This directory contains the Apis mellifera Amel_1.2 assembly
(apiMel1, Jul. 2004) from the Baylor College of Medicine HGSC Honey
Bee Genome Project. For more information, see the Baylor website:
http://www.hgsc.bcm.tmc.edu/projects/honeybee/.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=apiMel1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the files
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to
the directory goldenPath/apiMel1/database/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the annotations in this directory are freely usable for any purpose.
For conditions of use regarding the A. mellifera sequence data, see
http://www.hgsc.bcm.tmc.edu/projects/conditions_for_use.html.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-12-08 03:29 33
grp.txt.gz 2014-03-02 03:37 223
history.txt.gz 2004-12-22 13:07 232
gbDelete_tmp.sql 2013-10-01 12:48 326
genscanPep.sql 2013-10-01 12:48 330
chromInfo.sql 2013-10-01 12:48 396
history.sql 2013-10-01 12:48 537
gcPercent.sql 2013-10-01 12:48 546
chainDm2Link.sql 2013-10-01 12:48 577
hgFindSpec.txt.gz 2023-03-28 13:46 654
gap.sql 2013-10-01 12:48 722
genscan.sql 2013-10-01 12:48 748
gold.sql 2013-10-01 12:48 799
chainDm2.sql 2013-10-01 12:48 878
rmsk.sql 2013-10-01 12:48 1.1K
simpleRepeat.sql 2013-10-01 12:48 1.1K
netDm2.sql 2013-10-01 12:48 1.3K
netSyntenyDm1.sql 2013-10-01 12:48 1.3K
blastDm1FB.sql 2013-10-01 12:48 1.3K
grp.sql 2014-03-02 03:37 1.4K
bigFiles.sql 2024-12-08 03:29 1.4K
tableDescriptions.sql 2024-12-07 02:03 1.5K
microsat.sql 2015-08-23 09:48 1.5K
tableList.sql 2024-12-08 03:29 1.6K
gbLoaded.sql 2020-08-20 21:06 1.6K
xenoRefFlat.sql 2020-08-20 21:06 1.7K
hgFindSpec.sql 2023-03-28 13:46 1.8K
estOrientInfo.sql 2016-06-05 08:57 1.8K
mrnaOrientInfo.sql 2020-08-20 20:23 1.8K
augustusGene.sql 2015-07-26 10:05 1.9K
xenoRefGene.sql 2020-08-20 21:06 2.0K
trackDb.sql 2023-03-28 13:46 2.1K
all_est.sql 2016-06-05 08:56 2.1K
intronEst.sql 2016-06-05 08:57 2.1K
all_mrna.sql 2020-08-20 20:23 2.1K
xenoRefSeqAli.sql 2020-08-20 21:06 2.1K
tableList.txt.gz 2024-12-08 03:29 2.3K
xenoMrna.sql 2016-02-21 09:42 2.4K
tableDescriptions.txt.gz 2024-12-07 02:03 4.6K
trackDb.txt.gz 2023-03-28 13:46 13K
netSyntenyDm1.txt.gz 2004-12-22 13:07 31K
microsat.txt.gz 2015-08-23 09:48 43K
gbLoaded.txt.gz 2020-08-20 21:06 43K
chromInfo.txt.gz 2004-12-22 13:07 52K
gcPercent.txt.gz 2004-12-22 13:07 97K
gap.txt.gz 2004-12-22 13:07 143K
gbDelete_tmp.txt.gz 2005-09-28 04:51 180K
gold.txt.gz 2004-12-22 13:07 289K
augustusGene.txt.gz 2015-07-26 10:05 711K
estOrientInfo.txt.gz 2016-06-05 08:57 805K
genscan.txt.gz 2005-01-09 04:31 841K
blastDm1FB.txt.gz 2004-12-22 13:06 914K
chainDm2.txt.gz 2006-01-19 05:51 1.2M
intronEst.txt.gz 2016-06-05 08:57 1.2M
mrnaOrientInfo.txt.gz 2020-08-20 20:23 1.4M
simpleRepeat.txt.gz 2004-12-22 13:07 2.2M
netDm2.txt.gz 2006-01-19 05:51 2.6M
all_est.txt.gz 2016-06-05 08:56 2.7M
genscanPep.txt.gz 2004-12-22 13:07 4.0M
all_mrna.txt.gz 2020-08-20 20:23 6.2M
rmsk.txt.gz 2004-12-22 13:07 7.3M
xenoRefFlat.txt.gz 2020-08-20 21:06 9.8M
xenoRefGene.txt.gz 2020-08-20 21:06 11M
xenoRefSeqAli.txt.gz 2020-08-20 21:06 11M
chainDm2Link.txt.gz 2006-01-19 05:51 19M
xenoMrna.txt.gz 2016-02-21 09:43 121M