This directory contains reciprocal-best netted chains for galGal5-xenTro9.
- galGal5.xenTro9.rbest.net.gz: galGal5-referenced recip.best net to xenTro9.
- galGal5.xenTro9.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from galGal5 to xenTro9 through the recip.best net.
- xenTro9.galGal5.rbest.net.gz: xenTro9-referenced recip.best net.
- xenTro9.galGal5.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/galGal5.xenTro9.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
xenTro9.galGal5.rbest.net.gz 2017-04-08 00:12 4.6M
xenTro9.galGal5.rbest.chain.gz 2017-04-08 00:13 2.6M
galGal5.xenTro9.rbest.chain.gz 2017-04-08 00:13 2.6M
galGal5.xenTro9.rbest.net.gz 2017-04-08 00:13 4.8M
md5sum.txt 2017-04-08 00:13 256
axtRBestNet/ 2017-04-08 01:58 -