This directory contains reciprocal-best netted chains for galGal6-hg38. - galGal6.hg38.rbest.net.gz: galGal6-referenced recip.best net to hg38. - galGal6.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to hg38 through the recip.best net. - hg38.galGal6.rbest.net.gz: hg38-referenced recip.best net. - hg38.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-11-09 15:47 - galGal6.hg38.rbest.chain.gz 2018-10-12 13:31 8.4M galGal6.hg38.rbest.net.gz 2018-10-12 13:31 15M hg38.galGal6.rbest.chain.gz 2018-10-12 13:31 8.4M hg38.galGal6.rbest.net.gz 2018-10-12 13:31 15M md5sum.txt 2018-10-12 13:31 244