This directory contains reciprocal-best netted chains for fr3-danRer10.
- fr3.danRer10.rbest.net.gz: fr3-referenced recip.best net to danRer10.
- fr3.danRer10.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from fr3 to danRer10 through the recip.best net.
- danRer10.fr3.rbest.net.gz: danRer10-referenced recip.best net.
- danRer10.fr3.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/fr3.danRer10.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-02-10 11:18 -
danRer10.fr3.rbest.chain.gz 2017-02-10 08:16 6.2M
danRer10.fr3.rbest.net.gz 2017-02-10 08:16 9.9M
fr3.danRer10.rbest.chain.gz 2017-02-10 08:17 6.2M
fr3.danRer10.rbest.net.gz 2017-02-10 08:17 9.7M
md5sum.txt 2017-02-10 08:17 244