This directory contains reciprocal-best netted chains for criGriChoV2-mm10.

 - criGriChoV2.mm10.rbest.net.gz: criGriChoV2-referenced recip.best net to mm10.
 - criGriChoV2.mm10.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from criGriChoV2 to mm10 through the recip.best net.

 - mm10.criGriChoV2.rbest.net.gz: mm10-referenced recip.best net.
 - mm10.criGriChoV2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/criGriChoV2.mm10.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                            Last modified      Size  Description
      Parent Directory                                     -   
      mm10.criGriChoV2.rbest.net.gz   2018-01-08 21:14  142M  
      mm10.criGriChoV2.rbest.chain.gz 2018-01-08 21:16   78M  
      md5sum.txt                      2018-01-08 21:19  260   
      criGriChoV2.mm10.rbest.net.gz   2018-01-08 21:19  133M  
      criGriChoV2.mm10.rbest.chain.gz 2018-01-08 21:17   78M  
      axtRBestNet/                    2019-06-04 10:49    -