This directory contains reciprocal-best netted chains for galGal6-tetNig2.
- galGal6.tetNig2.rbest.net.gz: galGal6-referenced recip.best net to tetNig2.
- galGal6.tetNig2.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from galGal6 to tetNig2 through the recip.best net.
- tetNig2.galGal6.rbest.net.gz: tetNig2-referenced recip.best net.
- tetNig2.galGal6.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/galGal6.tetNig2.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
tetNig2.galGal6.rbest.net.gz 2018-10-21 12:58 5.5M
tetNig2.galGal6.rbest.chain.gz 2018-10-21 12:58 3.2M
galGal6.tetNig2.rbest.chain.gz 2018-10-21 12:58 3.2M
galGal6.tetNig2.rbest.net.gz 2018-10-21 12:58 5.6M
md5sum.txt 2018-10-21 12:58 256
axtRBestNet/ 2018-10-21 14:07 -