This directory contains the Drosophila persimilis 28 October 2005 assembly from the Broad Institute at MIT and Harvard. The annotations are from UCSC and collaborators worldwide. Files are updated nightly. The .txt.gz files contain the database tables in a tab-delimited format compressed with gzip. The .sql files contain the MySQL commands used to create the tables. To see descriptions of the tables underlying Genome Browser annotation tracks, select the table in the Table Browser: http://genome.ucsc.edu/cgi-bin/hgTables?db=droPer1 and click the "describe table schema" button. There is also a "view table schema" link on the configuration page for each track. If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/droPer1/database. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) All the tables in this directory are freely usable for any purpose.
Name Last modified Size Description
Parent Directory - augustusGene.sql 2015-07-26 12:49 1.9K augustusGene.txt.gz 2015-07-26 12:49 836K bigFiles.sql 2024-09-29 03:18 1.4K bigFiles.txt.gz 2024-09-29 03:18 73 blastDm2FB.sql 2013-10-01 12:48 1.3K blastDm2FB.txt.gz 2006-01-06 05:52 1.4M chainDm6.sql 2014-12-14 12:46 1.7K chainDm6.txt.gz 2014-12-14 12:46 6.7M chainDm6Link.sql 2014-12-14 12:46 1.5K chainDm6Link.txt.gz 2014-12-14 12:46 60M chromAlias.sql 2018-02-18 06:18 1.4K chromAlias.txt.gz 2018-02-18 06:18 117K chromInfo.sql 2013-10-01 12:48 396 chromInfo.txt.gz 2006-01-06 05:54 45K extNcbiRefSeq.sql 2018-02-09 14:05 1.5K extNcbiRefSeq.txt.gz 2018-02-09 14:05 90 gap.sql 2013-10-01 12:48 722 gap.txt.gz 2006-01-06 05:54 170K gbLoaded.sql 2020-08-19 02:47 1.6K gbLoaded.txt.gz 2020-08-19 02:47 31K gc5Base.sql 2013-10-01 12:48 892 gc5Base.txt.gz 2006-01-06 05:54 940K genscan.sql 2013-10-01 12:48 748 genscan.txt.gz 2006-01-06 05:54 887K genscanPep.sql 2013-10-01 12:48 330 genscanPep.txt.gz 2006-01-06 05:55 5.4M gold.sql 2013-10-01 12:48 799 gold.txt.gz 2006-01-06 05:55 299K grp.sql 2014-03-02 03:40 1.4K grp.txt.gz 2014-03-02 03:40 222 hgFindSpec.sql 2023-12-05 13:51 1.8K hgFindSpec.txt.gz 2023-12-05 13:51 891 history.sql 2013-10-01 12:48 537 history.txt.gz 2006-01-06 05:55 233 microsat.sql 2015-08-23 15:04 1.5K microsat.txt.gz 2015-08-23 15:04 11K ncbiRefSeq.sql 2018-02-09 13:35 2.0K ncbiRefSeq.txt.gz 2018-02-09 13:35 716K ncbiRefSeqCds.sql 2018-02-09 14:05 1.4K ncbiRefSeqCds.txt.gz 2018-02-09 14:05 79K ncbiRefSeqLink.sql 2018-02-09 13:35 2.0K ncbiRefSeqLink.txt.gz 2018-02-09 13:35 500K ncbiRefSeqOther.sql 2018-02-09 14:05 1.3K ncbiRefSeqOther.txt.gz 2018-02-09 14:05 75 ncbiRefSeqPepTable.sql 2018-02-09 14:05 1.4K ncbiRefSeqPepTable.txt.gz 2018-02-09 14:05 4.0M ncbiRefSeqPredicted.sql 2018-02-09 13:35 2.0K ncbiRefSeqPredicted.txt.gz 2018-02-09 13:35 716K ncbiRefSeqPsl.sql 2018-02-09 13:36 2.1K ncbiRefSeqPsl.txt.gz 2018-02-09 13:36 839K netDm6.sql 2014-12-14 12:47 2.1K netDm6.txt.gz 2014-12-14 12:47 7.8M rmsk.sql 2013-10-01 12:48 1.0K rmsk.txt.gz 2006-01-06 05:55 3.5M seqNcbiRefSeq.sql 2018-02-09 14:05 1.6K seqNcbiRefSeq.txt.gz 2018-02-09 14:05 247K simpleRepeat.sql 2013-10-01 12:48 1.1K simpleRepeat.txt.gz 2006-01-06 05:55 1.9M tableDescriptions.sql 2024-09-28 02:04 1.5K tableDescriptions.txt.gz 2024-09-28 02:04 5.4K tableList.sql 2024-09-29 03:18 1.6K tableList.txt.gz 2024-09-29 03:18 2.3K trackDb.sql 2023-12-05 13:51 2.1K trackDb.txt.gz 2023-12-05 13:51 19K ucscToRefSeq.sql 2018-02-18 06:18 1.4K ucscToRefSeq.txt.gz 2018-02-18 06:18 78K xenoMrna.sql 2016-02-21 14:32 2.1K xenoMrna.txt.gz 2016-02-21 14:32 110M xenoRefFlat.sql 2020-08-19 02:47 1.7K xenoRefFlat.txt.gz 2020-08-19 02:47 12M xenoRefGene.sql 2020-08-19 02:47 2.0K xenoRefGene.txt.gz 2020-08-19 02:47 13M xenoRefSeqAli.sql 2020-08-19 02:47 2.1K xenoRefSeqAli.txt.gz 2020-08-19 02:47 14M