browser position  chr9:128922932-128926601
browser pack Gencode Genes
track name="targets" description="RTPCR target 5RACE006_chr9_128922932_128922935 Testi" visibility=3 color=255,0,0
chr9	target	racefrag	128922932	128922935	+	.	.	5RACE006_chr9_128922932_128922935
chr9	target	racefrag	128926501	128926601	+	.	.	5RACE006_chr9_128922932_128922935
track name="RTPCRfrags" description="RTPCRfrags Affy 5RACE006_chr9_128922932_128922935 Testi" visibility=3 color=20,20,255
chr9	RTPCR_pool29	RTPCRfrag	128922953	128923021	.	.	.	5RACE006_chr9_128922932_128922935
chr9	RTPCR_pool29	RTPCRfrag	128924394	128924502	.	.	.	5RACE006_chr9_128922932_128922935
chr9	RTPCR_pool29	RTPCRfrag	128926521	128926564	.	.	.	5RACE006_chr9_128922932_128922935
track name="RTPCRfrags_d" description="RTPCRfrags Affy oligodT 5RACE006_chr9_128922932_128922935 Testi" visibility=3 color=20,20,255
track name="RTPCRfrags_Geneva" description="RTPCRfrags Geneva  5RACE006_chr9_128922932_128922935 Testi" visibility=3 color=20,20,255
track name="RACEfragsBrain" description="RACEfrags RP11-167N5.4-5RACE006 Brain" 
track name="RACEfragsPlacenta" description="RACEfrags RP11-167N5.4-5RACE006 Placenta" 
chr9	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	128922953	128923021	.	+	.	racefrag_1
chr9	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	128923352	128923413	.	+	.	racefrag_2
chr9	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	128923966	128924030	.	+	.	racefrag_3
chr9	5pr_Known_Placenta-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926585	.	+	.	racefrag_4
track name="RACEfragsColon" description="RACEfrags RP11-167N5.4-5RACE006 Colon" 
chr9	5pr_Known_Colon-4_signal.bed_COR.bed	fragmented_racefrag	128922953	128922974	.	+	.	racefrag_1
chr9	5pr_Known_Colon-4_signal.bed_COR.bed	fragmented_racefrag	128924394	128924476	.	+	.	racefrag_2
chr9	5pr_Known_Colon-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926543	.	+	.	racefrag_3
track name="RACEfragsSmall_Intest" description="RACEfrags RP11-167N5.4-5RACE006 Small_Intest" 
chr9	5pr_Known_Small_Intest-4_signal.bed_COR.bed	fragmented_racefrag	128922932	128922935	.	+	.	racefrag_1
chr9	5pr_Known_Small_Intest-4_signal.bed_COR.bed	fragmented_racefrag	128922936	128922974	.	+	.	racefrag_2
chr9	5pr_Known_Small_Intest-4_signal.bed_COR.bed	fragmented_racefrag	128924394	128924476	.	+	.	racefrag_3
chr9	5pr_Known_Small_Intest-4_signal.bed_COR.bed	fragmented_racefrag	128926302	128926452	.	+	.	racefrag_4
track name="RACEfragsHeart" description="RACEfrags RP11-167N5.4-5RACE006 Heart" 
chr9	5pr_Known_Heart-4_signal.bed_COR.bed	fragmented_racefrag	128922822	128922887	.	+	.	racefrag_1
chr9	5pr_Known_Heart-4_signal.bed_COR.bed	fragmented_racefrag	128922932	128922935	.	+	.	racefrag_2
chr9	5pr_Known_Heart-4_signal.bed_COR.bed	fragmented_racefrag	128922936	128922974	.	+	.	racefrag_3
chr9	5pr_Known_Heart-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926543	.	+	.	racefrag_4
track name="RACEfragsSpleen" description="RACEfrags RP11-167N5.4-5RACE006 Spleen" 
chr9	5pr_Known_Spleen-4_signal.bed_COR.bed	fragmented_racefrag	128922953	128923021	.	+	.	racefrag_1
chr9	5pr_Known_Spleen-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926585	.	+	.	racefrag_2
track name="RACEfragsKidney" description="RACEfrags RP11-167N5.4-5RACE006 Kidney" 
chr9	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	128922953	128922974	.	+	.	racefrag_1
chr9	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	128924394	128924476	.	+	.	racefrag_2
chr9	5pr_Known_Kidney-4_signal.bed_COR.bed	fragmented_racefrag	128926452	128926500	.	+	.	racefrag_3
track name="RACEfragsStomach" description="RACEfrags RP11-167N5.4-5RACE006 Stomach" 
chr9	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	128870447	128870469	.	+	.	racefrag_1
chr9	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	128922844	128922866	.	+	.	racefrag_2
chr9	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	128922932	128922935	.	+	.	racefrag_3
chr9	5pr_Known_Stomach-4_signal.bed_COR.bed	fragmented_racefrag	128922936	128922974	.	+	.	racefrag_4
track name="RACEfragsLung" description="RACEfrags RP11-167N5.4-5RACE006 Lung" 
chr9	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	128922932	128922935	.	+	.	racefrag_1
chr9	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	128922936	128923021	.	+	.	racefrag_2
chr9	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	128924394	128924476	.	+	.	racefrag_3
chr9	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	128926452	128926479	.	+	.	racefrag_4
chr9	5pr_Known_Lung-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926585	.	+	.	racefrag_5
track name="RACEfragsTesti" description="RACEfrags RP11-167N5.4-5RACE006 Testi" 
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128828420	128828511	.	+	.	racefrag_1
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128828632	128828641	.	+	.	racefrag_2
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128828642	128828694	.	+	.	racefrag_3
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128828734	128828775	.	+	.	racefrag_4
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128828818	128828867	.	+	.	racefrag_5
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128922932	128922935	.	+	.	racefrag_6
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128922936	128923021	.	+	.	racefrag_7
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128923323	128923413	.	+	.	racefrag_8
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128923600	128923676	.	+	.	racefrag_9
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128923923	128924109	.	+	.	racefrag_10
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128924365	128924476	.	+	.	racefrag_11
chr9	5pr_Known_Testi-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926585	.	+	.	racefrag_12
track name="RACEfragsMuscle" description="RACEfrags RP11-167N5.4-5RACE006 Muscle" 
chr9	5pr_Known_Muscle-4_signal.bed_COR.bed	fragmented_racefrag	128922953	128922974	.	+	.	racefrag_1
chr9	5pr_Known_Muscle-4_signal.bed_COR.bed	fragmented_racefrag	128926521	128926543	.	+	.	racefrag_2
track name="RACEfragsLiver" description="RACEfrags RP11-167N5.4-5RACE006 Liver" 
chr9	5pr_Known_Liver-4_signal.bed_COR.bed	fragmented_racefrag	128922953	128922974	.	+	.	racefrag_1
track name="RACEfragsGM06990" description="RACEfrags RP11-167N5.4-5RACE006 GM06990" 
chr9	GeCo_5prRACE_Alex_GM06990_pool_4_signal.bed.mod	fragmented_racefrag	128922932	128922935	.	+	.	racefrag_1
chr9	GeCo_5prRACE_Alex_GM06990_pool_4_signal.bed.mod	fragmented_racefrag	128922936	128923021	.	+	.	racefrag_2
chr9	GeCo_5prRACE_Alex_GM06990_pool_4_signal.bed.mod	fragmented_racefrag	128924394	128924414	.	+	.	racefrag_3
chr9	GeCo_5prRACE_Alex_GM06990_pool_4_signal.bed.mod	fragmented_racefrag	128926521	128926585	.	+	.	racefrag_4
track name="RACEfragsHL60" description="RACEfrags RP11-167N5.4-5RACE006 HL60" 
chr9	GeCo_5prRACE_Alex_HL60_pool_4_signal.bed.mod	fragmented_racefrag	128922953	128923021	.	+	.	racefrag_1
chr9	GeCo_5prRACE_Alex_HL60_pool_4_signal.bed.mod	fragmented_racefrag	128926521	128926585	.	+	.	racefrag_2
track name="RACEfragsHeLa" description="RACEfrags RP11-167N5.4-5RACE006 HeLa" 
chr9	5pr_Known_HeLa-4_signal.bed.mod	fragmented_racefrag	128922920	128922935	.	+	.	racefrag_1
chr9	5pr_Known_HeLa-4_signal.bed.mod	fragmented_racefrag	128922936	128923008	.	+	.	racefrag_2
chr9	5pr_Known_HeLa-4_signal.bed.mod	fragmented_racefrag	128926509	128926551	.	+	.	racefrag_3
track name="sequences" description="RTPCR sequence(s) mapped by exonerate before filtering 5RACE006_chr9_128922932_128922935 Testi" visibility=0 color=160,30,200
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254A10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254A10
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254B10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254B10
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254C10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254C10
chr9	exonerate:est2genome	exon	128922933	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254D10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254D10
chr9	exonerate:est2genome	exon	128922933	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254E10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254E10
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254F10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254F10
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254G10
chr9	exonerate:est2genome	exon	128926501	128926570	.	+	.	5RACE006_chr9_128922932_128922935-08254G10
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254H10
chr9	exonerate:est2genome	exon	128926501	128926570	.	+	.	5RACE006_chr9_128922932_128922935-08254H10
track name="sequences_Kept" description="RTPCR sequence(s) mapped by exonerate, used for Gencode analysis for RT-PCR 5RACE006_chr9_128922932_128922935" visibility=3 color=160,30,100
chr9	exonerate:est2genome	exon	128922933	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254D10
chr9	exonerate:est2genome	exon	128926501	128926562	.	+	.	5RACE006_chr9_128922932_128922935-08254D10
chr9	exonerate:est2genome	exon	128922938	128923040	.	+	.	5RACE006_chr9_128922932_128922935-08254G10
chr9	exonerate:est2genome	exon	128926501	128926570	.	+	.	5RACE006_chr9_128922932_128922935-08254G10
track name="sequences_Gencode" description="Gencode (re)annotated transcript(s) supported by the sequences for RT-PCR 5RACE006_chr9_128922932_128922935" visibility=3 color=240,40,200
chr9	Known	exon	128922933	128923040	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128922965	128923040	.	+	0	RP11-167N5.4-001
chr9	Known	start_codon	128922965	128922967	.	+	0	RP11-167N5.4-001
chr9	Known	exon	128926501	128926601	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128926501	128926601	.	+	2	RP11-167N5.4-001
chr9	Known	exon	128926856	128926940	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128926856	128926940	.	+	0	RP11-167N5.4-001
chr9	Known	exon	128927040	128927139	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128927040	128927139	.	+	2	RP11-167N5.4-001
chr9	Known	exon	128927351	128927449	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128927351	128927449	.	+	1	RP11-167N5.4-001
chr9	Known	exon	128927972	128928100	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128927972	128928100	.	+	1	RP11-167N5.4-001
chr9	Known	exon	128928542	128928631	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128928542	128928631	.	+	1	RP11-167N5.4-001
chr9	Known	exon	128930804	128932268	.	+	.	RP11-167N5.4-001
chr9	Known	CDS	128930804	128930837	.	+	1	RP11-167N5.4-001
chr9	Known	stop_codon	128930838	128930840	.	+	0	RP11-167N5.4-001
