This directory contains the Drosophila mojavensis 11 August 2004 assembly
from Agencourt Bioscience Corporation. The annotations were generated
by UCSC and collaborators worldwide.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droMoj1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this directory,
we recommend you use ftp rather than downloading the files via our website.
To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droMoj1/database. To download multiple files, use the "mget"
command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the annotations in this directory are freely usable for any purpose.
The D. mojavensis data have been freely provided by Agencourt Bioscience
Corporation before publication for use in the UCSC Genome Browser with the
following understanding:
1. The data may be freely downloaded, used in analyses, and repackaged in
databases.
2. Users are free to use the data in scientific papers analyzing particular
genes and regions, provided that the Agencourt is properly acknowledged.
3. Agencourt reserves the right to publish the initial large-scale analyses
of the dataset, including large-scale identification of regions of
evolutionary conservation and large-scale genomic assembly.
4. Any redistribution of the data should carry this notice.
Name Last modified Size Description
Parent Directory -
xenoRefSeqAli.txt.gz 2020-08-21 14:18 12M
xenoRefSeqAli.sql 2020-08-21 14:18 2.1K
xenoRefGene.txt.gz 2020-08-21 14:18 12M
xenoRefGene.sql 2020-08-21 14:18 2.0K
xenoRefFlat.txt.gz 2020-08-21 14:18 11M
xenoRefFlat.sql 2020-08-21 14:18 1.7K
xenoMrna.txt.gz 2016-02-21 14:20 119M
xenoMrna.sql 2016-02-21 14:20 2.4K
trackDb_pushedout.txt.gz 2021-08-02 14:28 11K
trackDb_pushedout.sql 2021-08-02 14:28 2.1K
trackDb.txt.gz 2023-03-28 13:48 11K
trackDb.sql 2023-03-28 13:48 2.1K
tableList.txt.gz 2024-04-14 03:30 2.1K
tableList.sql 2024-04-14 03:30 1.6K
tableDescriptions.txt.gz 2024-04-13 02:03 4.4K
tableDescriptions.sql 2024-04-13 02:03 1.5K
simpleRepeat.txt.gz 2004-12-13 15:28 2.6M
simpleRepeat.sql 2013-10-01 12:48 1.1K
rmsk.txt.gz 2004-12-13 15:28 6.8M
rmsk.sql 2013-10-01 12:48 1.1K
netDm2.txt.gz 2006-01-19 06:00 8.9M
netDm2.sql 2013-10-01 12:48 1.3K
mrnaOrientInfo.txt.gz 2017-10-22 06:29 689
mrnaOrientInfo.sql 2017-10-22 06:29 1.8K
microsat.txt.gz 2015-08-23 14:52 33K
microsat.sql 2015-08-23 14:52 1.5K
history.txt.gz 2004-12-13 15:28 230
history.sql 2013-10-01 12:48 537
hgFindSpec_pushedout.txt.gz 2021-08-02 14:28 621
hgFindSpec_pushedout.sql 2021-08-02 14:28 1.8K
hgFindSpec.txt.gz 2023-03-28 13:48 659
hgFindSpec.sql 2023-03-28 13:48 1.8K
grp.txt.gz 2014-03-02 03:40 223
grp.sql 2014-03-02 03:40 1.4K
genscanPep.txt.gz 2004-12-13 15:28 5.1M
genscanPep.sql 2013-10-01 12:48 330
genscan.txt.gz 2005-01-09 04:35 869K
genscan.sql 2013-10-01 12:48 748
geneid.txt.gz 2005-09-23 04:49 1.4M
geneid.sql 2013-10-01 12:48 1.0K
gcPercent.txt.gz 2004-12-13 15:28 151K
gcPercent.sql 2013-10-01 12:48 546
gbLoaded.txt.gz 2020-08-21 14:18 15K
gbLoaded.sql 2020-08-21 14:18 1.6K
gbDelete_tmp.txt.gz 2006-01-04 06:06 159K
gbDelete_tmp.sql 2013-10-01 12:48 326
gap.txt.gz 2004-12-13 15:27 28
gap.sql 2013-10-01 12:48 722
chromInfo.txt.gz 2004-12-13 15:27 127K
chromInfo.sql 2013-10-01 12:48 396
chainDm2Link.txt.gz 2006-01-19 05:59 61M
chainDm2Link.sql 2013-10-01 12:48 577
chainDm2.txt.gz 2006-01-19 05:58 6.5M
chainDm2.sql 2013-10-01 12:48 878
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
blastDm2FB.sql 2013-10-01 12:48 1.3K
bigFiles.txt.gz 2024-04-14 03:30 33
bigFiles.sql 2024-04-14 03:30 1.4K
augustusGene.txt.gz 2015-07-26 12:37 712K
augustusGene.sql 2015-07-26 12:37 1.9K
all_mrna.txt.gz 2017-10-22 06:29 2.3K
all_mrna.sql 2017-10-22 06:29 2.1K