This directory contains zipped multiple alignments of the 
human (hg17, May 2004), mouse (mm6, March 2005), and rat 
(rn3, June 2003) assemblies to the dog (canFam2, May 2005) 
assembly. The chr*.maf.gz files each contain all the 
alignments to that particular dog chromosome.  

For a description of multiple alignment format (MAF), see
http://genome.ucsc.edu/goldenPath/help/maf.html.

If you plan to download a large file or multiple files from 
this directory, we recommend that you use ftp rather than 
downloading the files via our website. To do so, ftp to 
hgdownload.cse.ucsc.edu, then go to the directory 
goldenPath/canFam2/multiz4way/. To download multiple files, 
use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the tables in this directory are freely usable for any 
purpose. 

The dog genome sequence is made freely available by the Dog Genome Sequencing
Project. Please cite the following publication when using these data:

Lindblad-Toh K, et al. Genome sequence, comparative analysis and haplotype
structure of the domestic dog. Nature. 2005 Dec 8;438:803-19.

      Name                    Last modified      Size  Description
Parent Directory - chr1.maf.gz 2005-12-13 16:12 89M chrX.maf.gz 2005-12-13 16:37 73M chr5.maf.gz 2005-12-13 16:32 72M chr4.maf.gz 2005-12-13 16:31 69M chr3.maf.gz 2005-12-13 16:27 69M chr2.maf.gz 2005-12-13 16:20 66M chr7.maf.gz 2005-12-13 16:34 63M chr11.maf.gz 2005-12-13 16:14 58M chr8.maf.gz 2005-12-13 16:35 57M chr6.maf.gz 2005-12-13 16:33 57M chr12.maf.gz 2005-12-13 16:14 53M chr10.maf.gz 2005-12-13 16:13 53M chr17.maf.gz 2005-12-13 16:18 50M chr9.maf.gz 2005-12-13 16:36 50M chr15.maf.gz 2005-12-13 16:17 50M chr14.maf.gz 2005-12-13 16:16 49M chr13.maf.gz 2005-12-13 16:15 48M chr20.maf.gz 2005-12-13 16:21 45M chr22.maf.gz 2005-12-13 16:22 45M chr16.maf.gz 2005-12-13 16:17 43M chr18.maf.gz 2005-12-13 16:18 41M chr23.maf.gz 2005-12-13 16:22 39M chr24.maf.gz 2005-12-13 16:23 38M chr21.maf.gz 2005-12-13 16:21 38M chr25.maf.gz 2005-12-13 16:24 38M chr19.maf.gz 2005-12-13 16:19 37M chr28.maf.gz 2005-12-13 16:25 34M chr27.maf.gz 2005-12-13 16:25 34M chr34.maf.gz 2005-12-13 16:29 32M chr30.maf.gz 2005-12-13 16:27 32M chr29.maf.gz 2005-12-13 16:25 31M chr32.maf.gz 2005-12-13 16:28 28M chr31.maf.gz 2005-12-13 16:27 28M chr26.maf.gz 2005-12-13 16:24 26M chr37.maf.gz 2005-12-13 16:30 26M chr36.maf.gz 2005-12-13 16:29 25M chr33.maf.gz 2005-12-13 16:28 25M chr35.maf.gz 2005-12-13 16:29 20M chr38.maf.gz 2005-12-13 16:30 19M chrUn.maf.gz 2005-12-13 16:36 10M chrM.maf.gz 2005-12-13 16:36 22K md5sum.txt 2005-12-13 16:37 1.9K maf/ 2019-11-06 10:41 -