This directory contains a dump of the UCSC genome annotation database for the April 5, 2002 GenBank freeze assembled by NCBI. This is updated weekly on Sundays. The .txt.gz files are the database tables in a tab-delimited format compressed with gzip. The .sql files are the MySQL commands used to create the tables. See http://genome.ucsc.edu/goldenPath/gbdDescriptions.html for descriptions of the tables. All of the tables are freely usable for any purpose except for the following: softberryGene.txt and softberryPep.txt - Free for academic and nonprofit use. Commercial users please contact Softberry Inc at http://www.softberry.com. genieAlt.txt and genieAltPep.txt - Free for academic and nonprofit use. See Affymetrix user agreement at http://genome.ucsc.edu/goldenPath/licenses/affyagreement.html. Commercial users please contact Affymetrix Inc. at http://www.affymetrix.com.
Name Last modified Size Description
Parent Directory - acembly.sql 2002-06-17 07:04 731 acembly.txt.gz 2002-06-17 07:04 4.4M acemblyPep.sql 2002-06-17 07:04 319 acemblyPep.txt.gz 2002-06-17 07:04 8.6M all_bacends.sql 2002-05-22 13:36 1.2K all_bacends.txt.gz 2002-05-22 13:23 42M all_est.sql 2002-05-22 13:36 1.3K all_est.txt.gz 2002-05-22 13:27 283M all_mrna.sql 2002-05-22 13:36 1.3K all_mrna.txt.gz 2002-05-22 13:27 6.5M all_sts_primer.sql 2002-05-22 13:36 1.2K all_sts_primer.txt.gz 2002-05-22 13:27 3.7M all_sts_seq.sql 2002-05-22 13:36 1.2K all_sts_seq.txt.gz 2002-05-22 13:27 3.1M author.sql 2002-08-01 13:55 323 author.txt.gz 2002-08-01 13:55 1.6M bacEndPairs.sql 2002-05-22 13:36 767 bacEndPairs.txt.gz 2002-05-22 13:27 4.9M cds.sql 2002-08-01 13:55 317 cds.txt.gz 2002-08-01 13:55 542K cell.sql 2002-08-01 13:55 319 cell.txt.gz 2002-08-01 13:55 56K chr1_blatFish.sql 2002-05-22 13:36 1.3K chr1_blatFish.txt.gz 2002-05-22 13:29 1.0M chr1_est.sql 2002-05-22 13:36 1.3K chr1_est.txt.gz 2002-05-22 13:29 23M chr1_gap.sql 2002-05-22 13:36 693 chr1_gap.txt.gz 2002-05-22 13:29 24K chr1_gl.sql 2002-05-22 13:36 475 chr1_gl.txt.gz 2002-05-22 13:29 181K chr1_gold.sql 2002-05-22 13:36 770 chr1_gold.txt.gz 2002-05-22 13:29 92K chr1_intronEst.sql 2002-05-22 13:36 1.3K chr1_intronEst.txt.gz 2002-05-22 13:29 9.2M chr1_mrna.sql 2002-05-22 13:36 1.3K chr1_mrna.txt.gz 2002-05-22 13:29 514K chr1_random_blatFish.sql 2002-05-22 13:36 1.3K chr1_random_blatFish.txt.gz 2002-05-22 13:29 4.6K chr1_random_est.sql 2002-05-22 13:36 1.3K chr1_random_est.txt.gz 2002-05-22 13:29 51K chr1_random_gap.sql 2002-05-22 13:36 707 chr1_random_gap.txt.gz 2002-05-22 13:29 1.8K chr1_random_gl.sql 2002-05-22 13:36 489 chr1_random_gl.txt.gz 2002-05-22 13:29 2.1K chr1_random_gold.sql 2002-05-22 13:36 784 chr1_random_gold.txt.gz 2002-05-22 13:29 3.3K chr1_random_intronEst.sql 2002-05-22 13:36 1.3K chr1_random_intronEst.txt.gz 2002-05-22 13:29 3.5K chr1_random_mrna.sql 2002-05-22 13:36 1.3K chr1_random_mrna.txt.gz 2002-05-22 13:29 878 chr1_random_rmsk.sql 2003-03-14 08:57 1.1K chr1_random_rmsk.txt.gz 2003-03-14 08:57 76K chr1_rmsk.sql 2003-03-14 08:54 1.0K chr1_rmsk.txt.gz 2003-03-14 08:54 10M chr2_blatFish.sql 2002-05-22 13:36 1.3K chr2_blatFish.txt.gz 2002-05-22 13:29 773K chr2_est.sql 2002-05-22 13:36 1.3K chr2_est.txt.gz 2002-05-22 13:30 17M chr2_gap.sql 2002-05-22 13:36 693 chr2_gap.txt.gz 2002-05-22 13:30 15K chr2_gl.sql 2002-05-22 13:36 475 chr2_gl.txt.gz 2002-05-22 13:30 133K chr2_gold.sql 2002-05-22 13:36 770 chr2_gold.txt.gz 2002-05-22 13:30 64K chr2_intronEst.sql 2002-05-22 13:36 1.3K chr2_intronEst.txt.gz 2002-05-22 13:30 6.0M chr2_mrna.sql 2002-05-22 13:36 1.3K chr2_mrna.txt.gz 2002-05-22 13:30 413K chr2_random_blatFish.sql 2002-05-22 13:36 1.3K chr2_random_blatFish.txt.gz 2002-05-22 13:30 8.2K chr2_random_est.sql 2002-05-22 13:36 1.3K chr2_random_est.txt.gz 2002-05-22 13:30 961K chr2_random_gap.sql 2002-05-22 13:36 707 chr2_random_gap.txt.gz 2002-05-22 13:30 4.7K chr2_random_gl.sql 2002-05-22 13:36 489 chr2_random_gl.txt.gz 2002-05-22 13:30 4.9K chr2_random_gold.sql 2002-05-22 13:36 784 chr2_random_gold.txt.gz 2002-05-22 13:30 8.4K chr2_random_intronEst.sql 2002-05-22 13:36 1.3K chr2_random_intronEst.txt.gz 2002-05-22 13:30 11K chr2_random_mrna.sql 2002-05-22 13:36 1.3K chr2_random_mrna.txt.gz 2002-05-22 13:30 3.1K chr2_random_rmsk.sql 2003-03-14 08:56 1.1K chr2_random_rmsk.txt.gz 2003-03-14 08:56 137K chr2_rmsk.sql 2003-03-14 08:54 1.0K chr2_rmsk.txt.gz 2003-03-14 08:54 9.9M chr3_blatFish.sql 2002-05-22 13:36 1.3K chr3_blatFish.txt.gz 2002-05-22 13:30 592K chr3_est.sql 2002-05-22 13:36 1.3K chr3_est.txt.gz 2002-05-22 13:30 13M chr3_gap.sql 2002-05-22 13:36 693 chr3_gap.txt.gz 2002-05-22 13:30 54K chr3_gl.sql 2002-05-22 13:36 475 chr3_gl.txt.gz 2002-05-22 13:30 246K chr3_gold.sql 2002-05-22 13:36 770 chr3_gold.txt.gz 2002-05-22 13:30 157K chr3_intronEst.sql 2002-05-22 13:36 1.3K chr3_intronEst.txt.gz 2002-05-22 13:30 4.5M chr3_mrna.sql 2002-05-22 13:36 1.3K chr3_mrna.txt.gz 2002-05-22 13:30 293K chr3_random_blatFish.sql 2002-05-22 13:36 1.3K chr3_random_blatFish.txt.gz 2002-05-22 13:30 11K chr3_random_est.sql 2002-05-22 13:36 1.3K chr3_random_est.txt.gz 2002-05-22 13:30 236K chr3_random_gap.sql 2002-05-22 13:36 707 chr3_random_gap.txt.gz 2002-05-22 13:30 7.5K chr3_random_gl.sql 2002-05-22 13:36 489 chr3_random_gl.txt.gz 2002-05-22 13:30 7.6K chr3_random_gold.sql 2002-05-22 13:36 784 chr3_random_gold.txt.gz 2002-05-22 13:30 13K chr3_random_intronEst.sql 2002-05-22 13:36 1.3K chr3_random_intronEst.txt.gz 2002-05-22 13:30 29K chr3_random_mrna.sql 2002-05-22 13:36 1.3K chr3_random_mrna.txt.gz 2002-05-22 13:30 2.8K chr3_random_rmsk.sql 2003-03-14 08:57 1.1K chr3_random_rmsk.txt.gz 2003-03-14 08:57 220K chr3_rmsk.sql 2003-03-14 08:54 1.0K chr3_rmsk.txt.gz 2003-03-14 08:55 8.0M chr4_blatFish.sql 2002-05-22 13:36 1.3K chr4_blatFish.txt.gz 2002-05-22 13:30 381K chr4_est.sql 2002-05-22 13:36 1.3K chr4_est.txt.gz 2002-05-22 13:30 9.3M chr4_gap.sql 2002-05-22 13:36 693 chr4_gap.txt.gz 2002-05-22 13:30 20K chr4_gl.sql 2002-05-22 13:36 475 chr4_gl.txt.gz 2002-05-22 13:30 148K chr4_gold.sql 2002-05-22 13:36 770 chr4_gold.txt.gz 2002-05-22 13:30 73K chr4_intronEst.sql 2002-05-22 13:36 1.3K chr4_intronEst.txt.gz 2002-05-22 13:30 3.1M chr4_mrna.sql 2002-05-22 13:36 1.3K chr4_mrna.txt.gz 2002-05-22 13:30 197K chr4_random_blatFish.sql 2002-05-22 13:36 1.3K chr4_random_blatFish.txt.gz 2002-05-22 13:30 19K chr4_random_est.sql 2002-05-22 13:36 1.3K chr4_random_est.txt.gz 2002-05-22 13:30 162K chr4_random_gap.sql 2002-05-22 13:36 707 chr4_random_gap.txt.gz 2002-05-22 13:30 5.3K chr4_random_gl.sql 2002-05-22 13:36 489 chr4_random_gl.txt.gz 2002-05-22 13:30 5.7K chr4_random_gold.sql 2002-05-22 13:36 784 chr4_random_gold.txt.gz 2002-05-22 13:30 9.5K chr4_random_intronEst.sql 2002-05-22 13:36 1.3K chr4_random_intronEst.txt.gz 2002-05-22 13:30 9.3K chr4_random_mrna.sql 2002-05-22 13:36 1.3K chr4_random_mrna.txt.gz 2002-05-22 13:30 2.0K chr4_random_rmsk.sql 2003-03-14 08:57 1.1K chr4_random_rmsk.txt.gz 2003-03-14 08:57 157K chr4_rmsk.sql 2003-03-14 08:55 1.0K chr4_rmsk.txt.gz 2003-03-14 08:55 7.7M chr5_blatFish.sql 2002-05-22 13:36 1.3K chr5_blatFish.txt.gz 2002-05-22 13:30 574K chr5_est.sql 2002-05-22 13:36 1.3K chr5_est.txt.gz 2002-05-22 13:30 13M chr5_gap.sql 2002-05-22 13:36 693 chr5_gap.txt.gz 2002-05-22 13:30 29K chr5_gl.sql 2002-05-22 13:36 475 chr5_gl.txt.gz 2002-05-22 13:30 192K chr5_gold.sql 2002-05-22 13:36 770 chr5_gold.txt.gz 2002-05-22 13:30 98K chr5_intronEst.sql 2002-05-22 13:36 1.3K chr5_intronEst.txt.gz 2002-05-22 13:30 4.1M chr5_mrna.sql 2002-05-22 13:36 1.3K chr5_mrna.txt.gz 2002-05-22 13:30 256K chr5_random_blatFish.sql 2002-05-22 13:36 1.3K chr5_random_blatFish.txt.gz 2002-05-22 13:30 3.8K chr5_random_est.sql 2002-05-22 13:36 1.3K chr5_random_est.txt.gz 2002-05-22 13:30 99K chr5_random_gap.sql 2002-05-22 13:36 707 chr5_random_gap.txt.gz 2002-05-22 13:30 1.6K chr5_random_gl.sql 2002-05-22 13:36 489 chr5_random_gl.txt.gz 2002-05-22 13:30 1.8K chr5_random_gold.sql 2002-05-22 13:36 784 chr5_random_gold.txt.gz 2002-05-22 13:30 2.8K chr5_random_intronEst.sql 2002-05-22 13:36 1.3K chr5_random_intronEst.txt.gz 2002-05-22 13:30 28K chr5_random_mrna.sql 2002-05-22 13:36 1.3K chr5_random_mrna.txt.gz 2002-05-22 13:30 1.7K chr5_random_rmsk.sql 2003-03-14 08:57 1.1K chr5_random_rmsk.txt.gz 2003-03-14 08:57 117K chr5_rmsk.sql 2003-03-14 08:55 1.0K chr5_rmsk.txt.gz 2003-03-14 08:55 7.5M chr6_blatFish.sql 2002-05-22 13:36 1.3K chr6_blatFish.txt.gz 2002-05-22 13:31 495K chr6_est.sql 2002-05-22 13:36 1.3K chr6_est.txt.gz 2002-05-22 13:31 14M chr6_gap.sql 2002-05-22 13:36 693 chr6_gap.txt.gz 2002-05-22 13:31 12K chr6_gl.sql 2002-05-22 13:36 475 chr6_gl.txt.gz 2002-05-22 13:31 96K chr6_gold.sql 2002-05-22 13:36 770 chr6_gold.txt.gz 2002-05-22 13:31 58K chr6_intronEst.sql 2002-05-22 13:36 1.3K chr6_intronEst.txt.gz 2002-05-22 13:31 6.2M chr6_mrna.sql 2002-05-22 13:36 1.3K chr6_mrna.txt.gz 2002-05-22 13:31 287K chr6_random_blatFish.sql 2002-05-22 13:36 1.3K chr6_random_blatFish.txt.gz 2002-05-22 13:31 13K chr6_random_est.sql 2002-05-22 13:36 1.3K chr6_random_est.txt.gz 2002-05-22 13:31 1.7M chr6_random_gap.sql 2002-05-22 13:36 707 chr6_random_gap.txt.gz 2002-05-22 13:31 2.3K chr6_random_gl.sql 2002-05-22 13:36 489 chr6_random_gl.txt.gz 2002-05-22 13:31 3.3K chr6_random_gold.sql 2002-05-22 13:36 784 chr6_random_gold.txt.gz 2002-05-22 13:31 4.4K chr6_random_intronEst.sql 2002-05-22 13:36 1.3K chr6_random_intronEst.txt.gz 2002-05-22 13:31 609K chr6_random_mrna.sql 2002-05-22 13:36 1.3K chr6_random_mrna.txt.gz 2002-05-22 13:31 32K chr6_random_rmsk.sql 2003-03-14 08:57 1.1K chr6_random_rmsk.txt.gz 2003-03-14 08:57 182K chr6_rmsk.sql 2003-03-14 08:55 1.0K chr6_rmsk.txt.gz 2003-03-14 08:56 7.2M chr7_blatFish.sql 2002-05-22 13:36 1.3K chr7_blatFish.txt.gz 2002-05-22 13:31 555K chr7_est.sql 2002-05-22 13:36 1.3K chr7_est.txt.gz 2002-05-22 13:31 14M chr7_gap.sql 2002-05-22 13:36 693 chr7_gap.txt.gz 2002-05-22 13:31 3.1K chr7_gl.sql 2002-05-22 13:36 475 chr7_gl.txt.gz 2002-05-22 13:31 66K chr7_gold.sql 2002-05-22 13:36 770 chr7_gold.txt.gz 2002-05-22 13:31 35K chr7_intronEst.sql 2002-05-22 13:36 1.3K chr7_intronEst.txt.gz 2002-05-22 13:31 4.7M chr7_mrna.sql 2002-05-22 13:36 1.3K chr7_mrna.txt.gz 2002-05-22 13:31 339K chr7_random_blatFish.sql 2002-05-22 13:36 1.3K chr7_random_blatFish.txt.gz 2002-05-22 13:31 7.1K chr7_random_est.sql 2002-05-22 13:36 1.3K chr7_random_est.txt.gz 2002-05-22 13:31 248K chr7_random_gap.sql 2002-05-22 13:36 707 chr7_random_gap.txt.gz 2002-05-22 13:31 1.2K chr7_random_gl.sql 2002-05-22 13:36 489 chr7_random_gl.txt.gz 2002-05-22 13:31 1.9K chr7_random_gold.sql 2002-05-22 13:36 784 chr7_random_gold.txt.gz 2002-05-22 13:31 2.6K chr7_random_intronEst.sql 2002-05-22 13:36 1.3K chr7_random_intronEst.txt.gz 2002-05-22 13:31 36K chr7_random_mrna.sql 2002-05-22 13:36 1.3K chr7_random_mrna.txt.gz 2002-05-22 13:31 1.5K chr7_random_rmsk.sql 2003-03-14 08:57 1.1K chr7_random_rmsk.txt.gz 2003-03-14 08:57 107K chr7_rmsk.sql 2003-03-14 08:56 1.0K chr7_rmsk.txt.gz 2003-03-14 08:56 6.7M chr8_blatFish.sql 2002-05-22 13:36 1.3K chr8_blatFish.txt.gz 2002-05-22 13:31 372K chr8_est.sql 2002-05-22 13:36 1.3K chr8_est.txt.gz 2002-05-22 13:31 8.3M chr8_gap.sql 2002-05-22 13:36 693 chr8_gap.txt.gz 2002-05-22 13:31 21K chr8_gl.sql 2002-05-22 13:36 475 chr8_gl.txt.gz 2002-05-22 13:31 120K chr8_gold.sql 2002-05-22 13:36 770 chr8_gold.txt.gz 2002-05-22 13:31 67K chr8_intronEst.sql 2002-05-22 13:36 1.3K chr8_intronEst.txt.gz 2002-05-22 13:31 3.0M chr8_mrna.sql 2002-05-22 13:36 1.3K chr8_mrna.txt.gz 2002-05-22 13:31 173K chr8_random_blatFish.sql 2002-05-22 13:36 1.3K chr8_random_blatFish.txt.gz 2002-05-22 13:31 4.6K chr8_random_est.sql 2002-05-22 13:36 1.3K chr8_random_est.txt.gz 2002-05-22 13:31 291K chr8_random_gap.sql 2002-05-22 13:36 707 chr8_random_gap.txt.gz 2002-05-22 13:31 3.3K chr8_random_gl.sql 2002-05-22 13:36 489 chr8_random_gl.txt.gz 2002-05-22 13:31 3.3K chr8_random_gold.sql 2002-05-22 13:36 784 chr8_random_gold.txt.gz 2002-05-22 13:31 6.0K chr8_random_intronEst.sql 2002-05-22 13:36 1.3K chr8_random_intronEst.txt.gz 2002-05-22 13:31 10K chr8_random_mrna.sql 2002-05-22 13:36 1.3K chr8_random_mrna.txt.gz 2002-05-22 13:31 2.0K chr8_random_rmsk.sql 2003-03-14 08:57 1.1K chr8_random_rmsk.txt.gz 2003-03-14 08:57 140K chr8_rmsk.sql 2003-03-14 08:56 1.0K chr8_rmsk.txt.gz 2003-03-14 08:56 5.9M chr9_blatFish.sql 2002-05-22 13:36 1.3K chr9_blatFish.txt.gz 2002-05-22 13:31 385K chr9_est.sql 2002-05-22 13:36 1.3K chr9_est.txt.gz 2002-05-22 13:31 10M chr9_gap.sql 2002-05-22 13:36 693 chr9_gap.txt.gz 2002-05-22 13:31 3.3K chr9_gl.sql 2002-05-22 13:36 475 chr9_gl.txt.gz 2002-05-22 13:31 51K chr9_gold.sql 2002-05-22 13:36 770 chr9_gold.txt.gz 2002-05-22 13:31 24K chr9_intronEst.sql 2002-05-22 13:36 1.3K chr9_intronEst.txt.gz 2002-05-22 13:31 3.3M chr9_mrna.sql 2002-05-22 13:36 1.3K chr9_mrna.txt.gz 2002-05-22 13:31 198K chr9_random_blatFish.sql 2002-05-22 13:36 1.3K chr9_random_blatFish.txt.gz 2002-05-22 13:31 2.5K chr9_random_est.sql 2002-05-22 13:36 1.3K chr9_random_est.txt.gz 2002-05-22 13:31 53K chr9_random_gap.sql 2002-05-22 13:36 707 chr9_random_gap.txt.gz 2002-05-22 13:31 749 chr9_random_gl.sql 2002-05-22 13:36 489 chr9_random_gl.txt.gz 2002-05-22 13:31 698 chr9_random_gold.sql 2002-05-22 13:36 784 chr9_random_gold.txt.gz 2002-05-22 13:31 1.3K chr9_random_intronEst.sql 2002-05-22 13:36 1.3K chr9_random_intronEst.txt.gz 2002-05-22 13:31 10K chr9_random_mrna.sql 2002-05-22 13:36 1.3K chr9_random_mrna.txt.gz 2002-05-22 13:31 507 chr9_random_rmsk.sql 2003-03-14 08:57 1.1K chr9_random_rmsk.txt.gz 2003-03-14 08:57 23K chr9_rmsk.sql 2003-03-14 08:57 1.0K chr9_rmsk.txt.gz 2003-03-14 08:57 5.0M chr10_blatFish.sql 2002-05-22 13:36 1.3K chr10_blatFish.txt.gz 2002-05-22 13:27 439K chr10_est.sql 2002-05-22 13:36 1.3K chr10_est.txt.gz 2002-05-22 13:27 9.2M chr10_gap.sql 2002-05-22 13:36 695 chr10_gap.txt.gz 2002-05-22 13:27 10K chr10_gl.sql 2002-05-22 13:36 477 chr10_gl.txt.gz 2002-05-22 13:27 76K chr10_gold.sql 2002-05-22 13:36 772 chr10_gold.txt.gz 2002-05-22 13:27 42K chr10_intronEst.sql 2002-05-22 13:36 1.3K chr10_intronEst.txt.gz 2002-05-22 13:27 3.2M chr10_mrna.sql 2002-05-22 13:36 1.3K chr10_mrna.txt.gz 2002-05-22 13:27 213K chr10_random_blatFish.sql 2002-05-22 13:36 1.3K chr10_random_blatFish.txt.gz 2002-05-22 13:27 1.7K chr10_random_est.sql 2002-05-22 13:36 1.3K chr10_random_est.txt.gz 2002-05-22 13:27 93K chr10_random_gap.sql 2002-05-22 13:36 709 chr10_random_gap.txt.gz 2002-05-22 13:27 880 chr10_random_gl.sql 2002-05-22 13:36 491 chr10_random_gl.txt.gz 2002-05-22 13:27 1.2K chr10_random_gold.sql 2002-05-22 13:36 786 chr10_random_gold.txt.gz 2002-05-22 13:27 1.8K chr10_random_intronEst.sql 2002-05-22 13:36 1.3K chr10_random_intronEst.txt.gz 2002-05-22 13:27 28K chr10_random_mrna.sql 2002-05-22 13:36 1.3K chr10_random_mrna.txt.gz 2002-05-22 13:27 1.3K chr10_random_rmsk.sql 2003-03-14 08:57 1.1K chr10_random_rmsk.txt.gz 2003-03-14 08:57 42K chr10_rmsk.sql 2003-03-14 08:57 1.0K chr10_rmsk.txt.gz 2003-03-14 08:57 5.7M chr11_blatFish.sql 2002-05-22 13:36 1.3K chr11_blatFish.txt.gz 2002-05-22 13:27 447K chr11_est.sql 2002-05-22 13:36 1.3K chr11_est.txt.gz 2002-05-22 13:27 13M chr11_gap.sql 2002-05-22 13:36 695 chr11_gap.txt.gz 2002-05-22 13:27 19K chr11_gl.sql 2002-05-22 13:36 477 chr11_gl.txt.gz 2002-05-22 13:27 162K chr11_gold.sql 2002-05-22 13:36 772 chr11_gold.txt.gz 2002-05-22 13:27 65K chr11_intronEst.sql 2002-05-22 13:36 1.3K chr11_intronEst.txt.gz 2002-05-22 13:27 5.7M chr11_mrna.sql 2002-05-22 13:36 1.3K chr11_mrna.txt.gz 2002-05-22 13:27 254K chr11_random_blatFish.sql 2002-05-22 13:36 1.3K chr11_random_blatFish.txt.gz 2002-05-22 13:27 15K chr11_random_est.sql 2002-05-22 13:36 1.3K chr11_random_est.txt.gz 2002-05-22 13:27 285K chr11_random_gap.sql 2002-05-22 13:36 709 chr11_random_gap.txt.gz 2002-05-22 13:27 4.6K chr11_random_gl.sql 2002-05-22 13:36 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