This directory contains reciprocal-best netted chains for enhLutNer1-hg38.
- enhLutNer1.hg38.rbest.net.gz: enhLutNer1-referenced recip.best net to hg38.
- enhLutNer1.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from enhLutNer1 to hg38 through the recip.best net.
- hg38.enhLutNer1.rbest.net.gz: hg38-referenced recip.best net.
- hg38.enhLutNer1.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/enhLutNer1.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
hg38.enhLutNer1.rbest.net.gz 2019-12-22 09:32 160M
hg38.enhLutNer1.rbest.chain.gz 2019-12-22 09:34 82M
enhLutNer1.hg38.rbest.chain.gz 2019-12-22 09:35 82M
enhLutNer1.hg38.rbest.net.gz 2019-12-22 09:36 135M
md5sum.txt 2019-12-22 09:36 256
enhLutNer1.hg38.rbest.axt.gz 2019-12-22 14:28 1.0G
axtRBestNet/ 2019-12-22 14:39 -