This directory contains reciprocal-best netted chains for danRer11-galGal6.
- danRer11.galGal6.rbest.net.gz: danRer11-referenced recip.best net to galGal6.
- danRer11.galGal6.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from danRer11 to galGal6 through the recip.best net.
- galGal6.danRer11.rbest.net.gz: galGal6-referenced recip.best net.
- galGal6.danRer11.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/danRer11.galGal6.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
galGal6.danRer11.rbest.net.gz 2018-10-25 12:27 11M
galGal6.danRer11.rbest.chain.gz 2018-10-25 12:27 6.2M
danRer11.galGal6.rbest.chain.gz 2018-10-25 12:27 6.2M
danRer11.galGal6.rbest.net.gz 2018-10-25 12:28 10M
md5sum.txt 2018-10-25 12:28 260
axtRBestNet/ 2018-10-25 15:39 -