This directory contains reciprocal-best netted chains for galGal6-carCri1. - galGal6.carCri1.rbest.net.gz: galGal6-referenced recip.best net to carCri1. - galGal6.carCri1.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from galGal6 to carCri1 through the recip.best net. - carCri1.galGal6.rbest.net.gz: carCri1-referenced recip.best net. - carCri1.galGal6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/galGal6.carCri1.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-18 14:26 - carCri1.galGal6.rbest.chain.gz 2018-10-18 08:51 41M carCri1.galGal6.rbest.net.gz 2018-10-18 08:50 79M galGal6.carCri1.rbest.chain.gz 2018-10-18 08:51 40M galGal6.carCri1.rbest.net.gz 2018-10-18 08:52 55M md5sum.txt 2018-10-18 08:52 256