This directory contains a dump of the UCSC genome annotation
database for the Jul. 2002 freeze of the C. briggsae genome
(cb1, version cb25.agp8) deposited into Wormbase as of 11 July 2002.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=cb1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then
go to the directory goldenPath/cbJul2002/database/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
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The C. briggsae sequence is made freely available to the community by the
Genome Sequencing Center at the WUSTL School of Medicine. Please see the
WUSTL data use policy at http://genome.wustl.edu/data.cgi for data use
restrictions and citation information.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-04-28 03:30 33
bigFiles.sql 2024-04-28 03:30 1.4K
tableList.txt.gz 2024-04-28 03:30 2.2K
tableList.sql 2024-04-28 03:30 1.6K
tableDescriptions.txt.gz 2024-04-27 02:03 4.4K
tableDescriptions.sql 2024-04-27 02:03 1.5K
hgFindSpec.txt.gz 2023-03-28 13:47 563
hgFindSpec.sql 2023-03-28 13:47 1.8K
trackDb.txt.gz 2023-03-28 13:47 12K
trackDb.sql 2023-03-28 13:47 2.1K
hgFindSpec_pushedout.txt.gz 2021-08-02 14:23 526
hgFindSpec_pushedout.sql 2021-08-02 14:23 1.8K
trackDb_pushedout.txt.gz 2021-08-02 14:23 11K
trackDb_pushedout.sql 2021-08-02 14:23 2.1K
gbLoaded.txt.gz 2020-08-21 04:40 172K
gbLoaded.sql 2020-08-21 04:40 1.7K
xenoRefSeqAli.txt.gz 2020-08-21 04:40 13M
xenoRefSeqAli.sql 2020-08-21 04:40 2.3K
xenoRefFlat.txt.gz 2020-08-21 04:40 9.9M
xenoRefFlat.sql 2020-08-21 04:40 1.8K
xenoRefGene.txt.gz 2020-08-21 04:40 12M
xenoRefGene.sql 2020-08-21 04:40 2.1K
all_mrna.txt.gz 2017-01-08 12:11 11K
all_mrna.sql 2017-01-08 12:11 2.3K
mrnaOrientInfo.txt.gz 2017-01-08 12:11 3.3K
mrnaOrientInfo.sql 2017-01-08 12:11 1.9K
estOrientInfo.txt.gz 2016-06-05 09:15 28K
estOrientInfo.sql 2016-06-05 09:15 1.9K
all_est.txt.gz 2016-06-05 09:15 131K
all_est.sql 2016-06-05 09:15 2.3K
microsat.txt.gz 2015-08-23 11:57 9.2K
microsat.sql 2015-08-23 11:57 1.5K
augustusGene.txt.gz 2015-07-26 11:11 1.4M
augustusGene.sql 2015-07-26 11:11 1.9K
grp.txt.gz 2014-03-02 03:40 236
grp.sql 2014-03-02 03:40 1.4K
twinscanPep.sql 2013-10-01 12:48 328
twinscan.sql 2013-10-01 12:48 1.0K
simpleRepeat.sql 2013-10-01 12:48 1.1K
seq.sql 2013-10-01 12:48 588
history.sql 2013-10-01 12:48 499
gcPercent.sql 2013-10-01 12:48 544
extFile.sql 2013-10-01 12:48 443
chromInfo.sql 2013-10-01 12:48 394
chrUn_rmsk.sql 2013-10-01 12:48 1.0K
chrUn_gold.sql 2013-10-01 12:48 781
chrUn_gap.sql 2013-10-01 12:48 704
chrUn_chainCe2Link.sql 2013-10-01 12:48 582
chrUn_chainCe2.sql 2013-10-01 12:48 859
chrUn_blastzCe2.sql 2013-10-01 12:48 1.3K
intronEst.txt.gz 2008-03-18 03:47 67K
intronEst.sql 2008-03-18 03:47 2.1K
twinscan.txt.gz 2004-12-05 05:16 1.4M
twinscanPep.txt.gz 2004-12-05 05:16 4.8M
chrUn_chainCe2Link.txt.gz 2004-05-25 05:14 70M
chrUn_chainCe2.txt.gz 2004-05-25 05:13 30M
chrUn_blastzCe2.txt.gz 2004-05-25 05:12 83M
simpleRepeat.txt.gz 2003-06-24 12:22 896K
seq.txt.gz 2003-06-24 12:22 29K
history.txt.gz 2003-06-24 12:22 189
gcPercent.txt.gz 2003-06-24 12:22 32K
extFile.txt.gz 2003-06-24 12:22 90
chromInfo.txt.gz 2003-06-24 12:22 69
chrUn_rmsk.txt.gz 2003-06-24 12:22 723K
chrUn_gold.txt.gz 2003-06-24 12:22 11K
chrUn_gap.txt.gz 2003-06-24 12:22 6.9K