This directory contains the Jul. 2004 assembly of the dog genome
(UCSC version canFam1) produced by the Broad Institute at MIT.  

Files included in this directory:

chr*.fa.zip: compressed FASTA sequence of each chromosome.
    Repeats (from RepeatMasker and Tandem Repeat Finder) 
    are in lower case while non-repeating sequence is in upper case.
    RepeatMasker March 2004 version with RepBase libraries:
    RepBase Update 8.12, RM database version 20040306.

-------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/canFam1/chromosomes. To download multiple files, 
use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory)


The dog genome sequence is made freely available by the Dog Genome Sequencing
Project. Please cite the following publication when using these data:

Lindblad-Toh K, et al. Genome sequence, comparative analysis and haplotype
structure of the domestic dog. Nature. 2005 Dec 8;438:803-19.

      Name                    Last modified      Size  Description
Parent Directory - chr1.fa.zip 2004-07-07 16:48 38M chr10.fa.zip 2004-07-07 16:49 22M chr11.fa.zip 2004-07-07 16:50 23M chr12.fa.zip 2004-07-07 16:51 23M chr13.fa.zip 2004-07-07 16:52 20M chr14.fa.zip 2004-07-07 16:52 19M chr15.fa.zip 2004-07-07 16:53 20M chr16.fa.zip 2004-07-07 16:54 18M chr17.fa.zip 2004-07-07 16:55 20M chr18.fa.zip 2004-07-07 16:56 20M chr19.fa.zip 2004-07-07 16:57 17M chr2.fa.zip 2004-07-07 16:58 26M chr20.fa.zip 2004-07-07 16:59 18M chr21.fa.zip 2004-07-07 16:59 16M chr22.fa.zip 2004-07-07 17:00 19M chr23.fa.zip 2004-07-07 17:01 16M chr24.fa.zip 2004-07-07 17:02 15M chr25.fa.zip 2004-07-07 17:02 16M chr26.fa.zip 2004-07-07 17:03 12M chr27.fa.zip 2004-07-07 17:04 14M chr28.fa.zip 2004-07-07 17:04 12M chr29.fa.zip 2004-07-07 17:05 13M chr3.fa.zip 2004-07-07 17:06 29M chr30.fa.zip 2004-07-07 17:07 13M chr31.fa.zip 2004-07-07 17:07 12M chr32.fa.zip 2004-07-07 17:08 12M chr33.fa.zip 2004-07-07 17:08 9.8M chr34.fa.zip 2004-07-07 17:09 13M chr35.fa.zip 2004-07-07 17:09 8.3M chr36.fa.zip 2004-07-07 17:10 9.7M chr37.fa.zip 2004-07-07 17:10 9.6M chr38.fa.zip 2004-07-07 17:11 7.3M chr4.fa.zip 2004-07-07 17:12 28M chr5.fa.zip 2004-07-07 17:13 28M chr6.fa.zip 2004-07-07 17:14 24M chr7.fa.zip 2004-07-07 17:15 25M chr8.fa.zip 2004-07-07 17:16 23M chr9.fa.zip 2004-07-07 17:17 16M chrM.fa.zip 2004-07-07 17:17 5.5K chrUn.fa.zip 2004-07-07 17:18 21M chrX.fa.zip 2004-07-07 17:19 38M md5sum.txt 2004-07-07 17:24 1.9K