This directory contains reciprocal-best netted chains for galGal6-pteGut1. - galGal6.pteGut1.rbest.net.gz: galGal6-referenced recip.best net to pteGut1. - galGal6.pteGut1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to pteGut1 through the recip.best net. - pteGut1.galGal6.rbest.net.gz: pteGut1-referenced recip.best net. - pteGut1.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.pteGut1.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-21 13:38 - galGal6.pteGut1.rbest.chain.gz 2018-10-21 07:59 41M galGal6.pteGut1.rbest.net.gz 2018-10-21 08:00 60M md5sum.txt 2018-10-21 08:00 256 pteGut1.galGal6.rbest.chain.gz 2018-10-21 07:59 41M pteGut1.galGal6.rbest.net.gz 2018-10-21 07:58 77M