This directory contains a dump of the UCSC genome annotation database
for the Feb. 2003 release of the A. gambiae genome (anoGam1) from
the International Anopheles Genome Project (version MOZ2).
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=anoGam1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
-----------------------------------------------------------------
If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu,
then go to the directory goldenPath/anoGam1/database/. To download
multiple files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
The A. gambiae sequence is made freely available by The International
Anopheles Genome Project. All the annotations in this directory are
freely available for public use.
Name Last modified Size Description
Parent Directory -
bigFiles.txt.gz 2024-04-28 03:26 33
bigFiles.sql 2024-04-28 03:26 1.4K
tableList.txt.gz 2024-04-28 03:26 4.7K
tableList.sql 2024-04-28 03:26 1.6K
tableDescriptions.txt.gz 2024-04-27 02:03 5.1K
tableDescriptions.sql 2024-04-27 02:03 1.5K
hgFindSpec.txt.gz 2023-03-28 13:46 905
hgFindSpec.sql 2023-03-28 13:46 1.8K
trackDb.txt.gz 2023-03-28 13:46 27K
trackDb.sql 2023-03-28 13:46 2.1K
hgFindSpec_pushedout.txt.gz 2021-12-27 12:21 866
hgFindSpec_pushedout.sql 2021-12-27 12:21 1.8K
trackDb_pushedout.txt.gz 2021-12-27 12:21 25K
trackDb_pushedout.sql 2021-12-27 12:21 2.1K
gbLoaded.txt.gz 2020-08-20 20:23 210K
gbLoaded.sql 2020-08-20 20:23 1.7K
xenoRefSeqAli.txt.gz 2020-08-20 20:23 6.6M
xenoRefSeqAli.sql 2020-08-20 20:23 2.1K
xenoRefFlat.txt.gz 2020-08-20 20:23 5.8M
xenoRefFlat.sql 2020-08-20 20:23 1.7K
xenoRefGene.txt.gz 2020-08-20 20:23 6.5M
xenoRefGene.sql 2020-08-20 20:23 2.0K
xenoMrna.txt.gz 2020-08-20 19:42 118M
xenoMrna.sql 2020-08-20 19:42 2.4K
mrnaOrientInfo.txt.gz 2020-03-01 04:47 721K
mrnaOrientInfo.sql 2020-03-01 04:47 1.9K
all_mrna.txt.gz 2020-03-01 04:47 3.0M
all_mrna.sql 2020-03-01 04:47 2.4K
chr3L_mrna.txt.gz 2020-03-01 04:47 394K
chr3L_mrna.sql 2020-03-01 04:47 2.4K
chr3R_mrna.txt.gz 2020-03-01 04:46 656K
chr3R_mrna.sql 2020-03-01 04:46 2.4K
chr2L_mrna.txt.gz 2019-07-14 05:14 565K
chr2L_mrna.sql 2019-07-14 05:14 2.4K
chr2R_mrna.txt.gz 2017-11-26 05:29 1.0M
chr2R_mrna.sql 2017-11-26 05:29 2.4K
chrX_mrna.txt.gz 2017-04-23 10:32 145K
chrX_mrna.sql 2017-04-23 10:32 2.4K
chrX_intronEst.txt.gz 2016-06-12 06:06 248K
chrX_intronEst.sql 2016-06-12 06:06 2.4K
chr3R_intronEst.txt.gz 2016-06-12 06:06 631K
chr3R_intronEst.sql 2016-06-12 06:06 2.4K
chr2L_intronEst.txt.gz 2016-06-12 06:06 658K
chr2L_intronEst.sql 2016-06-12 06:06 2.4K
chrU_mrna.txt.gz 2016-06-12 06:06 241K
chrU_mrna.sql 2016-06-12 06:06 2.4K
all_est.txt.gz 2016-06-12 06:05 6.1M
chr3R_est.txt.gz 2016-06-12 06:05 1.2M
all_est.sql 2016-06-12 06:05 2.4K
estOrientInfo.txt.gz 2016-06-12 06:05 1.7M
chr3R_est.sql 2016-06-12 06:05 2.4K
estOrientInfo.sql 2016-06-12 06:05 1.9K
chr2R_est.txt.gz 2016-06-12 06:05 1.8M
chr2R_est.sql 2016-06-12 06:05 2.4K
chrX_est.txt.gz 2016-06-12 06:05 540K
chrX_est.sql 2016-06-12 06:05 2.4K
chrM_mrna.txt.gz 2016-06-12 06:05 665
chrM_mrna.sql 2016-06-12 06:05 2.4K
chrM_est.txt.gz 2016-06-12 06:05 207K
chrM_est.sql 2016-06-12 06:05 2.4K
chr3L_intronEst.txt.gz 2016-06-12 06:05 462K
chr3L_intronEst.sql 2016-06-12 06:05 2.4K
chr2R_intronEst.txt.gz 2016-06-12 06:05 958K
chr3L_est.txt.gz 2016-06-12 06:05 863K
chr3L_est.sql 2016-06-12 06:05 2.4K
chr2R_intronEst.sql 2016-06-12 06:05 2.4K
chr2L_est.txt.gz 2016-06-12 06:05 1.3M
chrU_intronEst.txt.gz 2016-06-12 06:05 129K
chrU_intronEst.sql 2016-06-12 06:05 2.4K
chrU_est.txt.gz 2016-06-12 06:05 339K
chrU_est.sql 2016-06-12 06:05 2.4K
chr2L_est.sql 2016-06-12 06:05 2.4K
microsat.txt.gz 2015-08-23 09:42 46K
microsat.sql 2015-08-23 09:42 1.5K
augustusGene.txt.gz 2015-07-26 10:05 713K
augustusGene.sql 2015-07-26 10:05 1.9K
netDm6.txt.gz 2014-12-14 08:42 1.8M
netDm6.sql 2014-12-14 08:42 2.1K
chainDm6Link.txt.gz 2014-12-14 08:42 16M
chainDm6Link.sql 2014-12-14 08:42 1.5K
chainDm6.txt.gz 2014-12-14 08:42 2.2M
chainDm6.sql 2014-12-14 08:42 1.7K
grp.txt.gz 2014-03-02 03:37 223
grp.sql 2014-03-02 03:37 1.4K
simpleRepeat.sql 2013-10-01 12:48 1.1K
history.sql 2013-10-01 12:48 537
genscanPep.sql 2013-10-01 12:48 330
genscan.sql 2013-10-01 12:48 748
geneid.sql 2013-10-01 12:48 1.0K
gcPercent.sql 2013-10-01 12:48 546
gbDelete_tmp.sql 2013-10-01 12:48 326
ensPep.sql 2013-10-01 12:48 322
ensGtp.sql 2013-10-01 12:48 438
ensGene.sql 2013-10-01 12:48 1.0K
chromInfo.sql 2013-10-01 12:48 396
chrX_rmsk.sql 2013-10-01 12:48 1.0K
chrX_gold.sql 2013-10-01 12:48 781
chrX_gap.sql 2013-10-01 12:48 704
chrU_rmsk.sql 2013-10-01 12:48 1.0K
chrU_gold.sql 2013-10-01 12:48 781
chrU_gap.sql 2013-10-01 12:48 704
chrM_rmsk.sql 2013-10-01 12:48 1.0K
chrM_gap.sql 2013-10-01 12:48 615
chr3R_rmsk.sql 2013-10-01 12:48 1.0K
chr3R_gold.sql 2013-10-01 12:48 783
chr3R_gap.sql 2013-10-01 12:48 706
chr3L_rmsk.sql 2013-10-01 12:48 1.0K
chr3L_gold.sql 2013-10-01 12:48 783
chr3L_gap.sql 2013-10-01 12:48 706
chr2R_rmsk.sql 2013-10-01 12:48 1.0K
chr2R_gold.sql 2013-10-01 12:48 783
chr2R_gap.sql 2013-10-01 12:48 706
chr2L_rmsk.sql 2013-10-01 12:48 1.0K
chr2L_gold.sql 2013-10-01 12:48 783
chr2L_gap.sql 2013-10-01 12:48 706
blastDm2FB.sql 2013-10-01 12:48 1.3K
anoEstTcl.sql 2013-10-01 12:48 946
anoEstNcl.sql 2013-10-01 12:48 946
anoEstExpressed.sql 2013-10-01 12:48 307
chrM_intronEst.txt.gz 2008-03-18 03:23 106
chrM_intronEst.sql 2008-03-18 03:23 2.2K
gbDelete_tmp.txt.gz 2005-09-28 04:49 180K
geneid.txt.gz 2005-09-23 04:48 897K
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
anoEstTcl.txt.gz 2005-06-10 04:24 539K
anoEstNcl.txt.gz 2005-06-10 04:23 1.0M
anoEstExpressed.txt.gz 2005-06-10 04:23 20K
genscan.txt.gz 2005-01-09 04:31 1.3M
gcPercent.txt.gz 2004-10-24 04:18 85K
simpleRepeat.txt.gz 2004-08-09 19:15 1.6M
history.txt.gz 2004-08-09 19:13 315
genscanPep.txt.gz 2004-08-09 19:13 7.6M
ensPep.txt.gz 2004-08-09 19:12 3.3M
ensGtp.txt.gz 2004-08-09 19:12 156K
chromInfo.txt.gz 2004-08-09 19:11 155
chrX_rmsk.txt.gz 2004-08-09 19:11 423K
chrX_gold.txt.gz 2004-08-09 19:11 273
chrX_gap.txt.gz 2004-08-09 19:11 194
ensGene.txt.gz 2004-08-09 19:11 790K
chrU_rmsk.txt.gz 2004-08-09 19:11 801K
chrU_gold.txt.gz 2004-08-09 19:11 144K
chrU_gap.txt.gz 2004-08-09 19:11 99K
chrM_rmsk.txt.gz 2004-08-09 19:11 1.0K
chrM_gap.txt.gz 2004-08-09 19:11 33
chr3R_rmsk.txt.gz 2004-08-09 19:11 556K
chr3R_gold.txt.gz 2004-08-09 19:11 235
chr3R_gap.txt.gz 2004-08-09 19:11 171
chr3L_rmsk.txt.gz 2004-08-09 19:11 444K
chr3L_gold.txt.gz 2004-08-09 19:10 486
chr3L_gap.txt.gz 2004-08-09 19:10 327
chr2R_rmsk.txt.gz 2004-08-09 19:10 651K
chr2R_gold.txt.gz 2004-08-09 19:10 489
chr2R_gap.txt.gz 2004-08-09 19:10 325
chr2L_rmsk.txt.gz 2004-08-09 19:10 564K
chr2L_gold.txt.gz 2004-08-09 19:10 245
chr2L_gap.txt.gz 2004-08-09 19:10 171