This directory contains the Drosophila virilis 1 August 2005 assembly
from Agencourt. The annotations are from UCSC and collaborators worldwide.
Files are updated nightly. The .txt.gz files contain the
database tables in a tab-delimited format compressed with gzip.
The .sql files contain the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droVir2
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
If you plan to download a large file or multiple files from
this directory, we recommend that you use ftp rather than
downloading the files via our website. To do so, ftp to
hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droVir2/database. To download multiple files,
use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the tables in this directory are freely usable for any
purpose.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-05-05 03:24 33
bigFiles.sql 2024-05-05 03:24 1.4K
tableList.txt.gz 2024-05-05 03:24 2.4K
tableList.sql 2024-05-05 03:24 1.6K
tableDescriptions.txt.gz 2024-05-04 02:03 4.8K
tableDescriptions.sql 2024-05-04 02:03 1.5K
hgFindSpec.txt.gz 2023-03-28 13:48 671
hgFindSpec.sql 2023-03-28 13:48 1.8K
trackDb.txt.gz 2023-03-28 13:48 20K
trackDb.sql 2023-03-28 13:48 2.1K
hgFindSpec_pushedout.txt.gz 2021-08-02 14:28 632
hgFindSpec_pushedout.sql 2021-08-02 14:28 1.8K
trackDb_pushedout.txt.gz 2021-08-02 14:28 18K
trackDb_pushedout.sql 2021-08-02 14:28 2.1K
gbLoaded.txt.gz 2020-08-19 04:39 44K
gbLoaded.sql 2020-08-19 04:39 1.6K
xenoRefSeqAli.txt.gz 2020-08-19 04:39 13M
xenoRefSeqAli.sql 2020-08-19 04:39 2.1K
xenoRefFlat.txt.gz 2020-08-19 04:36 12M
xenoRefFlat.sql 2020-08-19 04:36 1.7K
xenoRefGene.txt.gz 2020-08-19 04:35 14M
xenoRefGene.sql 2020-08-19 04:35 2.0K
mrnaOrientInfo.txt.gz 2020-08-19 04:20 1.6K
mrnaOrientInfo.sql 2020-08-19 04:20 1.8K
all_mrna.txt.gz 2020-08-19 04:20 6.3K
all_mrna.sql 2020-08-19 04:20 2.1K
intronEst.txt.gz 2016-05-15 08:29 1.0M
intronEst.sql 2016-05-15 08:29 2.1K
estOrientInfo.txt.gz 2016-05-15 08:29 290K
estOrientInfo.sql 2016-05-15 08:29 1.8K
all_est.txt.gz 2016-05-15 08:29 1.4M
all_est.sql 2016-05-15 08:29 2.1K
xenoMrna.txt.gz 2016-02-21 14:52 119M
xenoMrna.sql 2016-02-21 14:52 2.1K
microsat.txt.gz 2015-08-23 15:28 35K
microsat.sql 2015-08-23 15:28 1.5K
augustusGene.txt.gz 2015-07-26 13:07 737K
augustusGene.sql 2015-07-26 13:07 1.9K
grp.txt.gz 2014-03-02 03:40 222
grp.sql 2014-03-02 03:40 1.4K
simpleRepeat.sql 2013-10-01 12:48 1.1K
rmsk.sql 2013-10-01 12:48 1.0K
netDm2.sql 2013-10-01 12:48 1.3K
history.sql 2013-10-01 12:48 537
gold.sql 2013-10-01 12:48 711
genscanPep.sql 2013-10-01 12:48 330
genscan.sql 2013-10-01 12:48 748
geneMapper.sql 2013-10-01 12:48 754
gc5Base.sql 2013-10-01 12:48 892
gbDelete_tmp.sql 2013-10-01 12:48 326
gap.sql 2013-10-01 12:48 634
chromInfo.sql 2013-10-01 12:48 396
chainDm2Link.sql 2013-10-01 12:48 577
chainDm2.sql 2013-10-01 12:48 878
blastDm2FB.sql 2013-10-01 12:48 1.3K
geneMapper.txt.gz 2006-01-29 08:56 572K
gold.txt.gz 2006-01-27 06:10 261K
gap.txt.gz 2006-01-27 06:10 76K
gbDelete_tmp.txt.gz 2005-09-27 05:01 151K
simpleRepeat.txt.gz 2005-09-09 11:56 2.4M
rmsk.txt.gz 2005-09-09 11:56 5.1M
netDm2.txt.gz 2005-09-09 11:55 8.3M
history.txt.gz 2005-09-09 11:55 231
genscanPep.txt.gz 2005-09-09 11:55 5.0M
genscan.txt.gz 2005-09-09 11:55 832K
gc5Base.txt.gz 2005-09-09 11:55 1.0M
chromInfo.txt.gz 2005-09-09 11:54 69K
chainDm2Link.txt.gz 2005-09-09 11:53 77M
chainDm2.txt.gz 2005-09-09 11:52 9.9M
blastDm2FB.txt.gz 2005-09-09 11:52 1.5M