This directory contains reciprocal-best netted chains for galGal6-hg38.
- galGal6.hg38.rbest.net.gz: galGal6-referenced recip.best net to hg38.
- galGal6.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from galGal6 to hg38 through the recip.best net.
- hg38.galGal6.rbest.net.gz: hg38-referenced recip.best net.
- hg38.galGal6.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/galGal6.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2018-11-09 15:47 -
galGal6.hg38.rbest.chain.gz 2018-10-12 13:31 8.4M
galGal6.hg38.rbest.net.gz 2018-10-12 13:31 15M
hg38.galGal6.rbest.chain.gz 2018-10-12 13:31 8.4M
hg38.galGal6.rbest.net.gz 2018-10-12 13:31 15M
md5sum.txt 2018-10-12 13:31 244