This directory contains the Drosophila persimilis 28 October 2005 assembly
from the Broad Institute at MIT and Harvard. The annotations are from
UCSC and collaborators worldwide.
Files are updated nightly. The .txt.gz files contain the
database tables in a tab-delimited format compressed with gzip.
The .sql files contain the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droPer1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
If you plan to download a large file or multiple files from
this directory, we recommend that you use ftp rather than
downloading the files via our website. To do so, ftp to
hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droPer1/database. To download multiple files,
use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the tables in this directory are freely usable for any
purpose.
Name Last modified Size Description
Parent Directory -
augustusGene.sql 2015-07-26 12:49 1.9K
augustusGene.txt.gz 2015-07-26 12:49 836K
bigFiles.sql 2024-11-17 03:26 1.4K
bigFiles.txt.gz 2024-11-17 03:26 73
blastDm2FB.sql 2013-10-01 12:48 1.3K
blastDm2FB.txt.gz 2006-01-06 05:52 1.4M
chainDm6.sql 2014-12-14 12:46 1.7K
chainDm6.txt.gz 2014-12-14 12:46 6.7M
chainDm6Link.sql 2014-12-14 12:46 1.5K
chainDm6Link.txt.gz 2014-12-14 12:46 60M
chromAlias.sql 2018-02-18 06:18 1.4K
chromAlias.txt.gz 2018-02-18 06:18 117K
chromInfo.sql 2013-10-01 12:48 396
chromInfo.txt.gz 2006-01-06 05:54 45K
extNcbiRefSeq.sql 2018-02-09 14:05 1.5K
extNcbiRefSeq.txt.gz 2018-02-09 14:05 90
gap.sql 2013-10-01 12:48 722
gap.txt.gz 2006-01-06 05:54 170K
gbLoaded.sql 2020-08-19 02:47 1.6K
gbLoaded.txt.gz 2020-08-19 02:47 31K
gc5Base.sql 2013-10-01 12:48 892
gc5Base.txt.gz 2006-01-06 05:54 940K
genscan.sql 2013-10-01 12:48 748
genscan.txt.gz 2006-01-06 05:54 887K
genscanPep.sql 2013-10-01 12:48 330
genscanPep.txt.gz 2006-01-06 05:55 5.4M
gold.sql 2013-10-01 12:48 799
gold.txt.gz 2006-01-06 05:55 299K
grp.sql 2014-03-02 03:40 1.4K
grp.txt.gz 2014-03-02 03:40 222
hgFindSpec.sql 2023-12-05 13:51 1.8K
hgFindSpec.txt.gz 2023-12-05 13:51 891
history.sql 2013-10-01 12:48 537
history.txt.gz 2006-01-06 05:55 233
microsat.sql 2015-08-23 15:04 1.5K
microsat.txt.gz 2015-08-23 15:04 11K
ncbiRefSeq.sql 2018-02-09 13:35 2.0K
ncbiRefSeq.txt.gz 2018-02-09 13:35 716K
ncbiRefSeqCds.sql 2018-02-09 14:05 1.4K
ncbiRefSeqCds.txt.gz 2018-02-09 14:05 79K
ncbiRefSeqLink.sql 2018-02-09 13:35 2.0K
ncbiRefSeqLink.txt.gz 2018-02-09 13:35 500K
ncbiRefSeqOther.sql 2018-02-09 14:05 1.3K
ncbiRefSeqOther.txt.gz 2018-02-09 14:05 75
ncbiRefSeqPepTable.sql 2018-02-09 14:05 1.4K
ncbiRefSeqPepTable.txt.gz 2018-02-09 14:05 4.0M
ncbiRefSeqPredicted.sql 2018-02-09 13:35 2.0K
ncbiRefSeqPredicted.txt.gz 2018-02-09 13:35 716K
ncbiRefSeqPsl.sql 2018-02-09 13:36 2.1K
ncbiRefSeqPsl.txt.gz 2018-02-09 13:36 839K
netDm6.sql 2014-12-14 12:47 2.1K
netDm6.txt.gz 2014-12-14 12:47 7.8M
rmsk.sql 2013-10-01 12:48 1.0K
rmsk.txt.gz 2006-01-06 05:55 3.5M
seqNcbiRefSeq.sql 2018-02-09 14:05 1.6K
seqNcbiRefSeq.txt.gz 2018-02-09 14:05 247K
simpleRepeat.sql 2013-10-01 12:48 1.1K
simpleRepeat.txt.gz 2006-01-06 05:55 1.9M
tableDescriptions.sql 2024-11-16 02:03 1.5K
tableDescriptions.txt.gz 2024-11-16 02:03 5.4K
tableList.sql 2024-11-17 03:26 1.6K
tableList.txt.gz 2024-11-17 03:26 2.3K
trackDb.sql 2023-12-05 13:51 2.1K
trackDb.txt.gz 2023-12-05 13:51 19K
ucscToRefSeq.sql 2018-02-18 06:18 1.4K
ucscToRefSeq.txt.gz 2018-02-18 06:18 78K
xenoMrna.sql 2016-02-21 14:32 2.1K
xenoMrna.txt.gz 2016-02-21 14:32 110M
xenoRefFlat.sql 2020-08-19 02:47 1.7K
xenoRefFlat.txt.gz 2020-08-19 02:47 12M
xenoRefGene.sql 2020-08-19 02:47 2.0K
xenoRefGene.txt.gz 2020-08-19 02:47 13M
xenoRefSeqAli.sql 2020-08-19 02:47 2.1K
xenoRefSeqAli.txt.gz 2020-08-19 02:47 14M