This directory contains reciprocal-best netted chains for galGal5-melGal5.
- galGal5.melGal5.rbest.net.gz: galGal5-referenced recip.best net to melGal5.
- galGal5.melGal5.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from galGal5 to melGal5 through the recip.best net.
- melGal5.galGal5.rbest.net.gz: melGal5-referenced recip.best net.
- melGal5.galGal5.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/galGal5.melGal5.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-01-20 13:14 -
galGal5.melGal5.rbest.chain.gz 2017-01-20 08:03 21M
galGal5.melGal5.rbest.net.gz 2017-01-20 08:04 39M
md5sum.txt 2017-01-20 08:04 256
melGal5.galGal5.rbest.chain.gz 2017-01-20 08:03 21M
melGal5.galGal5.rbest.net.gz 2017-01-20 08:02 31M