This directory contains reciprocal-best netted chains for enhLutNer1-mm10.
- enhLutNer1.mm10.rbest.net.gz: enhLutNer1-referenced recip.best net to mm10.
- enhLutNer1.mm10.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from enhLutNer1 to mm10 through the recip.best net.
- mm10.enhLutNer1.rbest.net.gz: mm10-referenced recip.best net.
- mm10.enhLutNer1.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/enhLutNer1.mm10.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2020-04-16 17:40 -
enhLutNer1.hg38.rbest.chain.gz 2019-12-22 09:35 82M
enhLutNer1.hg38.rbest.net.gz 2019-12-22 09:36 135M
enhLutNer1.mm10.rbest.chain.gz 2020-04-16 15:03 56M
enhLutNer1.mm10.rbest.net.gz 2020-04-16 15:04 116M
hg38.enhLutNer1.rbest.chain.gz 2019-12-22 09:34 82M
hg38.enhLutNer1.rbest.net.gz 2019-12-22 09:32 160M
md5sum.txt 2020-04-16 15:04 256
mm10.enhLutNer1.rbest.chain.gz 2020-04-16 15:02 56M
mm10.enhLutNer1.rbest.net.gz 2020-04-16 15:01 89M