This directory contains reciprocal-best netted chains for braFlo1-hg18.

 - braFlo1-referenced net to hg18.
 - braFlo1.hg18.rbest.chain.gz: chains extracted from the
   net.  These can be passed to the liftOver program to translate coords
   from braFlo1 to hg18 through the net.

 - hg18-referenced net.
 - hg18.braFlo1.rbest.chain.gz: "liftOver" chains.

 - axtRBestNet/chr*.braFlo1.hg18.rbest.axt.gz: chained and netted alignments,
   i.e. the best chains in the Lanclet genome, with gaps in the best
   chains filled in by next-best chains where possible.  Only alignments
   that are reciprocal best are kept.  The axt format is
   described in .
      Name                        Last modified      Size  Description
Parent Directory - md5sum.txt 2008-06-03 11:53 244 2008-04-29 13:33 2.2M hg18.braFlo1.rbest.chain.gz 2008-04-29 13:33 1.4M 2008-04-29 13:33 2.1M braFlo1.hg18.rbest.chain.gz 2008-04-29 13:33 1.4M axtRBestNet/ 2008-06-03 12:44 -