This directory contains the Drosophila ananassae 15 July 2004 assembly
from TIGR. The annotations were generated by UCSC and collaborators
worldwide.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droAna1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from
this directory, we recommend that you use ftp rather than
downloading the files via our website. To do so, ftp to
hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droAna1/database. To download multiple files,
use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the annotations in this directory are freely usable for any
purpose. The D. ananassae data have been freely provided by TIGR before
publication for use in the UCSC Genome Browser with the following
understanding:
1. The data may be freely downloaded, used in analyses, and repackaged in
databases.
2. Users are free to use the data in scientific papers analyzing particular
genes and regions, provided that the TIGR is properly acknowledged.
3. TIGR reserves the right to publish the initial large-scale analyses of
the dataset, including large-scale identification of regions of
evolutionary conservation and large-scale genomic assembly.
4. Any redistribution of the data should carry this notice.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-04-14 03:30 33
bigFiles.sql 2024-04-14 03:30 1.4K
tableList.txt.gz 2024-04-14 03:30 2.1K
tableList.sql 2024-04-14 03:30 1.6K
tableDescriptions.txt.gz 2024-04-13 02:03 4.4K
tableDescriptions.sql 2024-04-13 02:03 1.5K
hgFindSpec.txt.gz 2023-03-28 13:48 654
hgFindSpec.sql 2023-03-28 13:48 1.8K
trackDb.txt.gz 2023-03-28 13:48 11K
trackDb.sql 2023-03-28 13:48 2.1K
hgFindSpec_pushedout.txt.gz 2021-08-02 14:28 616
hgFindSpec_pushedout.sql 2021-08-02 14:28 1.8K
trackDb_pushedout.txt.gz 2021-08-02 14:28 11K
trackDb_pushedout.sql 2021-08-02 14:28 2.1K
gbLoaded.txt.gz 2020-08-21 13:40 14K
gbLoaded.sql 2020-08-21 13:40 1.6K
xenoRefSeqAli.txt.gz 2020-08-21 13:40 13M
xenoRefSeqAli.sql 2020-08-21 13:40 2.1K
xenoRefFlat.txt.gz 2020-08-21 13:40 12M
xenoRefFlat.sql 2020-08-21 13:40 1.7K
xenoRefGene.txt.gz 2020-08-21 13:40 13M
xenoRefGene.sql 2020-08-21 13:40 2.0K
mrnaOrientInfo.txt.gz 2017-10-22 06:27 744
mrnaOrientInfo.sql 2017-10-22 06:27 1.8K
all_mrna.txt.gz 2017-10-22 06:27 2.8K
all_mrna.sql 2017-10-22 06:27 2.1K
xenoMrna.txt.gz 2016-02-21 13:56 116M
xenoMrna.sql 2016-02-21 13:56 2.4K
microsat.txt.gz 2015-08-23 14:28 1.4K
microsat.sql 2015-08-23 14:28 1.5K
augustusGene.txt.gz 2015-07-26 12:19 760K
augustusGene.sql 2015-07-26 12:19 1.9K
grp.txt.gz 2014-03-02 03:40 223
grp.sql 2014-03-02 03:40 1.4K
simpleRepeat.sql 2013-10-01 12:48 1.1K
rmsk.sql 2013-10-01 12:48 1.1K
netDm2.sql 2013-10-01 12:48 1.3K
history.sql 2013-10-01 12:48 537
genscanPep.sql 2013-10-01 12:48 330
genscan.sql 2013-10-01 12:48 748
geneid.sql 2013-10-01 12:48 1.0K
gcPercent.sql 2013-10-01 12:48 546
gbDelete_tmp.sql 2013-10-01 12:48 326
gap.sql 2013-10-01 12:48 722
chromInfo.sql 2013-10-01 12:48 396
chainDm2Link.sql 2013-10-01 12:48 577
chainDm2.sql 2013-10-01 12:48 878
blastDm2FB.sql 2013-10-01 12:48 1.3K
netDm2.txt.gz 2006-01-19 05:58 7.5M
chainDm2Link.txt.gz 2006-01-19 05:57 84M
chainDm2.txt.gz 2006-01-19 05:57 11M
gbDelete_tmp.txt.gz 2006-01-04 06:06 159K
geneid.txt.gz 2005-09-23 04:49 1.0M
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
genscan.txt.gz 2005-01-09 04:35 833K
simpleRepeat.txt.gz 2004-12-13 17:40 1.4M
rmsk.txt.gz 2004-12-13 17:40 3.2M
history.txt.gz 2004-12-13 17:39 238
genscanPep.txt.gz 2004-12-13 17:39 5.3M
gcPercent.txt.gz 2004-12-13 17:39 96K
gap.txt.gz 2004-12-13 17:38 146K
chromInfo.txt.gz 2004-12-13 17:38 62K