This directory contains reciprocal-best netted chains for danRer10-melGal5.
- danRer10.melGal5.rbest.net.gz: danRer10-referenced recip.best net to melGal5.
- danRer10.melGal5.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from danRer10 to melGal5 through the recip.best net.
- melGal5.danRer10.rbest.net.gz: melGal5-referenced recip.best net.
- melGal5.danRer10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/danRer10.melGal5.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-01-20 10:07 -
danRer10.melGal5.rbest.chain.gz 2017-01-20 07:57 2.3M
danRer10.melGal5.rbest.net.gz 2017-01-20 07:57 3.8M
md5sum.txt 2017-01-20 07:57 260
melGal5.danRer10.rbest.chain.gz 2017-01-20 07:57 2.3M
melGal5.danRer10.rbest.net.gz 2017-01-20 07:57 3.9M