This directory contains reciprocal-best netted chains for galGal6-fr3. - galGal6.fr3.rbest.net.gz: galGal6-referenced recip.best net to fr3. - galGal6.fr3.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to fr3 through the recip.best net. - fr3.galGal6.rbest.net.gz: fr3-referenced recip.best net. - fr3.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.fr3.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-17 11:22 - fr3.galGal6.rbest.chain.gz 2018-10-17 10:27 3.1M fr3.galGal6.rbest.net.gz 2018-10-17 10:27 5.3M galGal6.fr3.rbest.chain.gz 2018-10-17 10:27 3.1M galGal6.fr3.rbest.net.gz 2018-10-17 10:27 5.2M md5sum.txt 2018-10-17 10:27 240