411391	41411498	.	.	.	5RACE011_chr6_41411364_41411474
chr6	RTPCR_pool27	RTPCRfrag	41411535	41411643	.	.	.	5RACE011_chr6_41411364_41411474
chr6	RTPCR_pool27	RTPCRfrag	41411818	41411875	.	.	.	5RACE011_chr6_41411364_41411474
chr6	RTPCR_pool27	RTPCRfrag	41411941	41412114	.	.	.	5RACE011_chr6_41411364_41411474
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE011_chr6_41411364_41411474 Stomach" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE011_chr6_41411364_41411474 Stomach" visibility=3 color=20,20,255
track name="RACEfragsBrain" description="RACEfrags RP1-149M18.2-5RACE011 Brain" 
track name="RACEfragsPlacenta" description="RACEfrags RP1-149M18.2-5RACE011 Placenta" 
track name="RACEfragsColon" description="RACEfrags RP1-149M18.2-5RACE011 Colon" 
track name="RACEfragsSmall_Intest" description="RACEfrags RP1-149M18.2-5RACE011 Small_Intest" 
chr6	5pr_Known_Small_Intest-1_signal.bed_COR.bed	fragmented_racefrag	41411364	41411498	.	+	.	racefrag_1
chr6	5pr_Known_Small_Intest-1_signal.bed_COR.bed	fragmented_racefrag	41411535	41411558	.	+	.	racefrag_2
chr6	5pr_Known_Small_Intest-1_signal.bed_COR.bed	fragmented_racefrag	41411818	41411875	.	+	.	racefrag_3
chr6	5pr_Known_Small_Intest-1_signal.bed_COR.bed	fragmented_racefrag	41411941	41412034	.	+	.	racefrag_4
chr6	5pr_Known_Small_Intest-1_signal.bed_COR.bed	fragmented_racefrag	41412073	41412114	.	+	.	racefrag_5
track name="RACEfragsHeart" description="RACEfrags RP1-149M18.2-5RACE011 Heart" 
track name="RACEfragsSpleen" description="RACEfrags RP1-149M18.2-5RACE011 Spleen" 
track name="RACEfragsKidney" description="RACEfrags RP1-149M18.2-5RACE011 Kidney" 
chr6	5pr_Known_Kidney-1_signal.bed_COR.bed	fragmented_racefrag	41411968	41412011	.	+	.	racefrag_1
chr6	5pr_Known_Kidney-1_signal.bed_COR.bed	fragmented_racefrag	41412073	41412114	.	+	.	racefrag_2
track name="RACEfragsStomach" description="RACEfrags RP1-149M18.2-5RACE011 Stomach" 
chr6	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	41411364	41411474	.	+	.	racefrag_1
chr6	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	41411535	41411558	.	+	.	racefrag_2
chr6	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	41411990	41412011	.	+	.	racefrag_3
chr6	5pr_Known_Stomach-1_signal.bed_COR.bed	fragmented_racefrag	41412073	41412114	.	+	.	racefrag_4
track name="RACEfragsLung" description="RACEfrags RP1-149M18.2-5RACE011 Lung" 
track name="RACEfragsTesti" description="RACEfrags RP1-149M18.2-5RACE011 Testi" 
track name="RACEfragsMuscle" description="RACEfrags RP1-149M18.2-5RACE011 Muscle" 
track name="RACEfragsLiver" description="RACEfrags RP1-149M18.2-5RACE011 Liver" 
track name="RACEfragsGM06990" description="RACEfrags RP1-149M18.2-5RACE011 GM06990" 
chr6	GeCo_5prRACE_Alex_GM06990_pool_1_signal.bed.mod	fragmented_racefrag	41411990	41412011	.	+	.	racefrag_1
chr6	GeCo_5prRACE_Alex_GM06990_pool_1_signal.bed.mod	fragmented_racefrag	41412073	41412114	.	+	.	racefrag_2
chr6	GeCo_5prRACE_Alex_GM06990_pool_1_signal.bed.mod	fragmented_racefrag	41417763	41417791	.	+	.	racefrag_3
track name="RACEfragsHL60" description="RACEfrags RP1-149M18.2-5RACE011 HL60" 
track name="RACEfragsHeLa" description="RACEfrags RP1-149M18.2-5RACE011 HeLa" 
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE011_chr6_41411364_41411474 Stomach" visibility=0 color=160,30,200
chr6	exonerate:est2genome	exon	41411371	41411644	.	+	.	5RACE011_chr6_41411364_41411474-08252A03
chr6	exonerate:est2genome	exon	41411803	41412134	.	+	.	5RACE011_chr6_41411364_41411474-08252A03
chr6	exonerate:est2genome	exon	41411371	41411644	.	+	.	5RACE011_chr6_41411364_41411474-08252B03
chr6	exonerate:est2genome	exon	41411803	41412134	.	+	.	5RACE011_chr6_41411364_41411474-08252B03
chr6	exonerate:est2genome	exon	41411371	41411644	.	+	.	5RACE011_chr6_41411364_41411474-08252C03
chr6	exonerate:est2genome	exon	41411803	41412134	.	+	.	5RACE011_chr6_41411364_41411474-08252C03
chr6	exonerate:est2genome	exon	41411371	41411644	.	+	.	5RACE011_chr6_41411364_41411474-08252D03
chr6	exonerate:est2genome	exon	41411803	41412115	.	+	.	5RACE011_chr6_41411364_41411474-08252D03
chr6	exonerate:est2genome	exon	41411466	41411644	.	+	.	5RACE011_chr6_41411364_41411474-08252E03
chr6	exonerate:est2genome	exon	41411803	41412134	.	+	.	5RACE011_chr6_41411364_41411474-08252E03
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE011_chr6_41411364_41411474" visibility=3 color=160,30,100
chr6	exonerate:est2genome	exon	41411371	41411644	.	+	.	5RACE011_chr6_41411364_41411474-08252A03
chr6	exonerate:est2genome	exon	41411803	41412134	.	+	.	5RACE011_chr6_41411364_41411474-08252A03
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE011_chr6_41411364_41411474" visibility=3 color=240,40,200
chr6	Known	exon	41411371	41411644	.	+	.	RP1-149M18.2-001
chr6	Known	CDS	41411593	41411644	.	+	0	RP1-149M18.2-001
chr6	Known	start_codon	41411593	41411595	.	+	0	RP1-149M18.2-001
chr6	Known	exon	41411803	41412144	.	+	.	RP1-149M18.2-001
chr6	Known	CDS	41411803	41412144	.	+	2	RP1-149M18.2-001
chr6	Known	exon	41417510	41417645	.	+	.	RP1-149M18.2-001
chr6	Known	CDS	41417510	41417645	.	+	2	RP1-149M18.2-001
chr6	Known	exon	41417752	41417865	.	+	.	RP1-149M18.2-001
chr6	Known	CDS	41417752	41417865	.	+	1	RP1-149M18.2-001
chr6	Known	exon	41418634	41418740	.	+	.	RP1-149M18.2-001
chr6	Known	CDS	41418634	41418740	.	+	1	RP1-149M18.2-001
chr6	Known	exon	41426394	41426574	.	+	.	RP1-149M18.2-001
chr6	Known	CDS	41426394	41426416	.	+	2	RP1-149M18.2-001
chr6	Known	stop_codon	41426417	41426419	.	+	0	RP1-149M18.2-001
