0 evaSnp4,1123 evaSnp5,1123 nestedRepeats,237 transMapEnsemblV5,669 transMapEstV5,638 transMapRefSeqV5,638 transMapRnaV5,638 transMapV5,744 uniprot,1822 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1 refGene,301 refSeqComposite,1269 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.5 augustusGene,138 est,705 intronEst,786 mrna,421 transMapEnsemblV5,224 transMapEnsemblV5,358 transMapEstV5,193 transMapEstV5,327 transMapRefSeqV5,193 transMapRefSeqV5,327 transMapRnaV5,193 transMapRnaV5,327 transMapV5,299 transMapV5,433 xenoRefGene,261 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 est,665 intronEst,746 transMapV5,109 067 gap,133 1 animalQtl,431 augustusGene,310 chainHg19,385 chainHg19,516 chainHg19,706 chainHg19,1105 chainNetHg19,388 chainNetHg19,519 chainNetHg19,709 chainNetHg19,1108 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 ensGene,200 ensGene,202 est,788 evaSnp4,1246 evaSnp5,1246 genscan,227 intronEst,872 mrna,505 netHg19,385 netHg19,516 netHg19,706 netHg19,1105 refGene,425 refSeqComposite,1812 transMapEnsemblV5,778 transMapEstV5,747 transMapRefSeqV5,747 transMapRnaV5,747 transMapV5,853 uniprot,1110 uniprot,1314 uniprot,1346 uniprot,1490 uniprot,1927 xenoMrna,496 xenoMrna,580 xenoRefGene,384 1-4 animalQtl,432 1-6 animalQtl,362 1.0 transMapEnsemblV5,366 transMapEstV5,335 transMapRefSeqV5,335 transMapRnaV5,335 transMapV5,441 10 animalQtl,316 gap,136 uniprot,1928 10.1093 evaSnp4,1203 evaSnp5,1203 100 augustusGene,134 chainHg19,1073 chainNetHg19,1076 microsat,70 nestedRepeats,230 netHg19,1073 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainHg19,745 chainNetHg19,748 nestedRepeats,238 netHg19,745 1000-2000 augustusGene,161 1000000 transMapEnsemblV5,671 transMapEstV5,640 transMapRefSeqV5,640 transMapRnaV5,640 transMapV5,746 uniprot,1824 100000000 evaSnp4,1125 evaSnp5,1125 100k evaSnp4,153 evaSnp5,153 103-7 chainHg19,1106 chainNetHg19,1109 netHg19,1106 10607616 nestedRepeats,394 rmsk,417 10973072 nestedRepeats,361 rmsk,384 11 chainHg19,702 chainHg19,709 chainNetHg19,705 chainNetHg19,712 netHg19,702 netHg19,709 111 chainHg19,704 chainHg19,710 chainNetHg19,707 chainNetHg19,713 netHg19,704 netHg19,710 11484-9 chainHg19,1075 chainNetHg19,1078 netHg19,1075 115-26 chainHg19,1037 chainNetHg19,1040 netHg19,1037 11752248 ensGene,205 117900 chainHg19,726 chainHg19,738 chainNetHg19,729 chainNetHg19,741 netHg19,726 netHg19,738 118300 chainHg19,750 chainNetHg19,753 netHg19,750 11928468 chainHg19,1039 chainNetHg19,1042 netHg19,1039 11932250 est,812 intronEst,896 mrna,529 refGene,355 refSeqComposite,1742 xenoMrna,604 xenoRefGene,314 12 est,808 intronEst,892 mrna,525 refGene,351 refSeqComposite,1738 transMapEnsemblV5,748 transMapEnsemblV5,814 transMapEstV5,717 transMapEstV5,783 transMapRefSeqV5,717 transMapRefSeqV5,783 transMapRnaV5,717 transMapRnaV5,783 transMapV5,823 transMapV5,889 xenoMrna,600 xenoRefGene,310 12111 chainHg19,712 chainNetHg19,715 netHg19,712 125 gap,132 12529312 chainHg19,1108 chainNetHg19,1111 netHg19,1108 127-163 genscan,206 13 chainHg19,1104 chainNetHg19,1107 netHg19,1104 130 gold,152 1300 chainHg19,746 chainNetHg19,749 netHg19,746 134-41 windowmaskerSdust,112 1430-2 evaSnp4,1249 evaSnp5,1249 14500911 chainHg19,1077 chainNetHg19,1080 netHg19,1077 14534192 augustusGene,340 14681350 est,794 intronEst,878 mrna,511 xenoMrna,586 15 microsat,30 microsat,79 microsat,130 refGene,273 refSeqComposite,1241 simpleRepeat,90 windowmaskerSdust,109 xenoRefGene,233 15108278 uniprot,2051 152111 chainHg19,715 chainNetHg19,718 netHg19,715 15608248 refGene,431 refSeqComposite,1818 xenoRefGene,390 16 animalQtl,315 nestedRepeats,357 rmsk,380 16261421 animalQtl,319 16287941 windowmaskerSdust,114 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 transMapEnsemblV5,747 transMapEstV5,716 transMapRefSeqV5,716 transMapRnaV5,716 transMapV5,822 17245610 animalQtl,434 1763-73 transMapEnsemblV5,749 transMapEstV5,718 transMapRefSeqV5,718 transMapRnaV5,718 transMapV5,824 17989246 transMapEnsemblV5,751 transMapEstV5,720 transMapRefSeqV5,720 transMapRnaV5,720 transMapV5,826 18 animalQtl,430 18085818 transMapEnsemblV5,817 transMapEstV5,786 transMapRefSeqV5,786 transMapRnaV5,786 transMapV5,892 18218656 augustusGene,315 transMapEnsemblV5,783 transMapEstV5,752 transMapRefSeqV5,752 transMapRnaV5,752 transMapV5,858 19 augustusGene,335 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 genscan,149 genscan,223 1998 genscan,167 genscan,204 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainHg19,419 chainHg19,424 chainHg19,707 chainNetHg19,422 chainNetHg19,427 chainNetHg19,710 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netHg19,419 netHg19,424 netHg19,707 simpleRepeat,92 uniprot,1121 uniprot,1331 windowmaskerSdust,111 2-3 uniprot,1572 20 chainHg19,1074 chainNetHg19,1077 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netHg19,1074 transMapEnsemblV5,374 transMapEstV5,343 transMapRefSeqV5,343 transMapRnaV5,343 transMapV5,449 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2002 chainHg19,1036 chainNetHg19,1039 ensGene,47 ensGene,198 est,806 intronEst,890 mrna,523 netHg19,1036 refGene,349 refSeqComposite,1736 xenoMrna,598 xenoRefGene,308 2003 augustusGene,333 chainHg19,1070 chainHg19,1102 chainNetHg19,1073 chainNetHg19,1105 netHg19,1070 netHg19,1102 2004 animalQtl,91 est,786 intronEst,870 mrna,503 uniprot,2045 xenoMrna,578 2005 animalQtl,313 refGene,423 refSeqComposite,1810 xenoRefGene,382 2006 animalQtl,95 animalQtl,99 windowmaskerSdust,107 2007 animalQtl,428 chainHg19,1009 chainNetHg19,1012 netHg19,1009 transMapEnsemblV5,745 transMapEnsemblV5,811 transMapEstV5,714 transMapEstV5,780 transMapRefSeqV5,714 transMapRefSeqV5,780 transMapRnaV5,714 transMapRnaV5,780 transMapV5,820 transMapV5,886 2008 animalQtl,103 augustusGene,308 transMapEnsemblV5,776 transMapEstV5,745 transMapRefSeqV5,745 transMapRnaV5,745 transMapV5,851 2009 chainHg19,5 chainHg19,67 chainHg19,301 chainNetHg19,6 chainNetHg19,70 chainNetHg19,304 chainNetHg19Viewchain,4 chainNetHg19Viewnet,4 netHg19,5 netHg19,67 netHg19,301 2010 animalQtl,329 animalQtl,363 2012 gap,16 gold,18 uniprot,2000 2013 animalQtl,392 est,761 intronEst,845 mrna,478 xenoMrna,553 2014 animalQtl,107 refGene,390 refSeqComposite,1777 xenoRefGene,349 2016 evaSnp4,850 evaSnp4,1244 evaSnp5,850 evaSnp5,1244 2021 evaSnp4,1198 evaSnp5,1198 2022-11-21 evaSnp4,689 2022_03 uniprot,1911 2023 uniprot,1191 2023-9-7 evaSnp5,689 2111 chainHg19,711 chainNetHg19,714 netHg19,711 217900 chainHg19,727 chainHg19,739 chainNetHg19,730 chainNetHg19,742 netHg19,727 netHg19,739 218300 chainHg19,751 chainNetHg19,754 netHg19,751 22 windowmaskerSdust,110 22102590 uniprot,2007 225 transMapEnsemblV5,716 transMapEstV5,685 transMapRefSeqV5,685 transMapRnaV5,685 transMapV5,791 22900 chainHg19,724 chainHg19,736 chainNetHg19,727 chainNetHg19,739 netHg19,724 netHg19,736 23 uniprot,2047 23180796 animalQtl,399 23193287 est,768 intronEst,852 mrna,485 xenoMrna,560 23300 chainHg19,748 chainNetHg19,751 netHg19,748 24 augustusGene,311 gap,137 transMapEnsemblV5,779 transMapEstV5,748 transMapRefSeqV5,748 transMapRnaV5,748 transMapV5,854 24259432 refGene,397 refSeqComposite,1784 xenoRefGene,356 25 genscan,225 transMapV5,112 xenoMrna,503 xenoRefGene,268 250k evaSnp4,165 evaSnp5,165 252111 chainHg19,716 chainNetHg19,719 netHg19,716 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 26740527 evaSnp4,1251 evaSnp5,1251 268 genscan,226 27 microsat,131 simpleRepeat,91 28 evaSnp4,1200 evaSnp5,1200 2900 chainHg19,723 chainHg19,735 chainNetHg19,726 chainNetHg19,738 netHg19,723 netHg19,735 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 chainHg19,431 chainHg19,708 chainNetHg19,434 chainNetHg19,711 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 est,478 est,531 est,585 intronEst,112 intronEst,559 intronEst,612 intronEst,666 microsat,68 netHg19,431 netHg19,708 transMapEnsemblV5,813 transMapEstV5,782 transMapRefSeqV5,782 transMapRnaV5,782 transMapV5,888 uniprot,1123 uniprot,1194 xenoMrna,88 3.1 augustusGene,24 30 chainHg19,1072 chainNetHg19,1075 ensGene,201 netHg19,1072 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainHg19,680 chainNetHg19,683 netHg19,680 317900 chainHg19,728 chainHg19,740 chainNetHg19,731 chainNetHg19,743 netHg19,728 netHg19,740 318300 chainHg19,752 chainNetHg19,755 netHg19,752 32 est,789 evaSnp4,1247 evaSnp5,1247 intronEst,82 intronEst,873 mrna,506 xenoMrna,581 32111 chainHg19,713 chainNetHg19,716 netHg19,713 33 refGene,426 refSeqComposite,1813 xenoRefGene,385 3300 chainHg19,747 chainNetHg19,750 netHg19,747 34718739 evaSnp4,1211 evaSnp5,1211 34990190 refSeqComposite,1555 350 chainHg19,718 chainHg19,730 chainNetHg19,721 chainNetHg19,733 netHg19,718 netHg19,730 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 36727467 refSeqComposite,1557 38-41 ensGene,203 39s ensGene,163 3_prime_utr_variant evaSnp4,790 evaSnp5,790 4 est,809 evaSnp4,4 evaSnp4,13 evaSnp4,39 evaSnp4,688 evaSnp4,949 evaSnp4,1138 intronEst,893 mrna,526 refGene,352 refSeqComposite,1739 xenoMrna,601 xenoRefGene,311 40 uniprot,2002 400 transMapV5,108 41 animalQtl,394 est,763 intronEst,847 mrna,480 xenoMrna,555 418-420 nestedRepeats,359 rmsk,382 42 refGene,392 refSeqComposite,1779 xenoRefGene,351 425 chainHg19,719 chainHg19,731 chainNetHg19,722 chainNetHg19,734 netHg19,719 netHg19,731 45 refSeqComposite,941 450 chainHg19,720 chainHg19,732 chainNetHg19,723 chainNetHg19,735 netHg19,720 netHg19,732 464-70 uniprot,2049 5 augustusGene,312 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 est,475 est,516 est,542 evaSnp5,4 evaSnp5,13 evaSnp5,39 evaSnp5,688 evaSnp5,949 evaSnp5,1138 intronEst,556 intronEst,597 intronEst,623 transMapEnsemblV5,9 transMapEnsemblV5,780 transMapEstV5,7 transMapEstV5,749 transMapRefSeqV5,8 transMapRefSeqV5,749 transMapRnaV5,8 transMapRnaV5,749 transMapV5,6 transMapV5,855 uniprot,2048 xenoMrna,86 5-base gc5BaseBw,6 gc5BaseBw,27 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 est,32 intronEst,44 573-80 microsat,133 simpleRepeat,93 57900 chainHg19,725 chainHg19,737 chainNetHg19,728 chainNetHg19,740 netHg19,725 netHg19,737 582 gap,138 58300 chainHg19,749 chainNetHg19,752 netHg19,749 5_prime_utr_variant evaSnp4,789 evaSnp5,789 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 600 chainHg19,721 chainHg19,733 chainNetHg19,724 chainNetHg19,736 netHg19,721 netHg19,733 637-44 augustusGene,313 transMapEnsemblV5,781 transMapEstV5,750 transMapRefSeqV5,750 transMapRnaV5,750 transMapV5,856 656-64 est,810 intronEst,894 mrna,527 refGene,353 refSeqComposite,1740 xenoMrna,602 xenoRefGene,312 657-63 nestedRepeats,392 rmsk,415 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 72111 chainHg19,714 chainNetHg19,717 netHg19,714 743-8 nestedRepeats,414 rmsk,437 750 chainHg19,742 chainNetHg19,745 est,664 intronEst,745 netHg19,742 764 gold,153 78-94 genscan,228 792-800 animalQtl,317 825 chainHg19,743 chainNetHg19,746 netHg19,743 850 chainHg19,744 chainNetHg19,747 netHg19,744 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 evaSnp4,1248 evaSnp5,1248 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainHg19,722 chainHg19,734 chainNetHg19,725 chainNetHg19,737 netHg19,722 netHg19,734 9149143 genscan,230 93 uniprot,1483 96 est,712 intronEst,793 mrna,428 refGene,308 refSeqComposite,1276 9862982 microsat,135 simpleRepeat,95 9th animalQtl,350 _alt uniprot,1419 _fix uniprot,1421 a animalQtl,82 animalQtl,189 animalQtl,231 animalQtl,302 animalQtl,331 animalQtl,409 animalQtl,411 augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainHg19,75 chainHg19,144 chainHg19,196 chainHg19,451 chainHg19,461 chainHg19,465 chainHg19,532 chainHg19,549 chainHg19,552 chainHg19,618 chainHg19,623 chainHg19,628 chainHg19,632 chainHg19,643 chainHg19,675 chainHg19,794 chainHg19,808 chainHg19,814 chainHg19,820 chainHg19,824 chainHg19,827 chainHg19,855 chainHg19,1045 chainHg19,1069 chainHg19,1085 chainNetHg19,78 chainNetHg19,147 chainNetHg19,199 chainNetHg19,454 chainNetHg19,464 chainNetHg19,468 chainNetHg19,535 chainNetHg19,552 chainNetHg19,555 chainNetHg19,621 chainNetHg19,626 chainNetHg19,631 chainNetHg19,635 chainNetHg19,646 chainNetHg19,678 chainNetHg19,797 chainNetHg19,811 chainNetHg19,817 chainNetHg19,823 chainNetHg19,827 chainNetHg19,830 chainNetHg19,858 chainNetHg19,1048 chainNetHg19,1072 chainNetHg19,1088 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 ensGene,31 est,115 est,132 est,167 est,193 est,266 est,385 est,465 est,469 est,595 est,621 est,629 est,681 est,700 evaSnp4,103 evaSnp4,120 evaSnp4,130 evaSnp4,207 evaSnp4,217 evaSnp4,349 evaSnp4,487 evaSnp4,531 evaSnp4,535 evaSnp4,539 evaSnp4,581 evaSnp4,588 evaSnp4,655 evaSnp4,661 evaSnp4,896 evaSnp4,1037 evaSnp4,1081 evaSnp4,1109 evaSnp4,1173 evaSnp4,1186 evaSnp5,103 evaSnp5,120 evaSnp5,130 evaSnp5,207 evaSnp5,217 evaSnp5,349 evaSnp5,487 evaSnp5,531 evaSnp5,535 evaSnp5,539 evaSnp5,581 evaSnp5,588 evaSnp5,655 evaSnp5,661 evaSnp5,896 evaSnp5,1037 evaSnp5,1081 evaSnp5,1109 evaSnp5,1173 evaSnp5,1186 gap,99 gap,103 gc5BaseBw,44 genscan,102 genscan,132 gold,117 gold,123 intronEst,115 intronEst,148 intronEst,196 intronEst,213 intronEst,248 intronEst,274 intronEst,347 intronEst,466 intronEst,546 intronEst,550 intronEst,676 intronEst,702 intronEst,710 intronEst,762 intronEst,781 microsat,53 microsat,119 mrna,61 mrna,78 mrna,113 mrna,139 mrna,212 mrna,331 mrna,397 mrna,416 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netHg19,75 netHg19,144 netHg19,196 netHg19,451 netHg19,461 netHg19,465 netHg19,532 netHg19,549 netHg19,552 netHg19,618 netHg19,623 netHg19,628 netHg19,632 netHg19,643 netHg19,675 netHg19,794 netHg19,808 netHg19,814 netHg19,820 netHg19,824 netHg19,827 netHg19,855 netHg19,1045 netHg19,1069 netHg19,1085 refGene,277 refGene,296 refGene,367 refGene,410 refSeqComposite,147 refSeqComposite,158 refSeqComposite,295 refSeqComposite,310 refSeqComposite,529 refSeqComposite,642 refSeqComposite,790 refSeqComposite,1052 refSeqComposite,1245 refSeqComposite,1264 refSeqComposite,1517 refSeqComposite,1536 refSeqComposite,1562 refSeqComposite,1651 refSeqComposite,1754 refSeqComposite,1797 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 transMapEnsemblV5,83 transMapEnsemblV5,115 transMapEnsemblV5,205 transMapEnsemblV5,318 transMapEnsemblV5,353 transMapEnsemblV5,397 transMapEnsemblV5,423 transMapEnsemblV5,476 transMapEnsemblV5,546 transMapEnsemblV5,625 transMapEnsemblV5,653 transMapEnsemblV5,712 transMapEstV5,52 transMapEstV5,84 transMapEstV5,174 transMapEstV5,287 transMapEstV5,322 transMapEstV5,366 transMapEstV5,392 transMapEstV5,445 transMapEstV5,515 transMapEstV5,594 transMapEstV5,622 transMapEstV5,681 transMapRefSeqV5,52 transMapRefSeqV5,84 transMapRefSeqV5,174 transMapRefSeqV5,287 transMapRefSeqV5,322 transMapRefSeqV5,366 transMapRefSeqV5,392 transMapRefSeqV5,445 transMapRefSeqV5,515 transMapRefSeqV5,594 transMapRefSeqV5,622 transMapRefSeqV5,681 transMapRnaV5,52 transMapRnaV5,84 transMapRnaV5,174 transMapRnaV5,287 transMapRnaV5,322 transMapRnaV5,366 transMapRnaV5,392 transMapRnaV5,445 transMapRnaV5,515 transMapRnaV5,594 transMapRnaV5,622 transMapRnaV5,681 transMapV5,53 transMapV5,190 transMapV5,280 transMapV5,393 transMapV5,428 transMapV5,472 transMapV5,498 transMapV5,551 transMapV5,621 transMapV5,700 transMapV5,728 transMapV5,787 uniprot,140 uniprot,311 uniprot,418 uniprot,459 uniprot,480 uniprot,490 uniprot,523 uniprot,603 uniprot,622 uniprot,708 uniprot,740 uniprot,759 uniprot,805 uniprot,965 uniprot,976 uniprot,988 uniprot,1001 uniprot,1048 uniprot,1071 uniprot,1152 uniprot,1164 uniprot,1179 uniprot,1217 uniprot,1226 uniprot,1234 uniprot,1239 uniprot,1286 uniprot,1458 uniprot,1599 uniprot,1634 uniprot,1735 uniprot,1779 uniprot,1807 uniprot,1922 uniprot,1949 uniprot,2017 uniprot,2023 uniprot,2032 windowmaskerSdust,91 xenoMrna,107 xenoMrna,136 xenoMrna,153 xenoMrna,188 xenoMrna,214 xenoMrna,287 xenoMrna,406 xenoMrna,471 xenoMrna,491 xenoRefGene,237 xenoRefGene,256 xenoRefGene,326 xenoRefGene,369 a91-114-31-123 chainHg19,668 chainNetHg19,671 netHg19,668 aa evaSnp4,368 evaSnp4,649 evaSnp5,368 evaSnp5,649 unipModif,1 windowmaskerSdust,97 aachange evaSnp4,320 evaSnp5,320 ab augustusGene,3 augustusGene,16 abbreviated chainHg19,581 chainNetHg19,584 netHg19,581 about chainHg19,457 chainHg19,470 chainHg19,844 chainNetHg19,460 chainNetHg19,473 chainNetHg19,847 est,31 est,411 evaSnp4,221 evaSnp4,969 evaSnp5,221 evaSnp5,969 gap,35 genscan,127 gold,37 intronEst,43 intronEst,492 microsat,98 mrna,348 netHg19,457 netHg19,470 netHg19,844 refGene,216 refSeqComposite,95 refSeqComposite,850 refSeqComposite,1185 refSeqComposite,1380 refSeqComposite,1459 simpleRepeat,59 transMapEnsemblV5,132 transMapEstV5,101 transMapRefSeqV5,101 transMapRnaV5,101 transMapV5,207 xenoMrna,423 xenoRefGene,176 above chainHg19,529 chainHg19,541 chainHg19,561 chainNetHg19,532 chainNetHg19,544 chainNetHg19,564 nestedRepeats,218 netHg19,529 netHg19,541 netHg19,561 uniprot,1525 abundance chainHg19,178 chainNetHg19,181 netHg19,178 acaaaaac evaSnp4,631 evaSnp5,631 acad chainHg19,1065 chainNetHg19,1068 netHg19,1065 acc ucscToRefSeq,2 acceptor genscan,32 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 ensGene,56 ensGene,100 evaSnp4,952 evaSnp4,1022 evaSnp5,952 evaSnp5,1022 refSeqComposite,1286 refSeqComposite,1350 refSeqComposite,1440 refSeqComposite,1649 transMapEnsemblV5,516 transMapEnsemblV5,575 transMapEstV5,485 transMapEstV5,544 transMapRefSeqV5,485 transMapRefSeqV5,544 transMapRnaV5,485 transMapRnaV5,544 transMapV5,591 transMapV5,650 uniprot,896 uniprot,1706 uniprot,1838 accessed refSeqComposite,1295 refSeqComposite,1318 transMapEnsemblV5,525 transMapEstV5,494 transMapRefSeqV5,494 transMapRnaV5,494 transMapV5,600 accesses refSeqComposite,1623 accessing refSeqComposite,1381 transMapEnsemblV5,568 transMapEstV5,537 transMapRefSeqV5,537 transMapRnaV5,537 transMapV5,643 accession refGene,156 refGene,168 refSeqComposite,777 refSeqComposite,802 ucscToRefSeq,4 ucscToRefSeq,18 xenoRefGene,116 xenoRefGene,128 accession.version-srcuniq.destuniq transMapEnsemblV5,419 transMapEstV5,388 transMapRefSeqV5,388 transMapRnaV5,388 transMapV5,494 accessions refSeqComposite,221 refSeqComposite,350 refSeqComposite,492 transMapEnsemblV5,391 transMapEstV5,360 transMapRefSeqV5,360 transMapRnaV5,360 transMapV5,466 accomplished evaSnp4,186 evaSnp5,186 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 evaSnp4,312 evaSnp4,421 evaSnp4,430 evaSnp4,749 evaSnp5,312 evaSnp5,421 evaSnp5,430 evaSnp5,749 nestedRepeats,183 acgt chainHg19,667 chainNetHg19,670 netHg19,667 acid evaSnp4,248 evaSnp4,331 evaSnp4,891 evaSnp5,248 evaSnp5,331 evaSnp5,891 unipModif,5 unipMut,4 uniprot,339 uniprot,351 acids animalQtl,390 ensGene,196 est,759 est,784 evaSnp4,871 evaSnp4,1196 evaSnp5,871 evaSnp5,1196 intronEst,843 intronEst,868 microsat,126 mrna,476 mrna,501 refGene,388 refGene,421 refSeqComposite,1775 refSeqComposite,1808 simpleRepeat,86 uniprot,620 uniprot,1998 xenoMrna,551 xenoMrna,576 xenoRefGene,347 xenoRefGene,380 acronym uniprot,546 added animalQtl,89 animalQtl,93 animalQtl,97 animalQtl,101 animalQtl,105 chainHg19,591 chainNetHg19,594 nestedRepeats,147 netHg19,591 transMapEnsemblV5,425 transMapEnsemblV5,435 transMapEstV5,394 transMapEstV5,404 transMapRefSeqV5,394 transMapRefSeqV5,404 transMapRnaV5,394 transMapRnaV5,404 transMapV5,500 transMapV5,510 uniprot,1187 additional evaSnp4,516 evaSnp4,566 evaSnp5,516 evaSnp5,566 nestedRepeats,288 rmsk,295 additions refGene,59 refSeqComposite,118 adjust refSeqComposite,740 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 uniprot,1917 advice chainHg19,930 chainHg19,962 chainNetHg19,933 chainNetHg19,965 netHg19,930 netHg19,962 advise refSeqComposite,77 af evaSnp4,1175 evaSnp5,1175 nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainHg19,85 chainNetHg19,88 netHg19,85 after chainHg19,902 chainNetHg19,905 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netHg19,902 uniprot,294 uniprot,1329 ag intronEst,89 again transMapEnsemblV5,407 transMapEstV5,376 transMapRefSeqV5,376 transMapRnaV5,376 transMapV5,482 uniprot,629 uniprot,1500 against est,649 intronEst,35 intronEst,730 mrna,341 mrna,389 refGene,260 refSeqComposite,1228 transMapEnsemblV5,125 transMapEstV5,94 transMapRefSeqV5,94 transMapRnaV5,94 transMapV5,200 xenoMrna,416 xenoMrna,463 xenoRefGene,220 agarwala windowmaskerSdust,98 agp gap,49 gap,58 gap,65 gold,48 gold,57 gold,64 ahead evaSnp4,1207 evaSnp5,1207 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 ensGene,46 ensGene,189 evaSnp4,849 evaSnp4,1181 evaSnp5,849 evaSnp5,1181 refGene,379 refSeqComposite,1766 transMapEnsemblV5,733 transMapEstV5,702 transMapRefSeqV5,702 transMapRnaV5,702 transMapV5,808 xenoRefGene,338 alejo uniprot,1966 algorithm augustusGene,130 transMapEnsemblV5,28 transMapEstV5,26 transMapRefSeqV5,26 transMapRnaV5,26 transMapV5,25 algorithms uniprot,52 align animalQtl,65 chainHg19,194 chainNetHg19,197 est,679 intronEst,760 netHg19,194 uniprot,1216 alignable chainHg19,22 chainHg19,38 chainNetHg19,25 chainNetHg19,41 netHg19,22 netHg19,38 aligned chainHg19,584 chainNetHg19,587 est,648 est,684 intronEst,34 intronEst,152 intronEst,729 intronEst,765 mrna,388 mrna,400 netHg19,584 refGene,259 refGene,280 refSeqComposite,80 refSeqComposite,189 refSeqComposite,304 refSeqComposite,894 refSeqComposite,1057 refSeqComposite,1227 refSeqComposite,1248 transMapV5,116 uniprot,783 uniprot,973 uniprot,1007 uniprot,1246 uniprot,1335 uniprot,1472 xenoMrna,462 xenoMrna,474 xenoRefGene,219 xenoRefGene,240 aligning chainHg19,133 chainHg19,329 chainHg19,359 chainNetHg19,136 chainNetHg19,332 chainNetHg19,362 est,397 intronEst,478 netHg19,133 netHg19,329 netHg19,359 uniprot,952 alignment chainHg19,257 chainHg19,1012 chainNetHg19,260 chainNetHg19,1015 est,55 est,420 est,426 est,438 est,689 est,802 intronEst,76 intronEst,139 intronEst,501 intronEst,507 intronEst,519 intronEst,770 intronEst,886 mrna,36 mrna,359 mrna,365 mrna,377 mrna,405 mrna,519 netHg19,8 netHg19,257 netHg19,1012 refGene,269 refGene,285 refGene,345 refSeqComposite,193 refSeqComposite,327 refSeqComposite,458 refSeqComposite,1146 refSeqComposite,1237 refSeqComposite,1253 refSeqComposite,1732 transMapEnsemblV5,27 transMapEnsemblV5,79 transMapEnsemblV5,103 transMapEnsemblV5,140 transMapEnsemblV5,196 transMapEnsemblV5,209 transMapEnsemblV5,387 transMapEnsemblV5,430 transMapEstV5,25 transMapEstV5,48 transMapEstV5,72 transMapEstV5,109 transMapEstV5,165 transMapEstV5,178 transMapEstV5,356 transMapEstV5,399 transMapRefSeqV5,25 transMapRefSeqV5,48 transMapRefSeqV5,72 transMapRefSeqV5,109 transMapRefSeqV5,165 transMapRefSeqV5,178 transMapRefSeqV5,356 transMapRefSeqV5,399 transMapRnaV5,25 transMapRnaV5,48 transMapRnaV5,72 transMapRnaV5,109 transMapRnaV5,165 transMapRnaV5,178 transMapRnaV5,356 transMapRnaV5,399 transMapV5,24 transMapV5,49 transMapV5,178 transMapV5,215 transMapV5,271 transMapV5,284 transMapV5,462 transMapV5,505 unipAliSwissprot,4 unipAliTrembl,4 uniprot,108 uniprot,135 uniprot,191 uniprot,807 uniprot,914 uniprot,1175 uniprot,1429 uniprot,1523 uniprot,1620 uniprot,1629 uniprot,1636 uniprot,1642 uniprot,1704 uniprot,1862 xenoMrna,41 xenoMrna,434 xenoMrna,440 xenoMrna,452 xenoMrna,479 xenoMrna,594 xenoRefGene,229 xenoRefGene,245 xenoRefGene,304 alignments augustusGene,300 chainHg19,9 chainHg19,63 chainHg19,444 chainHg19,596 chainHg19,608 chainHg19,616 chainHg19,642 chainHg19,760 chainHg19,1032 chainHg19,1097 chainNetHg19,12 chainNetHg19,66 chainNetHg19,447 chainNetHg19,599 chainNetHg19,611 chainNetHg19,619 chainNetHg19,645 chainNetHg19,763 chainNetHg19,1035 chainNetHg19,1100 chainNetHg19Viewchain,10 chainNetHg19Viewnet,10 est,14 est,698 evaSnp4,860 evaSnp5,860 intronEst,16 intronEst,779 mrna,15 mrna,414 ncbiRefSeqPsl,2 ncbiRefSeqPsl,4 netHg19,63 netHg19,444 netHg19,596 netHg19,608 netHg19,616 netHg19,642 netHg19,760 netHg19,1032 netHg19,1097 refGene,294 refSeqComposite,267 refSeqComposite,366 refSeqComposite,433 refSeqComposite,435 refSeqComposite,1207 refSeqComposite,1262 refSeqComposite,1419 rmsk,306 transMapEnsemblV5,21 transMapEnsemblV5,72 transMapEnsemblV5,154 transMapEnsemblV5,167 transMapEnsemblV5,325 transMapEnsemblV5,337 transMapEnsemblV5,347 transMapEnsemblV5,370 transMapEnsemblV5,441 transMapEnsemblV5,453 transMapEnsemblV5,768 transMapEstV5,19 transMapEstV5,41 transMapEstV5,123 transMapEstV5,136 transMapEstV5,294 transMapEstV5,306 transMapEstV5,316 transMapEstV5,339 transMapEstV5,410 transMapEstV5,422 transMapEstV5,737 transMapRefSeqV5,19 transMapRefSeqV5,41 transMapRefSeqV5,123 transMapRefSeqV5,136 transMapRefSeqV5,294 transMapRefSeqV5,306 transMapRefSeqV5,316 transMapRefSeqV5,339 transMapRefSeqV5,410 transMapRefSeqV5,422 transMapRefSeqV5,737 transMapRnaV5,19 transMapRnaV5,41 transMapRnaV5,123 transMapRnaV5,136 transMapRnaV5,294 transMapRnaV5,306 transMapRnaV5,316 transMapRnaV5,339 transMapRnaV5,410 transMapRnaV5,422 transMapRnaV5,737 transMapV5,4 transMapV5,18 transMapV5,40 transMapV5,67 transMapV5,85 transMapV5,127 transMapV5,140 transMapV5,229 transMapV5,242 transMapV5,400 transMapV5,412 transMapV5,422 transMapV5,445 transMapV5,516 transMapV5,528 transMapV5,843 uniprot,82 uniprot,100 uniprot,637 uniprot,793 uniprot,814 uniprot,876 uniprot,1138 uniprot,1148 uniprot,1161 uniprot,1309 uniprot,1410 uniprot,1487 xenoMrna,16 xenoMrna,489 xenoRefGene,254 aligns transMapV5,162 all animalQtl,21 augustusGene,207 chainHg19,615 chainNetHg19,618 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 est,189 est,243 est,298 est,393 est,485 evaSnp4,342 evaSnp4,366 evaSnp4,384 evaSnp4,1193 evaSnp5,342 evaSnp5,366 evaSnp5,384 evaSnp5,1193 intronEst,118 intronEst,270 intronEst,324 intronEst,379 intronEst,474 intronEst,566 mrna,135 mrna,189 mrna,244 ncbiRefSeq,2 nestedRepeats,138 nestedRepeats,170 netHg19,615 refSeqComposite,33 refSeqComposite,84 refSeqComposite,177 refSeqComposite,182 refSeqComposite,198 refSeqComposite,200 refSeqComposite,214 refSeqComposite,344 refSeqComposite,380 refSeqComposite,585 refSeqComposite,788 refSeqComposite,1405 refSeqComposite,1569 refSeqComposite,1661 refSeqComposite,1666 rmsk,65 transMapEnsemblV5,190 transMapEstV5,159 transMapRefSeqV5,159 transMapRnaV5,159 transMapV5,265 uniprot,89 uniprot,121 uniprot,204 uniprot,395 uniprot,956 uniprot,1107 uniprot,1167 uniprot,1311 uniprot,1337 uniprot,1343 uniprot,1418 uniprot,1542 uniprot,1685 uniprot,1979 xenoMrna,210 xenoMrna,264 xenoMrna,319 allele evaSnp4,498 evaSnp4,527 evaSnp4,577 evaSnp5,498 evaSnp5,527 evaSnp5,577 alleles evaSnp4,231 evaSnp4,612 evaSnp5,231 evaSnp5,612 allowed est,660 intronEst,741 allows augustusGene,168 chainHg19,80 chainNetHg19,83 est,388 intronEst,469 mrna,334 netHg19,80 refGene,187 refSeqComposite,821 transMapEnsemblV5,118 transMapEnsemblV5,287 transMapEstV5,87 transMapEstV5,256 transMapRefSeqV5,87 transMapRefSeqV5,256 transMapRnaV5,87 transMapRnaV5,256 transMapV5,193 transMapV5,362 xenoMrna,409 xenoRefGene,147 aln unipAliSwissprot,2 unipAliTrembl,2 alone augustusGene,33 along transMapEnsemblV5,181 transMapEstV5,150 transMapRefSeqV5,150 transMapRnaV5,150 transMapV5,256 alpha refSeqComposite,417 already chainHg19,805 chainNetHg19,808 netHg19,805 also chainHg19,91 chainNetHg19,94 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ensGene,48 est,270 est,378 est,429 est,598 evaSnp4,918 evaSnp4,1101 evaSnp5,918 evaSnp5,1101 gap,31 gold,33 intronEst,351 intronEst,459 intronEst,510 intronEst,679 mrna,216 mrna,324 mrna,368 netHg19,91 refSeqComposite,1125 refSeqComposite,1316 refSeqComposite,1349 refSeqComposite,1581 transMapEnsemblV5,108 transMapEnsemblV5,143 transMapEnsemblV5,645 transMapEstV5,77 transMapEstV5,112 transMapEstV5,614 transMapRefSeqV5,77 transMapRefSeqV5,112 transMapRefSeqV5,614 transMapRnaV5,77 transMapRnaV5,112 transMapRnaV5,614 transMapV5,183 transMapV5,218 transMapV5,720 uniprot,666 uniprot,706 uniprot,1799 xenoMrna,291 xenoMrna,399 xenoMrna,443 alt evaSnp4,529 evaSnp4,547 evaSnp4,579 evaSnp4,597 evaSnp4,611 evaSnp4,630 evaSnp4,650 evaSnp5,529 evaSnp5,547 evaSnp5,579 evaSnp5,597 evaSnp5,611 evaSnp5,630 evaSnp5,650 uniprot,850 alter est,126 intronEst,207 mrna,72 xenoMrna,147 alteration evaSnp4,653 evaSnp5,653 alternate evaSnp4,230 evaSnp4,497 evaSnp4,526 evaSnp4,576 evaSnp5,230 evaSnp5,497 evaSnp5,526 evaSnp5,576 alternating gold,89 alternative augustusGene,122 unipAliSwissprot,16 uniprot,163 uniprot,670 alternatives-from-sampling augustusGene,131 alus rmsk,160 always evaSnp4,867 evaSnp5,867 gold,120 uniprot,503 uniprot,960 uniprot,1411 uniprot,1579 xenoMrna,85 ambiguous refSeqComposite,986 amino evaSnp4,247 evaSnp4,330 evaSnp4,870 evaSnp4,890 evaSnp5,247 evaSnp5,330 evaSnp5,870 evaSnp5,890 unipModif,4 unipMut,3 uniprot,338 uniprot,350 uniprot,619 amino-acid evaSnp4,851 evaSnp5,851 amount rmsk,215 amsterdam genscan,201 an animalQtl,374 chainHg19,151 chainHg19,177 chainHg19,183 chainNetHg19,154 chainNetHg19,180 chainNetHg19,186 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 est,447 est,494 est,577 evaSnp4,181 evaSnp4,210 evaSnp4,303 evaSnp4,538 evaSnp4,585 evaSnp4,641 evaSnp5,181 evaSnp5,210 evaSnp5,303 evaSnp5,538 evaSnp5,585 evaSnp5,641 gc5BaseBw,65 intronEst,59 intronEst,528 intronEst,575 intronEst,658 nestedRepeats,196 nestedRepeats,347 netHg19,151 netHg19,177 netHg19,183 refGene,181 refGene,268 refGene,381 refSeqComposite,744 refSeqComposite,815 refSeqComposite,1236 refSeqComposite,1768 rmsk,370 uniprot,765 uniprot,899 uniprot,1203 uniprot,1467 uniprot,1568 xenoRefGene,141 xenoRefGene,228 xenoRefGene,340 analysis evaSnp4,1000 evaSnp4,1031 evaSnp5,1000 evaSnp5,1031 refSeqComposite,75 refSeqComposite,1454 transMapEnsemblV5,537 transMapEstV5,506 transMapRefSeqV5,506 transMapRnaV5,506 transMapV5,612 uniprot,1648 uniprot,1728 analyze microsat,122 simpleRepeat,82 and animalQtl,10 animalQtl,36 animalQtl,49 animalQtl,53 animalQtl,58 animalQtl,162 animalQtl,174 animalQtl,194 animalQtl,212 animalQtl,234 animalQtl,240 animalQtl,305 animalQtl,326 animalQtl,339 animalQtl,417 augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 chainHg19,97 chainHg19,111 chainHg19,225 chainHg19,233 chainHg19,247 chainHg19,285 chainHg19,307 chainHg19,433 chainHg19,587 chainHg19,622 chainHg19,630 chainHg19,771 chainHg19,849 chainHg19,881 chainHg19,892 chainHg19,901 chainHg19,926 chainHg19,941 chainHg19,966 chainHg19,972 chainHg19,978 chainHg19,985 chainHg19,991 chainHg19,1055 chainHg19,1060 chainNetHg19,10 chainNetHg19,100 chainNetHg19,114 chainNetHg19,228 chainNetHg19,236 chainNetHg19,250 chainNetHg19,288 chainNetHg19,310 chainNetHg19,436 chainNetHg19,590 chainNetHg19,625 chainNetHg19,633 chainNetHg19,774 chainNetHg19,852 chainNetHg19,884 chainNetHg19,895 chainNetHg19,904 chainNetHg19,929 chainNetHg19,944 chainNetHg19,969 chainNetHg19,975 chainNetHg19,981 chainNetHg19,988 chainNetHg19,994 chainNetHg19,1058 chainNetHg19,1063 chainNetHg19Viewchain,8 chainNetHg19Viewnet,8 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 cytoBandIdeo,8 ensGene,6 ensGene,128 est,8 est,23 est,45 est,85 est,129 est,290 est,454 est,468 est,476 est,604 est,709 evaSnp4,15 evaSnp4,26 evaSnp4,29 evaSnp4,56 evaSnp4,123 evaSnp4,177 evaSnp4,229 evaSnp4,252 evaSnp4,318 evaSnp4,451 evaSnp4,466 evaSnp4,524 evaSnp4,546 evaSnp4,574 evaSnp4,596 evaSnp4,610 evaSnp4,703 evaSnp4,731 evaSnp4,760 evaSnp4,794 evaSnp4,822 evaSnp4,884 evaSnp4,888 evaSnp4,924 evaSnp4,966 evaSnp4,1030 evaSnp4,1092 evaSnp4,1149 evaSnp4,1239 evaSnp5,15 evaSnp5,26 evaSnp5,29 evaSnp5,56 evaSnp5,123 evaSnp5,177 evaSnp5,229 evaSnp5,252 evaSnp5,318 evaSnp5,451 evaSnp5,466 evaSnp5,524 evaSnp5,546 evaSnp5,574 evaSnp5,596 evaSnp5,610 evaSnp5,703 evaSnp5,731 evaSnp5,760 evaSnp5,794 evaSnp5,822 evaSnp5,884 evaSnp5,888 evaSnp5,924 evaSnp5,966 evaSnp5,1030 evaSnp5,1092 evaSnp5,1149 evaSnp5,1239 gap,5 gap,80 gap,102 gc5BaseBw,9 gc5BaseBw,22 gc5BaseBw,74 genscan,7 genscan,30 genscan,40 genscan,46 genscan,63 genscan,83 genscan,97 genscan,108 genscan,119 genscan,138 genscan,147 gold,6 gold,91 gold,105 gold,111 intronEst,10 intronEst,25 intronEst,86 intronEst,129 intronEst,166 intronEst,210 intronEst,371 intronEst,535 intronEst,549 intronEst,557 intronEst,685 intronEst,790 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,8 mrna,21 mrna,26 mrna,75 mrna,236 mrna,355 mrna,425 ncbiRefSeq,7 ncbiRefSeq,16 ncbiRefSeqCurated,14 ncbiRefSeqGenomicDiff,8 ncbiRefSeqGenomicDiff,13 ncbiRefSeqOther,16 ncbiRefSeqPredicted,12 ncbiRefSeqPsl,8 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netHg19,97 netHg19,111 netHg19,225 netHg19,233 netHg19,247 netHg19,285 netHg19,307 netHg19,433 netHg19,587 netHg19,622 netHg19,630 netHg19,771 netHg19,849 netHg19,881 netHg19,892 netHg19,901 netHg19,926 netHg19,941 netHg19,966 netHg19,972 netHg19,978 netHg19,985 netHg19,991 netHg19,1055 netHg19,1060 refGene,9 refGene,12 refGene,24 refGene,50 refGene,60 refGene,83 refGene,117 refGene,167 refGene,192 refGene,225 refGene,238 refGene,305 refGene,332 refGene,418 refSeqComposite,8 refSeqComposite,21 refSeqComposite,71 refSeqComposite,109 refSeqComposite,119 refSeqComposite,142 refSeqComposite,191 refSeqComposite,202 refSeqComposite,230 refSeqComposite,256 refSeqComposite,264 refSeqComposite,272 refSeqComposite,300 refSeqComposite,364 refSeqComposite,466 refSeqComposite,490 refSeqComposite,571 refSeqComposite,590 refSeqComposite,653 refSeqComposite,663 refSeqComposite,703 refSeqComposite,715 refSeqComposite,801 refSeqComposite,826 refSeqComposite,859 refSeqComposite,879 refSeqComposite,911 refSeqComposite,953 refSeqComposite,969 refSeqComposite,992 refSeqComposite,1007 refSeqComposite,1124 refSeqComposite,1143 refSeqComposite,1169 refSeqComposite,1174 refSeqComposite,1273 refSeqComposite,1368 refSeqComposite,1470 refSeqComposite,1488 refSeqComposite,1628 refSeqComposite,1669 refSeqComposite,1719 refSeqComposite,1805 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 transMapEnsemblV5,5 transMapEnsemblV5,11 transMapEnsemblV5,43 transMapEnsemblV5,93 transMapEnsemblV5,173 transMapEnsemblV5,198 transMapEnsemblV5,363 transMapEnsemblV5,365 transMapEnsemblV5,389 transMapEnsemblV5,406 transMapEnsemblV5,432 transMapEnsemblV5,463 transMapEnsemblV5,479 transMapEnsemblV5,494 transMapEnsemblV5,551 transMapEnsemblV5,636 transMapEnsemblV5,685 transMapEnsemblV5,699 transMapEnsemblV5,706 transMapEnsemblV5,764 transMapEstV5,9 transMapEstV5,62 transMapEstV5,142 transMapEstV5,167 transMapEstV5,332 transMapEstV5,334 transMapEstV5,358 transMapEstV5,375 transMapEstV5,401 transMapEstV5,432 transMapEstV5,448 transMapEstV5,463 transMapEstV5,520 transMapEstV5,605 transMapEstV5,654 transMapEstV5,668 transMapEstV5,675 transMapEstV5,733 transMapRefSeqV5,10 transMapRefSeqV5,62 transMapRefSeqV5,142 transMapRefSeqV5,167 transMapRefSeqV5,332 transMapRefSeqV5,334 transMapRefSeqV5,358 transMapRefSeqV5,375 transMapRefSeqV5,401 transMapRefSeqV5,432 transMapRefSeqV5,448 transMapRefSeqV5,463 transMapRefSeqV5,520 transMapRefSeqV5,605 transMapRefSeqV5,654 transMapRefSeqV5,668 transMapRefSeqV5,675 transMapRefSeqV5,733 transMapRnaV5,10 transMapRnaV5,62 transMapRnaV5,142 transMapRnaV5,167 transMapRnaV5,332 transMapRnaV5,334 transMapRnaV5,358 transMapRnaV5,375 transMapRnaV5,401 transMapRnaV5,432 transMapRnaV5,448 transMapRnaV5,463 transMapRnaV5,520 transMapRnaV5,605 transMapRnaV5,654 transMapRnaV5,668 transMapRnaV5,675 transMapRnaV5,733 transMapV5,8 transMapV5,16 transMapV5,73 transMapV5,87 transMapV5,138 transMapV5,161 transMapV5,168 transMapV5,248 transMapV5,273 transMapV5,438 transMapV5,440 transMapV5,464 transMapV5,481 transMapV5,507 transMapV5,538 transMapV5,554 transMapV5,569 transMapV5,626 transMapV5,711 transMapV5,760 transMapV5,774 transMapV5,781 transMapV5,839 ucscToRefSeq,6 unipAliSwissprot,19 unipAliTrembl,11 unipChain,9 unipConflict,7 unipDisulfBond,7 unipDomain,5 unipInterest,7 unipLocCytopl,6 unipLocExtra,6 unipLocSignal,7 unipLocTransMemb,6 unipModif,8 unipMut,7 unipOther,7 unipRepeat,5 unipStruct,9 uniprot,8 uniprot,17 uniprot,174 uniprot,329 uniprot,345 uniprot,355 uniprot,369 uniprot,378 uniprot,403 uniprot,433 uniprot,439 uniprot,448 uniprot,488 uniprot,517 uniprot,568 uniprot,589 uniprot,611 uniprot,617 uniprot,702 uniprot,761 uniprot,796 uniprot,866 uniprot,926 uniprot,939 uniprot,1122 uniprot,1214 uniprot,1310 uniprot,1342 uniprot,1375 uniprot,1420 uniprot,1465 uniprot,1498 uniprot,1598 uniprot,1617 uniprot,1650 uniprot,1691 uniprot,1790 uniprot,1898 uniprot,1958 uniprot,1970 uniprot,2028 uniprot,2036 windowmaskerSdust,10 xenoMrna,8 xenoMrna,19 xenoMrna,31 xenoMrna,150 xenoMrna,311 xenoMrna,430 xenoMrna,500 xenoRefGene,7 xenoRefGene,16 xenoRefGene,43 xenoRefGene,77 xenoRefGene,127 xenoRefGene,152 xenoRefGene,185 xenoRefGene,198 xenoRefGene,265 xenoRefGene,292 xenoRefGene,377 animal animalQtl,14 animalQtl,44 animalQtl,86 animalQtl,116 animalQtl,372 animalQtl,380 animalQtl,406 animalqtldb animalQtl,8 animals animalQtl,80 annot unipOther,2 annotated animalQtl,76 refSeqComposite,554 rmsk,67 uniprot,736 uniprot,994 uniprot,1014 uniprot,1027 uniprot,1034 uniprot,1040 uniprot,1053 uniprot,1082 uniprot,1233 uniprot,1265 annotation chainHg19,296 chainNetHg19,299 ensGene,165 evaSnp4,262 evaSnp4,316 evaSnp4,434 evaSnp4,710 evaSnp4,845 evaSnp4,1033 evaSnp4,1062 evaSnp4,1147 evaSnp4,1241 evaSnp5,262 evaSnp5,316 evaSnp5,434 evaSnp5,710 evaSnp5,845 evaSnp5,1033 evaSnp5,1062 evaSnp5,1147 evaSnp5,1241 netHg19,296 refSeqComposite,66 refSeqComposite,664 refSeqComposite,1113 refSeqComposite,1142 refSeqComposite,1188 rmsk,38 transMapEnsemblV5,606 transMapEstV5,575 transMapRefSeqV5,575 transMapRnaV5,575 transMapV5,681 uniprot,143 uniprot,466 uniprot,487 uniprot,530 uniprot,605 uniprot,624 uniprot,1731 annotationonprotein uniprot,1929 annotations ensGene,156 evaSnp4,828 evaSnp5,828 genscan,120 ncbiRefSeqOther,6 nestedRepeats,71 refGene,4 refGene,226 refSeqComposite,190 refSeqComposite,196 refSeqComposite,204 refSeqComposite,219 refSeqComposite,348 refSeqComposite,382 refSeqComposite,480 refSeqComposite,860 refSeqComposite,1466 refSeqComposite,1498 refSeqComposite,1534 transMapEnsemblV5,60 transMapEnsemblV5,539 transMapEnsemblV5,700 transMapEnsemblV5,708 transMapEstV5,508 transMapEstV5,669 transMapEstV5,677 transMapRefSeqV5,508 transMapRefSeqV5,669 transMapRefSeqV5,677 transMapRnaV5,508 transMapRnaV5,669 transMapRnaV5,677 transMapV5,75 transMapV5,614 transMapV5,775 transMapV5,783 unipOther,5 unipStruct,7 uniprot,6 uniprot,18 uniprot,54 uniprot,96 uniprot,128 uniprot,171 uniprot,212 uniprot,363 uniprot,394 uniprot,397 uniprot,455 uniprot,501 uniprot,595 uniprot,631 uniprot,662 uniprot,704 uniprot,718 uniprot,763 uniprot,1438 uniprot,1504 uniprot,1514 uniprot,1757 xenoRefGene,186 another evaSnp4,496 evaSnp4,664 evaSnp5,496 evaSnp5,664 refSeqComposite,326 transMapV5,80 any est,313 est,547 evaSnp4,251 evaSnp5,251 intronEst,394 intronEst,628 mrna,259 refSeqComposite,273 refSeqComposite,1351 uniprot,660 uniprot,1146 uniprot,1250 xenoMrna,334 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 ensGene,109 evaSnp4,1009 evaSnp5,1009 refSeqComposite,1307 refSeqComposite,1361 transMapEnsemblV5,563 transMapEstV5,532 transMapRefSeqV5,532 transMapRnaV5,532 transMapV5,638 apos animalQtl,172 animalQtl,258 appear evaSnp4,373 evaSnp5,373 appending transMapEnsemblV5,396 transMapEstV5,365 transMapRefSeqV5,365 transMapRnaV5,365 transMapV5,471 applied animalQtl,355 apply est,185 intronEst,266 mrna,131 xenoMrna,206 approach uniprot,1531 appropriate refGene,150 refSeqComposite,771 xenoRefGene,110 apr est,807 genscan,224 intronEst,891 mrna,524 refGene,350 refSeqComposite,1737 xenoMrna,599 xenoRefGene,309 apsects gc5BaseBw,51 arbitrary refSeqComposite,937 archive ensGene,142 evaSnp4,11 evaSnp4,36 evaSnp4,685 evaSnp4,1136 evaSnp4,1185 evaSnp5,11 evaSnp5,36 evaSnp5,685 evaSnp5,1136 evaSnp5,1185 refSeqComposite,1703 uniprot,893 uniprot,1670 uniprot,1908 archives evaSnp4,1016 evaSnp5,1016 refSeqComposite,1342 refSeqComposite,1687 uniprot,1832 are animalQtl,61 animalQtl,81 animalQtl,167 augustusGene,27 chainHg19,21 chainHg19,40 chainHg19,53 chainHg19,140 chainHg19,208 chainHg19,219 chainHg19,318 chainHg19,387 chainHg19,408 chainHg19,415 chainHg19,498 chainHg19,687 chainNetHg19,24 chainNetHg19,43 chainNetHg19,56 chainNetHg19,143 chainNetHg19,211 chainNetHg19,222 chainNetHg19,321 chainNetHg19,390 chainNetHg19,411 chainNetHg19,418 chainNetHg19,501 chainNetHg19,690 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ensGene,81 ensGene,121 est,27 est,64 est,146 est,156 evaSnp4,62 evaSnp4,100 evaSnp4,114 evaSnp4,127 evaSnp4,150 evaSnp4,419 evaSnp4,473 evaSnp4,613 evaSnp4,856 evaSnp5,62 evaSnp5,100 evaSnp5,114 evaSnp5,127 evaSnp5,150 evaSnp5,419 evaSnp5,473 evaSnp5,613 evaSnp5,856 gap,23 gap,68 genscan,25 genscan,160 gold,25 gold,83 gold,100 intronEst,39 intronEst,227 intronEst,237 intronEst,800 microsat,16 microsat,25 microsat,52 mrna,45 mrna,92 mrna,102 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netHg19,21 netHg19,40 netHg19,53 netHg19,140 netHg19,208 netHg19,219 netHg19,318 netHg19,387 netHg19,408 netHg19,415 netHg19,498 netHg19,687 refGene,41 refGene,143 refGene,241 refSeqComposite,179 refSeqComposite,232 refSeqComposite,406 refSeqComposite,427 refSeqComposite,764 refSeqComposite,889 refSeqComposite,931 refSeqComposite,995 refSeqComposite,1022 refSeqComposite,1338 refSeqComposite,1372 refSeqComposite,1395 refSeqComposite,1473 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 transMapEnsemblV5,55 transMapEnsemblV5,73 transMapEnsemblV5,451 transMapEnsemblV5,458 transMapEnsemblV5,467 transMapEnsemblV5,501 transMapEnsemblV5,511 transMapEnsemblV5,540 transMapEnsemblV5,579 transMapEstV5,42 transMapEstV5,420 transMapEstV5,427 transMapEstV5,436 transMapEstV5,470 transMapEstV5,480 transMapEstV5,509 transMapEstV5,548 transMapRefSeqV5,42 transMapRefSeqV5,420 transMapRefSeqV5,427 transMapRefSeqV5,436 transMapRefSeqV5,470 transMapRefSeqV5,480 transMapRefSeqV5,509 transMapRefSeqV5,548 transMapRnaV5,42 transMapRnaV5,420 transMapRnaV5,427 transMapRnaV5,436 transMapRnaV5,470 transMapRnaV5,480 transMapRnaV5,509 transMapRnaV5,548 transMapV5,41 transMapV5,68 transMapV5,526 transMapV5,533 transMapV5,542 transMapV5,576 transMapV5,586 transMapV5,615 transMapV5,654 uniprot,55 uniprot,93 uniprot,124 uniprot,146 uniprot,165 uniprot,175 uniprot,208 uniprot,456 uniprot,502 uniprot,555 uniprot,579 uniprot,596 uniprot,644 uniprot,679 uniprot,735 uniprot,868 uniprot,880 uniprot,1006 uniprot,1013 uniprot,1033 uniprot,1061 uniprot,1086 uniprot,1117 uniprot,1149 uniprot,1318 uniprot,1350 uniprot,1425 uniprot,1433 uniprot,1454 uniprot,1659 uniprot,1867 uniprot,1895 xenoMrna,50 xenoMrna,116 xenoMrna,167 xenoMrna,177 xenoRefGene,38 xenoRefGene,103 xenoRefGene,201 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5BaseBw,37 arg evaSnp4,899 evaSnp4,909 evaSnp5,899 evaSnp5,909 arian chainHg19,939 chainNetHg19,942 nestedRepeats,305 netHg19,939 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 articles refSeqComposite,1101 as animalQtl,75 animalQtl,129 augustusGene,77 augustusGene,79 chainHg19,460 chainHg19,500 chainHg19,523 chainHg19,538 chainHg19,798 chainHg19,853 chainHg19,911 chainNetHg19,463 chainNetHg19,503 chainNetHg19,526 chainNetHg19,541 chainNetHg19,801 chainNetHg19,856 chainNetHg19,914 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 ensGene,87 est,594 evaSnp4,64 evaSnp4,116 evaSnp4,237 evaSnp4,256 evaSnp4,543 evaSnp4,593 evaSnp4,1080 evaSnp4,1153 evaSnp4,1155 evaSnp4,1215 evaSnp4,1231 evaSnp5,64 evaSnp5,116 evaSnp5,237 evaSnp5,256 evaSnp5,543 evaSnp5,593 evaSnp5,1080 evaSnp5,1153 evaSnp5,1155 evaSnp5,1215 evaSnp5,1231 gap,70 genscan,35 genscan,37 intronEst,675 microsat,21 nestedRepeats,125 netHg19,460 netHg19,500 netHg19,523 netHg19,538 netHg19,798 netHg19,853 netHg19,911 refSeqComposite,413 refSeqComposite,502 refSeqComposite,522 refSeqComposite,535 refSeqComposite,622 refSeqComposite,890 refSeqComposite,1219 refSeqComposite,1400 refSeqComposite,1516 refSeqComposite,1636 rmsk,53 rmsk,55 transMapEnsemblV5,65 transMapEnsemblV5,187 transMapEnsemblV5,213 transMapEnsemblV5,225 transMapEnsemblV5,513 transMapEnsemblV5,624 transMapEstV5,156 transMapEstV5,182 transMapEstV5,194 transMapEstV5,482 transMapEstV5,593 transMapRefSeqV5,156 transMapRefSeqV5,182 transMapRefSeqV5,194 transMapRefSeqV5,482 transMapRefSeqV5,593 transMapRnaV5,156 transMapRnaV5,182 transMapRnaV5,194 transMapRnaV5,482 transMapRnaV5,593 transMapV5,262 transMapV5,288 transMapV5,300 transMapV5,588 transMapV5,699 uniprot,307 uniprot,598 uniprot,600 uniprot,621 uniprot,1100 uniprot,1778 windowmaskerSdust,18 xenoMrna,123 xenoMrna,128 ascii uniprot,1762 ask refGene,63 refSeqComposite,122 aspect refSeqComposite,705 assemblies augustusGene,196 augustusGene,237 chainHg19,317 chainHg19,579 chainNetHg19,320 chainNetHg19,582 evaSnp4,965 evaSnp4,975 evaSnp5,965 evaSnp5,975 gap,130 netHg19,317 netHg19,579 refSeqComposite,183 rmsk,107 transMapEnsemblV5,192 transMapEstV5,161 transMapRefSeqV5,161 transMapRnaV5,161 transMapV5,267 assembly augustusGene,197 chainHg19,149 chainHg19,156 chainHg19,304 chainNetHg19,152 chainNetHg19,159 chainNetHg19,307 evaSnp4,696 evaSnp5,696 gap,19 gap,21 gap,28 gap,37 gap,45 gap,116 gold,1 gold,2 gold,21 gold,23 gold,30 gold,39 gold,44 netHg19,149 netHg19,156 netHg19,304 refSeqComposite,370 refSeqComposite,476 transMapV5,105 transMapV5,123 transMapV5,134 ucscToRefSeq,34 uniprot,445 uniprot,701 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assessing refSeqComposite,649 assigned evaSnp4,668 evaSnp5,668 transMapEnsemblV5,459 transMapEstV5,428 transMapRefSeqV5,428 transMapRnaV5,428 transMapV5,534 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 est,107 evaSnp4,889 evaSnp5,889 gc5BaseBw,34 intronEst,188 refSeqComposite,1396 rmsk,224 simpleRepeat,51 transMapEnsemblV5,580 transMapEstV5,549 transMapRefSeqV5,549 transMapRnaV5,549 transMapV5,655 uniprot,787 associates ucscToRefSeq,11 association animalQtl,31 animalQtl,151 animalQtl,382 refSeqComposite,681 astashyn refGene,366 refSeqComposite,1753 xenoRefGene,325 at animalQtl,283 chainHg19,417 chainHg19,793 chainHg19,915 chainHg19,950 chainHg19,955 chainHg19,996 chainNetHg19,420 chainNetHg19,796 chainNetHg19,918 chainNetHg19,953 chainNetHg19,958 chainNetHg19,999 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 est,262 est,546 est,591 est,710 est,726 evaSnp4,48 evaSnp4,68 evaSnp4,76 evaSnp5,48 evaSnp5,68 evaSnp5,76 intronEst,65 intronEst,80 intronEst,105 intronEst,343 intronEst,627 intronEst,672 intronEst,791 intronEst,810 microsat,28 microsat,77 mrna,208 mrna,426 mrna,443 netHg19,417 netHg19,793 netHg19,915 netHg19,950 netHg19,955 netHg19,996 refGene,131 refGene,306 refGene,322 refSeqComposite,731 refSeqComposite,1046 refSeqComposite,1150 refSeqComposite,1274 refSeqComposite,1711 rmsk,243 rmsk,267 transMapEnsemblV5,293 transMapEnsemblV5,681 transMapEstV5,262 transMapEstV5,650 transMapRefSeqV5,262 transMapRefSeqV5,650 transMapRnaV5,262 transMapRnaV5,650 transMapV5,117 transMapV5,368 transMapV5,756 uniprot,825 uniprot,1946 uniprot,1991 xenoMrna,283 xenoMrna,501 xenoMrna,518 xenoRefGene,91 xenoRefGene,266 xenoRefGene,282 attempt est,578 intronEst,659 aug gap,15 gold,17 august animalQtl,361 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 uniprot,835 uniprot,867 auml windowmaskerSdust,95 automated evaSnp4,999 evaSnp4,1028 evaSnp5,999 evaSnp5,1028 transMapEnsemblV5,536 transMapEstV5,505 transMapRefSeqV5,505 transMapRnaV5,505 transMapV5,611 uniprot,1468 uniprot,1727 automatically evaSnp4,143 evaSnp5,143 uniprot,1565 av uniprot,2015 available animalQtl,23 animalQtl,139 augustusGene,239 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 ensGene,82 ensGene,122 evaSnp4,324 evaSnp4,396 evaSnp4,726 evaSnp5,324 evaSnp5,396 evaSnp5,726 nestedRepeats,259 nestedRepeats,276 refSeqComposite,180 refSeqComposite,276 refSeqComposite,473 refSeqComposite,565 refSeqComposite,650 refSeqComposite,1339 refSeqComposite,1591 rmsk,73 transMapEnsemblV5,188 transMapEnsemblV5,245 transMapEstV5,157 transMapEstV5,214 transMapRefSeqV5,157 transMapRefSeqV5,214 transMapRnaV5,157 transMapRnaV5,214 transMapV5,263 transMapV5,320 uniprot,881 uniprot,1660 uniprot,1981 windowmaskerSdust,40 average nestedRepeats,186 nestedRepeats,221 aware uniprot,1456 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainHg19,600 chainHg19,607 chainNetHg19,603 chainNetHg19,610 netHg19,600 netHg19,607 axtchain chainHg19,612 chainHg19,698 chainHg19,946 chainNetHg19,615 chainNetHg19,701 chainNetHg19,949 netHg19,612 netHg19,698 netHg19,946 b evaSnp4,1167 evaSnp4,1221 evaSnp5,1167 evaSnp5,1221 transMapEnsemblV5,717 transMapEnsemblV5,727 transMapEstV5,686 transMapEstV5,696 transMapRefSeqV5,686 transMapRefSeqV5,696 transMapRnaV5,686 transMapRnaV5,696 transMapV5,792 transMapV5,802 back chainHg19,592 chainNetHg19,595 netHg19,592 baertsch augustusGene,290 chainHg19,984 chainHg19,1042 chainHg19,1088 chainNetHg19,987 chainNetHg19,1045 chainNetHg19,1091 netHg19,984 netHg19,1042 netHg19,1088 transMapEnsemblV5,758 transMapEstV5,727 transMapRefSeqV5,727 transMapRnaV5,727 transMapV5,833 bairoch uniprot,2022 band cytoBandIdeo,2 barker ensGene,170 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 est,383 est,417 est,693 est,701 est,713 evaSnp4,122 evaSnp5,122 intronEst,464 intronEst,498 intronEst,774 intronEst,782 intronEst,794 mrna,356 mrna,409 mrna,417 mrna,429 refGene,289 refGene,297 refGene,309 refSeqComposite,1257 refSeqComposite,1265 refSeqComposite,1277 rmsk,217 rmsk,219 rmsk,222 xenoMrna,431 xenoMrna,483 xenoMrna,492 xenoMrna,504 xenoRefGene,249 xenoRefGene,257 xenoRefGene,269 base-level evaSnp4,79 evaSnp5,79 transMapEnsemblV5,319 transMapEstV5,288 transMapRefSeqV5,288 transMapRnaV5,288 transMapV5,394 based augustusGene,28 chainHg19,320 chainHg19,346 chainNetHg19,323 chainNetHg19,349 evaSnp4,857 evaSnp5,857 genscan,26 netHg19,320 netHg19,346 refSeqComposite,251 refSeqComposite,359 uniprot,60 uniprot,727 uniprot,1604 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 est,33 est,394 est,666 evaSnp4,137 evaSnp5,137 gap,139 gc5BaseBw,25 intronEst,45 intronEst,83 intronEst,475 intronEst,747 refSeqComposite,897 transMapV5,165 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 uniprot,1570 bastiaansen animalQtl,236 animalQtl,296 bbi evaSnp4,1118 evaSnp5,1118 bc149621.1 transMapEnsemblV5,456 transMapEstV5,425 transMapRefSeqV5,425 transMapRnaV5,425 transMapV5,531 bc149621.1-1 transMapEnsemblV5,462 transMapEnsemblV5,473 transMapEstV5,431 transMapEstV5,442 transMapRefSeqV5,431 transMapRefSeqV5,442 transMapRnaV5,431 transMapRnaV5,442 transMapV5,537 transMapV5,548 bc149621.1-1.1 transMapEnsemblV5,484 transMapEstV5,453 transMapRefSeqV5,453 transMapRnaV5,453 transMapV5,559 bc149621.1-2 transMapEnsemblV5,464 transMapEnsemblV5,486 transMapEstV5,433 transMapEstV5,455 transMapRefSeqV5,433 transMapRefSeqV5,455 transMapRnaV5,433 transMapRnaV5,455 transMapV5,539 transMapV5,561 bc149621.1-2.1 transMapEnsemblV5,493 transMapEstV5,462 transMapRefSeqV5,462 transMapRnaV5,462 transMapV5,568 bc149621.1-2.2 transMapEnsemblV5,495 transMapEstV5,464 transMapRefSeqV5,464 transMapRnaV5,464 transMapV5,570 be augustusGene,99 chainHg19,106 chainHg19,427 chainNetHg19,109 chainNetHg19,430 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 ensGene,61 ensGene,104 ensGene,138 est,106 est,119 est,141 est,250 est,260 est,271 est,302 est,320 est,330 est,379 est,430 est,526 est,634 evaSnp4,185 evaSnp4,266 evaSnp4,343 evaSnp4,357 evaSnp4,439 evaSnp4,541 evaSnp4,591 evaSnp4,667 evaSnp4,893 evaSnp4,908 evaSnp4,977 evaSnp4,987 evaSnp4,1004 evaSnp4,1042 evaSnp4,1064 evaSnp4,1072 evaSnp4,1095 evaSnp4,1102 evaSnp5,185 evaSnp5,266 evaSnp5,343 evaSnp5,357 evaSnp5,439 evaSnp5,541 evaSnp5,591 evaSnp5,667 evaSnp5,893 evaSnp5,908 evaSnp5,977 evaSnp5,987 evaSnp5,1004 evaSnp5,1042 evaSnp5,1064 evaSnp5,1072 evaSnp5,1095 evaSnp5,1102 gc5BaseBw,41 intronEst,56 intronEst,79 intronEst,187 intronEst,200 intronEst,222 intronEst,331 intronEst,341 intronEst,352 intronEst,383 intronEst,401 intronEst,411 intronEst,460 intronEst,511 intronEst,607 intronEst,715 microsat,19 microsat,39 mrna,65 mrna,87 mrna,196 mrna,206 mrna,217 mrna,248 mrna,266 mrna,276 mrna,325 mrna,369 nestedRepeats,269 nestedRepeats,291 netHg19,106 netHg19,427 refGene,126 refSeqComposite,303 refSeqComposite,725 refSeqComposite,935 refSeqComposite,966 refSeqComposite,1026 refSeqComposite,1103 refSeqComposite,1191 refSeqComposite,1294 refSeqComposite,1301 refSeqComposite,1317 refSeqComposite,1389 refSeqComposite,1449 refSeqComposite,1480 refSeqComposite,1500 refSeqComposite,1508 refSeqComposite,1582 refSeqComposite,1604 refSeqComposite,1674 refSeqComposite,1699 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 transMapEnsemblV5,63 transMapEnsemblV5,109 transMapEnsemblV5,144 transMapEnsemblV5,524 transMapEnsemblV5,553 transMapEnsemblV5,608 transMapEnsemblV5,616 transMapEnsemblV5,639 transMapEnsemblV5,646 transMapEstV5,78 transMapEstV5,113 transMapEstV5,493 transMapEstV5,522 transMapEstV5,577 transMapEstV5,585 transMapEstV5,608 transMapEstV5,615 transMapRefSeqV5,78 transMapRefSeqV5,113 transMapRefSeqV5,493 transMapRefSeqV5,522 transMapRefSeqV5,577 transMapRefSeqV5,585 transMapRefSeqV5,608 transMapRefSeqV5,615 transMapRnaV5,78 transMapRnaV5,113 transMapRnaV5,493 transMapRnaV5,522 transMapRnaV5,577 transMapRnaV5,585 transMapRnaV5,608 transMapRnaV5,615 transMapV5,184 transMapV5,219 transMapV5,599 transMapV5,628 transMapV5,683 transMapV5,691 transMapV5,714 transMapV5,721 uniprot,181 uniprot,246 uniprot,1094 uniprot,1105 uniprot,1143 uniprot,1197 uniprot,1270 uniprot,1327 uniprot,1556 uniprot,1694 uniprot,1715 uniprot,1740 uniprot,1750 uniprot,1759 uniprot,1770 uniprot,1793 uniprot,1800 uniprot,1882 xenoMrna,140 xenoMrna,162 xenoMrna,271 xenoMrna,281 xenoMrna,292 xenoMrna,323 xenoMrna,341 xenoMrna,351 xenoMrna,400 xenoMrna,444 xenoRefGene,86 bears est,91 intronEst,172 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 est,626 intronEst,707 uniprot,674 xenoMrna,102 bed evaSnp4,821 evaSnp5,821 bed3 windowmaskerSdust,76 been animalQtl,265 chainHg19,568 chainNetHg19,571 evaSnp4,674 evaSnp5,674 intronEst,7 nestedRepeats,89 netHg19,568 refSeqComposite,635 refSeqComposite,673 refSeqComposite,683 refSeqComposite,698 rmsk,70 rmsk,109 uniprot,34 uniprot,47 uniprot,303 uniprot,1043 before chainHg19,900 chainNetHg19,903 est,563 intronEst,644 netHg19,900 uniprot,934 begin refSeqComposite,222 refSeqComposite,351 beginning refSeqComposite,1048 refSeqComposite,1645 beloow refSeqComposite,337 below chainHg19,674 chainNetHg19,677 ensGene,54 evaSnp4,445 evaSnp5,445 genscan,154 genscan,168 nestedRepeats,68 netHg19,674 refSeqComposite,1391 refSeqComposite,1528 rmsk,104 uniprot,73 uniprot,92 uniprot,189 uniprot,207 uniprot,769 uniprot,898 benson est,743 est,771 intronEst,827 intronEst,855 microsat,102 microsat,112 microsat,114 mrna,460 mrna,488 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 xenoMrna,535 xenoMrna,563 best chainHg19,265 chainHg19,510 chainNetHg19,268 chainNetHg19,513 est,708 intronEst,789 mrna,424 netHg19,265 netHg19,510 refGene,304 refSeqComposite,1272 transMapEnsemblV5,240 transMapEstV5,209 transMapRefSeqV5,209 transMapRnaV5,209 transMapV5,66 transMapV5,315 uniprot,1074 uniprot,1415 xenoMrna,499 xenoRefGene,264 beta uniprot,364 better est,71 mrna,52 xenoMrna,57 between animalQtl,54 animalQtl,337 chainHg19,51 chainHg19,617 chainHg19,847 chainNetHg19,54 chainNetHg19,620 chainNetHg19,850 est,15 est,82 evaSnp4,108 evaSnp4,964 evaSnp4,974 evaSnp5,108 evaSnp5,964 evaSnp5,974 gap,126 gold,97 gold,102 intronEst,17 intronEst,74 intronEst,163 mrna,16 ncbiRefSeqGenomicDiff,4 netHg19,51 netHg19,617 netHg19,847 refSeqComposite,64 refSeqComposite,460 refSeqComposite,874 uniprot,375 uniprot,922 uniprot,1371 uniprot,1615 beyond animalQtl,408 bias uniprot,400 bigbed evaSnp4,824 evaSnp4,1038 evaSnp5,824 evaSnp5,1038 refSeqComposite,1375 refSeqComposite,1386 refSeqComposite,1476 uniprot,1736 bigbedtobed evaSnp4,1069 evaSnp4,1113 evaSnp5,1069 evaSnp5,1113 refSeqComposite,1505 refSeqComposite,1545 transMapEnsemblV5,613 transMapEnsemblV5,658 transMapEstV5,582 transMapEstV5,627 transMapRefSeqV5,582 transMapRefSeqV5,627 transMapRnaV5,582 transMapRnaV5,627 transMapV5,688 transMapV5,733 uniprot,1767 uniprot,1812 bigpsl transMapEnsemblV5,543 transMapEstV5,512 transMapRefSeqV5,512 transMapRnaV5,512 transMapV5,618 bin refSeqComposite,1431 refSeqComposite,1461 binaries evaSnp4,1093 evaSnp5,1093 transMapEnsemblV5,637 transMapEstV5,606 transMapRefSeqV5,606 transMapRnaV5,606 transMapV5,712 uniprot,1791 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 evaSnp4,1083 evaSnp5,1083 refSeqComposite,1519 transMapEnsemblV5,627 transMapEstV5,596 transMapRefSeqV5,596 transMapRnaV5,596 transMapV5,702 uniprot,1781 bins evaSnp4,292 evaSnp4,437 evaSnp5,292 evaSnp5,437 biocomput chainHg19,1035 chainNetHg19,1038 netHg19,1035 bioinformatics animalQtl,276 augustusGene,307 augustusGene,332 evaSnp4,1243 evaSnp5,1243 transMapEnsemblV5,775 transMapEstV5,744 transMapRefSeqV5,744 transMapRnaV5,744 transMapV5,850 windowmaskerSdust,106 biol cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,222 transMapEnsemblV5,810 transMapEstV5,779 transMapRefSeqV5,779 transMapRnaV5,779 transMapV5,885 biological uniprot,320 biology genscan,200 birds augustusGene,203 birney ensGene,172 bj evaSnp4,1217 evaSnp5,1217 black gap,71 gap,110 blast uniprot,949 uniprot,1084 uniprot,1115 blast-like est,801 intronEst,885 mrna,518 refGene,344 refSeqComposite,1731 xenoMrna,593 xenoRefGene,303 blastz chainHg19,912 chainHg19,1099 chainNetHg19,915 chainNetHg19,1102 netHg19,912 netHg19,1099 transMapEnsemblV5,78 transMapEnsemblV5,195 transMapEstV5,47 transMapEstV5,164 transMapRefSeqV5,47 transMapRefSeqV5,164 transMapRnaV5,47 transMapRnaV5,164 transMapV5,48 transMapV5,143 transMapV5,270 blat est,653 est,662 est,799 intronEst,734 intronEst,743 intronEst,883 mrna,394 mrna,516 refGene,265 refGene,342 refSeqComposite,1233 refSeqComposite,1729 transMapEnsemblV5,166 transMapEstV5,135 transMapRefSeqV5,135 transMapRnaV5,135 transMapV5,125 transMapV5,149 transMapV5,156 transMapV5,241 xenoMrna,15 xenoMrna,469 xenoMrna,591 xenoRefGene,225 blat--the xenoRefGene,302 block evaSnp4,131 evaSnp5,131 blocks chainHg19,44 chainHg19,639 chainHg19,660 chainNetHg19,47 chainNetHg19,642 chainNetHg19,663 gold,107 gold,134 intronEst,77 netHg19,44 netHg19,639 netHg19,660 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 ensGene,131 blue unipAliSwissprot,11 unipAliSwissprot,15 uniprot,507 uniprot,583 bond uniprot,473 bonds unipDisulfBond,2 unipDisulfBond,5 uniprot,334 uniprot,336 bostau9 evaSnp4,920 evaSnp5,920 both chainHg19,95 chainHg19,115 chainHg19,168 chainHg19,890 chainNetHg19,98 chainNetHg19,118 chainNetHg19,171 chainNetHg19,893 evaSnp4,519 evaSnp4,569 evaSnp5,519 evaSnp5,569 netHg19,95 netHg19,115 netHg19,168 netHg19,890 refGene,164 refGene,235 transMapEnsemblV5,509 transMapEstV5,478 transMapRefSeqV5,478 transMapRnaV5,478 transMapV5,584 uniprot,675 uniprot,1616 xenoRefGene,124 xenoRefGene,195 bothgap chainHg19,741 chainNetHg19,744 netHg19,741 boundaries gold,82 box chainHg19,370 chainHg19,452 chainNetHg19,373 chainNetHg19,455 est,205 est,216 est,256 evaSnp4,203 evaSnp5,203 gap,111 intronEst,286 intronEst,297 intronEst,337 mrna,151 mrna,162 mrna,202 netHg19,370 netHg19,452 refGene,254 xenoMrna,226 xenoMrna,237 xenoMrna,277 xenoRefGene,214 boxes chainHg19,121 chainHg19,131 chainHg19,441 chainNetHg19,124 chainNetHg19,134 chainNetHg19,444 est,176 gap,72 intronEst,257 mrna,122 nestedRepeats,126 netHg19,121 netHg19,131 netHg19,441 refSeqComposite,165 xenoMrna,197 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 evaSnp4,166 evaSnp5,166 refSeqComposite,942 branch transMapEnsemblV5,218 transMapEstV5,187 transMapRefSeqV5,187 transMapRnaV5,187 transMapV5,293 branch-point augustusGene,55 brejov transMapEnsemblV5,715 transMapEstV5,684 transMapRefSeqV5,684 transMapRnaV5,684 transMapV5,790 brian uniprot,1959 bridge gold,132 bridged gap,100 bridges animalQtl,336 briefly uniprot,778 brown gold,92 gold,106 refGene,360 refSeqComposite,1747 xenoRefGene,319 browser chainHg19,970 chainNetHg19,973 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 ensGene,67 est,223 est,347 est,364 evaSnp4,206 evaSnp4,993 evaSnp5,206 evaSnp5,993 intronEst,304 intronEst,428 intronEst,445 mrna,169 mrna,293 mrna,310 nestedRepeats,243 netHg19,970 refSeqComposite,1121 refSeqComposite,1183 refSeqComposite,1309 refSeqComposite,1446 transMapEnsemblV5,37 transMapEnsemblV5,164 transMapEnsemblV5,530 transMapEstV5,35 transMapEstV5,133 transMapEstV5,499 transMapRefSeqV5,35 transMapRefSeqV5,133 transMapRefSeqV5,499 transMapRnaV5,35 transMapRnaV5,133 transMapRnaV5,499 transMapV5,34 transMapV5,239 transMapV5,605 ucscToRefSeq,14 uniprot,1544 uniprot,1721 xenoMrna,244 xenoMrna,368 xenoMrna,385 browsing uniprot,1662 build refSeqComposite,299 uniprot,1552 building animalQtl,335 builds transMapEnsemblV5,54 built augustusGene,51 augustusGene,67 burge genscan,22 genscan,146 genscan,166 genscan,173 genscan,180 genscan,207 but chainHg19,543 chainNetHg19,546 est,483 est,540 est,593 intronEst,564 intronEst,621 intronEst,674 netHg19,543 refSeqComposite,426 refSeqComposite,895 refSeqComposite,1028 refSeqComposite,1447 rmsk,311 uniprot,638 uniprot,1047 button chainHg19,341 chainNetHg19,344 netHg19,341 by animalQtl,127 animalQtl,268 animalQtl,280 augustusGene,147 augustusGene,266 augustusGene,282 chainHg19,108 chainHg19,124 chainHg19,311 chainHg19,374 chainHg19,411 chainHg19,429 chainHg19,807 chainHg19,919 chainHg19,938 chainHg19,958 chainHg19,982 chainHg19,1003 chainNetHg19,111 chainNetHg19,127 chainNetHg19,314 chainNetHg19,377 chainNetHg19,414 chainNetHg19,432 chainNetHg19,810 chainNetHg19,922 chainNetHg19,941 chainNetHg19,961 chainNetHg19,985 chainNetHg19,1006 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 ensGene,15 est,265 est,493 est,661 est,739 evaSnp4,102 evaSnp4,129 evaSnp4,187 evaSnp4,239 evaSnp4,258 evaSnp4,278 evaSnp4,289 evaSnp4,363 evaSnp4,475 evaSnp4,495 evaSnp4,640 evaSnp4,728 evaSnp4,831 evaSnp5,102 evaSnp5,129 evaSnp5,187 evaSnp5,239 evaSnp5,258 evaSnp5,278 evaSnp5,289 evaSnp5,363 evaSnp5,475 evaSnp5,495 evaSnp5,640 evaSnp5,728 evaSnp5,831 gap,93 gc5BaseBw,81 genscan,20 genscan,88 genscan,121 gold,85 intronEst,91 intronEst,346 intronEst,574 intronEst,742 intronEst,823 microsat,110 mrna,211 mrna,456 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netHg19,108 netHg19,124 netHg19,311 netHg19,374 netHg19,411 netHg19,429 netHg19,807 netHg19,919 netHg19,938 netHg19,958 netHg19,982 netHg19,1003 refGene,140 refGene,145 refGene,209 refGene,227 refGene,233 refGene,329 refGene,334 refSeqComposite,38 refSeqComposite,49 refSeqComposite,69 refSeqComposite,206 refSeqComposite,371 refSeqComposite,384 refSeqComposite,444 refSeqComposite,555 refSeqComposite,624 refSeqComposite,637 refSeqComposite,641 refSeqComposite,685 refSeqComposite,761 refSeqComposite,766 refSeqComposite,843 refSeqComposite,861 refSeqComposite,1200 refSeqComposite,1716 refSeqComposite,1721 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 transMapEnsemblV5,23 transMapEnsemblV5,227 transMapEnsemblV5,395 transMapEnsemblV5,678 transMapEnsemblV5,696 transMapEnsemblV5,702 transMapEnsemblV5,740 transMapEstV5,21 transMapEstV5,196 transMapEstV5,364 transMapEstV5,647 transMapEstV5,665 transMapEstV5,671 transMapEstV5,709 transMapRefSeqV5,21 transMapRefSeqV5,196 transMapRefSeqV5,364 transMapRefSeqV5,647 transMapRefSeqV5,665 transMapRefSeqV5,671 transMapRefSeqV5,709 transMapRnaV5,21 transMapRnaV5,196 transMapRnaV5,364 transMapRnaV5,647 transMapRnaV5,665 transMapRnaV5,671 transMapRnaV5,709 transMapV5,20 transMapV5,302 transMapV5,470 transMapV5,753 transMapV5,771 transMapV5,777 transMapV5,815 ucscToRefSeq,44 uniprot,39 uniprot,49 uniprot,224 uniprot,713 uniprot,720 uniprot,818 uniprot,987 uniprot,995 uniprot,1015 uniprot,1028 uniprot,1045 uniprot,1538 uniprot,1764 uniprot,1943 windowmaskerSdust,6 windowmaskerSdust,20 xenoMrna,286 xenoMrna,531 xenoRefGene,100 xenoRefGene,105 xenoRefGene,169 xenoRefGene,187 xenoRefGene,193 xenoRefGene,289 xenoRefGene,294 c cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5BaseBw,23 genscan,181 genscan,208 refSeqComposite,913 refSeqComposite,954 refSeqComposite,981 refSeqComposite,1040 refSeqComposite,1067 refSeqComposite,1079 transMapEnsemblV5,725 transMapEnsemblV5,731 transMapEstV5,694 transMapEstV5,700 transMapRefSeqV5,694 transMapRefSeqV5,700 transMapRnaV5,694 transMapRnaV5,700 transMapV5,800 transMapV5,806 windowmaskerSdust,30 c-114100-125-31 chainHg19,669 chainNetHg19,672 netHg19,669 ca animalQtl,323 animalQtl,367 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainHg19,954 chainHg19,1000 chainNetHg19,957 chainNetHg19,1003 netHg19,954 netHg19,1000 called evaSnp4,1054 evaSnp5,1054 cameron ensGene,174 can augustusGene,98 chainHg19,90 chainHg19,105 chainNetHg19,93 chainNetHg19,108 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 ensGene,60 ensGene,103 ensGene,137 est,118 est,249 evaSnp4,184 evaSnp4,265 evaSnp4,438 evaSnp4,666 evaSnp4,976 evaSnp4,986 evaSnp4,1041 evaSnp4,1063 evaSnp4,1071 evaSnp4,1094 evaSnp4,1100 evaSnp5,184 evaSnp5,265 evaSnp5,438 evaSnp5,666 evaSnp5,976 evaSnp5,986 evaSnp5,1041 evaSnp5,1063 evaSnp5,1071 evaSnp5,1094 evaSnp5,1100 intronEst,199 intronEst,330 mrna,64 mrna,195 netHg19,90 netHg19,105 refGene,125 refSeqComposite,286 refSeqComposite,724 refSeqComposite,1102 refSeqComposite,1190 refSeqComposite,1293 refSeqComposite,1300 refSeqComposite,1315 refSeqComposite,1348 refSeqComposite,1388 refSeqComposite,1448 refSeqComposite,1456 refSeqComposite,1479 refSeqComposite,1499 refSeqComposite,1507 refSeqComposite,1560 refSeqComposite,1580 refSeqComposite,1603 refSeqComposite,1673 refSeqComposite,1698 rmsk,116 simpleRepeat,35 transMapEnsemblV5,523 transMapEnsemblV5,552 transMapEnsemblV5,607 transMapEnsemblV5,615 transMapEnsemblV5,638 transMapEnsemblV5,644 transMapEstV5,492 transMapEstV5,521 transMapEstV5,576 transMapEstV5,584 transMapEstV5,607 transMapEstV5,613 transMapRefSeqV5,492 transMapRefSeqV5,521 transMapRefSeqV5,576 transMapRefSeqV5,584 transMapRefSeqV5,607 transMapRefSeqV5,613 transMapRnaV5,492 transMapRnaV5,521 transMapRnaV5,576 transMapRnaV5,584 transMapRnaV5,607 transMapRnaV5,613 transMapV5,598 transMapV5,627 transMapV5,682 transMapV5,690 transMapV5,713 transMapV5,719 uniprot,180 uniprot,656 uniprot,1064 uniprot,1093 uniprot,1104 uniprot,1326 uniprot,1555 uniprot,1693 uniprot,1714 uniprot,1739 uniprot,1749 uniprot,1758 uniprot,1769 uniprot,1792 uniprot,1798 uniprot,1881 xenoMrna,139 xenoMrna,270 xenoRefGene,85 candidate animalQtl,33 animalQtl,152 cannot uniprot,1269 canonical intronEst,68 cap-selected est,556 intronEst,637 cap-selection est,565 intronEst,646 carissa animalQtl,188 cases chainHg19,190 chainHg19,398 chainNetHg19,193 chainNetHg19,401 netHg19,190 netHg19,398 uniprot,757 uniprot,1183 uniprot,1452 casper evaSnp4,1222 evaSnp5,1222 cat uniprot,1936 categorized chainHg19,499 chainNetHg19,502 netHg19,499 cattle animalQtl,92 cauldron chainHg19,1052 chainNetHg19,1055 netHg19,1052 cause chainHg19,481 chainNetHg19,484 netHg19,481 caused chainHg19,107 chainNetHg19,110 netHg19,107 cavanaugh est,745 intronEst,829 mrna,462 xenoMrna,537 cb transMapEnsemblV5,791 transMapEstV5,760 transMapRefSeqV5,760 transMapRnaV5,760 transMapV5,866 ccaaaaacaaaaaca evaSnp4,629 evaSnp5,629 cdna augustusGene,299 est,458 est,461 intronEst,539 intronEst,542 refSeqComposite,266 refSeqComposite,362 transMapEnsemblV5,388 transMapEnsemblV5,684 transMapEnsemblV5,767 transMapEstV5,357 transMapEstV5,653 transMapEstV5,736 transMapRefSeqV5,357 transMapRefSeqV5,653 transMapRefSeqV5,736 transMapRnaV5,357 transMapRnaV5,653 transMapRnaV5,736 transMapV5,15 transMapV5,463 transMapV5,759 transMapV5,842 cdnas transMapEnsemblV5,124 transMapEstV5,93 transMapRefSeqV5,93 transMapRnaV5,93 transMapV5,199 cell uniprot,563 cells est,453 intronEst,534 cerevisiae augustusGene,222 certain nestedRepeats,294 rmsk,301 cezard evaSnp4,1160 evaSnp5,1160 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainHg19,2 chainHg19,27 chainHg19,57 chainHg19,60 chainHg19,118 chainHg19,268 chainHg19,309 chainHg19,404 chainHg19,459 chainHg19,563 chainHg19,767 chainHg19,810 chainHg19,821 chainHg19,829 chainHg19,834 chainHg19,857 chainHg19,866 chainNetHg19,2 chainNetHg19,9 chainNetHg19,30 chainNetHg19,60 chainNetHg19,63 chainNetHg19,121 chainNetHg19,271 chainNetHg19,312 chainNetHg19,407 chainNetHg19,462 chainNetHg19,566 chainNetHg19,770 chainNetHg19,813 chainNetHg19,824 chainNetHg19,832 chainNetHg19,837 chainNetHg19,860 chainNetHg19,869 chainNetHg19Viewchain,1 chainNetHg19Viewchain,7 chainNetHg19Viewnet,7 netHg19,27 netHg19,57 netHg19,60 netHg19,118 netHg19,268 netHg19,309 netHg19,404 netHg19,459 netHg19,563 netHg19,767 netHg19,810 netHg19,821 netHg19,829 netHg19,834 netHg19,857 netHg19,866 transMapV5,137 uniprot,290 chained chainHg19,8 chainnet chainHg19,784 chainHg19,989 chainNetHg19,787 chainNetHg19,992 netHg19,784 netHg19,989 chains chainHg19,193 chainHg19,204 chainHg19,215 chainHg19,314 chainHg19,353 chainHg19,386 chainHg19,391 chainHg19,413 chainHg19,425 chainHg19,432 chainHg19,489 chainHg19,657 chainHg19,672 chainHg19,686 chainHg19,755 chainHg19,776 chainHg19,791 chainHg19,851 chainHg19,882 chainHg19,977 chainNetHg19,196 chainNetHg19,207 chainNetHg19,218 chainNetHg19,317 chainNetHg19,356 chainNetHg19,389 chainNetHg19,394 chainNetHg19,416 chainNetHg19,428 chainNetHg19,435 chainNetHg19,492 chainNetHg19,660 chainNetHg19,675 chainNetHg19,689 chainNetHg19,758 chainNetHg19,779 chainNetHg19,794 chainNetHg19,854 chainNetHg19,885 chainNetHg19,980 netHg19,193 netHg19,204 netHg19,215 netHg19,314 netHg19,353 netHg19,386 netHg19,391 netHg19,413 netHg19,425 netHg19,432 netHg19,489 netHg19,657 netHg19,672 netHg19,686 netHg19,755 netHg19,776 netHg19,791 netHg19,851 netHg19,882 netHg19,977 transMapEnsemblV5,80 transMapEnsemblV5,197 transMapEnsemblV5,210 transMapEnsemblV5,256 transMapEnsemblV5,281 transMapEnsemblV5,329 transMapEnsemblV5,510 transMapEstV5,49 transMapEstV5,166 transMapEstV5,179 transMapEstV5,225 transMapEstV5,250 transMapEstV5,298 transMapEstV5,479 transMapRefSeqV5,49 transMapRefSeqV5,166 transMapRefSeqV5,179 transMapRefSeqV5,225 transMapRefSeqV5,250 transMapRefSeqV5,298 transMapRefSeqV5,479 transMapRnaV5,49 transMapRnaV5,166 transMapRnaV5,179 transMapRnaV5,225 transMapRnaV5,250 transMapRnaV5,298 transMapRnaV5,479 transMapV5,50 transMapV5,86 transMapV5,272 transMapV5,285 transMapV5,331 transMapV5,356 transMapV5,404 transMapV5,585 unipChain,1 unipChain,7 uniprot,288 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 est,122 evaSnp4,249 evaSnp4,328 evaSnp4,900 evaSnp5,249 evaSnp5,328 evaSnp5,900 intronEst,203 mrna,68 refSeqComposite,905 refSeqComposite,919 xenoMrna,143 changed rmsk,285 uniprot,1382 changes evaSnp4,369 evaSnp5,369 characteristic est,327 intronEst,408 mrna,273 xenoMrna,348 characterized evaSnp4,675 evaSnp5,675 check chainHg19,336 chainNetHg19,339 netHg19,336 check-box refSeqComposite,729 checkbox uniprot,231 chen ensGene,176 chiaromonte chainHg19,1022 chainNetHg19,1025 netHg19,1022 chicken animalQtl,96 augustusGene,204 augustusGene,262 chmod uniprot,1921 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 est,283 est,322 intronEst,364 intronEst,403 mrna,229 mrna,268 uniprot,657 xenoMrna,304 xenoMrna,343 chosen est,345 intronEst,426 mrna,291 refSeqComposite,534 xenoMrna,366 chr16 refSeqComposite,1553 chr21 evaSnp4,1121 evaSnp5,1121 chr4 chainHg19,368 chainNetHg19,371 netHg19,368 chr6 transMapEnsemblV5,667 transMapEstV5,636 transMapRefSeqV5,636 transMapRnaV5,636 transMapV5,742 uniprot,1820 chris genscan,21 genscan,172 uniprot,1954 chrm gold,158 chrom evaSnp4,1120 evaSnp5,1120 refSeqComposite,1552 transMapEnsemblV5,666 transMapEstV5,635 transMapRefSeqV5,635 transMapRnaV5,635 transMapV5,741 uniprot,1819 chromosome chainHg19,245 chainHg19,323 chainHg19,348 chainHg19,356 chainHg19,366 chainHg19,375 chainHg19,522 chainHg19,537 chainHg19,553 chainHg19,621 chainHg19,626 chainNetHg19,248 chainNetHg19,326 chainNetHg19,351 chainNetHg19,359 chainNetHg19,369 chainNetHg19,378 chainNetHg19,525 chainNetHg19,540 chainNetHg19,556 chainNetHg19,624 chainNetHg19,629 cytoBandIdeo,1 evaSnp4,697 evaSnp5,697 gap,129 netHg19,245 netHg19,323 netHg19,348 netHg19,356 netHg19,366 netHg19,375 netHg19,522 netHg19,537 netHg19,553 netHg19,621 netHg19,626 ucscToRefSeq,15 uniprot,1416 chromosome-based chainHg19,316 chainNetHg19,319 netHg19,316 circle rmsk,202 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cl transMapEnsemblV5,723 transMapEstV5,692 transMapRefSeqV5,692 transMapRnaV5,692 transMapV5,798 clark ensGene,178 est,747 intronEst,831 mrna,464 xenoMrna,539 class evaSnp4,233 evaSnp4,255 evaSnp5,233 evaSnp5,255 rmsk,199 rmsk,253 classes evaSnp4,299 evaSnp4,814 evaSnp5,299 evaSnp5,814 rmsk,150 classification rmsk,266 rmsk,282 classified evaSnp4,474 evaSnp5,474 clawson gc5BaseBw,83 ucscToRefSeq,46 cleaved uniprot,249 click chainHg19,449 chainHg19,463 chainNetHg19,452 chainNetHg19,466 evaSnp4,208 evaSnp5,208 gc5BaseBw,56 netHg19,449 netHg19,463 refGene,148 refGene,252 refSeqComposite,747 refSeqComposite,769 transMapEnsemblV5,135 transMapEnsemblV5,149 transMapEstV5,104 transMapEstV5,118 transMapRefSeqV5,104 transMapRefSeqV5,118 transMapRnaV5,104 transMapRnaV5,118 transMapV5,210 transMapV5,224 uniprot,229 uniprot,481 uniprot,1673 xenoRefGene,108 xenoRefGene,212 clicking uniprot,1633 clinical refSeqComposite,581 clipped nestedRepeats,224 cloned est,463 intronEst,544 closer transMapEnsemblV5,68 transMapEstV5,37 transMapRefSeqV5,37 transMapRnaV5,37 transMapV5,36 closest augustusGene,241 clusters refSeqComposite,411 cm refGene,371 refSeqComposite,1758 xenoRefGene,330 cnv animalQtl,40 animalQtl,159 code evaSnp4,1077 evaSnp4,1091 evaSnp5,1077 evaSnp5,1091 refSeqComposite,1513 transMapEnsemblV5,621 transMapEnsemblV5,635 transMapEstV5,590 transMapEstV5,604 transMapRefSeqV5,590 transMapRefSeqV5,604 transMapRnaV5,590 transMapRnaV5,604 transMapV5,696 transMapV5,710 uniprot,1546 uniprot,1775 uniprot,1789 windowmaskerSdust,34 coding refGene,250 refSeqComposite,1080 simpleRepeat,38 uniprot,1102 uniprot,1133 xenoRefGene,210 coding_sequence_variant evaSnp4,775 evaSnp5,775 codon evaSnp4,456 evaSnp4,778 evaSnp5,456 evaSnp5,778 genscan,100 genscan,122 mrna,329 mrna,354 refGene,176 refGene,183 refGene,198 refGene,228 refSeqComposite,716 refSeqComposite,810 refSeqComposite,817 refSeqComposite,832 refSeqComposite,862 transMapEnsemblV5,113 transMapEstV5,82 transMapRefSeqV5,82 transMapRnaV5,82 transMapV5,188 xenoMrna,404 xenoMrna,429 xenoRefGene,136 xenoRefGene,143 xenoRefGene,158 xenoRefGene,188 codons genscan,89 genscan,93 refGene,203 refGene,210 refSeqComposite,837 refSeqComposite,844 xenoRefGene,163 xenoRefGene,170 cognate transMapEnsemblV5,179 transMapEstV5,148 transMapRefSeqV5,148 transMapRnaV5,148 transMapV5,254 coiled-coil uniprot,367 collaborator refSeqComposite,643 collaborators refSeqComposite,687 collapse evaSnp4,144 evaSnp5,144 collapsed nestedRepeats,173 collection animalQtl,147 animalQtl,166 refGene,34 refSeqComposite,31 xenoRefGene,31 collects animalQtl,20 color chainHg19,344 chainNetHg19,347 est,128 est,324 evaSnp4,290 evaSnp4,446 evaSnp5,290 evaSnp5,446 genscan,86 genscan,96 intronEst,209 intronEst,405 mrna,74 mrna,270 netHg19,344 refGene,96 refGene,207 refSeqComposite,603 refSeqComposite,626 refSeqComposite,841 rmsk,207 xenoMrna,149 xenoMrna,345 xenoRefGene,56 xenoRefGene,167 coloration gold,93 colored chainHg19,319 chainNetHg19,322 est,431 evaSnp4,420 evaSnp4,748 evaSnp5,420 evaSnp5,748 intronEst,512 mrna,370 netHg19,319 transMapEnsemblV5,145 transMapEstV5,114 transMapRefSeqV5,114 transMapRnaV5,114 transMapV5,220 uniprot,160 uniprot,176 xenoMrna,445 coloring chainHg19,335 chainNetHg19,338 est,418 genscan,116 intronEst,499 mrna,330 mrna,357 netHg19,335 refGene,177 refGene,184 refGene,222 refSeqComposite,811 refSeqComposite,818 refSeqComposite,856 transMapEnsemblV5,114 transMapEstV5,83 transMapRefSeqV5,83 transMapRnaV5,83 transMapV5,189 xenoMrna,405 xenoMrna,432 xenoRefGene,137 xenoRefGene,144 xenoRefGene,182 colors evaSnp4,417 evaSnp5,417 refGene,119 refGene,199 refSeqComposite,833 xenoRefGene,79 xenoRefGene,159 column nestedRepeats,107 refSeqComposite,1423 refSeqComposite,1434 columns transMapEnsemblV5,550 transMapEstV5,519 transMapRefSeqV5,519 transMapRnaV5,519 transMapV5,625 combination est,286 intronEst,367 mrna,232 xenoMrna,307 combinations xenoMrna,118 combined rmsk,232 comma-separated evaSnp4,350 evaSnp5,350 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 refSeqComposite,1544 refSeqComposite,1608 transMapEnsemblV5,254 transMapEstV5,223 transMapRefSeqV5,223 transMapRnaV5,223 transMapV5,329 uniprot,1871 uniprot,1875 commands uniprot,1902 comment uniprot,260 uniprot,282 uniprot,531 uniprot,615 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 comparative chainHg19,10 chainNetHg19,13 chainNetHg19Viewchain,11 chainNetHg19Viewnet,11 netHg19,10 transMapEnsemblV5,741 transMapEnsemblV5,796 transMapEstV5,710 transMapEstV5,765 transMapRefSeqV5,710 transMapRefSeqV5,765 transMapRnaV5,710 transMapRnaV5,765 transMapV5,816 transMapV5,871 compare mrna,339 refGene,193 refSeqComposite,827 transMapEnsemblV5,123 transMapEstV5,92 transMapRefSeqV5,92 transMapRnaV5,92 transMapV5,198 xenoMrna,414 xenoRefGene,153 compared transMapV5,153 comparing animalQtl,50 comparison animalQtl,306 genscan,109 uniprot,1260 comparisons animalQtl,416 compiled evaSnp4,1073 evaSnp5,1073 refSeqComposite,1509 transMapEnsemblV5,617 transMapEstV5,586 transMapRefSeqV5,586 transMapRnaV5,586 transMapV5,692 uniprot,1771 complete evaSnp4,937 evaSnp5,937 genscan,213 completely refGene,175 refSeqComposite,809 uniprot,1464 xenoRefGene,135 complex chainHg19,161 chainNetHg19,164 netHg19,161 complex_transcript_variant evaSnp4,791 evaSnp5,791 complexity nestedRepeats,40 rmsk,30 rmsk,182 component gold,135 composed uniprot,1396 composite refSeqComposite,16 refSeqComposite,148 compositional genscan,41 uniprot,399 comprehensive animalQtl,332 comput transMapEnsemblV5,809 transMapEstV5,778 transMapRefSeqV5,778 transMapRnaV5,778 transMapV5,884 computational genscan,196 uniprot,51 computed evaSnp4,840 evaSnp5,840 transMapEnsemblV5,226 transMapEstV5,195 transMapRefSeqV5,195 transMapRnaV5,195 transMapV5,301 comstock transMapEnsemblV5,722 transMapEstV5,691 transMapRefSeqV5,691 transMapRnaV5,691 transMapV5,797 concerning refGene,66 refSeqComposite,125 conditional augustusGene,118 configuration chainHg19,308 chainNetHg19,311 est,46 gc5BaseBw,60 gc5BaseBw,69 genscan,64 genscan,84 intronEst,130 mrna,27 nestedRepeats,114 netHg19,308 refGene,84 refSeqComposite,143 rmsk,138 transMapEnsemblV5,94 transMapEstV5,63 transMapRefSeqV5,63 transMapRnaV5,63 transMapV5,169 uniprot,235 uniprot,449 uniprot,650 uniprot,1755 xenoMrna,32 xenoRefGene,44 configured est,380 gc5BaseBw,42 intronEst,461 mrna,326 refGene,127 refSeqComposite,726 transMapEnsemblV5,110 transMapEstV5,79 transMapRefSeqV5,79 transMapRnaV5,79 transMapV5,185 xenoMrna,401 xenoRefGene,87 configuring evaSnp4,57 evaSnp5,57 conflicts unipConflict,2 unipConflict,5 uniprot,373 congress animalQtl,352 connect uniprot,1677 consequence evaSnp4,311 evaSnp4,714 evaSnp4,753 evaSnp5,311 evaSnp5,714 evaSnp5,753 consequences evaSnp4,1140 evaSnp5,1140 conservation transMapEnsemblV5,230 transMapEstV5,199 transMapRefSeqV5,199 transMapRnaV5,199 transMapV5,305 considerable est,637 intronEst,718 considered intronEst,57 consistency uniprot,402 consortium uniprot,1986 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 refSeqComposite,1214 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult est,217 intronEst,298 mrna,163 xenoMrna,238 contact uniprot,686 uniprot,1440 contain transMapV5,14 uniprot,1163 contained chainHg19,883 chainNetHg19,886 netHg19,883 refSeqComposite,1138 containing refSeqComposite,1653 transMapEnsemblV5,545 transMapEstV5,514 transMapRefSeqV5,514 transMapRnaV5,514 transMapV5,620 contains est,242 evaSnp4,20 evaSnp5,20 gap,117 intronEst,323 mrna,188 refGene,180 refSeqComposite,151 refSeqComposite,868 transMapEnsemblV5,17 transMapEstV5,15 transMapRefSeqV5,16 transMapRnaV5,16 xenoMrna,263 xenoRefGene,140 contamination est,625 intronEst,97 intronEst,706 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5BaseBw,31 contig gold,81 contigs gap,84 gold,70 gold,98 gold,115 continually animalQtl,62 contributed animalQtl,126 animalQtl,230 control animalQtl,177 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 evaSnp4,271 evaSnp5,271 refGene,130 refSeqComposite,730 xenoRefGene,90 convenience uniprot,404 conventions chainHg19,306 chainNetHg19,309 est,44 est,52 genscan,62 genscan,70 intronEst,128 intronEst,136 mrna,25 mrna,33 nestedRepeats,112 netHg19,306 refGene,82 refGene,90 refSeqComposite,141 refSeqComposite,451 refSeqComposite,597 rmsk,136 transMapEnsemblV5,92 transMapEnsemblV5,100 transMapEstV5,61 transMapEstV5,69 transMapRefSeqV5,61 transMapRefSeqV5,69 transMapRnaV5,61 transMapRnaV5,69 transMapV5,167 transMapV5,175 uniprot,447 xenoMrna,30 xenoMrna,38 xenoRefGene,42 xenoRefGene,50 convert evaSnp4,962 evaSnp4,972 evaSnp5,962 evaSnp5,972 converted chainHg19,598 chainNetHg19,601 evaSnp4,700 evaSnp4,810 evaSnp4,819 evaSnp5,700 evaSnp5,810 evaSnp5,819 netHg19,598 refSeqComposite,1170 refSeqComposite,1583 uniprot,1477 uniprot,1760 coordinates evaSnp4,198 evaSnp5,198 refSeqComposite,36 refSeqComposite,67 uniprot,29 uniprot,643 uniprot,1848 uniprot,1855 uniprot,1886 uniprot,1892 coordination animalQtl,277 copies microsat,80 copy animalQtl,37 animalQtl,156 uniprot,419 copying evaSnp4,190 evaSnp5,190 correct uniprot,962 uniprot,1222 corrections refGene,61 refSeqComposite,120 corresponding evaSnp4,692 evaSnp5,692 transMapEnsemblV5,257 transMapEstV5,226 transMapRefSeqV5,226 transMapRnaV5,226 transMapV5,332 corresponds est,225 evaSnp4,88 evaSnp5,88 intronEst,306 mrna,171 xenoMrna,246 could refSeqComposite,965 refSeqComposite,1540 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 gap,131 counts gold,142 cover est,558 intronEst,639 coverage uniprot,1485 covered chainHg19,806 chainNetHg19,809 gap,24 gold,26 netHg19,806 cow transMapEnsemblV5,448 transMapEstV5,417 transMapRefSeqV5,417 transMapRnaV5,417 transMapV5,523 cox ensGene,180 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create refSeqComposite,309 windowmaskerSdust,48 created chainHg19,981 chainNetHg19,984 microsat,89 netHg19,981 refSeqComposite,101 refSeqComposite,1149 rmsk,13 transMapEnsemblV5,74 transMapEstV5,43 transMapRefSeqV5,43 transMapRnaV5,43 transMapV5,42 uniprot,824 uniprot,1942 creates chainHg19,631 chainNetHg19,634 netHg19,631 credits animalQtl,185 augustusGene,247 chainHg19,907 chainNetHg19,910 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 ensGene,145 est,721 evaSnp4,1127 evaSnp5,1127 gc5BaseBw,71 genscan,169 intronEst,805 microsat,104 mrna,437 nestedRepeats,302 netHg19,907 refGene,317 refSeqComposite,1706 rmsk,325 simpleRepeat,66 transMapEnsemblV5,673 transMapEstV5,642 transMapRefSeqV5,642 transMapRnaV5,642 transMapV5,748 ucscToRefSeq,36 uniprot,1938 xenoMrna,512 xenoRefGene,277 criteria animalQtl,163 cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 est,300 est,318 est,356 est,374 intronEst,381 intronEst,399 intronEst,437 intronEst,455 mrna,246 mrna,264 mrna,302 mrna,320 transMapEnsemblV5,356 transMapEstV5,325 transMapRefSeqV5,325 transMapRnaV5,325 transMapV5,431 xenoMrna,321 xenoMrna,339 xenoMrna,377 xenoMrna,395 cross-species transMapEnsemblV5,26 transMapEstV5,24 transMapRefSeqV5,24 transMapRnaV5,24 transMapV5,23 cruz chainHg19,957 chainHg19,1002 chainNetHg19,960 chainNetHg19,1005 netHg19,957 netHg19,1002 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 cuff ensGene,182 culex augustusGene,220 cunningham evaSnp4,1162 evaSnp5,1162 curated animalQtl,120 evaSnp4,394 evaSnp4,721 evaSnp5,394 evaSnp5,721 ncbiRefSeq,6 ncbiRefSeqCurated,2 ncbiRefSeqCurated,6 refGene,333 refGene,411 refSeqComposite,87 refSeqComposite,201 refSeqComposite,209 refSeqComposite,250 refSeqComposite,314 refSeqComposite,399 refSeqComposite,421 refSeqComposite,468 refSeqComposite,519 refSeqComposite,552 refSeqComposite,587 refSeqComposite,1408 refSeqComposite,1668 refSeqComposite,1720 refSeqComposite,1798 uniprot,35 uniprot,110 uniprot,142 xenoRefGene,293 xenoRefGene,370 curator animalQtl,181 rmsk,261 curators animalQtl,171 curr nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current est,160 intronEst,241 mrna,106 nestedRepeats,250 uniprot,1296 uniprot,1575 uniprot,1692 uniprot,1712 xenoMrna,181 current_ids.vcf.gz evaSnp4,690 evaSnp5,690 currently gold,75 refSeqComposite,472 curwen ensGene,184 cutoff refSeqComposite,938 cytoplamsic uniprot,518 cytoplasmic unipLocCytopl,1 unipLocCytopl,3 uniprot,276 uniprot,284 uniprot,569 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5BaseBw,24 d animalQtl,295 augustusGene,293 chainHg19,1049 chainHg19,1093 chainNetHg19,1052 chainNetHg19,1096 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 ensGene,171 evaSnp4,1225 evaSnp4,1233 evaSnp5,1225 evaSnp5,1233 genscan,192 netHg19,1049 netHg19,1093 transMapEnsemblV5,761 transMapEnsemblV5,795 transMapEstV5,730 transMapEstV5,764 transMapRefSeqV5,730 transMapRefSeqV5,764 transMapRnaV5,730 transMapRnaV5,764 transMapV5,836 transMapV5,870 d23-6 est,792 intronEst,876 mrna,509 xenoMrna,584 d36-42 est,766 intronEst,850 mrna,483 xenoMrna,558 d501-4 refGene,429 refSeqComposite,1816 xenoRefGene,388 d71-5 uniprot,2005 d756-63 refGene,395 refSeqComposite,1782 xenoRefGene,354 d871-9 animalQtl,397 da est,744 est,772 intronEst,828 intronEst,856 mrna,461 mrna,489 xenoMrna,536 xenoMrna,564 danrer10 evaSnp4,923 evaSnp5,923 danrer11 evaSnp4,925 evaSnp5,925 dark refGene,113 refSeqComposite,621 unipAliSwissprot,10 uniprot,162 uniprot,582 uniprot,587 xenoRefGene,73 darker intronEst,145 darkly est,66 mrna,47 xenoMrna,52 data animalQtl,26 animalQtl,32 animalQtl,57 animalQtl,69 animalQtl,113 animalQtl,138 animalQtl,145 animalQtl,165 animalQtl,175 animalQtl,219 animalQtl,383 cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 ensGene,55 ensGene,59 ensGene,70 ensGene,102 est,731 evaSnp4,220 evaSnp4,224 evaSnp4,245 evaSnp4,277 evaSnp4,678 evaSnp4,951 evaSnp4,985 evaSnp4,996 evaSnp4,1002 evaSnp4,1021 evaSnp4,1139 evaSnp4,1237 evaSnp5,220 evaSnp5,224 evaSnp5,245 evaSnp5,277 evaSnp5,678 evaSnp5,951 evaSnp5,985 evaSnp5,996 evaSnp5,1002 evaSnp5,1021 evaSnp5,1139 evaSnp5,1237 gap,96 gc5BaseBw,73 intronEst,815 microsat,47 mrna,448 nestedRepeats,263 nestedRepeats,280 refGene,37 refGene,327 refSeqComposite,153 refSeqComposite,652 refSeqComposite,1153 refSeqComposite,1159 refSeqComposite,1285 refSeqComposite,1289 refSeqComposite,1311 refSeqComposite,1363 refSeqComposite,1648 refSeqComposite,1714 rmsk,126 rmsk,287 transMapEnsemblV5,515 transMapEnsemblV5,519 transMapEnsemblV5,533 transMapEnsemblV5,570 transMapEnsemblV5,574 transMapEnsemblV5,688 transMapEstV5,484 transMapEstV5,488 transMapEstV5,502 transMapEstV5,539 transMapEstV5,543 transMapEstV5,657 transMapRefSeqV5,484 transMapRefSeqV5,488 transMapRefSeqV5,502 transMapRefSeqV5,539 transMapRefSeqV5,543 transMapRefSeqV5,657 transMapRnaV5,484 transMapRnaV5,488 transMapRnaV5,502 transMapRnaV5,539 transMapRnaV5,543 transMapRnaV5,657 transMapV5,590 transMapV5,594 transMapV5,608 transMapV5,645 transMapV5,649 transMapV5,763 ucscToRefSeq,28 ucscToRefSeq,38 uniprot,32 uniprot,45 uniprot,892 uniprot,895 uniprot,1683 uniprot,1705 uniprot,1709 uniprot,1724 uniprot,1837 uniprot,1980 xenoMrna,523 xenoRefGene,34 xenoRefGene,287 database animalQtl,18 animalQtl,59 animalQtl,183 animalQtl,257 animalQtl,333 animalQtl,376 animalQtl,395 chainHg19,973 chainNetHg19,976 ensGene,193 est,764 est,790 evaSnp4,47 evaSnp4,511 evaSnp4,561 evaSnp5,47 evaSnp5,511 evaSnp5,561 intronEst,848 intronEst,874 mrna,481 mrna,507 nestedRepeats,345 netHg19,973 refGene,393 refGene,414 refGene,427 refSeqComposite,560 refSeqComposite,1398 refSeqComposite,1780 refSeqComposite,1801 refSeqComposite,1814 rmsk,125 rmsk,368 transMapEnsemblV5,165 transMapEstV5,134 transMapRefSeqV5,134 transMapRnaV5,134 transMapV5,240 ucscToRefSeq,25 ucscToRefSeq,35 uniprot,25 uniprot,821 uniprot,2003 uniprot,2031 xenoMrna,556 xenoMrna,582 xenoRefGene,352 xenoRefGene,373 xenoRefGene,386 databases est,612 est,738 intronEst,101 intronEst,693 intronEst,822 mrna,455 refSeqComposite,278 refSeqComposite,425 transMapEnsemblV5,695 transMapEstV5,664 transMapRefSeqV5,664 transMapRnaV5,664 transMapV5,770 xenoMrna,530 dataset refSeqComposite,528 david chainHg19,967 chainNetHg19,970 netHg19,967 davis transMapEnsemblV5,724 transMapEstV5,693 transMapRefSeqV5,693 transMapRnaV5,693 transMapV5,799 days animalQtl,261 dbsnp evaSnp4,46 evaSnp5,46 de augustusGene,303 transMapEnsemblV5,771 transMapEstV5,740 transMapRefSeqV5,740 transMapRnaV5,740 transMapV5,846 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec nestedRepeats,389 nestedRepeats,411 rmsk,412 rmsk,434 transMapEnsemblV5,746 transMapEnsemblV5,812 transMapEstV5,715 transMapEstV5,781 transMapRefSeqV5,715 transMapRefSeqV5,781 transMapRnaV5,715 transMapRnaV5,781 transMapV5,821 transMapV5,887 default chainHg19,312 chainNetHg19,315 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netHg19,312 refGene,141 refGene,234 refSeqComposite,762 refSeqComposite,1036 refSeqComposite,1063 uniprot,225 xenoRefGene,101 xenoRefGene,194 defined refSeqComposite,623 uniprot,305 uniprot,1387 definition gap,39 gold,41 degraded est,527 intronEst,608 degree est,622 intronEst,703 deleted evaSnp4,506 evaSnp5,506 deleterious evaSnp4,426 evaSnp5,426 deletion chainHg19,145 chainHg19,1054 chainNetHg19,148 chainNetHg19,1057 est,440 evaSnp4,499 evaSnp4,536 evaSnp5,499 evaSnp5,536 intronEst,521 mrna,379 netHg19,145 netHg19,1054 refSeqComposite,946 refSeqComposite,1042 refSeqComposite,1069 rmsk,220 xenoMrna,454 deletions chainHg19,113 chainHg19,176 chainNetHg19,116 chainNetHg19,179 evaSnp4,30 evaSnp5,30 netHg19,113 netHg19,176 delins evaSnp4,599 evaSnp5,599 delivered gap,51 gold,50 dense est,58 evaSnp4,146 evaSnp5,146 gold,79 intronEst,142 mrna,39 nestedRepeats,157 nestedRepeats,168 xenoMrna,44 density evaSnp4,172 evaSnp5,172 dependencies genscan,183 depending uniprot,442 uniprot,808 depicts gold,68 windowmaskerSdust,15 deposited est,599 intronEst,680 deprecated uniprot,1044 derived chainHg19,757 chainNetHg19,760 netHg19,757 uniprot,830 described chainHg19,764 chainNetHg19,767 genscan,161 nestedRepeats,60 nestedRepeats,338 netHg19,764 refSeqComposite,1637 rmsk,96 rmsk,361 uniprot,1524 describes augustusGene,226 gap,60 gold,59 describing evaSnp4,365 evaSnp5,365 refSeqComposite,254 description animalQtl,12 augustusGene,12 chainHg19,12 chainHg19,769 chainNetHg19,15 chainNetHg19,772 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ensGene,9 ensGene,32 est,10 est,109 evaSnp4,17 evaSnp5,17 gap,7 gc5BaseBw,11 genscan,10 genscan,77 genscan,133 gold,8 intronEst,12 intronEst,190 microsat,10 mrna,10 mrna,55 nestedRepeats,14 netHg19,12 netHg19,769 refGene,15 refGene,137 refSeqComposite,11 refSeqComposite,737 rmsk,9 simpleRepeat,11 transMapEnsemblV5,14 transMapEnsemblV5,232 transMapEstV5,12 transMapEstV5,201 transMapRefSeqV5,13 transMapRefSeqV5,201 transMapRnaV5,13 transMapRnaV5,201 transMapV5,11 transMapV5,307 ucscToRefSeq,8 uniprot,11 uniprot,106 windowmaskerSdust,12 xenoMrna,10 xenoMrna,130 xenoRefGene,10 xenoRefGene,97 descriptions augustusGene,91 designed refSeqComposite,1436 uniprot,1355 desired est,285 intronEst,366 mrna,231 xenoMrna,306 destination transMapEnsemblV5,414 transMapEstV5,383 transMapRefSeqV5,383 transMapRnaV5,383 transMapV5,489 destined uniprot,244 destuniq transMapEnsemblV5,433 transMapEstV5,402 transMapRefSeqV5,402 transMapRnaV5,402 transMapV5,508 detail genscan,164 detailed augustusGene,90 chainHg19,455 chainHg19,474 chainNetHg19,458 chainNetHg19,477 nestedRepeats,70 netHg19,455 netHg19,474 rmsk,37 uniprot,692 details evaSnp4,176 evaSnp5,176 refSeqComposite,94 refSeqComposite,1122 rmsk,119 transMapEnsemblV5,234 transMapEstV5,203 transMapRefSeqV5,203 transMapRnaV5,203 transMapV5,309 uniprot,499 uniprot,771 uniprot,1157 uniprot,1584 determination transMapEnsemblV5,272 transMapEstV5,241 transMapRefSeqV5,241 transMapRnaV5,241 transMapV5,347 determine transMapV5,90 determined evaSnp4,257 evaSnp5,257 windowmaskerSdust,19 determining chainHg19,479 chainNetHg19,482 netHg19,479 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed animalQtl,63 chainHg19,914 chainHg19,949 chainHg19,995 chainNetHg19,917 chainNetHg19,952 chainNetHg19,998 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 netHg19,914 netHg19,949 netHg19,995 development animalQtl,205 developmental animalQtl,253 deviation evaSnp4,662 evaSnp5,662 dfam rmsk,112 di-nucleotide microsat,3 microsat,32 diagnostics refSeqComposite,582 diekhans augustusGene,288 transMapEnsemblV5,680 transMapEnsemblV5,713 transMapEnsemblV5,756 transMapEnsemblV5,788 transMapEstV5,649 transMapEstV5,682 transMapEstV5,725 transMapEstV5,757 transMapRefSeqV5,649 transMapRefSeqV5,682 transMapRefSeqV5,725 transMapRefSeqV5,757 transMapRnaV5,649 transMapRnaV5,682 transMapRnaV5,725 transMapRnaV5,757 transMapV5,755 transMapV5,788 transMapV5,831 transMapV5,863 uniprot,1540 uniprot,1957 diemand uniprot,2014 differ est,403 intronEst,484 refSeqComposite,287 uniprot,746 uniprot,1131 difference uniprot,1251 differences ncbiRefSeqGenomicDiff,3 refSeqComposite,63 refSeqComposite,459 refSeqComposite,888 refSeqComposite,957 uniprot,374 uniprot,921 uniprot,1370 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainHg19,554 chainNetHg19,557 ensGene,22 evaSnp4,376 evaSnp4,615 evaSnp4,645 evaSnp5,376 evaSnp5,615 evaSnp5,645 gc5BaseBw,50 genscan,54 netHg19,554 refGene,74 refSeqComposite,98 refSeqComposite,133 refSeqComposite,870 rmsk,149 uniprot,634 xenoMrna,111 differing refSeqComposite,152 difficult transMapEnsemblV5,276 transMapEstV5,245 transMapRefSeqV5,245 transMapRnaV5,245 transMapV5,351 diffs ncbiRefSeqGenomicDiff,2 refSeqComposite,456 refSeqComposite,866 refSeqComposite,1196 refSeqComposite,1370 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 direction est,78 est,96 intronEst,159 intronEst,177 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 ensGene,111 uniprot,993 directory ensGene,86 ensGene,94 refSeqComposite,1526 refSeqComposite,1575 refSeqComposite,1595 rmsk,134 discarded chainHg19,683 chainNetHg19,686 netHg19,683 refGene,275 refSeqComposite,1243 transMapEnsemblV5,380 transMapEstV5,349 transMapRefSeqV5,349 transMapRnaV5,349 transMapV5,455 xenoRefGene,235 discoveries animalQtl,51 discovery transMapEnsemblV5,735 transMapEstV5,704 transMapRefSeqV5,704 transMapRnaV5,704 transMapV5,810 discussion nestedRepeats,364 rmsk,387 disease uniprot,545 uniprot,616 diseases simpleRepeat,54 display chainHg19,237 chainHg19,305 chainHg19,350 chainHg19,380 chainHg19,439 chainHg19,468 chainHg19,497 chainHg19,971 chainNetHg19,240 chainNetHg19,308 chainNetHg19,353 chainNetHg19,383 chainNetHg19,442 chainNetHg19,471 chainNetHg19,500 chainNetHg19,974 est,43 est,51 est,59 est,124 est,151 est,181 est,326 est,350 est,366 est,382 est,392 est,441 evaSnp4,60 evaSnp4,139 evaSnp4,168 evaSnp4,215 evaSnp4,514 evaSnp4,564 evaSnp5,60 evaSnp5,139 evaSnp5,168 evaSnp5,215 evaSnp5,514 evaSnp5,564 genscan,61 genscan,69 genscan,104 gold,130 intronEst,116 intronEst,127 intronEst,135 intronEst,143 intronEst,205 intronEst,232 intronEst,262 intronEst,407 intronEst,431 intronEst,447 intronEst,463 intronEst,473 intronEst,522 mrna,24 mrna,32 mrna,40 mrna,70 mrna,97 mrna,127 mrna,272 mrna,296 mrna,312 mrna,328 mrna,380 nestedRepeats,111 netHg19,237 netHg19,305 netHg19,350 netHg19,380 netHg19,439 netHg19,468 netHg19,497 netHg19,971 refGene,81 refGene,89 refGene,118 refGene,154 refGene,197 refSeqComposite,140 refSeqComposite,450 refSeqComposite,596 refSeqComposite,717 refSeqComposite,775 refSeqComposite,831 refSeqComposite,1179 refSeqComposite,1442 rmsk,135 rmsk,141 rmsk,212 transMapEnsemblV5,91 transMapEnsemblV5,99 transMapEnsemblV5,112 transMapEstV5,60 transMapEstV5,68 transMapEstV5,81 transMapRefSeqV5,60 transMapRefSeqV5,68 transMapRefSeqV5,81 transMapRnaV5,60 transMapRnaV5,68 transMapRnaV5,81 transMapV5,166 transMapV5,174 transMapV5,187 uniprot,446 xenoMrna,29 xenoMrna,37 xenoMrna,45 xenoMrna,145 xenoMrna,172 xenoMrna,202 xenoMrna,347 xenoMrna,371 xenoMrna,387 xenoMrna,403 xenoMrna,455 xenoRefGene,41 xenoRefGene,49 xenoRefGene,78 xenoRefGene,114 xenoRefGene,157 displayed chainHg19,416 chainHg19,513 chainHg19,688 chainNetHg19,419 chainNetHg19,516 chainNetHg19,691 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 evaSnp4,82 evaSnp4,107 evaSnp4,115 evaSnp5,82 evaSnp5,107 evaSnp5,115 gc5BaseBw,54 intronEst,801 nestedRepeats,124 nestedRepeats,217 netHg19,416 netHg19,513 netHg19,688 refGene,242 refSeqComposite,1115 xenoRefGene,202 displays chainHg19,120 chainNetHg19,123 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 evaSnp4,216 evaSnp5,216 microsat,13 netHg19,120 rmsk,145 simpleRepeat,14 xenoMrna,13 dissemination animalQtl,384 dissertation augustusGene,105 distance transMapEnsemblV5,219 transMapEstV5,188 transMapRefSeqV5,188 transMapRnaV5,188 transMapV5,294 distances transMapEnsemblV5,70 transMapEstV5,39 transMapRefSeqV5,39 transMapRnaV5,39 transMapV5,38 distant est,582 intronEst,663 transMapEnsemblV5,268 transMapEstV5,237 transMapRefSeqV5,237 transMapRnaV5,237 transMapV5,63 transMapV5,343 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,84 distributions augustusGene,83 genscan,42 disulf unipDisulfBond,1 uniprot,472 disulfide unipDisulfBond,4 uniprot,333 uniprot,335 diverged chainHg19,906 chainNetHg19,909 nestedRepeats,212 netHg19,906 transMapV5,151 diverse animalQtl,420 divided uniprot,56 dj est,752 est,776 intronEst,836 intronEst,860 mrna,469 mrna,493 xenoMrna,544 xenoMrna,568 dl est,780 intronEst,864 mrna,497 xenoMrna,572 dna chainHg19,1015 chainNetHg19,1018 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 genscan,219 microsat,123 nestedRepeats,33 nestedRepeats,41 netHg19,1015 refSeqComposite,1081 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 xenoMrna,108 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 evaSnp4,865 evaSnp5,865 refSeqComposite,389 transMapEnsemblV5,317 transMapEstV5,286 transMapRefSeqV5,286 transMapRnaV5,286 transMapV5,392 uniprot,168 uniprot,1129 doc rmsk,132 document gap,57 gold,56 documentation evaSnp4,938 evaSnp5,938 gap,29 gold,31 documented animalQtl,168 doi evaSnp4,1202 evaSnp5,1202 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domain unipLocExtra,4 domains unipDomain,1 unipDomain,3 unipLocCytopl,4 unipLocTransMemb,4 uniprot,255 uniprot,257 uniprot,266 uniprot,268 uniprot,277 uniprot,279 uniprot,323 uniprot,325 uniprot,331 uniprot,391 uniprot,514 uniprot,516 uniprot,519 uniprot,550 done augustusGene,265 augustusGene,281 donna animalQtl,213 donor genscan,31 double chainHg19,128 chainHg19,157 chainNetHg19,131 chainNetHg19,160 netHg19,128 netHg19,157 refSeqComposite,1016 double-lined chainHg19,217 chainNetHg19,220 netHg19,217 double-sided chainHg19,102 chainNetHg19,105 netHg19,102 down ensGene,186 download ensGene,93 ensGene,143 evaSnp4,1029 evaSnp4,1046 evaSnp5,1029 evaSnp5,1046 refSeqComposite,1561 refSeqComposite,1704 transMapEnsemblV5,557 transMapEstV5,526 transMapRefSeqV5,526 transMapRnaV5,526 transMapV5,632 uniprot,1744 uniprot,1983 downloaded evaSnp4,680 evaSnp4,1043 evaSnp4,1079 evaSnp5,680 evaSnp5,1043 evaSnp5,1079 refSeqComposite,1162 refSeqComposite,1326 refSeqComposite,1515 transMapEnsemblV5,554 transMapEnsemblV5,623 transMapEstV5,523 transMapEstV5,592 transMapRefSeqV5,523 transMapRefSeqV5,592 transMapRnaV5,523 transMapRnaV5,592 transMapV5,629 transMapV5,698 ucscToRefSeq,30 uniprot,1741 uniprot,1777 downloading evaSnp4,1089 evaSnp5,1089 transMapEnsemblV5,633 transMapEstV5,602 transMapRefSeqV5,602 transMapRnaV5,602 transMapV5,708 uniprot,1787 downloads ensGene,74 ensGene,85 refSeqComposite,1329 refSeqComposite,1345 refSeqComposite,1484 refSeqComposite,1574 refSeqComposite,1599 refSeqComposite,1678 rmsk,76 uniprot,1698 downstream refSeqComposite,1453 downstream_gene_variant evaSnp4,798 evaSnp5,798 dr refGene,405 refSeqComposite,1792 xenoRefGene,364 dracheva animalQtl,209 animalQtl,290 drastically intronEst,103 drawn gap,107 gold,126 draws uniprot,1532 drosophila augustusGene,213 due chainHg19,142 chainHg19,210 chainHg19,222 chainNetHg19,145 chainNetHg19,213 chainNetHg19,225 evaSnp4,374 evaSnp5,374 netHg19,142 netHg19,210 netHg19,222 refSeqComposite,975 uniprot,848 uniprot,919 uniprot,1368 duplicate uniprot,594 duplication chainHg19,1053 chainNetHg19,1056 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netHg19,1053 duplications transMapEnsemblV5,310 transMapEnsemblV5,507 transMapEstV5,279 transMapEstV5,476 transMapRefSeqV5,279 transMapRefSeqV5,476 transMapRnaV5,279 transMapRnaV5,476 transMapV5,385 transMapV5,582 during chainHg19,811 chainNetHg19,814 netHg19,811 dynamic chainHg19,644 chainNetHg19,647 netHg19,644 e ensGene,173 uniprot,2021 e.g chainHg19,367 chainNetHg19,370 evaSnp4,530 evaSnp4,580 evaSnp4,627 evaSnp4,647 evaSnp4,834 evaSnp4,895 evaSnp4,1112 evaSnp5,530 evaSnp5,580 evaSnp5,627 evaSnp5,647 evaSnp5,834 evaSnp5,895 evaSnp5,1112 netHg19,367 refSeqComposite,1132 uniprot,398 uniprot,467 e247 transMapEnsemblV5,815 transMapEstV5,784 transMapRefSeqV5,784 transMapRnaV5,784 transMapV5,890 each chainHg19,255 chainNetHg19,258 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 est,214 evaSnp4,360 evaSnp5,360 genscan,99 intronEst,295 mrna,160 nestedRepeats,120 netHg19,255 refSeqComposite,538 refSeqComposite,1425 transMapEnsemblV5,386 transMapEnsemblV5,400 transMapEnsemblV5,409 transMapEnsemblV5,428 transMapEstV5,355 transMapEstV5,369 transMapEstV5,378 transMapEstV5,397 transMapRefSeqV5,355 transMapRefSeqV5,369 transMapRefSeqV5,378 transMapRefSeqV5,397 transMapRnaV5,355 transMapRnaV5,369 transMapRnaV5,378 transMapRnaV5,397 transMapV5,461 transMapV5,475 transMapV5,484 transMapV5,503 uniprot,151 xenoMrna,235 early animalQtl,260 echo uniprot,1925 edge uniprot,1182 uniprot,1451 editor animalQtl,182 editors genscan,195 effect est,597 evaSnp4,287 evaSnp4,428 evaSnp5,287 evaSnp5,428 intronEst,678 effects evaSnp4,296 evaSnp5,296 either chainHg19,125 chainNetHg19,128 evaSnp4,279 evaSnp5,279 gap,86 netHg19,125 rmsk,273 uniprot,816 uniprot,1398 electronic nestedRepeats,348 rmsk,371 electronically animalQtl,347 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 eliminate est,669 intronEst,750 eliminating intronEst,109 elsevier genscan,202 em windowmaskerSdust,93 emerged chainHg19,817 chainNetHg19,820 est,567 intronEst,648 netHg19,817 end est,517 est,535 est,545 est,586 evaSnp4,1124 evaSnp5,1124 intronEst,598 intronEst,616 intronEst,626 intronEst,667 refSeqComposite,1050 refSeqComposite,1556 rmsk,245 transMapEnsemblV5,670 transMapEstV5,639 transMapRefSeqV5,639 transMapRnaV5,639 transMapV5,745 uniprot,126 uniprot,210 uniprot,1823 ends intronEst,90 enough refSeqComposite,1024 ensembl ensGene,1 ensGene,3 ensGene,16 ensGene,38 ensGene,57 ensGene,151 ensGene,162 ensGene,191 evaSnp4,400 evaSnp4,729 evaSnp4,1156 evaSnp5,400 evaSnp5,729 evaSnp5,1156 transMapEnsemblV5,2 transMapEnsemblV5,4 transMapEnsemblV5,20 transMapEnsemblV5,40 transMapEnsemblV5,47 transMapEnsemblV5,58 transMapEnsemblV5,589 transMapEnsemblV5,705 transMapEstV5,558 transMapEstV5,674 transMapRefSeqV5,558 transMapRefSeqV5,674 transMapRnaV5,558 transMapRnaV5,674 transMapV5,664 transMapV5,780 uniprot,731 uniprot,834 uniprot,865 ensgene.txt.gz ensGene,88 ensure transMapEnsemblV5,382 transMapEstV5,351 transMapRefSeqV5,351 transMapRnaV5,351 transMapV5,457 enter chainHg19,361 chainNetHg19,364 netHg19,361 entered est,251 est,261 intronEst,332 intronEst,342 mrna,197 mrna,207 xenoMrna,272 xenoMrna,282 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 windowmaskerSdust,37 entirely uniprot,1434 entries refSeqComposite,1354 entry evaSnp4,983 evaSnp5,983 epub evaSnp4,1206 evaSnp5,1206 equal evaSnp4,642 evaSnp5,642 er animalQtl,325 era animalQtl,388 eric animalQtl,191 ermolaeva refGene,368 refSeqComposite,1755 xenoRefGene,327 errors refSeqComposite,949 especially est,152 intronEst,233 mrna,98 xenoMrna,173 est est,9 est,84 est,180 est,448 est,611 est,632 est,683 est,729 intronEst,11 intronEst,60 intronEst,75 intronEst,100 intronEst,125 intronEst,165 intronEst,261 intronEst,529 intronEst,692 intronEst,713 intronEst,764 intronEst,813 mrna,9 refSeqComposite,263 refSeqComposite,363 transMapEnsemblV5,686 transMapEstV5,4 transMapEstV5,18 transMapEstV5,655 transMapRefSeqV5,655 transMapRnaV5,655 transMapV5,761 xenoMrna,9 established refSeqComposite,684 ests est,2 est,4 est,20 est,26 est,190 est,295 est,310 est,351 est,369 est,487 est,532 est,543 est,644 est,671 intronEst,2 intronEst,4 intronEst,22 intronEst,38 intronEst,113 intronEst,119 intronEst,153 intronEst,271 intronEst,376 intronEst,391 intronEst,432 intronEst,450 intronEst,568 intronEst,613 intronEst,624 intronEst,725 intronEst,752 transMapEnsemblV5,176 transMapEnsemblV5,598 transMapEstV5,2 transMapEstV5,145 transMapEstV5,567 transMapRefSeqV5,145 transMapRefSeqV5,567 transMapRnaV5,145 transMapRnaV5,567 transMapV5,251 transMapV5,673 et cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 ensGene,45 ensGene,188 evaSnp4,848 evaSnp4,1180 evaSnp5,848 evaSnp5,1180 refGene,378 refSeqComposite,1765 transMapEnsemblV5,732 transMapEstV5,701 transMapRefSeqV5,701 transMapRnaV5,701 transMapV5,807 xenoRefGene,337 etc evaSnp4,837 evaSnp5,837 uniprot,479 european evaSnp4,9 evaSnp4,34 evaSnp4,683 evaSnp4,1134 evaSnp4,1183 evaSnp5,9 evaSnp5,34 evaSnp5,683 evaSnp5,1134 evaSnp5,1183 eva evaSnp4,1 evaSnp4,37 evaSnp4,240 evaSnp4,280 evaSnp4,476 evaSnp4,686 evaSnp4,833 evaSnp4,947 evaSnp5,1 evaSnp5,37 evaSnp5,240 evaSnp5,280 evaSnp5,476 evaSnp5,686 evaSnp5,833 evaSnp5,947 evaluate uniprot,1461 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 evasnp4.bb evaSnp4,1055 evaSnp4,1119 evasnp5.bb evaSnp5,1055 evaSnp5,1119 even est,606 est,613 intronEst,687 intronEst,694 uniprot,136 every chainHg19,270 chainNetHg19,273 evaSnp4,716 evaSnp5,716 netHg19,270 refSeqComposite,475 uniprot,1571 evidence intronEst,63 refSeqComposite,260 refSeqComposite,275 evolution chainHg19,1050 chainNetHg19,1053 netHg19,1050 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 transMapEnsemblV5,69 transMapEstV5,38 transMapRefSeqV5,38 transMapRnaV5,38 transMapV5,37 ew est,756 intronEst,840 mrna,473 xenoMrna,548 ewing transMapEnsemblV5,726 transMapEstV5,695 transMapRefSeqV5,695 transMapRnaV5,695 transMapV5,801 exact uniprot,1622 uniprot,1747 example est,183 est,236 intronEst,264 intronEst,317 mrna,129 mrna,182 refSeqComposite,1530 rmsk,256 transMapEnsemblV5,445 transMapEnsemblV5,657 transMapEstV5,414 transMapEstV5,626 transMapRefSeqV5,414 transMapRefSeqV5,626 transMapRnaV5,414 transMapRnaV5,626 transMapV5,96 transMapV5,520 transMapV5,732 uniprot,1450 uniprot,1811 uniprot,1901 xenoMrna,204 xenoMrna,257 examples refSeqComposite,405 except evaSnp4,617 evaSnp5,617 refSeqComposite,40 uniprot,508 exclude est,131 est,336 est,342 intronEst,212 intronEst,417 intronEst,423 mrna,77 mrna,282 mrna,288 xenoMrna,152 xenoMrna,357 xenoMrna,363 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 uniprot,1918 exist chainHg19,400 chainNetHg19,403 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,96 netHg19,400 refSeqComposite,292 exists refSeqComposite,329 exon augustusGene,86 exon_loss_variant evaSnp4,764 evaSnp5,764 exons chainHg19,48 chainNetHg19,51 genscan,44 netHg19,48 transMapEnsemblV5,739 transMapEstV5,708 transMapRefSeqV5,708 transMapRnaV5,708 transMapV5,814 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expanded refSeqComposite,661 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense intronEst,107 transMapEnsemblV5,295 transMapEstV5,264 transMapRefSeqV5,264 transMapRnaV5,264 transMapV5,370 experimentally uniprot,304 explanation gc5BaseBw,66 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 ensGene,62 evaSnp4,988 evaSnp5,988 refSeqComposite,1302 uniprot,1716 expressed est,17 est,191 intronEst,19 intronEst,272 mrna,137 xenoMrna,212 expression animalQtl,30 animalQtl,150 cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extra transMapEnsemblV5,549 transMapEstV5,518 transMapRefSeqV5,518 transMapRnaV5,518 transMapV5,624 extracellular unipLocExtra,1 unipLocExtra,3 uniprot,254 uniprot,262 uniprot,513 uniprot,566 extract refSeqComposite,1532 extracted nestedRepeats,23 f animalQtl,242 chainHg19,1023 chainNetHg19,1026 evaSnp4,1163 evaSnp5,1163 gold,154 netHg19,1023 refGene,365 refSeqComposite,1752 xenoRefGene,324 facilitate animalQtl,47 genscan,106 uniprot,1852 factor est,228 intronEst,309 mrna,174 xenoMrna,249 fair evaSnp4,1187 evaSnp5,1187 famiglietti uniprot,2018 families uniprot,1395 family rmsk,249 faq augustusGene,45 ensGene,28 evaSnp4,982 evaSnp4,1023 evaSnp5,982 evaSnp5,1023 genscan,60 nestedRepeats,298 refGene,80 refSeqComposite,139 rmsk,321 transMapEnsemblV5,576 transMapEstV5,545 transMapRefSeqV5,545 transMapRnaV5,545 transMapV5,651 uniprot,1839 far uniprot,599 farrell refGene,370 refSeqComposite,1757 xenoRefGene,329 fashion evaSnp4,757 evaSnp5,757 fasta refSeqComposite,1658 feature chainHg19,241 chainNetHg19,244 est,386 genscan,129 intronEst,467 mrna,332 netHg19,241 refGene,185 refGene,218 refSeqComposite,819 refSeqComposite,852 transMapEnsemblV5,116 transMapEstV5,85 transMapRefSeqV5,85 transMapRnaV5,85 transMapV5,191 uniprot,64 uniprot,524 uniprot,613 xenoMrna,407 xenoRefGene,145 xenoRefGene,178 features animalQtl,73 evaSnp4,1107 evaSnp5,1107 refGene,121 refSeqComposite,720 transMapEnsemblV5,651 transMapEstV5,620 transMapRefSeqV5,620 transMapRnaV5,620 transMapV5,726 uniprot,694 uniprot,1805 xenoRefGene,81 feb chainHg19,4 chainHg19,66 chainHg19,300 chainNetHg19,5 chainNetHg19,69 chainNetHg19,303 chainNetHg19Viewchain,3 chainNetHg19Viewnet,3 netHg19,4 netHg19,66 netHg19,300 fed chainHg19,610 chainNetHg19,613 netHg19,610 feedback refGene,47 refSeqComposite,106 uniprot,1445 uniprot,1961 fewer transMapV5,159 ffer windowmaskerSdust,96 field augustusGene,120 evaSnp4,522 evaSnp4,528 evaSnp4,572 evaSnp4,578 evaSnp5,522 evaSnp5,528 evaSnp5,572 evaSnp5,578 fields evaSnp4,225 evaSnp5,225 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 evaSnp4,1039 evaSnp4,1049 evaSnp5,1039 evaSnp5,1049 gap,50 gap,66 gold,49 gold,65 refSeqComposite,1167 refSeqComposite,1376 refSeqComposite,1387 refSeqComposite,1652 uniprot,884 uniprot,1511 uniprot,1614 uniprot,1737 uniprot,1756 windowmaskerSdust,77 filenames uniprot,1748 uniprot,1894 files ensGene,78 evaSnp4,691 evaSnp4,817 evaSnp5,691 evaSnp5,817 refSeqComposite,1160 refSeqComposite,1477 transMapEnsemblV5,544 transMapEnsemblV5,578 transMapEstV5,513 transMapEstV5,547 transMapRefSeqV5,513 transMapRefSeqV5,547 transMapRnaV5,513 transMapRnaV5,547 transMapV5,619 transMapV5,653 uniprot,1863 fill chainHg19,841 chainHg19,874 chainNetHg19,844 chainNetHg19,877 netHg19,841 netHg19,874 filled chainHg19,409 chainHg19,428 chainHg19,823 chainHg19,896 chainNetHg19,412 chainNetHg19,431 chainNetHg19,826 chainNetHg19,899 netHg19,409 netHg19,428 netHg19,823 netHg19,896 filter chainHg19,373 chainNetHg19,376 est,116 est,165 est,178 est,187 est,234 est,275 est,299 est,317 est,355 est,373 genscan,82 intronEst,197 intronEst,246 intronEst,259 intronEst,268 intronEst,315 intronEst,356 intronEst,380 intronEst,398 intronEst,436 intronEst,454 mrna,62 mrna,111 mrna,124 mrna,133 mrna,180 mrna,221 mrna,245 mrna,263 mrna,301 mrna,319 netHg19,373 uniprot,187 uniprot,664 xenoMrna,137 xenoMrna,186 xenoMrna,199 xenoMrna,208 xenoMrna,255 xenoMrna,296 xenoMrna,320 xenoMrna,338 xenoMrna,376 xenoMrna,394 filtered est,338 evaSnp4,267 evaSnp5,267 intronEst,419 mrna,284 transMapEnsemblV5,77 transMapEnsemblV5,349 transMapEstV5,46 transMapEstV5,318 transMapRefSeqV5,46 transMapRefSeqV5,318 transMapRnaV5,46 transMapRnaV5,318 transMapV5,45 transMapV5,424 uniprot,1480 uniprot,1499 xenoMrna,359 filtering est,277 evaSnp4,178 evaSnp5,178 intronEst,358 mrna,223 transMapEnsemblV5,236 transMapEnsemblV5,304 transMapEstV5,205 transMapEstV5,273 transMapRefSeqV5,205 transMapRefSeqV5,273 transMapRnaV5,205 transMapRnaV5,273 transMapV5,311 transMapV5,379 uniprot,693 uniprot,912 uniprot,1154 xenoMrna,298 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 uniprot,1153 finally evaSnp4,403 evaSnp4,732 evaSnp5,403 evaSnp5,732 find chainHg19,653 chainNetHg19,656 netHg19,653 rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainHg19,280 chainNetHg19,283 netHg19,280 transMapEnsemblV5,774 transMapEstV5,743 transMapRefSeqV5,743 transMapRnaV5,743 transMapV5,849 finds transMapV5,158 finger uniprot,327 finished gold,156 transMapEnsemblV5,360 transMapEstV5,329 transMapRefSeqV5,329 transMapRnaV5,329 transMapV5,435 first chainHg19,781 chainNetHg19,784 netHg19,781 refSeqComposite,1422 uniprot,70 xenoMrna,70 fish augustusGene,201 fit chainHg19,801 chainNetHg19,804 nestedRepeats,175 netHg19,801 refSeqComposite,391 five refSeqComposite,869 refSeqComposite,885 fix uniprot,851 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 fly augustusGene,214 follow refSeqComposite,594 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 evaSnp4,727 evaSnp5,727 following animalQtl,79 chainHg19,662 chainNetHg19,665 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 evaSnp4,481 evaSnp4,756 evaSnp4,981 evaSnp5,481 evaSnp5,756 evaSnp5,981 gap,119 genscan,81 netHg19,662 refSeqComposite,448 refSeqComposite,1543 transMapEnsemblV5,586 transMapEstV5,555 transMapRefSeqV5,555 transMapRnaV5,555 transMapV5,661 windowmaskerSdust,56 follows est,49 genscan,67 intronEst,133 mrna,30 refGene,87 refSeqComposite,891 refSeqComposite,1401 transMapEnsemblV5,97 transMapEnsemblV5,214 transMapEstV5,66 transMapEstV5,183 transMapRefSeqV5,66 transMapRefSeqV5,183 transMapRnaV5,66 transMapRnaV5,183 transMapV5,172 transMapV5,289 xenoMrna,35 xenoRefGene,47 for animalQtl,146 animalQtl,164 animalQtl,308 animalQtl,378 animalQtl,414 augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 chainHg19,254 chainHg19,269 chainHg19,279 chainHg19,286 chainHg19,486 chainNetHg19,257 chainNetHg19,272 chainNetHg19,282 chainNetHg19,289 chainNetHg19,489 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 ensGene,17 ensGene,30 ensGene,72 ensGene,79 ensGene,98 ensGene,152 ensGene,157 est,53 est,111 est,182 est,213 est,235 est,408 est,419 est,432 est,480 evaSnp4,40 evaSnp4,359 evaSnp4,383 evaSnp4,715 evaSnp4,853 evaSnp4,936 evaSnp4,998 evaSnp4,1017 evaSnp4,1024 evaSnp4,1027 evaSnp4,1050 evaSnp4,1084 evaSnp4,1088 evaSnp4,1192 evaSnp5,40 evaSnp5,359 evaSnp5,383 evaSnp5,715 evaSnp5,853 evaSnp5,936 evaSnp5,998 evaSnp5,1017 evaSnp5,1024 evaSnp5,1027 evaSnp5,1050 evaSnp5,1084 evaSnp5,1088 evaSnp5,1192 gc5BaseBw,64 genscan,49 genscan,71 genscan,124 genscan,131 genscan,174 intronEst,114 intronEst,137 intronEst,192 intronEst,263 intronEst,294 intronEst,316 intronEst,489 intronEst,500 intronEst,513 intronEst,561 microsat,95 mrna,34 mrna,57 mrna,128 mrna,159 mrna,181 mrna,345 mrna,358 mrna,371 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netHg19,254 netHg19,269 netHg19,279 netHg19,286 netHg19,486 refGene,48 refGene,64 refGene,69 refGene,91 refGene,213 refSeqComposite,41 refSeqComposite,73 refSeqComposite,92 refSeqComposite,107 refSeqComposite,123 refSeqComposite,128 refSeqComposite,235 refSeqComposite,244 refSeqComposite,330 refSeqComposite,394 refSeqComposite,452 refSeqComposite,474 refSeqComposite,537 refSeqComposite,598 refSeqComposite,719 refSeqComposite,743 refSeqComposite,847 refSeqComposite,1178 refSeqComposite,1290 refSeqComposite,1331 refSeqComposite,1441 refSeqComposite,1520 refSeqComposite,1529 refSeqComposite,1660 refSeqComposite,1688 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 transMapEnsemblV5,41 transMapEnsemblV5,45 transMapEnsemblV5,67 transMapEnsemblV5,101 transMapEnsemblV5,129 transMapEnsemblV5,146 transMapEnsemblV5,189 transMapEnsemblV5,215 transMapEnsemblV5,233 transMapEnsemblV5,264 transMapEnsemblV5,266 transMapEnsemblV5,284 transMapEnsemblV5,288 transMapEnsemblV5,385 transMapEnsemblV5,399 transMapEnsemblV5,408 transMapEnsemblV5,444 transMapEnsemblV5,520 transMapEnsemblV5,535 transMapEnsemblV5,564 transMapEnsemblV5,628 transMapEnsemblV5,632 transMapEnsemblV5,656 transMapEnsemblV5,799 transMapEstV5,36 transMapEstV5,70 transMapEstV5,98 transMapEstV5,115 transMapEstV5,158 transMapEstV5,184 transMapEstV5,202 transMapEstV5,233 transMapEstV5,235 transMapEstV5,253 transMapEstV5,257 transMapEstV5,354 transMapEstV5,368 transMapEstV5,377 transMapEstV5,413 transMapEstV5,489 transMapEstV5,504 transMapEstV5,533 transMapEstV5,597 transMapEstV5,601 transMapEstV5,625 transMapEstV5,768 transMapRefSeqV5,36 transMapRefSeqV5,70 transMapRefSeqV5,98 transMapRefSeqV5,115 transMapRefSeqV5,158 transMapRefSeqV5,184 transMapRefSeqV5,202 transMapRefSeqV5,233 transMapRefSeqV5,235 transMapRefSeqV5,253 transMapRefSeqV5,257 transMapRefSeqV5,354 transMapRefSeqV5,368 transMapRefSeqV5,377 transMapRefSeqV5,413 transMapRefSeqV5,489 transMapRefSeqV5,504 transMapRefSeqV5,533 transMapRefSeqV5,597 transMapRefSeqV5,601 transMapRefSeqV5,625 transMapRefSeqV5,768 transMapRnaV5,36 transMapRnaV5,70 transMapRnaV5,98 transMapRnaV5,115 transMapRnaV5,158 transMapRnaV5,184 transMapRnaV5,202 transMapRnaV5,233 transMapRnaV5,235 transMapRnaV5,253 transMapRnaV5,257 transMapRnaV5,354 transMapRnaV5,368 transMapRnaV5,377 transMapRnaV5,413 transMapRnaV5,489 transMapRnaV5,504 transMapRnaV5,533 transMapRnaV5,597 transMapRnaV5,601 transMapRnaV5,625 transMapRnaV5,768 transMapV5,35 transMapV5,61 transMapV5,95 transMapV5,97 transMapV5,150 transMapV5,176 transMapV5,204 transMapV5,221 transMapV5,264 transMapV5,290 transMapV5,308 transMapV5,339 transMapV5,341 transMapV5,359 transMapV5,363 transMapV5,460 transMapV5,474 transMapV5,483 transMapV5,519 transMapV5,595 transMapV5,610 transMapV5,639 transMapV5,703 transMapV5,707 transMapV5,731 transMapV5,874 ucscToRefSeq,39 uniprot,75 uniprot,78 uniprot,401 uniprot,405 uniprot,462 uniprot,497 uniprot,532 uniprot,549 uniprot,697 uniprot,739 uniprot,743 uniprot,770 uniprot,842 uniprot,846 uniprot,861 uniprot,886 uniprot,964 uniprot,997 uniprot,1017 uniprot,1023 uniprot,1057 uniprot,1070 uniprot,1097 uniprot,1119 uniprot,1211 uniprot,1238 uniprot,1320 uniprot,1393 uniprot,1427 uniprot,1627 uniprot,1644 uniprot,1651 uniprot,1661 uniprot,1726 uniprot,1782 uniprot,1786 uniprot,1810 uniprot,1833 uniprot,1840 uniprot,1869 uniprot,1977 uniprot,1982 uniprot,2034 windowmaskerSdust,35 windowmaskerSdust,86 windowmaskerSdust,103 xenoMrna,39 xenoMrna,62 xenoMrna,132 xenoMrna,203 xenoMrna,234 xenoMrna,256 xenoMrna,420 xenoMrna,433 xenoMrna,446 xenoRefGene,19 xenoRefGene,51 xenoRefGene,173 force animalQtl,207 form animalQtl,202 uniprot,1665 format chainHg19,601 chainNetHg19,604 ensGene,77 ensGene,97 evaSnp4,825 evaSnp5,825 gap,62 gold,61 netHg19,601 refSeqComposite,1168 refSeqComposite,1357 refSeqComposite,1377 refSeqComposite,1403 refSeqComposite,1417 refSeqComposite,1564 refSeqComposite,1578 refSeqComposite,1586 refSeqComposite,1659 transMapEnsemblV5,417 transMapEstV5,386 transMapRefSeqV5,386 transMapRnaV5,386 transMapV5,492 formats refSeqComposite,1177 uniprot,885 uniprot,1865 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainHg19,435 chainNetHg19,438 netHg19,435 found augustusGene,100 ensGene,139 evaSnp4,978 evaSnp4,1096 evaSnp5,978 evaSnp5,1096 gold,137 mrna,412 refSeqComposite,1192 refSeqComposite,1390 refSeqComposite,1675 refSeqComposite,1700 transMapEnsemblV5,640 transMapEstV5,609 transMapRefSeqV5,609 transMapRnaV5,609 transMapV5,715 uniprot,241 uniprot,1128 uniprot,1271 uniprot,1328 uniprot,1557 uniprot,1751 uniprot,1794 xenoMrna,486 four chainHg19,503 chainNetHg19,506 netHg19,503 xenoMrna,117 fragments est,39 gold,4 intronEst,51 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 frameshift_variant evaSnp4,765 evaSnp5,765 free uniprot,1435 fritz animalQtl,193 animalQtl,324 from animalQtl,7 animalQtl,121 animalQtl,198 animalQtl,215 animalQtl,226 animalQtl,237 animalQtl,244 augustusGene,19 chainHg19,173 chainHg19,298 chainHg19,555 chainHg19,577 chainHg19,758 chainHg19,931 chainHg19,963 chainNetHg19,176 chainNetHg19,301 chainNetHg19,558 chainNetHg19,580 chainNetHg19,761 chainNetHg19,934 chainNetHg19,966 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ensGene,106 ensGene,112 est,404 est,452 est,473 est,583 est,601 est,645 est,728 evaSnp4,8 evaSnp4,32 evaSnp4,663 evaSnp4,681 evaSnp4,873 evaSnp4,901 evaSnp4,912 evaSnp4,1006 evaSnp4,1044 evaSnp4,1074 evaSnp4,1132 evaSnp5,8 evaSnp5,32 evaSnp5,663 evaSnp5,681 evaSnp5,873 evaSnp5,901 evaSnp5,912 evaSnp5,1006 evaSnp5,1044 evaSnp5,1074 evaSnp5,1132 gap,47 genscan,15 gold,3 gold,46 intronEst,485 intronEst,533 intronEst,554 intronEst,664 intronEst,682 intronEst,726 intronEst,812 mrna,5 mrna,445 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netHg19,173 netHg19,298 netHg19,555 netHg19,577 netHg19,758 netHg19,931 netHg19,963 refGene,28 refGene,205 refGene,324 refSeqComposite,5 refSeqComposite,25 refSeqComposite,288 refSeqComposite,294 refSeqComposite,422 refSeqComposite,482 refSeqComposite,839 refSeqComposite,1099 refSeqComposite,1154 refSeqComposite,1163 refSeqComposite,1327 refSeqComposite,1482 refSeqComposite,1510 refSeqComposite,1523 refSeqComposite,1571 refSeqComposite,1592 refSeqComposite,1606 refSeqComposite,1713 rmsk,86 transMapEnsemblV5,29 transMapEnsemblV5,157 transMapEnsemblV5,555 transMapEnsemblV5,618 transMapEnsemblV5,683 transMapEstV5,27 transMapEstV5,126 transMapEstV5,524 transMapEstV5,587 transMapEstV5,652 transMapRefSeqV5,27 transMapRefSeqV5,126 transMapRefSeqV5,524 transMapRefSeqV5,587 transMapRefSeqV5,652 transMapRnaV5,27 transMapRnaV5,126 transMapRnaV5,524 transMapRnaV5,587 transMapRnaV5,652 transMapV5,26 transMapV5,111 transMapV5,232 transMapV5,630 transMapV5,693 transMapV5,758 ucscToRefSeq,20 ucscToRefSeq,31 uniprot,21 uniprot,36 uniprot,115 uniprot,198 uniprot,250 uniprot,557 uniprot,747 uniprot,831 uniprot,890 uniprot,915 uniprot,1507 uniprot,1696 uniprot,1742 uniprot,1772 uniprot,1844 uniprot,1953 uniprot,1962 windowmaskerSdust,41 xenoMrna,5 xenoMrna,24 xenoMrna,520 xenoRefGene,25 xenoRefGene,165 xenoRefGene,284 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 ftp windowmaskerSdust,44 full animalQtl,344 chainHg19,235 chainHg19,379 chainNetHg19,238 chainNetHg19,382 nestedRepeats,118 netHg19,235 netHg19,379 rmsk,140 transMapEnsemblV5,52 transMapEnsemblV5,278 transMapEstV5,247 transMapRefSeqV5,247 transMapRnaV5,247 transMapV5,353 uniprot,486 uniprot,528 uniprot,540 full-length refSeqComposite,265 functional evaSnp4,254 evaSnp4,286 evaSnp4,295 evaSnp4,427 evaSnp4,827 evaSnp5,254 evaSnp5,286 evaSnp5,295 evaSnp5,427 evaSnp5,827 fund animalQtl,272 furthermore augustusGene,64 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 ensGene,175 evaSnp4,548 evaSnp4,595 evaSnp4,1171 evaSnp5,548 evaSnp5,595 evaSnp5,1171 gc5BaseBw,20 microsat,115 refSeqComposite,900 refSeqComposite,952 refSeqComposite,1076 simpleRepeat,75 g-31-125100-114 chainHg19,670 chainNetHg19,673 netHg19,670 ga evaSnp4,545 evaSnp5,545 galgal5 evaSnp4,921 evaSnp5,921 gambiae augustusGene,219 gap chainHg19,76 chainHg19,86 chainHg19,185 chainHg19,472 chainHg19,484 chainHg19,507 chainHg19,525 chainHg19,540 chainHg19,557 chainHg19,694 chainHg19,825 chainNetHg19,79 chainNetHg19,89 chainNetHg19,188 chainNetHg19,475 chainNetHg19,487 chainNetHg19,510 chainNetHg19,528 chainNetHg19,543 chainNetHg19,560 chainNetHg19,697 chainNetHg19,828 est,427 gap,1 gap,2 gap,90 gap,101 gap,114 intronEst,508 mrna,366 netHg19,76 netHg19,86 netHg19,185 netHg19,472 netHg19,484 netHg19,507 netHg19,525 netHg19,540 netHg19,557 netHg19,694 netHg19,825 refSeqComposite,926 refSeqComposite,959 refSeqComposite,1015 refSeqComposite,1017 transMapEnsemblV5,141 transMapEstV5,110 transMapRefSeqV5,110 transMapRnaV5,110 transMapV5,216 xenoMrna,441 gapless chainHg19,637 chainNetHg19,640 netHg19,637 gaps chainHg19,82 chainHg19,93 chainHg19,104 chainHg19,138 chainHg19,162 chainHg19,207 chainHg19,218 chainHg19,399 chainHg19,421 chainHg19,448 chainHg19,880 chainHg19,886 chainNetHg19,85 chainNetHg19,96 chainNetHg19,107 chainNetHg19,141 chainNetHg19,165 chainNetHg19,210 chainNetHg19,221 chainNetHg19,402 chainNetHg19,424 chainNetHg19,451 chainNetHg19,883 chainNetHg19,889 gap,12 gap,42 gap,67 gap,123 gap,125 gold,95 netHg19,82 netHg19,93 netHg19,104 netHg19,138 netHg19,162 netHg19,207 netHg19,218 netHg19,399 netHg19,421 netHg19,448 netHg19,880 netHg19,886 refSeqComposite,929 refSeqComposite,1020 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gasteiger uniprot,2020 gattiker uniprot,2016 gbdb evaSnp4,1116 evaSnp5,1116 refSeqComposite,1548 transMapEnsemblV5,661 transMapEstV5,630 transMapRefSeqV5,630 transMapRnaV5,630 transMapV5,736 uniprot,1815 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 evaSnp4,651 evaSnp5,651 gc5BaseBw,1 gc5BaseBw,3 gc5BaseBw,13 gc5BaseBw,30 genbank est,22 est,646 est,757 est,781 intronEst,24 intronEst,727 intronEst,841 intronEst,865 mrna,6 mrna,20 mrna,384 mrna,474 mrna,498 transMapEnsemblV5,171 transMapEnsemblV5,174 transMapEstV5,16 transMapEstV5,140 transMapEstV5,143 transMapRefSeqV5,140 transMapRefSeqV5,143 transMapRnaV5,4 transMapRnaV5,17 transMapRnaV5,140 transMapRnaV5,143 transMapV5,246 transMapV5,249 uniprot,376 xenoMrna,6 xenoMrna,23 xenoMrna,549 xenoMrna,573 gencode transMapEnsemblV5,6 transMapEnsemblV5,18 transMapEnsemblV5,38 transMapEnsemblV5,707 transMapEstV5,676 transMapRefSeqV5,676 transMapRnaV5,676 transMapV5,782 uniprot,730 gene animalQtl,34 animalQtl,153 augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 ensGene,7 ensGene,11 ensGene,23 ensGene,39 ensGene,58 ensGene,155 evaSnp4,381 evaSnp4,387 evaSnp4,1157 evaSnp5,381 evaSnp5,387 evaSnp5,1157 genscan,4 genscan,8 genscan,55 genscan,72 genscan,111 genscan,117 genscan,214 ncbiRefSeq,17 ncbiRefSeqCurated,15 ncbiRefSeqGenomicDiff,14 ncbiRefSeqOther,17 ncbiRefSeqPredicted,13 ncbiRefSeqPsl,9 refGene,13 refGene,49 refGene,75 refGene,92 refGene,146 refGene,161 refGene,166 refGene,194 refGene,223 refSeqComposite,9 refSeqComposite,108 refSeqComposite,134 refSeqComposite,410 refSeqComposite,540 refSeqComposite,558 refSeqComposite,599 refSeqComposite,767 refSeqComposite,785 refSeqComposite,797 refSeqComposite,828 refSeqComposite,857 transMapEnsemblV5,12 transMapEnsemblV5,53 transMapEnsemblV5,59 transMapEnsemblV5,390 transMapEnsemblV5,773 transMapEstV5,10 transMapEstV5,359 transMapEstV5,742 transMapRefSeqV5,5 transMapRefSeqV5,11 transMapRefSeqV5,18 transMapRefSeqV5,359 transMapRefSeqV5,742 transMapRnaV5,11 transMapRnaV5,359 transMapRnaV5,742 transMapV5,9 transMapV5,17 transMapV5,465 transMapV5,848 unipAliSwissprot,20 unipAliTrembl,12 unipChain,10 unipConflict,8 unipDisulfBond,8 unipDomain,6 unipInterest,8 unipLocCytopl,7 unipLocExtra,7 unipLocSignal,8 unipLocTransMemb,7 unipModif,9 unipMut,8 unipOther,8 unipRepeat,6 unipStruct,10 uniprot,9 uniprot,732 uniprot,1025 uniprot,1050 uniprot,1059 uniprot,1080 uniprot,1281 uniprot,1394 xenoRefGene,8 xenoRefGene,52 xenoRefGene,106 xenoRefGene,121 xenoRefGene,126 xenoRefGene,154 xenoRefGene,183 gene-rich gc5BaseBw,36 genedb animalQtl,223 genedx uniprot,1973 genepred ensGene,76 refSeqComposite,1173 refSeqComposite,1402 refSeqComposite,1577 genepredtogtf refSeqComposite,1589 refSeqComposite,1612 refSeqComposite,1619 general est,529 evaSnp4,298 evaSnp5,298 intronEst,610 generally rmsk,72 uniprot,248 generate est,640 intronEst,721 nestedRepeats,261 nestedRepeats,320 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 ensGene,14 nestedRepeats,282 refGene,328 refSeqComposite,481 refSeqComposite,1199 refSeqComposite,1715 rmsk,289 xenoRefGene,288 generating augustusGene,189 genes animalQtl,77 augustusGene,8 augustusGene,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 ensGene,2 ensGene,4 ensGene,5 ensGene,27 ensGene,92 est,42 evaSnp4,401 evaSnp4,730 evaSnp5,401 evaSnp5,730 genscan,2 genscan,6 genscan,59 intronEst,54 ncbiRefSeq,5 ncbiRefSeq,15 ncbiRefSeqCurated,5 ncbiRefSeqCurated,13 ncbiRefSeqGenomicDiff,12 ncbiRefSeqOther,15 ncbiRefSeqPredicted,5 ncbiRefSeqPredicted,11 ncbiRefSeqPsl,7 refGene,11 refGene,18 refGene,26 refGene,79 refGene,232 refGene,240 refGene,251 refSeqComposite,4 refSeqComposite,7 refSeqComposite,15 refSeqComposite,23 refSeqComposite,138 refSeqComposite,237 refSeqComposite,431 refSeqComposite,506 refSeqComposite,1211 refSeqComposite,1222 simpleRepeat,41 transMapEnsemblV5,10 transMapEnsemblV5,88 transMapEnsemblV5,170 transMapEnsemblV5,184 transMapEnsemblV5,290 transMapEnsemblV5,803 transMapEstV5,8 transMapEstV5,57 transMapEstV5,139 transMapEstV5,153 transMapEstV5,259 transMapEstV5,772 transMapRefSeqV5,9 transMapRefSeqV5,57 transMapRefSeqV5,139 transMapRefSeqV5,153 transMapRefSeqV5,259 transMapRefSeqV5,772 transMapRnaV5,9 transMapRnaV5,57 transMapRnaV5,139 transMapRnaV5,153 transMapRnaV5,259 transMapRnaV5,772 transMapV5,7 transMapV5,58 transMapV5,72 transMapV5,245 transMapV5,259 transMapV5,365 transMapV5,878 unipAliSwissprot,18 unipAliTrembl,10 unipChain,8 unipConflict,6 unipDisulfBond,6 unipDomain,4 unipInterest,6 unipLocCytopl,5 unipLocExtra,5 unipLocSignal,6 unipLocTransMemb,5 unipModif,7 unipMut,6 unipOther,6 unipRepeat,4 unipStruct,8 uniprot,7 uniprot,1300 xenoRefGene,5 xenoRefGene,6 xenoRefGene,18 xenoRefGene,192 xenoRefGene,200 xenoRefGene,211 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic evaSnp4,6 evaSnp5,6 nestedRepeats,52 rmsk,88 genetics animalQtl,354 genome animalQtl,72 animalQtl,312 animalQtl,427 augustusGene,31 chainHg19,19 chainHg19,73 chainHg19,202 chainHg19,275 chainHg19,288 chainHg19,779 chainHg19,1100 chainNetHg19,22 chainNetHg19,76 chainNetHg19,205 chainNetHg19,278 chainNetHg19,291 chainNetHg19,782 chainNetHg19,1103 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ensGene,164 ensGene,192 est,25 est,651 est,804 evaSnp4,44 evaSnp4,1061 evaSnp5,44 evaSnp5,1061 gap,18 gap,20 gold,20 gold,22 gold,150 intronEst,27 intronEst,37 intronEst,732 intronEst,888 mrna,23 mrna,391 mrna,521 ncbiRefSeqGenomicDiff,11 nestedRepeats,405 netHg19,19 netHg19,73 netHg19,202 netHg19,275 netHg19,288 netHg19,779 netHg19,1100 refGene,263 refGene,347 refSeqComposite,56 refSeqComposite,290 refSeqComposite,298 refSeqComposite,307 refSeqComposite,325 refSeqComposite,369 refSeqComposite,442 refSeqComposite,464 refSeqComposite,496 refSeqComposite,877 refSeqComposite,924 refSeqComposite,974 refSeqComposite,1060 refSeqComposite,1073 refSeqComposite,1107 refSeqComposite,1120 refSeqComposite,1182 refSeqComposite,1231 refSeqComposite,1445 refSeqComposite,1734 rmsk,428 transMapEnsemblV5,36 transMapEnsemblV5,163 transMapEnsemblV5,180 transMapEnsemblV5,204 transMapEnsemblV5,333 transMapEnsemblV5,344 transMapEnsemblV5,405 transMapEnsemblV5,415 transMapEnsemblV5,449 transMapEnsemblV5,472 transMapEnsemblV5,605 transMapEnsemblV5,743 transMapEstV5,34 transMapEstV5,132 transMapEstV5,149 transMapEstV5,173 transMapEstV5,302 transMapEstV5,313 transMapEstV5,374 transMapEstV5,384 transMapEstV5,418 transMapEstV5,441 transMapEstV5,574 transMapEstV5,712 transMapRefSeqV5,34 transMapRefSeqV5,132 transMapRefSeqV5,149 transMapRefSeqV5,173 transMapRefSeqV5,302 transMapRefSeqV5,313 transMapRefSeqV5,374 transMapRefSeqV5,384 transMapRefSeqV5,418 transMapRefSeqV5,441 transMapRefSeqV5,574 transMapRefSeqV5,712 transMapRnaV5,34 transMapRnaV5,132 transMapRnaV5,149 transMapRnaV5,173 transMapRnaV5,302 transMapRnaV5,313 transMapRnaV5,374 transMapRnaV5,384 transMapRnaV5,418 transMapRnaV5,441 transMapRnaV5,574 transMapRnaV5,712 transMapV5,33 transMapV5,84 transMapV5,238 transMapV5,255 transMapV5,279 transMapV5,408 transMapV5,419 transMapV5,480 transMapV5,490 transMapV5,524 transMapV5,547 transMapV5,680 transMapV5,818 ucscToRefSeq,13 unipAliSwissprot,9 unipAliTrembl,9 uniprot,88 uniprot,103 uniprot,120 uniprot,203 uniprot,216 uniprot,609 uniprot,642 uniprot,717 uniprot,749 uniprot,803 uniprot,811 uniprot,910 uniprot,1141 uniprot,1377 uniprot,1494 uniprot,1520 uniprot,1543 uniprot,1730 uniprot,1847 uniprot,1858 uniprot,1891 xenoMrna,466 xenoMrna,596 xenoRefGene,223 xenoRefGene,306 genome-wide refSeqComposite,1497 genome.bed uniprot,1935 uniprot,1937 genomes animalQtl,45 chainHg19,25 chainHg19,582 chainHg19,1062 chainNetHg19,28 chainNetHg19,585 chainNetHg19,1065 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netHg19,25 netHg19,582 netHg19,1062 refGene,416 refSeqComposite,569 refSeqComposite,1803 rmsk,392 rmsk,406 transMapEnsemblV5,361 transMapEnsemblV5,369 transMapEstV5,330 transMapEstV5,338 transMapRefSeqV5,330 transMapRefSeqV5,338 transMapRnaV5,330 transMapRnaV5,338 transMapV5,436 transMapV5,444 uniprot,863 uniprot,941 windowmaskerSdust,105 xenoRefGene,375 genomic animalQtl,424 chainHg19,491 chainHg19,1014 chainHg19,1030 chainNetHg19,494 chainNetHg19,1017 chainNetHg19,1033 est,88 est,406 est,607 est,717 evaSnp4,197 evaSnp4,876 evaSnp4,886 evaSnp4,916 evaSnp4,1190 evaSnp5,197 evaSnp5,876 evaSnp5,886 evaSnp5,916 evaSnp5,1190 genscan,92 genscan,218 intronEst,72 intronEst,169 intronEst,487 intronEst,688 intronEst,798 mrna,343 mrna,433 netHg19,491 netHg19,1014 netHg19,1030 refGene,202 refGene,313 refSeqComposite,836 refSeqComposite,904 refSeqComposite,928 refSeqComposite,1019 refSeqComposite,1077 refSeqComposite,1281 transMapEnsemblV5,127 transMapEstV5,96 transMapRefSeqV5,96 transMapRnaV5,96 transMapV5,202 uniprot,28 uniprot,450 windowmaskerSdust,3 xenoMrna,100 xenoMrna,418 xenoMrna,508 xenoRefGene,162 xenoRefGene,273 genomics chainHg19,11 chainNetHg19,14 chainNetHg19Viewchain,12 chainNetHg19Viewnet,12 netHg19,11 transMapEnsemblV5,742 transMapEnsemblV5,797 transMapEstV5,711 transMapEstV5,766 transMapRefSeqV5,711 transMapRefSeqV5,766 transMapRnaV5,711 transMapRnaV5,766 transMapV5,817 transMapV5,872 genotypes animalQtl,338 genscan genscan,1 genscan,3 genscan,17 genscan,136 genscan,177 genuine intronEst,111 germany animalQtl,360 gertz windowmaskerSdust,92 gff refSeqComposite,1166 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 github uniprot,1559 give transMapEnsemblV5,437 transMapEstV5,406 transMapRefSeqV5,406 transMapRnaV5,406 transMapV5,512 xenoMrna,110 given evaSnp4,1110 evaSnp5,1110 refSeqComposite,1537 transMapEnsemblV5,481 transMapEnsemblV5,654 transMapEstV5,450 transMapEstV5,623 transMapRefSeqV5,450 transMapRefSeqV5,623 transMapRnaV5,450 transMapRnaV5,623 transMapV5,556 transMapV5,729 uniprot,741 uniprot,1235 uniprot,1240 uniprot,1808 gkab960 evaSnp4,1201 evaSnp4,1205 evaSnp5,1201 evaSnp5,1205 global transMapEnsemblV5,354 transMapEstV5,323 transMapRefSeqV5,323 transMapRnaV5,323 transMapV5,429 glyco uniprot,469 glycosylation uniprot,341 uniprot,584 gnomon refSeqComposite,374 go est,414 est,435 genscan,113 intronEst,495 intronEst,516 mrna,351 mrna,374 refGene,219 refSeqComposite,853 uniprot,1412 xenoMrna,426 xenoMrna,449 xenoRefGene,179 gold gold,90 gold,104 goldenpath uniprot,1907 gr refGene,361 refSeqComposite,1748 xenoRefGene,320 graph evaSnp4,173 evaSnp5,173 gc5BaseBw,59 gc5BaseBw,78 graphical chainHg19,438 chainNetHg19,441 evaSnp4,59 evaSnp4,214 evaSnp5,59 evaSnp5,214 gold,129 netHg19,438 rmsk,211 grch37 chainHg19,6 chainHg19,68 chainHg19,302 chainNetHg19,7 chainNetHg19,71 chainNetHg19,305 chainNetHg19Viewchain,5 chainNetHg19Viewnet,5 netHg19,6 netHg19,68 netHg19,302 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 uniprot,588 uniprot,593 group augustusGene,198 augustusGene,235 chainHg19,629 chainNetHg19,632 netHg19,629 refSeqComposite,387 refSeqComposite,447 uniprot,430 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 evaSnp4,598 evaSnp4,898 evaSnp4,910 evaSnp5,598 evaSnp5,898 evaSnp5,910 intronEst,88 uniprot,907 uniprot,909 uniprot,1930 gtf ensGene,96 refSeqComposite,1563 refSeqComposite,1573 refSeqComposite,1585 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5BaseBw,21 gwas animalQtl,35 animalQtl,154 h uniprot,2013 had transMapEnsemblV5,194 transMapEstV5,163 transMapRefSeqV5,163 transMapRnaV5,163 transMapV5,269 haeussler uniprot,1945 handful uniprot,1180 haplotype uniprot,852 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainHg19,933 chainHg19,1090 chainNetHg19,936 chainNetHg19,1093 netHg19,933 netHg19,1090 harris chainHg19,1007 chainNetHg19,1010 netHg19,1007 hart refGene,372 refSeqComposite,1759 xenoRefGene,331 has animalQtl,264 est,114 intronEst,195 mrna,60 nestedRepeats,246 refGene,106 refSeqComposite,613 refSeqComposite,634 refSeqComposite,670 refSeqComposite,682 refSeqComposite,695 refSeqComposite,814 transMapV5,145 uniprot,33 uniprot,46 uniprot,154 uniprot,606 uniprot,1195 uniprot,1232 uniprot,1381 xenoMrna,135 xenoRefGene,66 haussler augustusGene,292 chainHg19,968 chainHg19,1048 chainHg19,1092 chainNetHg19,971 chainNetHg19,1051 chainNetHg19,1095 evaSnp4,1232 evaSnp5,1232 netHg19,968 netHg19,1048 netHg19,1092 transMapEnsemblV5,760 transMapEnsemblV5,794 transMapEstV5,729 transMapEstV5,763 transMapRefSeqV5,729 transMapRefSeqV5,763 transMapRnaV5,729 transMapRnaV5,763 transMapV5,835 transMapV5,869 have chainHg19,567 chainNetHg19,570 evaSnp4,337 evaSnp4,672 evaSnp5,337 evaSnp5,672 intronEst,6 intronEst,87 nestedRepeats,88 netHg19,567 rmsk,69 rmsk,108 uniprot,170 uniprot,302 uniprot,942 uniprot,1000 uniprot,1042 uniprot,1444 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 est,690 est,699 intronEst,771 intronEst,780 mrna,406 mrna,415 refGene,286 refGene,295 refSeqComposite,1254 refSeqComposite,1263 xenoMrna,480 xenoMrna,490 xenoRefGene,246 xenoRefGene,255 heavily uniprot,1533 helices uniprot,366 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 ensGene,126 gc5BaseBw,61 refGene,65 refSeqComposite,124 helped animalQtl,217 helpful est,142 intronEst,223 mrna,88 xenoMrna,163 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 hence xenoMrna,89 here evaSnp4,1097 evaSnp5,1097 refSeqComposite,990 refSeqComposite,1193 refSeqComposite,1464 refSeqComposite,1486 refSeqComposite,1680 rmsk,127 transMapEnsemblV5,136 transMapEnsemblV5,150 transMapEnsemblV5,641 transMapEstV5,105 transMapEstV5,119 transMapEstV5,610 transMapRefSeqV5,105 transMapRefSeqV5,119 transMapRefSeqV5,610 transMapRnaV5,105 transMapRnaV5,119 transMapRnaV5,610 transMapV5,211 transMapV5,225 transMapV5,716 uniprot,1795 xenoMrna,84 hg.conf refSeqComposite,1635 hg19 chainHg19,7 chainHg19,69 chainHg19,303 chainNetHg19,8 chainNetHg19,72 chainNetHg19,306 chainNetHg19Viewchain,6 chainNetHg19Viewnet,6 netHg19,7 netHg19,69 netHg19,303 refSeqComposite,570 uniprot,847 uniprot,860 hg38 refSeqComposite,514 refSeqComposite,572 uniprot,700 uniprot,843 uniprot,1177 uniprot,1367 uniprot,1909 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 evaSnp4,1115 evaSnp5,1115 refSeqComposite,1547 transMapEnsemblV5,660 transMapEstV5,629 transMapRefSeqV5,629 transMapRnaV5,629 transMapV5,735 uniprot,1814 uniprot,1906 uniprot,1916 hgmd refSeqComposite,546 hgvs refSeqComposite,899 refSeqComposite,912 refSeqComposite,951 refSeqComposite,980 refSeqComposite,1039 refSeqComposite,1066 refSeqComposite,1070 refSeqComposite,1090 hgvs.p evaSnp4,333 evaSnp4,354 evaSnp5,333 evaSnp5,354 hiatt refGene,362 refSeqComposite,1749 xenoRefGene,321 hidden augustusGene,324 uniprot,182 uniprot,223 hide refGene,230 refSeqComposite,174 uniprot,659 uniprot,667 xenoRefGene,190 hierarchy chainHg19,816 chainNetHg19,819 netHg19,816 high gc5BaseBw,29 transMapV5,118 higher chainHg19,848 chainNetHg19,851 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netHg19,848 rmsk,230 transMapV5,146 higher-level chainHg19,865 chainNetHg19,868 netHg19,865 higher-scoring chainHg19,809 chainHg19,828 chainNetHg19,812 chainNetHg19,831 netHg19,809 netHg19,828 highest est,692 intronEst,773 mrna,408 refGene,288 refSeqComposite,1256 uniprot,948 uniprot,1113 xenoMrna,482 xenoRefGene,248 highest-scoring chainHg19,390 chainHg19,775 chainNetHg19,393 chainNetHg19,778 netHg19,390 netHg19,775 highlight est,333 gc5BaseBw,49 intronEst,414 mrna,279 xenoMrna,354 highlighted est,303 est,321 intronEst,384 intronEst,402 mrna,249 mrna,267 uniprot,580 xenoMrna,324 xenoMrna,342 highly microsat,40 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainHg19,1044 chainNetHg19,1047 evaSnp4,847 evaSnp4,1214 evaSnp5,847 evaSnp5,1214 netHg19,1044 hiram gc5BaseBw,82 ucscToRefSeq,45 his chainHg19,942 chainNetHg19,945 netHg19,942 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 horse animalQtl,104 hosts evaSnp4,52 evaSnp5,52 hou chainHg19,921 chainNetHg19,924 netHg19,921 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainHg19,876 chainHg19,893 chainNetHg19,879 chainNetHg19,896 evaSnp4,970 evaSnp5,970 netHg19,876 netHg19,893 refSeqComposite,96 rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 transMapEnsemblV5,485 transMapEstV5,454 transMapRefSeqV5,454 transMapRnaV5,454 transMapV5,560 hox refSeqComposite,414 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 refSeqComposite,1546 rmsk,355 transMapEnsemblV5,659 transMapEstV5,628 transMapRefSeqV5,628 transMapRnaV5,628 transMapV5,734 uniprot,1813 https evaSnp4,1114 evaSnp5,1114 uniprot,1905 uniprot,1915 hu animalQtl,187 animalQtl,288 animalQtl,320 animalQtl,364 animalQtl,402 hub uniprot,711 uniprot,1672 uniprot,1679 hubbard ensGene,44 ensGene,168 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 hum uniprot,2043 human augustusGene,205 augustusGene,210 augustusGene,276 chainHg19,1 chainHg19,3 chainHg19,65 chainHg19,96 chainHg19,148 chainHg19,266 chainHg19,291 chainHg19,572 chainHg19,620 chainHg19,1061 chainNetHg19,1 chainNetHg19,4 chainNetHg19,68 chainNetHg19,99 chainNetHg19,151 chainNetHg19,269 chainNetHg19,294 chainNetHg19,575 chainNetHg19,623 chainNetHg19,1064 chainNetHg19Viewchain,2 chainNetHg19Viewnet,2 genscan,217 nestedRepeats,404 netHg19,1 netHg19,3 netHg19,65 netHg19,96 netHg19,148 netHg19,266 netHg19,291 netHg19,572 netHg19,620 netHg19,1061 refSeqComposite,245 refSeqComposite,297 refSeqComposite,557 refSeqComposite,568 refSeqComposite,1072 rmsk,427 transMapEnsemblV5,42 transMapEnsemblV5,362 transMapEnsemblV5,471 transMapEnsemblV5,738 transMapEnsemblV5,806 transMapEstV5,331 transMapEstV5,440 transMapEstV5,707 transMapEstV5,775 transMapRefSeqV5,331 transMapRefSeqV5,440 transMapRefSeqV5,707 transMapRefSeqV5,775 transMapRnaV5,331 transMapRnaV5,440 transMapRnaV5,707 transMapRnaV5,775 transMapV5,104 transMapV5,133 transMapV5,437 transMapV5,546 transMapV5,813 transMapV5,881 uniprot,699 uniprot,940 uniprot,2040 human-mouse chainHg19,1096 chainNetHg19,1099 netHg19,1096 hunt evaSnp4,1164 evaSnp5,1164 hybridizes est,497 intronEst,578 i est,750 est,774 intronEst,834 intronEst,858 mrna,467 mrna,491 xenoMrna,542 xenoMrna,566 i.e animalQtl,27 intronEst,70 icon refSeqComposite,750 id nestedRepeats,10 nestedRepeats,106 refSeqComposite,1129 uniprot,1026 uniprot,1051 uniprot,1060 uniprot,1282 identical uniprot,1106 uniprot,1144 uniprot,1147 identified chainHg19,937 chainNetHg19,940 est,696 intronEst,777 netHg19,937 refGene,292 refSeqComposite,1260 transMapEnsemblV5,512 transMapEstV5,481 transMapRefSeqV5,481 transMapRnaV5,481 transMapV5,587 xenoRefGene,252 identifier evaSnp4,193 evaSnp5,193 refSeqComposite,781 refSeqComposite,800 transMapEnsemblV5,483 transMapEstV5,452 transMapRefSeqV5,452 transMapRnaV5,452 transMapV5,558 identifiers transMapEnsemblV5,384 transMapEnsemblV5,443 transMapEnsemblV5,461 transMapEstV5,353 transMapEstV5,412 transMapEstV5,430 transMapRefSeqV5,353 transMapRefSeqV5,412 transMapRefSeqV5,430 transMapRnaV5,353 transMapRnaV5,412 transMapRnaV5,430 transMapV5,459 transMapV5,518 transMapV5,536 ucscToRefSeq,19 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 identity est,694 est,702 est,714 intronEst,775 intronEst,783 intronEst,795 microsat,71 mrna,410 mrna,418 mrna,430 nestedRepeats,187 nestedRepeats,222 refGene,290 refGene,298 refGene,310 refSeqComposite,1258 refSeqComposite,1266 refSeqComposite,1278 xenoMrna,484 xenoMrna,493 xenoMrna,505 xenoRefGene,250 xenoRefGene,258 xenoRefGene,270 ideogram cytoBandIdeo,3 cytoBandIdeo,4 ids uniprot,1292 if est,276 est,288 est,304 est,340 est,357 evaSnp4,250 evaSnp4,397 evaSnp4,408 evaSnp5,250 evaSnp5,397 evaSnp5,408 gap,76 intronEst,357 intronEst,369 intronEst,385 intronEst,421 intronEst,438 mrna,222 mrna,234 mrna,250 mrna,286 mrna,303 nestedRepeats,137 refGene,243 transMapEnsemblV5,244 transMapEstV5,213 transMapRefSeqV5,213 transMapRnaV5,213 transMapV5,319 uniprot,602 uniprot,688 uniprot,1030 uniprot,1077 uniprot,1230 uniprot,1261 uniprot,1323 uniprot,1442 xenoMrna,297 xenoMrna,309 xenoMrna,325 xenoMrna,361 xenoMrna,378 xenoRefGene,203 ignored refSeqComposite,1451 uniprot,1426 ii215-25 augustusGene,338 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 implemented animalQtl,178 important uniprot,900 improve augustusGene,302 transMapEnsemblV5,770 transMapEstV5,739 transMapRefSeqV5,739 transMapRnaV5,739 transMapV5,845 improved animalQtl,375 chainHg19,1010 chainNetHg19,1013 netHg19,1010 in animalQtl,90 animalQtl,94 animalQtl,98 animalQtl,102 animalQtl,106 animalQtl,169 animalQtl,179 animalQtl,250 animalQtl,255 animalQtl,385 augustusGene,101 chainHg19,31 chainHg19,94 chainHg19,114 chainHg19,146 chainHg19,153 chainHg19,167 chainHg19,186 chainHg19,189 chainHg19,228 chainHg19,249 chainHg19,294 chainHg19,327 chainHg19,357 chainHg19,369 chainHg19,378 chainHg19,396 chainHg19,401 chainHg19,410 chainHg19,422 chainHg19,436 chainHg19,478 chainHg19,495 chainHg19,526 chainHg19,544 chainHg19,558 chainHg19,593 chainHg19,689 chainHg19,777 chainHg19,818 chainHg19,826 chainHg19,842 chainHg19,875 chainHg19,887 chainHg19,1057 chainNetHg19,34 chainNetHg19,97 chainNetHg19,117 chainNetHg19,149 chainNetHg19,156 chainNetHg19,170 chainNetHg19,189 chainNetHg19,192 chainNetHg19,231 chainNetHg19,252 chainNetHg19,297 chainNetHg19,330 chainNetHg19,360 chainNetHg19,372 chainNetHg19,381 chainNetHg19,399 chainNetHg19,404 chainNetHg19,413 chainNetHg19,425 chainNetHg19,439 chainNetHg19,481 chainNetHg19,498 chainNetHg19,529 chainNetHg19,547 chainNetHg19,561 chainNetHg19,596 chainNetHg19,692 chainNetHg19,780 chainNetHg19,821 chainNetHg19,829 chainNetHg19,845 chainNetHg19,878 chainNetHg19,890 chainNetHg19,1060 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ensGene,37 ensGene,50 ensGene,83 ensGene,90 ensGene,95 est,21 est,34 est,57 est,148 est,169 est,192 est,202 est,220 est,273 est,395 est,528 est,576 est,685 evaSnp4,95 evaSnp4,155 evaSnp4,212 evaSnp4,329 evaSnp4,332 evaSnp4,345 evaSnp4,348 evaSnp4,441 evaSnp4,490 evaSnp4,509 evaSnp4,518 evaSnp4,559 evaSnp4,568 evaSnp4,604 evaSnp4,754 evaSnp4,879 evaSnp4,919 evaSnp4,1036 evaSnp5,95 evaSnp5,155 evaSnp5,212 evaSnp5,329 evaSnp5,332 evaSnp5,345 evaSnp5,348 evaSnp5,441 evaSnp5,490 evaSnp5,509 evaSnp5,518 evaSnp5,559 evaSnp5,568 evaSnp5,604 evaSnp5,754 evaSnp5,879 evaSnp5,919 evaSnp5,1036 gap,13 gap,25 gap,43 gap,73 gap,128 gc5BaseBw,5 gc5BaseBw,26 gc5BaseBw,43 genscan,101 genscan,150 genscan,162 genscan,165 genscan,184 genscan,188 genscan,198 genscan,216 gold,15 gold,27 gold,78 gold,127 gold,138 gold,146 intronEst,23 intronEst,46 intronEst,84 intronEst,98 intronEst,141 intronEst,229 intronEst,250 intronEst,273 intronEst,283 intronEst,301 intronEst,354 intronEst,476 intronEst,609 intronEst,657 intronEst,766 intronEst,802 microsat,42 microsat,49 mrna,19 mrna,38 mrna,94 mrna,115 mrna,138 mrna,148 mrna,166 mrna,219 mrna,401 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netHg19,31 netHg19,94 netHg19,114 netHg19,146 netHg19,153 netHg19,167 netHg19,186 netHg19,189 netHg19,228 netHg19,249 netHg19,294 netHg19,327 netHg19,357 netHg19,369 netHg19,378 netHg19,396 netHg19,401 netHg19,410 netHg19,422 netHg19,436 netHg19,478 netHg19,495 netHg19,526 netHg19,544 netHg19,558 netHg19,593 netHg19,689 netHg19,777 netHg19,818 netHg19,826 netHg19,842 netHg19,875 netHg19,887 netHg19,1057 refGene,281 refSeqComposite,61 refSeqComposite,277 refSeqComposite,396 refSeqComposite,756 refSeqComposite,988 refSeqComposite,1035 refSeqComposite,1062 refSeqComposite,1139 refSeqComposite,1165 refSeqComposite,1180 refSeqComposite,1249 refSeqComposite,1296 refSeqComposite,1340 refSeqComposite,1355 refSeqComposite,1364 refSeqComposite,1374 refSeqComposite,1384 refSeqComposite,1443 refSeqComposite,1452 refSeqComposite,1467 refSeqComposite,1475 refSeqComposite,1535 refSeqComposite,1620 refSeqComposite,1657 refSeqComposite,1663 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 transMapEnsemblV5,33 transMapEnsemblV5,82 transMapEnsemblV5,89 transMapEnsemblV5,160 transMapEnsemblV5,335 transMapEnsemblV5,359 transMapEnsemblV5,367 transMapEnsemblV5,402 transMapEnsemblV5,412 transMapEnsemblV5,446 transMapEnsemblV5,492 transMapEnsemblV5,542 transMapEnsemblV5,584 transMapEstV5,31 transMapEstV5,51 transMapEstV5,58 transMapEstV5,129 transMapEstV5,304 transMapEstV5,328 transMapEstV5,336 transMapEstV5,371 transMapEstV5,381 transMapEstV5,415 transMapEstV5,461 transMapEstV5,511 transMapEstV5,553 transMapRefSeqV5,31 transMapRefSeqV5,51 transMapRefSeqV5,58 transMapRefSeqV5,129 transMapRefSeqV5,304 transMapRefSeqV5,328 transMapRefSeqV5,336 transMapRefSeqV5,371 transMapRefSeqV5,381 transMapRefSeqV5,415 transMapRefSeqV5,461 transMapRefSeqV5,511 transMapRefSeqV5,553 transMapRnaV5,31 transMapRnaV5,51 transMapRnaV5,58 transMapRnaV5,129 transMapRnaV5,304 transMapRnaV5,328 transMapRnaV5,336 transMapRnaV5,371 transMapRnaV5,381 transMapRnaV5,415 transMapRnaV5,461 transMapRnaV5,511 transMapRnaV5,553 transMapV5,30 transMapV5,52 transMapV5,59 transMapV5,76 transMapV5,235 transMapV5,410 transMapV5,434 transMapV5,442 transMapV5,477 transMapV5,487 transMapV5,521 transMapV5,567 transMapV5,617 transMapV5,659 uniprot,67 uniprot,148 uniprot,161 uniprot,177 uniprot,242 uniprot,291 uniprot,313 uniprot,427 uniprot,505 uniprot,509 uniprot,570 uniprot,581 uniprot,586 uniprot,591 uniprot,737 uniprot,755 uniprot,854 uniprot,870 uniprot,882 uniprot,1066 uniprot,1132 uniprot,1151 uniprot,1171 uniprot,1190 uniprot,1199 uniprot,1252 uniprot,1258 uniprot,1272 uniprot,1466 uniprot,1637 uniprot,1663 uniprot,1734 uniprot,1752 uniprot,1849 uniprot,1864 windowmaskerSdust,27 xenoMrna,22 xenoMrna,43 xenoMrna,66 xenoMrna,169 xenoMrna,190 xenoMrna,213 xenoMrna,223 xenoMrna,241 xenoMrna,294 xenoMrna,475 xenoRefGene,241 include animalQtl,148 est,130 est,335 est,359 evaSnp4,226 evaSnp5,226 intronEst,211 intronEst,416 intronEst,440 mrna,76 mrna,281 mrna,305 refSeqComposite,187 rmsk,159 rmsk,172 xenoMrna,151 xenoMrna,356 xenoMrna,380 included augustusGene,160 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 windowmaskerSdust,26 includes refSeqComposite,216 refSeqComposite,262 refSeqComposite,346 refSeqComposite,648 rmsk,198 uniprot,1587 including est,5 intronEst,120 refSeqComposite,795 rmsk,188 uniprot,1700 inclusion refSeqComposite,395 inconsistency refSeqComposite,873 incorporate refSeqComposite,660 incorrect uniprot,1361 indels evaSnp4,31 evaSnp5,31 microsat,74 independently refSeqComposite,293 indexing refSeqComposite,1462 indicate chainHg19,137 chainHg19,243 chainNetHg19,140 chainNetHg19,246 est,68 mrna,49 nestedRepeats,153 netHg19,137 netHg19,243 xenoMrna,54 indicated evaSnp4,101 evaSnp5,101 indicates est,76 intronEst,147 intronEst,157 refGene,98 refSeqComposite,605 xenoMrna,71 xenoMrna,93 xenoRefGene,58 individual chainHg19,240 chainHg19,493 chainNetHg19,243 chainNetHg19,496 evaSnp4,182 evaSnp4,1056 evaSnp5,182 evaSnp5,1056 netHg19,240 netHg19,493 refSeqComposite,676 refSeqComposite,701 refSeqComposite,745 refSeqComposite,1490 transMapEnsemblV5,600 transMapEstV5,569 transMapRefSeqV5,569 transMapRnaV5,569 transMapV5,675 individuals animalQtl,128 information animalQtl,425 augustusGene,36 chainHg19,456 chainHg19,469 chainHg19,475 chainHg19,843 chainNetHg19,459 chainNetHg19,472 chainNetHg19,478 chainNetHg19,846 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 ensGene,19 ensGene,159 est,75 est,410 est,434 evaSnp4,968 evaSnp4,1026 evaSnp5,968 evaSnp5,1026 gap,34 gc5BaseBw,55 genscan,51 genscan,126 gold,36 intronEst,156 intronEst,491 intronEst,515 microsat,97 mrna,347 mrna,373 nestedRepeats,53 nestedRepeats,301 netHg19,456 netHg19,469 netHg19,475 netHg19,843 refGene,71 refGene,215 refSeqComposite,130 refSeqComposite,665 refSeqComposite,849 refSeqComposite,1184 refSeqComposite,1379 refSeqComposite,1383 rmsk,89 rmsk,324 simpleRepeat,58 transMapEnsemblV5,131 transMapEnsemblV5,148 transMapEnsemblV5,566 transMapEstV5,100 transMapEstV5,117 transMapEstV5,535 transMapRefSeqV5,100 transMapRefSeqV5,117 transMapRefSeqV5,535 transMapRnaV5,100 transMapRnaV5,117 transMapRnaV5,535 transMapV5,206 transMapV5,223 transMapV5,641 uniprot,678 uniprot,1842 uniprot,2038 xenoMrna,61 xenoMrna,422 xenoMrna,448 xenoRefGene,175 inframe_deletion evaSnp4,766 evaSnp5,766 inframe_insertion evaSnp4,767 evaSnp5,767 initial animalQtl,252 refSeqComposite,679 initiate rmsk,316 initiator_codon_variant evaSnp4,768 evaSnp5,768 initio augustusGene,4 augustusGene,17 input uniprot,1952 windowmaskerSdust,61 windowmaskerSdust,70 inserted chainHg19,569 chainHg19,899 chainNetHg19,572 chainNetHg19,902 evaSnp4,556 evaSnp5,556 netHg19,569 netHg19,899 insertion chainHg19,152 chainNetHg19,155 est,439 evaSnp4,549 evaSnp4,586 evaSnp5,549 evaSnp5,586 intronEst,520 mrna,378 netHg19,152 rmsk,223 xenoMrna,453 insertions evaSnp4,28 evaSnp4,99 evaSnp5,28 evaSnp5,99 nestedRepeats,86 nestedRepeats,92 refSeqComposite,945 inside uniprot,560 inspection uniprot,1653 instances evaSnp4,881 evaSnp5,881 instead refGene,158 refSeqComposite,782 xenoRefGene,118 institute nestedRepeats,55 rmsk,91 instructions ensGene,117 evaSnp4,1087 evaSnp5,1087 transMapEnsemblV5,631 transMapEstV5,600 transMapRefSeqV5,600 transMapRnaV5,600 transMapV5,706 uniprot,1785 integration animalQtl,418 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 ensGene,71 evaSnp4,263 evaSnp4,317 evaSnp4,435 evaSnp4,711 evaSnp4,846 evaSnp4,997 evaSnp4,1148 evaSnp4,1238 evaSnp4,1242 evaSnp5,263 evaSnp5,317 evaSnp5,435 evaSnp5,711 evaSnp5,846 evaSnp5,997 evaSnp5,1148 evaSnp5,1238 evaSnp5,1242 refSeqComposite,1312 transMapEnsemblV5,534 transMapEstV5,503 transMapRefSeqV5,503 transMapRnaV5,503 transMapV5,609 uniprot,1725 interactions uniprot,316 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 ensGene,63 evaSnp4,989 evaSnp5,989 refSeqComposite,1303 transMapEnsemblV5,526 transMapEstV5,495 transMapRefSeqV5,495 transMapRnaV5,495 transMapV5,601 uniprot,1717 interest unipInterest,1 unipInterest,5 uniprot,299 intergenic evaSnp4,465 evaSnp4,793 evaSnp5,465 evaSnp5,793 genscan,47 intergenic_variant evaSnp4,800 evaSnp5,800 international est,735 intronEst,819 mrna,452 transMapEnsemblV5,692 transMapEstV5,661 transMapRefSeqV5,661 transMapRnaV5,661 transMapV5,767 xenoMrna,527 internet nestedRepeats,279 interpreting evaSnp4,55 evaSnp5,55 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 intervals windowmaskerSdust,4 into animalQtl,221 chainHg19,599 chainHg19,611 chainHg19,627 chainHg19,802 chainNetHg19,602 chainNetHg19,614 chainNetHg19,630 chainNetHg19,805 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 est,252 est,457 est,464 est,609 evaSnp4,199 evaSnp4,297 evaSnp4,477 evaSnp5,199 evaSnp5,297 evaSnp5,477 intronEst,333 intronEst,538 intronEst,545 intronEst,690 mrna,198 netHg19,599 netHg19,611 netHg19,627 netHg19,802 uniprot,57 windowmaskerSdust,80 xenoMrna,273 intron augustusGene,88 augustusGene,330 est,658 intronEst,69 intronEst,739 intron_variant evaSnp4,799 evaSnp5,799 intronic evaSnp4,467 evaSnp4,795 evaSnp5,467 evaSnp5,795 introns chainHg19,56 chainNetHg19,59 est,675 genscan,45 intronEst,756 netHg19,56 refSeqComposite,936 refSeqComposite,1027 inv chainHg19,531 chainNetHg19,534 netHg19,531 inversions chainHg19,110 chainHg19,174 chainNetHg19,113 chainNetHg19,177 netHg19,110 netHg19,174 invertebrate xenoMrna,20 inverted chainHg19,861 chainNetHg19,864 netHg19,861 invisible refSeqComposite,1034 refSeqComposite,1061 invited animalQtl,341 involve chainHg19,164 chainNetHg19,167 netHg19,164 involved animalQtl,249 iowa animalQtl,199 animalQtl,245 animalQtl,284 is chainHg19,277 chainHg19,297 chainHg19,476 chainNetHg19,280 chainNetHg19,300 chainNetHg19,479 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 est,292 est,308 est,344 est,361 est,450 est,462 est,471 est,491 est,620 est,663 evaSnp4,140 evaSnp4,162 evaSnp4,169 evaSnp4,309 evaSnp4,323 evaSnp4,326 evaSnp4,493 evaSnp4,505 evaSnp4,512 evaSnp4,534 evaSnp4,555 evaSnp4,562 evaSnp4,584 evaSnp4,620 evaSnp4,638 evaSnp4,955 evaSnp4,1034 evaSnp4,1053 evaSnp5,140 evaSnp5,162 evaSnp5,169 evaSnp5,309 evaSnp5,323 evaSnp5,326 evaSnp5,493 evaSnp5,505 evaSnp5,512 evaSnp5,534 evaSnp5,555 evaSnp5,562 evaSnp5,584 evaSnp5,620 evaSnp5,638 evaSnp5,955 evaSnp5,1034 evaSnp5,1053 gap,46 gap,91 gap,98 gap,106 gc5BaseBw,32 gold,45 gold,119 gold,125 intronEst,102 intronEst,373 intronEst,389 intronEst,425 intronEst,442 intronEst,531 intronEst,543 intronEst,552 intronEst,572 intronEst,701 intronEst,744 microsat,88 mrna,238 mrna,254 mrna,290 mrna,307 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netHg19,277 netHg19,297 netHg19,476 refSeqComposite,146 refSeqComposite,242 refSeqComposite,316 refSeqComposite,533 refSeqComposite,563 refSeqComposite,574 refSeqComposite,710 refSeqComposite,1055 refSeqComposite,1198 refSeqComposite,1213 refSeqComposite,1429 refSeqComposite,1435 rmsk,95 rmsk,360 simpleRepeat,28 transMapEnsemblV5,39 transMapEnsemblV5,275 transMapEnsemblV5,418 transMapEnsemblV5,422 transMapEnsemblV5,434 transMapEnsemblV5,480 transMapEstV5,244 transMapEstV5,387 transMapEstV5,391 transMapEstV5,403 transMapEstV5,449 transMapRefSeqV5,244 transMapRefSeqV5,387 transMapRefSeqV5,391 transMapRefSeqV5,403 transMapRefSeqV5,449 transMapRnaV5,244 transMapRnaV5,387 transMapRnaV5,391 transMapRnaV5,403 transMapRnaV5,449 transMapV5,350 transMapV5,493 transMapV5,497 transMapV5,509 transMapV5,555 uniprot,159 uniprot,222 uniprot,417 uniprot,626 uniprot,707 uniprot,839 uniprot,911 uniprot,958 uniprot,972 uniprot,1052 uniprot,1081 uniprot,1209 uniprot,1245 uniprot,1256 uniprot,1264 uniprot,1283 uniprot,1334 uniprot,1390 uniprot,1564 uniprot,1578 uniprot,1603 uniprot,1630 uniprot,1732 windowmaskerSdust,25 windowmaskerSdust,39 xenoMrna,65 xenoMrna,119 xenoMrna,125 xenoMrna,313 xenoMrna,329 xenoMrna,365 xenoMrna,382 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isoform unipAliSwissprot,13 uniprot,157 uniprot,186 uniprot,671 isoforms unipAliSwissprot,17 uniprot,145 uniprot,164 isolated est,451 intronEst,532 issue animalQtl,396 est,765 est,791 intronEst,849 intronEst,875 mrna,482 mrna,508 refGene,394 refGene,428 refSeqComposite,1781 refSeqComposite,1815 uniprot,2004 xenoMrna,557 xenoMrna,583 xenoRefGene,353 xenoRefGene,387 it chainHg19,89 chainHg19,276 chainHg19,530 chainHg19,542 chainNetHg19,92 chainNetHg19,279 chainNetHg19,533 chainNetHg19,545 est,90 est,104 est,513 evaSnp4,954 evaSnp5,954 gap,97 genscan,143 intronEst,171 intronEst,185 intronEst,594 netHg19,89 netHg19,276 netHg19,530 netHg19,542 refSeqComposite,573 refSeqComposite,1299 uniprot,228 uniprot,625 uniprot,1586 item evaSnp4,211 evaSnp4,304 evaSnp5,211 evaSnp5,304 nestedRepeats,197 refGene,115 refSeqComposite,713 xenoRefGene,75 items chainHg19,494 chainNetHg19,497 est,62 est,135 est,145 est,339 evaSnp4,335 evaSnp4,371 evaSnp5,335 evaSnp5,371 intronEst,216 intronEst,226 intronEst,420 mrna,43 mrna,81 mrna,91 mrna,285 nestedRepeats,171 nestedRepeats,180 netHg19,494 refGene,142 refSeqComposite,763 refSeqComposite,962 refSeqComposite,1662 xenoMrna,48 xenoMrna,156 xenoMrna,166 xenoMrna,360 xenoRefGene,102 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 uniprot,230 uniprot,762 uniprot,1316 uniprot,1348 itself uniprot,715 j animalQtl,297 cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 ensGene,183 est,754 est,778 evaSnp4,1223 evaSnp5,1223 genscan,220 intronEst,838 intronEst,862 mrna,471 mrna,495 nestedRepeats,341 refGene,373 refSeqComposite,1760 rmsk,364 transMapEnsemblV5,785 transMapEstV5,754 transMapRefSeqV5,754 transMapRnaV5,754 transMapV5,860 xenoMrna,546 xenoMrna,570 xenoRefGene,332 james animalQtl,195 animalQtl,281 jan animalQtl,393 animalQtl,429 chainHg19,1103 chainNetHg19,1106 ensGene,199 est,762 est,787 intronEst,846 intronEst,871 microsat,129 mrna,479 mrna,504 netHg19,1103 refGene,391 refGene,424 refSeqComposite,1778 refSeqComposite,1811 simpleRepeat,89 uniprot,2001 windowmaskerSdust,108 xenoMrna,554 xenoMrna,579 xenoRefGene,350 xenoRefGene,383 jang animalQtl,211 animalQtl,292 jim chainHg19,959 chainHg19,986 chainHg19,1004 chainNetHg19,962 chainNetHg19,989 chainNetHg19,1007 netHg19,959 netHg19,986 netHg19,1004 jm animalQtl,301 animalQtl,328 animalQtl,371 animalQtl,405 john animalQtl,235 joined chainHg19,122 chainNetHg19,125 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netHg19,122 journal animalQtl,123 nestedRepeats,349 rmsk,372 json refSeqComposite,1356 refSeqComposite,1360 jul cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 jz transMapEnsemblV5,787 transMapEstV5,756 transMapRefSeqV5,756 transMapRnaV5,756 transMapV5,862 k augustusGene,268 est,748 evaSnp4,1177 evaSnp5,1177 intronEst,832 mrna,465 xenoMrna,540 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,148 genscan,209 karolchik evaSnp4,1224 evaSnp5,1224 karsch-mizrachi est,749 est,773 intronEst,833 intronEst,857 mrna,466 mrna,490 xenoMrna,541 xenoMrna,565 kasif genscan,193 kd refGene,359 refGene,401 refSeqComposite,1746 refSeqComposite,1788 xenoRefGene,318 xenoRefGene,360 kd-tree chainHg19,633 chainNetHg19,636 netHg19,633 kd-trees chainHg19,651 chainNetHg19,654 netHg19,651 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 uniprot,1486 kent chainHg19,960 chainHg19,987 chainHg19,1005 chainHg19,1040 chainHg19,1082 chainNetHg19,963 chainNetHg19,990 chainNetHg19,1008 chainNetHg19,1043 chainNetHg19,1085 est,797 evaSnp4,1234 evaSnp5,1234 intronEst,881 mrna,514 netHg19,960 netHg19,987 netHg19,1005 netHg19,1040 netHg19,1082 refGene,340 refSeqComposite,1727 xenoMrna,589 xenoRefGene,300 kept est,720 mrna,436 refGene,316 refSeqComposite,1284 xenoMrna,511 xenoRefGene,276 km refGene,377 refSeqComposite,1764 xenoRefGene,336 known chainHg19,910 chainNetHg19,913 gold,121 netHg19,910 refGene,21 refSeqComposite,501 xenoRefGene,14 koylass evaSnp4,1166 evaSnp5,1166 kr evaSnp4,1229 evaSnp5,1229 kuhn evaSnp4,1226 evaSnp5,1226 kumar evaSnp4,1168 evaSnp5,1168 l cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 ensGene,179 transMapEnsemblV5,719 transMapEstV5,688 transMapRefSeqV5,688 transMapRnaV5,688 transMapV5,794 lab augustusGene,252 label genscan,98 refGene,139 refGene,151 refGene,174 refSeqComposite,760 refSeqComposite,772 refSeqComposite,808 xenoRefGene,99 xenoRefGene,111 xenoRefGene,134 labeled nestedRepeats,132 refGene,144 refSeqComposite,765 uniprot,457 xenoRefGene,104 labeling est,384 intronEst,465 labels nestedRepeats,161 refGene,116 refSeqComposite,714 refSeqComposite,794 xenoRefGene,76 landrum refGene,374 refSeqComposite,1761 xenoRefGene,333 langton transMapEnsemblV5,718 transMapEstV5,687 transMapRefSeqV5,687 transMapRnaV5,687 transMapV5,793 largely chainHg19,141 chainNetHg19,144 netHg19,141 larger intronEst,149 largest chainHg19,389 chainNetHg19,392 netHg19,389 lastz chainHg19,586 chainHg19,759 chainHg19,908 chainNetHg19,589 chainNetHg19,762 chainNetHg19,911 netHg19,586 netHg19,759 netHg19,908 transMapV5,46 lau transMapEnsemblV5,730 transMapEstV5,699 transMapRefSeqV5,699 transMapRnaV5,699 transMapV5,805 lavtoaxt chainHg19,604 chainNetHg19,607 netHg19,604 least est,711 intronEst,66 intronEst,81 intronEst,792 microsat,29 microsat,78 mrna,427 refGene,307 refSeqComposite,1275 xenoMrna,502 xenoRefGene,267 lecture animalQtl,342 led animalQtl,279 lee uniprot,1955 left refSeqComposite,968 leipzig animalQtl,359 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 est,35 est,659 evaSnp4,616 evaSnp5,616 genscan,39 intronEst,47 intronEst,85 intronEst,740 less refGene,271 refSeqComposite,1239 transMapEnsemblV5,372 transMapEstV5,341 transMapRefSeqV5,341 transMapRnaV5,341 transMapV5,447 uniprot,680 xenoRefGene,231 level chainHg19,384 chainHg19,418 chainHg19,423 chainHg19,430 chainHg19,488 chainHg19,515 chainHg19,528 chainHg19,560 chainNetHg19,387 chainNetHg19,421 chainNetHg19,426 chainNetHg19,433 chainNetHg19,491 chainNetHg19,518 chainNetHg19,531 chainNetHg19,563 est,703 intronEst,95 intronEst,784 mrna,419 netHg19,384 netHg19,418 netHg19,423 netHg19,430 netHg19,488 netHg19,515 netHg19,528 netHg19,560 refGene,100 refGene,299 refSeqComposite,607 refSeqComposite,627 refSeqComposite,1267 rmsk,205 xenoMrna,494 xenoRefGene,60 xenoRefGene,259 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 evaSnp4,71 evaSnp5,71 libraries est,557 intronEst,638 nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 lifted uniprot,1492 lifting uniprot,1843 liftover evaSnp4,960 evaSnp5,960 uniprot,887 uniprot,1878 uniprot,1897 uniprot,1920 uniprot,1924 uniprot,1932 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 refGene,109 refSeqComposite,616 unipAliSwissprot,14 uniprot,506 uniprot,592 xenoRefGene,69 light-blue uniprot,178 lighter rmsk,237 like chainHg19,47 chainHg19,55 chainNetHg19,50 chainNetHg19,58 ensGene,148 netHg19,47 netHg19,55 refSeqComposite,82 refSeqComposite,1610 uniprot,1541 likely augustusGene,111 microsat,17 refSeqComposite,944 transMapV5,93 likewise evaSnp4,352 evaSnp5,352 line chainHg19,466 chainNetHg19,469 gap,105 gold,124 nestedRepeats,151 netHg19,466 refSeqComposite,999 refSeqComposite,1010 refSeqComposite,1609 rmsk,165 uniprot,1872 uniprot,1876 line-up chainHg19,533 chainNetHg19,536 netHg19,533 line-ups chainHg19,518 chainNetHg19,521 netHg19,518 lineage transMapEnsemblV5,807 transMapEstV5,776 transMapRefSeqV5,776 transMapRnaV5,776 transMapV5,882 lineage-specific chainHg19,934 chainNetHg19,937 netHg19,934 linear chainHg19,693 chainNetHg19,696 netHg19,693 lineargap chainHg19,699 chainNetHg19,702 netHg19,699 lines chainHg19,129 chainHg19,136 chainHg19,158 chainHg19,446 chainNetHg19,132 chainNetHg19,139 chainNetHg19,161 chainNetHg19,449 nestedRepeats,131 netHg19,129 netHg19,136 netHg19,158 netHg19,446 refSeqComposite,994 link gc5BaseBw,63 uniprot,491 uniprot,1675 linked refSeqComposite,1527 refSeqComposite,1642 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 uniprot,1919 lipid uniprot,346 lipman est,751 est,775 intronEst,835 intronEst,859 mrna,468 mrna,492 xenoMrna,543 xenoMrna,567 lipoification uniprot,577 list est,209 evaSnp4,351 evaSnp4,1015 evaSnp5,351 evaSnp5,1015 intronEst,290 mrna,155 refSeqComposite,759 refSeqComposite,1686 uniprot,979 uniprot,1165 uniprot,1831 xenoMrna,230 listed ensGene,49 literature refSeqComposite,282 refSeqComposite,655 uniprot,434 livestock animalQtl,43 animalQtl,357 animalQtl,379 lm uniprot,2019 loaded windowmaskerSdust,79 local chainHg19,109 chainHg19,180 chainNetHg19,112 chainNetHg19,183 ensGene,73 nestedRepeats,98 netHg19,109 netHg19,180 refSeqComposite,1332 located simpleRepeat,21 locating animalQtl,48 location chainHg19,248 chainNetHg19,251 netHg19,248 transMapEnsemblV5,401 transMapEnsemblV5,411 transMapEnsemblV5,478 transMapEstV5,370 transMapEstV5,380 transMapEstV5,447 transMapRefSeqV5,370 transMapRefSeqV5,380 transMapRefSeqV5,447 transMapRnaV5,370 transMapRnaV5,380 transMapRnaV5,447 transMapV5,476 transMapV5,486 transMapV5,553 uniprot,554 uniprot,767 uniprot,1417 locations gap,3 transMapEnsemblV5,490 transMapEstV5,459 transMapRefSeqV5,459 transMapRnaV5,459 transMapV5,565 uniprot,451 loci animalQtl,6 animalQtl,17 logic est,287 intronEst,368 mrna,233 xenoMrna,308 long est,674 intronEst,755 refSeqComposite,1023 rmsk,161 rmsk,166 long-established transMapEnsemblV5,802 transMapEstV5,771 transMapRefSeqV5,771 transMapRnaV5,771 transMapV5,877 longer chainHg19,81 chainNetHg19,84 evaSnp4,51 evaSnp5,51 netHg19,81 longest chainHg19,511 chainNetHg19,514 netHg19,511 look chainHg19,46 chainNetHg19,49 netHg19,46 losses transMapEnsemblV5,800 transMapEstV5,769 transMapRefSeqV5,769 transMapRnaV5,769 transMapV5,875 lot uniprot,1950 low nestedRepeats,39 rmsk,29 rmsk,181 lowe transMapEnsemblV5,790 transMapEstV5,759 transMapRefSeqV5,759 transMapRnaV5,759 transMapV5,865 lower chainHg19,487 chainNetHg19,490 netHg19,487 lower-level chainHg19,850 chainHg19,856 chainNetHg19,853 chainNetHg19,859 netHg19,850 netHg19,856 ls-snp uniprot,1536 lt refSeqComposite,940 ltr rmsk,170 m animalQtl,196 augustusGene,287 augustusGene,289 augustusGene,317 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 est,746 intronEst,830 mrna,463 transMapEnsemblV5,714 transMapEnsemblV5,721 transMapEnsemblV5,755 transMapEnsemblV5,757 transMapEnsemblV5,789 transMapEstV5,683 transMapEstV5,690 transMapEstV5,724 transMapEstV5,726 transMapEstV5,758 transMapRefSeqV5,683 transMapRefSeqV5,690 transMapRefSeqV5,724 transMapRefSeqV5,726 transMapRefSeqV5,758 transMapRnaV5,683 transMapRnaV5,690 transMapRnaV5,724 transMapRnaV5,726 transMapRnaV5,758 transMapV5,789 transMapV5,796 transMapV5,830 transMapV5,832 transMapV5,864 xenoMrna,538 made rmsk,110 transMapEnsemblV5,393 transMapEstV5,362 transMapRefSeqV5,362 transMapRnaV5,362 transMapV5,468 uniprot,931 uniprot,938 maglott animalQtl,214 animalQtl,294 refGene,404 refSeqComposite,1791 xenoRefGene,363 mailing evaSnp4,1014 evaSnp5,1014 refSeqComposite,1685 uniprot,1830 main animalQtl,204 unipAliSwissprot,12 uniprot,156 uniprot,1548 mainly animalQtl,266 maintained uniprot,719 make animalQtl,136 est,446 est,512 gold,72 intronEst,527 intronEst,593 refGene,56 refSeqComposite,115 refSeqComposite,1095 rmsk,123 transMapEnsemblV5,427 transMapEstV5,396 transMapRefSeqV5,396 transMapRnaV5,396 transMapV5,502 uniprot,1406 makedb rmsk,131 makedoc evaSnp4,950 evaSnp5,950 making uniprot,1978 mamm animalQtl,311 animalQtl,426 mammalian nestedRepeats,368 nestedRepeats,382 refGene,384 refSeqComposite,1771 rmsk,391 rmsk,405 xenoRefGene,343 manner refSeqComposite,1622 uniprot,1469 manual animalQtl,173 refSeqComposite,257 uniprot,1652 manually animalQtl,119 refSeqComposite,249 refSeqComposite,420 many chainHg19,397 chainNetHg19,400 est,144 intronEst,110 intronEst,225 mrna,90 netHg19,397 uniprot,932 uniprot,1124 xenoMrna,165 map chainHg19,325 chainNetHg19,328 netHg19,325 transMapEnsemblV5,292 transMapEstV5,261 transMapRefSeqV5,261 transMapRnaV5,261 transMapV5,367 uniprot,758 uniprot,1885 map-based animalQtl,71 mapped animalQtl,41 augustusGene,298 nestedRepeats,233 refSeqComposite,1104 transMapEnsemblV5,378 transMapEnsemblV5,410 transMapEnsemblV5,468 transMapEnsemblV5,766 transMapEstV5,347 transMapEstV5,379 transMapEstV5,437 transMapEstV5,735 transMapRefSeqV5,347 transMapRefSeqV5,379 transMapRefSeqV5,437 transMapRefSeqV5,735 transMapRnaV5,347 transMapRnaV5,379 transMapRnaV5,437 transMapRnaV5,735 transMapV5,130 transMapV5,453 transMapV5,485 transMapV5,543 transMapV5,841 uniprot,26 uniprot,97 uniprot,117 uniprot,132 uniprot,200 uniprot,213 uniprot,632 uniprot,1517 mapping animalQtl,9 animalQtl,25 animalQtl,68 animalQtl,111 cytoBandIdeo,7 evaSnp4,734 evaSnp5,734 gap,4 gc5BaseBw,8 gold,5 refSeqComposite,319 transMapEnsemblV5,265 transMapEnsemblV5,285 transMapEnsemblV5,298 transMapEstV5,234 transMapEstV5,254 transMapEstV5,267 transMapRefSeqV5,234 transMapRefSeqV5,254 transMapRefSeqV5,267 transMapRnaV5,234 transMapRnaV5,254 transMapRnaV5,267 transMapV5,340 transMapV5,360 transMapV5,373 ucscToRefSeq,5 uniprot,725 uniprot,752 uniprot,775 uniprot,904 uniprot,1213 uniprot,1322 uniprot,1613 uniprot,1853 mappings evaSnp4,21 evaSnp4,405 evaSnp5,21 evaSnp5,405 transMapEnsemblV5,7 transMapEnsemblV5,500 transMapEstV5,5 transMapEstV5,469 transMapRefSeqV5,6 transMapRefSeqV5,469 transMapRnaV5,6 transMapRnaV5,469 transMapV5,575 uniprot,1362 maps transMapEnsemblV5,474 transMapEnsemblV5,487 transMapEstV5,443 transMapEstV5,456 transMapRefSeqV5,443 transMapRefSeqV5,456 transMapRnaV5,443 transMapRnaV5,456 transMapV5,71 transMapV5,549 transMapV5,562 mar augustusGene,309 transMapEnsemblV5,777 transMapEstV5,746 transMapRefSeqV5,746 transMapRnaV5,746 transMapV5,852 mario augustusGene,102 augustusGene,283 mark est,533 evaSnp4,106 evaSnp5,106 intronEst,614 transMapEnsemblV5,679 transMapEstV5,648 transMapRefSeqV5,648 transMapRnaV5,648 transMapV5,754 uniprot,1539 uniprot,1956 marked refSeqComposite,521 markers microsat,23 markov augustusGene,325 marks evaSnp4,67 evaSnp5,67 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 windowmaskerSdust,5 windowmaskerSdust,16 masker windowmaskerSdust,102 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainHg19,253 chainHg19,512 chainHg19,550 chainNetHg19,256 chainNetHg19,515 chainNetHg19,553 est,81 est,297 est,312 est,353 est,371 evaSnp4,868 evaSnp4,934 evaSnp5,868 evaSnp5,934 intronEst,162 intronEst,378 intronEst,393 intronEst,434 intronEst,452 mrna,243 mrna,258 mrna,299 mrna,317 netHg19,253 netHg19,512 netHg19,550 refSeqComposite,908 refSeqComposite,922 uniprot,1305 uniprot,1341 xenoMrna,83 xenoMrna,318 xenoMrna,333 xenoMrna,374 xenoMrna,392 matches est,69 mrna,50 xenoMrna,55 matching chainHg19,256 chainNetHg19,259 est,87 intronEst,168 netHg19,256 uniprot,1068 uniprot,1075 xenoMrna,98 matrix chainHg19,663 chainHg19,695 chainNetHg19,666 chainNetHg19,698 netHg19,663 netHg19,695 mature est,503 intronEst,584 unipChain,3 uniprot,251 uniprot,292 max animalQtl,241 maximally chainHg19,655 chainNetHg19,658 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netHg19,655 maximilian uniprot,1944 maximum est,657 intronEst,738 maxtracks augustusGene,139 may chainHg19,171 chainHg19,426 chainNetHg19,174 chainNetHg19,429 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 est,140 est,259 est,269 est,377 est,428 est,508 est,510 est,522 est,524 est,544 est,668 evaSnp4,336 evaSnp4,356 evaSnp4,372 evaSnp4,892 evaSnp4,1003 evaSnp4,1245 evaSnp5,336 evaSnp5,356 evaSnp5,372 evaSnp5,892 evaSnp5,1003 evaSnp5,1245 gc5BaseBw,40 intronEst,221 intronEst,340 intronEst,350 intronEst,458 intronEst,509 intronEst,589 intronEst,591 intronEst,603 intronEst,605 intronEst,625 intronEst,749 mrna,86 mrna,205 mrna,215 mrna,323 mrna,367 nestedRepeats,268 nestedRepeats,290 netHg19,171 netHg19,426 refSeqComposite,59 refSeqComposite,659 rmsk,297 rmsk,307 simpleRepeat,43 transMapEnsemblV5,107 transMapEnsemblV5,142 transMapEstV5,76 transMapEstV5,111 transMapRefSeqV5,76 transMapRefSeqV5,111 transMapRnaV5,76 transMapRnaV5,111 transMapV5,182 transMapV5,217 uniprot,2046 xenoMrna,161 xenoMrna,280 xenoMrna,290 xenoMrna,398 xenoMrna,442 maybe evaSnp4,540 evaSnp4,590 evaSnp5,540 evaSnp5,590 mcgarvey refGene,376 refSeqComposite,1763 xenoRefGene,335 md5 uniprot,1601 mdash est,482 est,486 evaSnp4,486 evaSnp4,500 evaSnp4,550 evaSnp4,600 evaSnp4,633 evaSnp4,654 evaSnp5,486 evaSnp5,500 evaSnp5,550 evaSnp5,600 evaSnp5,633 evaSnp5,654 intronEst,563 intronEst,567 meant evaSnp4,658 evaSnp5,658 mediating uniprot,314 medium chainHg19,700 chainNetHg19,703 netHg19,700 refGene,111 refSeqComposite,618 xenoRefGene,71 mellifera augustusGene,216 mementos nestedRepeats,377 rmsk,400 menu refGene,212 refSeqComposite,846 xenoRefGene,172 meta-analysis animalQtl,232 method ensGene,120 uniprot,726 uniprot,753 uniprot,776 methods animalQtl,108 augustusGene,46 chainHg19,562 chainHg19,763 chainNetHg19,565 chainNetHg19,766 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 ensGene,29 ensGene,35 est,444 evaSnp4,443 evaSnp4,677 evaSnp5,443 evaSnp5,677 genscan,130 genscan,197 intronEst,525 microsat,45 mrna,383 nestedRepeats,244 netHg19,562 netHg19,763 refGene,255 refSeqComposite,90 refSeqComposite,1136 refSeqComposite,1218 rmsk,286 simpleRepeat,55 transMapEnsemblV5,151 transMapEstV5,120 transMapRefSeqV5,120 transMapRnaV5,120 transMapV5,226 uniprot,777 windowmaskerSdust,46 xenoMrna,458 xenoRefGene,215 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 mf animalQtl,299 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 might est,105 est,677 intronEst,186 intronEst,758 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller chainHg19,928 chainHg19,965 chainHg19,1026 chainHg19,1046 chainHg19,1094 chainNetHg19,931 chainNetHg19,968 chainNetHg19,1029 chainNetHg19,1049 chainNetHg19,1097 netHg19,928 netHg19,965 netHg19,1026 netHg19,1046 netHg19,1094 minexonintronprob augustusGene,135 minimum chainHg19,676 chainNetHg19,679 netHg19,676 minmeanexonintronprob augustusGene,137 minmei chainHg19,920 chainNetHg19,923 netHg19,920 mismatch refSeqComposite,892 rmsk,218 mismatching refSeqComposite,896 misplacements uniprot,853 missense evaSnp4,835 evaSnp4,854 evaSnp5,835 evaSnp5,854 missense_variant evaSnp4,769 evaSnp5,769 mitochondrial evaSnp4,927 evaSnp5,927 mitochondrion refSeqComposite,240 mj refGene,375 refSeqComposite,1762 xenoRefGene,334 mk_counts windowmaskerSdust,59 ml evaSnp4,1219 evaSnp5,1219 mode chainHg19,381 chainNetHg19,384 est,60 est,125 evaSnp4,174 evaSnp5,174 gold,80 intronEst,144 intronEst,206 mrna,41 mrna,71 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netHg19,381 rmsk,142 xenoMrna,46 xenoMrna,146 model augustusGene,121 augustusGene,326 genscan,140 modeling genscan,182 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 evaSnp4,388 evaSnp4,413 evaSnp4,722 evaSnp4,742 evaSnp4,1158 evaSnp5,388 evaSnp5,413 evaSnp5,722 evaSnp5,742 evaSnp5,1158 genscan,158 uniprot,733 modes chainHg19,238 chainNetHg19,241 netHg19,238 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modifications unipModif,2 unipModif,6 uniprot,340 uniprot,574 modified rmsk,57 uniprot,343 modsnp uniprot,2030 moiety-binding uniprot,347 mol cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,221 molecular genscan,199 months uniprot,1573 more augustusGene,35 chainHg19,160 chainHg19,220 chainNetHg19,163 chainNetHg19,223 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 ensGene,18 ensGene,158 est,65 est,172 est,279 est,409 est,433 evaSnp4,136 evaSnp4,151 evaSnp4,163 evaSnp4,503 evaSnp4,553 evaSnp4,621 evaSnp4,634 evaSnp4,967 evaSnp4,1025 evaSnp5,136 evaSnp5,151 evaSnp5,163 evaSnp5,503 evaSnp5,553 evaSnp5,621 evaSnp5,634 evaSnp5,967 evaSnp5,1025 genscan,50 genscan,125 genscan,163 intronEst,253 intronEst,360 intronEst,490 intronEst,514 microsat,96 mrna,46 mrna,118 mrna,225 mrna,346 mrna,372 nestedRepeats,211 nestedRepeats,300 netHg19,160 netHg19,220 refGene,70 refGene,214 refSeqComposite,93 refSeqComposite,129 refSeqComposite,848 refSeqComposite,1378 refSeqComposite,1458 rmsk,323 simpleRepeat,57 transMapEnsemblV5,130 transMapEnsemblV5,147 transMapEnsemblV5,222 transMapEnsemblV5,267 transMapEnsemblV5,289 transMapEnsemblV5,565 transMapEstV5,99 transMapEstV5,116 transMapEstV5,191 transMapEstV5,236 transMapEstV5,258 transMapEstV5,534 transMapRefSeqV5,99 transMapRefSeqV5,116 transMapRefSeqV5,191 transMapRefSeqV5,236 transMapRefSeqV5,258 transMapRefSeqV5,534 transMapRnaV5,99 transMapRnaV5,116 transMapRnaV5,191 transMapRnaV5,236 transMapRnaV5,258 transMapRnaV5,534 transMapV5,62 transMapV5,106 transMapV5,163 transMapV5,205 transMapV5,222 transMapV5,297 transMapV5,342 transMapV5,364 transMapV5,640 uniprot,498 uniprot,691 uniprot,984 uniprot,1841 xenoMrna,51 xenoMrna,193 xenoMrna,300 xenoMrna,421 xenoMrna,447 xenoRefGene,174 morgulis windowmaskerSdust,90 most augustusGene,93 augustusGene,110 est,481 evaSnp4,69 evaSnp4,424 evaSnp5,69 evaSnp5,424 intronEst,562 nestedRepeats,249 refSeqComposite,576 refSeqComposite,943 transMapV5,92 uniprot,683 uniprot,756 uniprot,1295 uniprot,1391 mostly uniprot,1365 motifs uniprot,388 mouse chainHg19,1059 chainNetHg19,1062 netHg19,1059 transMapEnsemblV5,44 transMapEnsemblV5,364 transMapEstV5,333 transMapRefSeqV5,333 transMapRnaV5,333 transMapV5,439 uniprot,521 uniprot,535 mouse-over evaSnp4,300 evaSnp4,347 evaSnp5,300 evaSnp5,347 mousing evaSnp4,301 evaSnp5,301 mrna est,7 est,504 est,520 est,603 evaSnp4,862 evaSnp4,906 evaSnp5,862 evaSnp5,906 intronEst,9 intronEst,585 intronEst,601 intronEst,684 mrna,7 mrna,12 mrna,126 mrna,399 mrna,439 mrna,446 transMapEnsemblV5,455 transMapEstV5,424 transMapRefSeqV5,424 transMapRnaV5,18 transMapRnaV5,424 transMapV5,99 transMapV5,530 xenoMrna,7 xenoMrna,21 xenoMrna,201 xenoMrna,473 xenoMrna,514 xenoMrna,521 mrnas mrna,2 mrna,4 mrna,18 mrna,136 mrna,241 mrna,256 mrna,297 mrna,315 mrna,340 mrna,386 transMapEnsemblV5,172 transMapEstV5,141 transMapRefSeqV5,141 transMapRnaV5,141 transMapV5,110 transMapV5,247 xenoMrna,2 xenoMrna,4 xenoMrna,211 xenoMrna,316 xenoMrna,331 xenoMrna,372 xenoMrna,390 xenoMrna,415 xenoMrna,460 much chainHg19,877 chainHg19,894 chainNetHg19,880 chainNetHg19,897 nestedRepeats,210 netHg19,877 netHg19,894 mujica uniprot,1967 multiple chainHg19,192 chainNetHg19,195 est,257 est,686 evaSnp4,124 evaSnp4,338 evaSnp4,353 evaSnp4,370 evaSnp4,380 evaSnp5,124 evaSnp5,338 evaSnp5,353 evaSnp5,370 evaSnp5,380 intronEst,338 intronEst,767 mrna,203 mrna,402 netHg19,192 refGene,282 refSeqComposite,1250 refSeqComposite,1297 transMapEnsemblV5,498 transMapEstV5,467 transMapRefSeqV5,467 transMapRnaV5,467 transMapV5,573 uniprot,58 uniprot,1067 uniprot,1095 xenoMrna,278 xenoMrna,476 xenoRefGene,242 multiplenucleotidevariant evaSnp4,632 evaSnp5,632 must intronEst,61 intronEst,78 refSeqComposite,302 refSeqComposite,1631 mutagenesis uniprot,353 mutat uniprot,2044 mutated uniprot,618 mutation chainHg19,181 chainNetHg19,184 netHg19,181 refSeqComposite,559 mutation-related uniprot,408 mutations unipMut,1 unipMut,5 uniprot,352 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 ensGene,115 ensGene,125 refSeqComposite,1323 refSeqComposite,1626 refSeqComposite,1640 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 evaSnp4,1169 evaSnp5,1169 refSeqComposite,914 refSeqComposite,955 refSeqComposite,982 refSeqComposite,1041 refSeqComposite,1068 refSeqComposite,1083 nagrp animalQtl,275 name chainHg19,363 chainNetHg19,366 est,198 intronEst,279 mrna,144 nestedRepeats,136 netHg19,363 refGene,147 refGene,157 refGene,162 refSeqComposite,755 refSeqComposite,768 refSeqComposite,778 refSeqComposite,786 refSeqComposite,798 uniprot,105 uniprot,461 uniprot,541 uniprot,1577 xenoMrna,219 xenoRefGene,107 xenoRefGene,117 xenoRefGene,122 names chainHg19,242 chainNetHg19,245 evaSnp4,698 evaSnp5,698 netHg19,242 refGene,169 refSeqComposite,803 ucscToRefSeq,16 xenoRefGene,129 nar evaSnp4,1204 evaSnp5,1204 native augustusGene,295 transMapEnsemblV5,763 transMapEstV5,732 transMapRefSeqV5,732 transMapRnaV5,732 transMapV5,122 transMapV5,838 natl chainHg19,1064 chainNetHg19,1067 netHg19,1064 natural chainHg19,815 chainNetHg19,818 netHg19,815 navigation evaSnp4,179 evaSnp5,179 nbci uniprot,822 nbsp chainHg19,666 chainNetHg19,669 netHg19,666 nc_001941 gold,159 ncbi animalQtl,216 evaSnp4,49 evaSnp4,392 evaSnp4,719 evaSnp4,1150 evaSnp5,49 evaSnp5,392 evaSnp5,719 evaSnp5,1150 gap,27 gap,30 gap,56 gold,29 gold,32 gold,55 ncbiRefSeq,3 ncbiRefSeqCurated,3 ncbiRefSeqGenomicDiff,5 ncbiRefSeqOther,3 ncbiRefSeqPredicted,3 refGene,30 refGene,336 refGene,406 refSeqComposite,1 refSeqComposite,6 refSeqComposite,13 refSeqComposite,27 refSeqComposite,72 refSeqComposite,79 refSeqComposite,104 refSeqComposite,317 refSeqComposite,373 refSeqComposite,542 refSeqComposite,638 refSeqComposite,645 refSeqComposite,689 refSeqComposite,1156 refSeqComposite,1187 refSeqComposite,1203 refSeqComposite,1723 refSeqComposite,1793 ucscToRefSeq,22 ucscToRefSeq,33 uniprot,840 uniprot,856 uniprot,1024 uniprot,1046 uniprot,1049 uniprot,1079 uniprot,1204 uniprot,1274 uniprot,1280 uniprot,1289 uniprot,1299 windowmaskerSdust,29 windowmaskerSdust,43 xenoRefGene,27 xenoRefGene,296 xenoRefGene,365 ncbirefseq refSeqComposite,1406 refSeqComposite,1550 refSeqComposite,1694 ncbirefseqcurated refSeqComposite,1409 ncbirefseqdiffs.bb refSeqComposite,1489 ncbirefseqother.bb refSeqComposite,1487 refSeqComposite,1551 ncbirefseqpredicted refSeqComposite,1412 refSeqComposite,1614 ncbirefseqpredicted.gtf refSeqComposite,1615 ncbirefseqpsl refSeqComposite,1420 ndash refSeqComposite,199 refSeqComposite,210 refSeqComposite,340 refSeqComposite,379 refSeqComposite,434 refSeqComposite,457 refSeqComposite,479 refSeqComposite,515 refSeqComposite,548 refSeqComposite,893 refSeqComposite,927 refSeqComposite,960 refSeqComposite,1018 refSeqComposite,1044 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 evaSnp4,78 evaSnp5,78 refSeqComposite,1643 near-best transMapEnsemblV5,355 transMapEstV5,324 transMapRefSeqV5,324 transMapRnaV5,324 transMapV5,430 necessary chainHg19,799 chainNetHg19,802 netHg19,799 neither evaSnp4,409 evaSnp4,738 evaSnp5,409 evaSnp5,738 nematodes augustusGene,211 net chainHg19,34 chainHg19,258 chainHg19,261 chainHg19,376 chainHg19,753 chainNetHg19,3 chainNetHg19,11 chainNetHg19,37 chainNetHg19,261 chainNetHg19,264 chainNetHg19,379 chainNetHg19,756 chainNetHg19Viewchain,9 chainNetHg19Viewnet,1 chainNetHg19Viewnet,9 netHg19,2 netHg19,9 netHg19,34 netHg19,258 netHg19,261 netHg19,376 netHg19,753 transMapV5,139 netclass chainHg19,869 chainHg19,992 chainNetHg19,872 chainNetHg19,995 netHg19,869 netHg19,992 netfilter transMapEnsemblV5,252 transMapEstV5,221 transMapRefSeqV5,221 transMapRnaV5,221 transMapV5,327 nets chainHg19,979 chainNetHg19,982 netHg19,979 transMapEnsemblV5,199 transMapEnsemblV5,241 transMapEnsemblV5,247 transMapEnsemblV5,261 transMapEstV5,168 transMapEstV5,210 transMapEstV5,216 transMapEstV5,230 transMapRefSeqV5,168 transMapRefSeqV5,210 transMapRefSeqV5,216 transMapRefSeqV5,230 transMapRnaV5,168 transMapRnaV5,210 transMapRnaV5,216 transMapRnaV5,230 transMapV5,88 transMapV5,274 transMapV5,316 transMapV5,322 transMapV5,336 netsyntenic chainHg19,837 chainHg19,990 chainNetHg19,840 chainNetHg19,993 netHg19,837 netHg19,990 new animalQtl,56 augustusGene,329 newer est,555 intronEst,636 nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next chainHg19,342 chainHg19,371 chainNetHg19,345 chainNetHg19,374 netHg19,342 netHg19,371 refSeqComposite,166 refSeqComposite,751 nig augustusGene,270 nm refSeqComposite,224 refSeqComposite,489 nm_ ncbiRefSeq,9 ncbiRefSeqCurated,8 ncbiRefSeqOther,8 refGene,8 nm_012309 refSeqComposite,1135 nm_012309.4 refSeqComposite,1133 nmd_transcript_variant evaSnp4,801 evaSnp5,801 no est,92 evaSnp4,50 evaSnp4,826 evaSnp5,50 evaSnp5,826 intronEst,173 microsat,73 transMapEnsemblV5,221 transMapEstV5,190 transMapRefSeqV5,190 transMapRnaV5,190 transMapV5,296 uniprot,1031 uniprot,1078 uniprot,1262 uniprot,1324 no_sequence_alteration evaSnp4,802 evaSnp5,802 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainHg19,49 chainNetHg19,52 netHg19,49 non-coding augustusGene,75 evaSnp4,458 evaSnp4,782 evaSnp5,458 evaSnp5,782 refGene,231 refSeqComposite,1084 xenoRefGene,191 non-human evaSnp4,53 evaSnp5,53 non-mrna est,624 intronEst,705 non-protein-coding refGene,25 refGene,239 refSeqComposite,22 xenoRefGene,17 xenoRefGene,199 non-redundant refGene,412 refSeqComposite,1799 xenoRefGene,371 non-sheep xenoMrna,3 xenoRefGene,3 non_coding_transcript_exon_variant evaSnp4,792 evaSnp5,792 nonsense evaSnp4,836 evaSnp5,836 nonsyn chainHg19,548 chainNetHg19,551 netHg19,548 nor xenoMrna,124 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not chainHg19,804 chainNetHg19,807 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 est,349 est,484 est,511 est,525 evaSnp4,398 evaSnp4,673 evaSnp4,866 evaSnp4,956 evaSnp5,398 evaSnp5,673 evaSnp5,866 evaSnp5,956 intronEst,430 intronEst,565 intronEst,592 intronEst,606 mrna,295 ncbiRefSeqOther,7 netHg19,804 refSeqComposite,176 refSeqComposite,390 refSeqComposite,428 refSeqComposite,471 refSeqComposite,671 refSeqComposite,696 refSeqComposite,1056 refSeqComposite,1134 rmsk,113 rmsk,313 transMapEnsemblV5,62 uniprot,169 uniprot,627 uniprot,959 uniprot,1130 uniprot,1455 xenoMrna,120 xenoMrna,370 note est,654 evaSnp4,953 evaSnp5,953 intronEst,735 nestedRepeats,264 refSeqComposite,175 refSeqComposite,1616 transMapEnsemblV5,496 transMapEstV5,465 transMapRefSeqV5,465 transMapRnaV5,465 transMapV5,571 uniprot,695 novel transMapEnsemblV5,737 transMapEstV5,706 transMapRefSeqV5,706 transMapRnaV5,706 transMapV5,812 novo augustusGene,304 transMapEnsemblV5,772 transMapEstV5,741 transMapRefSeqV5,741 transMapRnaV5,741 transMapV5,847 now uniprot,1680 np refSeqComposite,226 refSeqComposite,229 np_ ncbiRefSeq,13 ncbiRefSeqCurated,10 ncbiRefSeqOther,12 nr refSeqComposite,225 refSeqComposite,491 nr_ ncbiRefSeq,11 ncbiRefSeqCurated,9 ncbiRefSeqOther,9 refGene,10 nrsp-8 animalQtl,271 ns chainHg19,884 chainNetHg19,887 netHg19,884 nuclear rmsk,155 rmsk,163 nucleic animalQtl,389 ensGene,195 est,758 est,783 evaSnp4,1195 evaSnp5,1195 intronEst,842 intronEst,867 microsat,125 mrna,475 mrna,500 refGene,387 refGene,420 refSeqComposite,1774 refSeqComposite,1807 simpleRepeat,85 uniprot,1997 xenoMrna,550 xenoMrna,575 xenoRefGene,346 xenoRefGene,379 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 evaSnp4,24 evaSnp4,112 evaSnp4,125 evaSnp4,489 evaSnp4,517 evaSnp4,567 evaSnp4,626 evaSnp4,637 evaSnp4,887 evaSnp5,24 evaSnp5,112 evaSnp5,125 evaSnp5,489 evaSnp5,517 evaSnp5,567 evaSnp5,626 evaSnp5,637 evaSnp5,887 nucleotides evaSnp4,110 evaSnp4,504 evaSnp4,554 evaSnp4,646 evaSnp5,110 evaSnp5,504 evaSnp5,554 evaSnp5,646 number animalQtl,38 animalQtl,157 augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 evaSnp4,643 evaSnp5,643 intronEst,150 rmsk,233 transMapEnsemblV5,424 transMapEnsemblV5,547 transMapEstV5,393 transMapEstV5,516 transMapRefSeqV5,393 transMapRefSeqV5,516 transMapRnaV5,393 transMapRnaV5,516 transMapV5,499 transMapV5,622 o refGene,369 refSeqComposite,1756 xenoRefGene,328 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 uniprot,1114 obtain evaSnp4,1105 evaSnp5,1105 transMapEnsemblV5,649 transMapEstV5,618 transMapRefSeqV5,618 transMapRnaV5,618 transMapV5,724 uniprot,1803 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 evaSnp4,1065 evaSnp5,1065 refSeqComposite,1481 refSeqComposite,1501 transMapEnsemblV5,156 transMapEnsemblV5,609 transMapEstV5,125 transMapEstV5,578 transMapRefSeqV5,125 transMapRefSeqV5,578 transMapRnaV5,125 transMapRnaV5,578 transMapV5,231 transMapV5,684 uniprot,1506 uniprot,1695 occasional refSeqComposite,62 occur simpleRepeat,36 oct animalQtl,314 augustusGene,334 evaSnp4,1199 evaSnp5,1199 of animalQtl,84 animalQtl,131 animalQtl,228 animalQtl,422 augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 chainHg19,17 chainHg19,64 chainHg19,179 chainHg19,199 chainHg19,251 chainHg19,272 chainHg19,354 chainHg19,364 chainHg19,482 chainHg19,502 chainHg19,635 chainHg19,640 chainHg19,658 chainHg19,678 chainHg19,878 chainHg19,953 chainHg19,975 chainHg19,999 chainHg19,1013 chainNetHg19,20 chainNetHg19,67 chainNetHg19,182 chainNetHg19,202 chainNetHg19,254 chainNetHg19,275 chainNetHg19,357 chainNetHg19,367 chainNetHg19,485 chainNetHg19,505 chainNetHg19,638 chainNetHg19,643 chainNetHg19,661 chainNetHg19,681 chainNetHg19,881 chainNetHg19,956 chainNetHg19,978 chainNetHg19,1002 chainNetHg19,1016 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ensGene,33 ensGene,134 est,40 est,70 est,79 est,97 est,99 est,134 est,173 est,199 est,210 est,246 est,315 est,425 est,502 est,518 est,536 est,553 est,615 est,623 est,627 est,706 evaSnp4,22 evaSnp4,84 evaSnp4,92 evaSnp4,119 evaSnp4,234 evaSnp4,243 evaSnp4,275 evaSnp4,406 evaSnp4,410 evaSnp4,479 evaSnp4,537 evaSnp4,587 evaSnp4,608 evaSnp4,614 evaSnp4,625 evaSnp4,644 evaSnp4,735 evaSnp4,739 evaSnp4,861 evaSnp4,904 evaSnp4,939 evaSnp4,942 evaSnp4,1189 evaSnp4,1208 evaSnp5,22 evaSnp5,84 evaSnp5,92 evaSnp5,119 evaSnp5,234 evaSnp5,243 evaSnp5,275 evaSnp5,406 evaSnp5,410 evaSnp5,479 evaSnp5,537 evaSnp5,587 evaSnp5,608 evaSnp5,614 evaSnp5,625 evaSnp5,644 evaSnp5,735 evaSnp5,739 evaSnp5,861 evaSnp5,904 evaSnp5,939 evaSnp5,942 evaSnp5,1189 evaSnp5,1208 gap,40 gap,63 gap,82 gap,88 gap,122 gc5BaseBw,19 gc5BaseBw,46 gc5BaseBw,52 gc5BaseBw,67 gc5BaseBw,76 genscan,43 genscan,110 genscan,134 genscan,212 gold,42 gold,62 gold,88 gold,113 gold,143 intronEst,31 intronEst,52 intronEst,64 intronEst,96 intronEst,108 intronEst,117 intronEst,151 intronEst,160 intronEst,178 intronEst,180 intronEst,215 intronEst,254 intronEst,280 intronEst,291 intronEst,327 intronEst,396 intronEst,506 intronEst,583 intronEst,599 intronEst,617 intronEst,634 intronEst,696 intronEst,704 intronEst,708 intronEst,787 microsat,27 microsat,55 microsat,64 microsat,81 mrna,51 mrna,80 mrna,119 mrna,145 mrna,156 mrna,192 mrna,261 mrna,364 mrna,422 ncbiRefSeqPsl,5 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netHg19,17 netHg19,64 netHg19,179 netHg19,199 netHg19,251 netHg19,272 netHg19,354 netHg19,364 netHg19,482 netHg19,502 netHg19,635 netHg19,640 netHg19,658 netHg19,678 netHg19,878 netHg19,953 netHg19,975 netHg19,999 netHg19,1013 refGene,5 refGene,101 refGene,120 refGene,134 refGene,159 refGene,270 refGene,302 refGene,415 refSeqComposite,161 refSeqComposite,194 refSeqComposite,212 refSeqComposite,259 refSeqComposite,320 refSeqComposite,342 refSeqComposite,436 refSeqComposite,486 refSeqComposite,517 refSeqComposite,524 refSeqComposite,550 refSeqComposite,608 refSeqComposite,628 refSeqComposite,706 refSeqComposite,734 refSeqComposite,783 refSeqComposite,792 refSeqComposite,872 refSeqComposite,887 refSeqComposite,939 refSeqComposite,985 refSeqComposite,1003 refSeqComposite,1051 refSeqComposite,1238 refSeqComposite,1270 refSeqComposite,1343 refSeqComposite,1424 refSeqComposite,1426 refSeqComposite,1496 refSeqComposite,1566 refSeqComposite,1646 refSeqComposite,1692 refSeqComposite,1696 refSeqComposite,1802 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 transMapEnsemblV5,85 transMapEnsemblV5,139 transMapEnsemblV5,168 transMapEnsemblV5,207 transMapEnsemblV5,273 transMapEnsemblV5,280 transMapEnsemblV5,296 transMapEnsemblV5,308 transMapEnsemblV5,321 transMapEnsemblV5,338 transMapEnsemblV5,357 transMapEnsemblV5,375 transMapEnsemblV5,454 transMapEnsemblV5,505 transMapEnsemblV5,548 transMapEnsemblV5,736 transMapEnsemblV5,801 transMapEstV5,54 transMapEstV5,108 transMapEstV5,137 transMapEstV5,176 transMapEstV5,242 transMapEstV5,249 transMapEstV5,265 transMapEstV5,277 transMapEstV5,290 transMapEstV5,307 transMapEstV5,326 transMapEstV5,344 transMapEstV5,423 transMapEstV5,474 transMapEstV5,517 transMapEstV5,705 transMapEstV5,770 transMapRefSeqV5,54 transMapRefSeqV5,108 transMapRefSeqV5,137 transMapRefSeqV5,176 transMapRefSeqV5,242 transMapRefSeqV5,249 transMapRefSeqV5,265 transMapRefSeqV5,277 transMapRefSeqV5,290 transMapRefSeqV5,307 transMapRefSeqV5,326 transMapRefSeqV5,344 transMapRefSeqV5,423 transMapRefSeqV5,474 transMapRefSeqV5,517 transMapRefSeqV5,705 transMapRefSeqV5,770 transMapRnaV5,54 transMapRnaV5,108 transMapRnaV5,137 transMapRnaV5,176 transMapRnaV5,242 transMapRnaV5,249 transMapRnaV5,265 transMapRnaV5,277 transMapRnaV5,290 transMapRnaV5,307 transMapRnaV5,326 transMapRnaV5,344 transMapRnaV5,423 transMapRnaV5,474 transMapRnaV5,517 transMapRnaV5,705 transMapRnaV5,770 transMapV5,55 transMapV5,214 transMapV5,243 transMapV5,282 transMapV5,348 transMapV5,355 transMapV5,371 transMapV5,383 transMapV5,396 transMapV5,413 transMapV5,432 transMapV5,450 transMapV5,529 transMapV5,580 transMapV5,623 transMapV5,811 transMapV5,876 unipAliSwissprot,5 unipAliTrembl,5 unipInterest,4 uniprot,83 uniprot,269 uniprot,298 uniprot,310 uniprot,385 uniprot,407 uniprot,420 uniprot,452 uniprot,465 uniprot,542 uniprot,561 uniprot,652 uniprot,677 uniprot,877 uniprot,902 uniprot,980 uniprot,1111 uniprot,1125 uniprot,1159 uniprot,1166 uniprot,1181 uniprot,1288 uniprot,1298 uniprot,1306 uniprot,1315 uniprot,1347 uniprot,1360 uniprot,1363 uniprot,1397 uniprot,1436 uniprot,1457 uniprot,1590 uniprot,1594 uniprot,1639 uniprot,1646 uniprot,1656 uniprot,1666 uniprot,1684 uniprot,1687 uniprot,1710 uniprot,1951 xenoMrna,17 xenoMrna,56 xenoMrna,74 xenoMrna,96 xenoMrna,106 xenoMrna,155 xenoMrna,194 xenoMrna,220 xenoMrna,231 xenoMrna,267 xenoMrna,336 xenoMrna,439 xenoMrna,497 xenoRefGene,61 xenoRefGene,80 xenoRefGene,94 xenoRefGene,119 xenoRefGene,230 xenoRefGene,262 xenoRefGene,374 off chainHg19,333 chainHg19,339 chainNetHg19,336 chainNetHg19,342 netHg19,333 netHg19,339 refGene,172 refSeqComposite,806 xenoRefGene,132 offers genscan,79 often chainHg19,209 chainHg19,221 chainNetHg19,212 chainNetHg19,224 netHg19,209 netHg19,221 older uniprot,1560 uniprot,1647 oligo-dt est,495 intronEst,576 omim refSeqComposite,780 refSeqComposite,799 omitted nestedRepeats,165 on animalQtl,348 animalQtl,353 augustusGene,29 augustusGene,37 augustusGene,151 chainHg19,321 chainHg19,347 chainHg19,450 chainHg19,464 chainHg19,514 chainHg19,519 chainHg19,534 chainHg19,765 chainNetHg19,324 chainNetHg19,350 chainNetHg19,453 chainNetHg19,467 chainNetHg19,517 chainNetHg19,522 chainNetHg19,537 chainNetHg19,768 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 ensGene,20 ensGene,118 ensGene,123 ensGene,129 ensGene,140 est,229 est,278 evaSnp4,204 evaSnp4,209 evaSnp4,379 evaSnp4,858 evaSnp4,979 evaSnp5,204 evaSnp5,209 evaSnp5,379 evaSnp5,858 evaSnp5,979 gap,85 genscan,27 genscan,52 intronEst,310 intronEst,359 mrna,175 mrna,224 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netHg19,321 netHg19,347 netHg19,450 netHg19,464 netHg19,514 netHg19,519 netHg19,534 netHg19,765 refGene,72 refGene,383 refSeqComposite,131 refSeqComposite,181 refSeqComposite,238 refSeqComposite,252 refSeqComposite,360 refSeqComposite,513 refSeqComposite,566 refSeqComposite,972 refSeqComposite,1116 refSeqComposite,1596 refSeqComposite,1638 refSeqComposite,1676 refSeqComposite,1701 refSeqComposite,1770 rmsk,74 transMapEnsemblV5,567 transMapEnsemblV5,804 transMapEstV5,536 transMapEstV5,773 transMapRefSeqV5,536 transMapRefSeqV5,773 transMapRnaV5,536 transMapRnaV5,773 transMapV5,102 transMapV5,642 transMapV5,879 uniprot,19 uniprot,61 uniprot,129 uniprot,172 uniprot,232 uniprot,443 uniprot,482 uniprot,648 uniprot,728 uniprot,772 uniprot,809 uniprot,859 uniprot,1035 uniprot,1139 uniprot,1176 uniprot,1366 uniprot,1446 uniprot,1534 uniprot,1558 uniprot,1567 uniprot,1581 uniprot,1605 uniprot,1887 uniprot,2039 xenoMrna,250 xenoMrna,299 xenoRefGene,342 once est,263 intronEst,344 mrna,209 uniprot,647 xenoMrna,284 one augustusGene,169 chainHg19,187 chainHg19,355 chainHg19,501 chainHg19,792 chainHg19,888 chainNetHg19,190 chainNetHg19,358 chainNetHg19,504 chainNetHg19,795 chainNetHg19,891 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 est,170 est,281 est,314 evaSnp4,322 evaSnp4,478 evaSnp4,501 evaSnp4,515 evaSnp4,551 evaSnp4,565 evaSnp4,623 evaSnp4,636 evaSnp5,322 evaSnp5,478 evaSnp5,501 evaSnp5,515 evaSnp5,551 evaSnp5,565 evaSnp5,623 evaSnp5,636 gold,155 intronEst,67 intronEst,251 intronEst,362 intronEst,395 mrna,116 mrna,227 mrna,260 netHg19,187 netHg19,355 netHg19,501 netHg19,792 netHg19,888 transMapV5,77 uniprot,74 uniprot,77 uniprot,155 uniprot,981 uniprot,1098 uniprot,1638 xenoMrna,191 xenoMrna,302 xenoMrna,335 ones transMapEnsemblV5,50 uniprot,1041 ongoing uniprot,1569 only chainHg19,351 chainNetHg19,354 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 est,154 est,294 est,367 est,400 est,697 evaSnp4,1106 evaSnp5,1106 intronEst,235 intronEst,375 intronEst,448 intronEst,481 intronEst,778 microsat,61 mrna,100 mrna,240 mrna,313 mrna,413 netHg19,351 refGene,248 refGene,293 refSeqComposite,157 refSeqComposite,217 refSeqComposite,234 refSeqComposite,246 refSeqComposite,512 refSeqComposite,564 refSeqComposite,1261 refSeqComposite,1533 transMapEnsemblV5,49 transMapEnsemblV5,650 transMapEstV5,619 transMapRefSeqV5,619 transMapRnaV5,619 transMapV5,725 uniprot,645 uniprot,975 uniprot,1178 uniprot,1302 uniprot,1804 xenoMrna,175 xenoMrna,315 xenoMrna,388 xenoMrna,487 xenoRefGene,208 xenoRefGene,253 ontology evaSnp4,282 evaSnp4,470 evaSnp4,483 evaSnp4,804 evaSnp5,282 evaSnp5,470 evaSnp5,483 evaSnp5,804 oommen transMapEnsemblV5,728 transMapEstV5,697 transMapRefSeqV5,697 transMapRnaV5,697 transMapV5,803 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opposite chainHg19,546 chainNetHg19,549 netHg19,546 option augustusGene,167 augustusGene,187 est,413 genscan,94 intronEst,494 mrna,350 refGene,152 refGene,204 refSeqComposite,773 refSeqComposite,838 transMapEnsemblV5,134 transMapEstV5,103 transMapRefSeqV5,103 transMapRnaV5,103 transMapV5,209 xenoMrna,425 xenoRefGene,112 xenoRefGene,164 optional refGene,182 refSeqComposite,816 xenoRefGene,142 options est,442 gc5BaseBw,70 genscan,85 intronEst,523 mrna,381 xenoMrna,456 or animalQtl,125 animalQtl,155 chainHg19,30 chainHg19,127 chainHg19,150 chainHg19,182 chainHg19,485 chainHg19,860 chainHg19,889 chainNetHg19,33 chainNetHg19,130 chainNetHg19,153 chainNetHg19,185 chainNetHg19,488 chainNetHg19,863 chainNetHg19,892 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 ensGene,68 ensGene,89 ensGene,110 est,171 est,306 est,325 est,334 est,399 est,477 est,509 est,523 evaSnp4,77 evaSnp4,135 evaSnp4,189 evaSnp4,195 evaSnp4,288 evaSnp4,402 evaSnp4,460 evaSnp4,502 evaSnp4,552 evaSnp4,784 evaSnp4,931 evaSnp4,994 evaSnp4,1019 evaSnp4,1058 evaSnp4,1078 evaSnp5,77 evaSnp5,135 evaSnp5,189 evaSnp5,195 evaSnp5,288 evaSnp5,402 evaSnp5,460 evaSnp5,502 evaSnp5,552 evaSnp5,784 evaSnp5,931 evaSnp5,994 evaSnp5,1019 evaSnp5,1058 evaSnp5,1078 intronEst,252 intronEst,387 intronEst,406 intronEst,415 intronEst,480 intronEst,558 intronEst,590 intronEst,604 mrna,117 mrna,252 mrna,271 mrna,280 ncbiRefSeqCurated,11 ncbiRefSeqOther,13 ncbiRefSeqPredicted,9 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netHg19,30 netHg19,127 netHg19,150 netHg19,182 netHg19,485 netHg19,860 netHg19,889 refGene,62 refGene,170 refSeqComposite,85 refSeqComposite,121 refSeqComposite,227 refSeqComposite,279 refSeqComposite,354 refSeqComposite,400 refSeqComposite,409 refSeqComposite,415 refSeqComposite,424 refSeqComposite,619 refSeqComposite,640 refSeqComposite,688 refSeqComposite,779 refSeqComposite,789 refSeqComposite,804 refSeqComposite,948 refSeqComposite,970 refSeqComposite,1049 refSeqComposite,1310 refSeqComposite,1325 refSeqComposite,1492 refSeqComposite,1514 rmsk,251 rmsk,280 transMapEnsemblV5,19 transMapEnsemblV5,531 transMapEnsemblV5,559 transMapEnsemblV5,602 transMapEnsemblV5,622 transMapEstV5,500 transMapEstV5,528 transMapEstV5,571 transMapEstV5,591 transMapRefSeqV5,500 transMapRefSeqV5,528 transMapRefSeqV5,571 transMapRefSeqV5,591 transMapRnaV5,500 transMapRnaV5,528 transMapRnaV5,571 transMapRnaV5,591 transMapV5,47 transMapV5,606 transMapV5,634 transMapV5,677 transMapV5,697 uniprot,317 uniprot,389 uniprot,436 uniprot,829 uniprot,888 uniprot,982 uniprot,1038 uniprot,1205 uniprot,1266 uniprot,1401 uniprot,1449 uniprot,1722 uniprot,1776 uniprot,1835 uniprot,1879 xenoMrna,92 xenoMrna,192 xenoMrna,327 xenoMrna,346 xenoMrna,355 xenoRefGene,130 order gap,79 gold,110 uniprot,872 organ est,195 est,201 intronEst,276 intronEst,282 mrna,141 mrna,147 xenoMrna,216 xenoMrna,222 organism chainHg19,330 chainHg19,360 chainNetHg19,333 chainNetHg19,363 evaSnp4,717 evaSnp5,717 netHg19,330 netHg19,360 organisms chainHg19,905 chainNetHg19,908 evaSnp4,385 evaSnp5,385 nestedRepeats,295 netHg19,905 rmsk,302 transMapEnsemblV5,159 transMapEnsemblV5,216 transMapEstV5,128 transMapEstV5,185 transMapRefSeqV5,128 transMapRefSeqV5,185 transMapRnaV5,128 transMapRnaV5,185 transMapV5,64 transMapV5,152 transMapV5,234 transMapV5,291 uniprot,998 xenoMrna,25 xenoRefGene,20 organized refSeqComposite,1373 organizes chainHg19,614 chainNetHg19,617 netHg19,614 orientation chainHg19,547 chainNetHg19,550 cytoBandIdeo,6 gap,81 gold,112 netHg19,547 xenoMrna,73 xenoMrna,95 orientations xenoMrna,105 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 orthologous transMapEnsemblV5,87 transMapEstV5,56 transMapRefSeqV5,56 transMapRnaV5,56 transMapV5,57 orthologs chainHg19,284 chainNetHg19,287 netHg19,284 transMapV5,94 ostell est,753 est,777 intronEst,837 intronEst,861 mrna,470 mrna,494 xenoMrna,545 xenoMrna,569 other augustusGene,208 chainHg19,24 chainHg19,412 chainHg19,505 chainNetHg19,27 chainNetHg19,415 chainNetHg19,508 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 ncbiRefSeqOther,2 ncbiRefSeqOther,5 nestedRepeats,376 netHg19,24 netHg19,412 netHg19,505 refSeqComposite,274 refSeqComposite,378 refSeqComposite,381 refSeqComposite,1367 refSeqComposite,1393 rmsk,195 rmsk,399 transMapEnsemblV5,30 transMapEnsemblV5,46 transMapEnsemblV5,368 transMapEstV5,28 transMapEstV5,337 transMapRefSeqV5,28 transMapRefSeqV5,337 transMapRnaV5,28 transMapRnaV5,337 transMapV5,27 transMapV5,443 unipOther,1 unipOther,4 uniprot,90 uniprot,122 uniprot,205 uniprot,319 uniprot,393 uniprot,396 uniprot,862 uniprot,1200 xenoMrna,1 xenoMrna,26 xenoRefGene,1 xenoRefGene,21 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 uniprot,1312 uniprot,1344 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 est,678 intronEst,759 transMapEnsemblV5,246 transMapEstV5,215 transMapRefSeqV5,215 transMapRnaV5,215 transMapV5,321 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 ensGene,26 ensGene,84 ensGene,91 ensGene,113 ensGene,124 ensGene,130 ensGene,141 evaSnp4,1007 evaSnp4,1013 evaSnp4,1020 evaSnp4,1045 evaSnp4,1067 evaSnp5,1007 evaSnp5,1013 evaSnp5,1020 evaSnp5,1045 evaSnp5,1067 genscan,58 refGene,78 refSeqComposite,137 refSeqComposite,1321 refSeqComposite,1328 refSeqComposite,1344 refSeqComposite,1359 refSeqComposite,1483 refSeqComposite,1503 refSeqComposite,1624 refSeqComposite,1677 refSeqComposite,1684 refSeqComposite,1702 rmsk,124 rmsk,129 transMapEnsemblV5,556 transMapEnsemblV5,562 transMapEnsemblV5,572 transMapEnsemblV5,611 transMapEstV5,525 transMapEstV5,531 transMapEstV5,541 transMapEstV5,580 transMapRefSeqV5,525 transMapRefSeqV5,531 transMapRefSeqV5,541 transMapRefSeqV5,580 transMapRnaV5,525 transMapRnaV5,531 transMapRnaV5,541 transMapRnaV5,580 transMapV5,631 transMapV5,637 transMapV5,647 transMapV5,686 uniprot,891 uniprot,1697 uniprot,1765 uniprot,1829 uniprot,1836 uniprot,1870 uniprot,1874 out chainHg19,634 chainNetHg19,637 netHg19,634 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 windowmaskerSdust,63 windowmaskerSdust,72 outputs rmsk,35 outside est,614 intronEst,695 refSeqComposite,686 uniprot,558 over chainHg19,195 chainHg19,649 chainNetHg19,198 chainNetHg19,652 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 evaSnp4,302 evaSnp5,302 netHg19,195 netHg19,649 refSeqComposite,1031 uniprot,522 uniprot,536 overlapping chainHg19,112 chainHg19,175 chainNetHg19,115 chainNetHg19,178 netHg19,112 netHg19,175 oviari3 ensGene,80 evaSnp4,43 evaSnp4,1117 evaSnp5,43 evaSnp5,1117 refSeqComposite,1549 refSeqComposite,1613 transMapEnsemblV5,203 transMapEnsemblV5,662 transMapEstV5,172 transMapEstV5,631 transMapRefSeqV5,172 transMapRefSeqV5,631 transMapRnaV5,172 transMapRnaV5,631 transMapV5,278 transMapV5,737 uniprot,1816 oviari3.ensembl.transmapv4.bigpsl transMapEnsemblV5,590 transMapEstV5,559 transMapRefSeqV5,559 transMapRnaV5,559 oviari3.ensembl.transmapv5.bigpsl transMapV5,665 oviari3.est.transmapv4.bigpsl transMapEnsemblV5,599 transMapEstV5,568 transMapRefSeqV5,568 transMapRnaV5,568 oviari3.est.transmapv5.bigpsl transMapV5,674 oviari3.fa windowmaskerSdust,62 windowmaskerSdust,71 oviari3.refseq.transmapv4.bigpsl transMapEnsemblV5,593 transMapEnsemblV5,665 transMapEstV5,562 transMapEstV5,634 transMapRefSeqV5,562 transMapRefSeqV5,634 transMapRnaV5,562 transMapRnaV5,634 oviari3.refseq.transmapv5.bigpsl transMapV5,668 transMapV5,740 oviari3.rna.transmapv4.bigpsl transMapEnsemblV5,596 transMapEstV5,565 transMapRefSeqV5,565 transMapRnaV5,565 oviari3.rna.transmapv5.bigpsl transMapV5,671 own uniprot,724 p genscan,205 nestedRepeats,329 rmsk,352 pac chainHg19,1033 chainNetHg19,1036 netHg19,1033 pack chainHg19,231 chainNetHg19,234 nestedRepeats,116 netHg19,231 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 ensGene,127 ensGene,166 est,110 est,422 est,443 evaSnp4,218 evaSnp5,218 genscan,78 genscan,123 intronEst,191 intronEst,503 intronEst,524 mrna,56 mrna,361 mrna,382 refGene,54 refGene,138 refGene,229 refSeqComposite,113 refSeqComposite,738 refSeqComposite,863 refSeqComposite,1123 refSeqComposite,1641 rmsk,77 uniprot,236 uniprot,651 uniprot,1158 uniprot,1585 uniprot,2027 xenoMrna,131 xenoMrna,436 xenoMrna,457 xenoRefGene,98 xenoRefGene,189 pages chainHg19,770 chainNetHg19,773 netHg19,770 pair gap,95 pairwise chainHg19,1011 chainHg19,1029 chainNetHg19,1014 chainNetHg19,1032 netHg19,1011 netHg19,1029 transMapEnsemblV5,336 transMapEstV5,305 transMapRefSeqV5,305 transMapRnaV5,305 transMapV5,83 transMapV5,411 paper animalQtl,345 papers animalQtl,124 paralogous transMapEnsemblV5,300 transMapEstV5,269 transMapRefSeqV5,269 transMapRnaV5,269 transMapV5,375 paralogs chainHg19,224 chainNetHg19,227 netHg19,224 transMapV5,160 parameters animalQtl,161 windowmaskerSdust,57 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 evaSnp4,656 evaSnp5,656 parenthesis gold,147 park animalQtl,190 animalQtl,322 animalQtl,366 part animalQtl,83 animalQtl,130 chainHg19,271 chainNetHg19,274 netHg19,271 refSeqComposite,523 particular augustusGene,234 chainHg19,197 chainNetHg19,200 netHg19,197 refSeqComposite,296 uniprot,1019 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts chainHg19,39 chainHg19,50 chainNetHg19,42 chainNetHg19,53 netHg19,39 netHg19,50 xenoMrna,68 passed evaSnp4,706 evaSnp5,706 past uniprot,1690 patch uniprot,1423 patches uniprot,1432 patterns augustusGene,56 pennsylvania chainHg19,916 chainHg19,1019 chainNetHg19,919 chainNetHg19,1022 netHg19,916 netHg19,1019 peptide unipLocSignal,2 uniprot,477 uniprot,565 peptides unipLocSignal,5 uniprot,239 uniprot,512 percent gc5BaseBw,2 gc5BaseBw,4 gc5BaseBw,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5BaseBw,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 est,605 intronEst,686 period microsat,65 permitted rmsk,314 persepective evaSnp4,914 evaSnp5,914 perspective evaSnp4,903 evaSnp5,903 ph.d chainHg19,1016 chainNetHg19,1019 netHg19,1016 pharmaceuticals uniprot,1969 phenotype animalQtl,29 animalQtl,149 uniprot,432 phenotypes animalQtl,340 phosphorylation uniprot,590 phylofit transMapEnsemblV5,228 transMapEstV5,197 transMapRefSeqV5,197 transMapRnaV5,197 transMapV5,303 pia uniprot,1971 pick uniprot,1089 pig animalQtl,88 pigqtldb animalQtl,310 pigs animalQtl,309 pipeline refSeqComposite,1189 uniprot,1537 pipelines uniprot,1850 place chainHg19,789 chainNetHg19,792 netHg19,789 placed chainHg19,831 chainNetHg19,834 netHg19,831 placement refSeqComposite,964 places est,687 intronEst,768 mrna,403 refGene,283 refSeqComposite,1251 xenoMrna,477 xenoRefGene,243 plasmid est,466 intronEst,547 platform animalQtl,413 please ensGene,41 ensGene,160 evaSnp4,1010 evaSnp5,1010 refGene,44 refSeqComposite,102 refSeqComposite,1109 refSeqComposite,1681 uniprot,685 uniprot,1439 uniprot,1826 plos transMapEnsemblV5,808 transMapEstV5,777 transMapRefSeqV5,777 transMapRnaV5,777 transMapV5,883 plus refSeqComposite,898 pmc animalQtl,400 chainHg19,1078 chainHg19,1109 chainNetHg19,1081 chainNetHg19,1112 ensGene,206 est,769 est,795 est,813 evaSnp4,1252 evaSnp5,1252 intronEst,853 intronEst,879 intronEst,897 microsat,136 mrna,486 mrna,512 mrna,530 netHg19,1078 netHg19,1109 refGene,356 refGene,398 refGene,432 refSeqComposite,1743 refSeqComposite,1785 refSeqComposite,1819 simpleRepeat,96 transMapEnsemblV5,752 transMapEnsemblV5,818 transMapEstV5,721 transMapEstV5,787 transMapRefSeqV5,721 transMapRefSeqV5,787 transMapRnaV5,721 transMapRnaV5,787 transMapV5,827 transMapV5,893 uniprot,2008 xenoMrna,561 xenoMrna,587 xenoMrna,605 xenoRefGene,315 xenoRefGene,357 xenoRefGene,391 pmc148217 microsat,137 simpleRepeat,97 pmc187518 est,814 intronEst,898 mrna,531 refGene,357 refSeqComposite,1744 xenoMrna,606 xenoRefGene,316 pmc208784 chainHg19,1079 chainNetHg19,1082 netHg19,1079 pmc2099585 transMapEnsemblV5,753 transMapEstV5,722 transMapRefSeqV5,722 transMapRnaV5,722 transMapV5,828 pmc2134963 transMapEnsemblV5,819 transMapEstV5,788 transMapRefSeqV5,788 transMapRnaV5,788 transMapV5,894 pmc308779 est,796 intronEst,880 mrna,513 xenoMrna,588 pmc3245120 uniprot,2009 pmc3531174 animalQtl,401 pmc3531190 est,770 intronEst,854 mrna,487 xenoMrna,562 pmc3965018 refGene,399 refSeqComposite,1786 xenoRefGene,358 pmc430961 chainHg19,1110 chainNetHg19,1113 netHg19,1110 pmc4848401 evaSnp4,1253 evaSnp5,1253 pmc539979 refGene,433 refSeqComposite,1820 xenoRefGene,392 pmc8728205 evaSnp4,1213 evaSnp5,1213 pmc99161 ensGene,207 pmid animalQtl,318 animalQtl,398 animalQtl,433 augustusGene,314 augustusGene,339 chainHg19,1038 chainHg19,1076 chainHg19,1107 chainNetHg19,1041 chainNetHg19,1079 chainNetHg19,1110 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 ensGene,204 est,767 est,793 est,811 evaSnp4,1210 evaSnp4,1212 evaSnp4,1250 evaSnp5,1210 evaSnp5,1212 evaSnp5,1250 genscan,229 intronEst,851 intronEst,877 intronEst,895 microsat,134 mrna,484 mrna,510 mrna,528 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netHg19,1038 netHg19,1076 netHg19,1107 refGene,354 refGene,396 refGene,430 refSeqComposite,1741 refSeqComposite,1783 refSeqComposite,1817 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 transMapEnsemblV5,750 transMapEnsemblV5,782 transMapEnsemblV5,816 transMapEstV5,719 transMapEstV5,751 transMapEstV5,785 transMapRefSeqV5,719 transMapRefSeqV5,751 transMapRefSeqV5,785 transMapRnaV5,719 transMapRnaV5,751 transMapRnaV5,785 transMapV5,825 transMapV5,857 transMapV5,891 uniprot,2006 uniprot,2050 windowmaskerSdust,113 xenoMrna,559 xenoMrna,585 xenoMrna,603 xenoRefGene,313 xenoRefGene,355 xenoRefGene,389 point est,548 intronEst,629 rmsk,269 poly-a augustusGene,62 est,500 est,574 intronEst,581 intronEst,655 polymorphic microsat,41 simpleRepeat,46 polymorphisms evaSnp4,113 evaSnp5,113 polypeptide unipChain,6 uniprot,287 uniprot,289 population microsat,44 position chainHg19,705 chainNetHg19,708 evaSnp4,201 evaSnp5,201 netHg19,705 refSeqComposite,983 uniprot,610 positions uniprot,1495 possible chainHg19,406 chainNetHg19,409 evaSnp4,367 evaSnp4,415 evaSnp4,744 evaSnp5,367 evaSnp5,415 evaSnp5,744 netHg19,406 refSeqComposite,185 uniprot,601 possibly chainHg19,283 chainNetHg19,286 netHg19,283 simpleRepeat,18 post-alignment transMapEnsemblV5,303 transMapEstV5,272 transMapRefSeqV5,272 transMapRnaV5,272 transMapV5,378 post-genome animalQtl,387 post-processing uniprot,295 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 potentially evaSnp4,425 evaSnp5,425 pre-mrna genscan,185 precompiled evaSnp4,1082 evaSnp5,1082 refSeqComposite,1518 transMapEnsemblV5,626 transMapEstV5,595 transMapRefSeqV5,595 transMapRnaV5,595 transMapV5,701 uniprot,1780 predict evaSnp4,713 evaSnp5,713 predicted cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 evaSnp4,752 evaSnp4,872 evaSnp4,1142 evaSnp5,752 evaSnp5,872 evaSnp5,1142 ncbiRefSeq,8 ncbiRefSeqPredicted,2 ncbiRefSeqPredicted,6 refGene,108 refSeqComposite,203 refSeqComposite,339 refSeqComposite,358 refSeqComposite,403 refSeqComposite,589 refSeqComposite,615 refSeqComposite,691 refSeqComposite,711 refSeqComposite,1411 refSeqComposite,1671 uniprot,48 uniprot,193 xenoMrna,112 xenoRefGene,68 prediction augustusGene,321 evaSnp4,429 evaSnp5,429 genscan,73 genscan,211 refGene,93 refSeqComposite,375 refSeqComposite,600 transMapEnsemblV5,84 transMapEstV5,53 transMapRefSeqV5,53 transMapRnaV5,53 transMapV5,54 xenoRefGene,53 predictions augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 ensGene,8 ensGene,12 ensGene,40 evaSnp4,378 evaSnp5,378 genscan,5 genscan,9 genscan,14 genscan,24 genscan,112 genscan,118 ncbiRefSeq,18 ncbiRefSeqCurated,16 ncbiRefSeqGenomicDiff,15 ncbiRefSeqOther,18 ncbiRefSeqPredicted,14 ncbiRefSeqPsl,10 refGene,14 refGene,195 refGene,224 refSeqComposite,10 refSeqComposite,829 refSeqComposite,858 transMapEnsemblV5,13 transMapEstV5,11 transMapRefSeqV5,12 transMapRnaV5,12 transMapV5,10 unipAliSwissprot,21 unipAliTrembl,13 unipChain,11 unipConflict,9 unipDisulfBond,9 unipDomain,7 unipInterest,9 unipLocCytopl,8 unipLocExtra,8 unipLocSignal,9 unipLocTransMemb,8 unipModif,10 unipMut,9 unipOther,9 unipRepeat,7 unipStruct,11 uniprot,10 xenoRefGene,9 xenoRefGene,155 xenoRefGene,184 prepared gc5BaseBw,80 ucscToRefSeq,43 uniprot,712 present cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5BaseBw,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous ensGene,132 evaSnp4,412 evaSnp4,741 evaSnp5,412 evaSnp5,741 refSeqComposite,1220 refSeqComposite,1335 refSeqComposite,1690 uniprot,1654 previously chainHg19,909 chainNetHg19,912 netHg19,909 refSeqComposite,500 primary unipStruct,4 uniprot,360 primed est,492 intronEst,573 primer est,479 intronEst,560 priming est,575 intronEst,656 principal gap,120 pringle transMapEnsemblV5,792 transMapEstV5,761 transMapRefSeqV5,761 transMapRnaV5,761 transMapV5,867 print evaSnp4,1209 evaSnp5,1209 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 pro evaSnp4,897 evaSnp4,911 evaSnp5,897 evaSnp5,911 problem uniprot,1359 uniprot,1389 proc chainHg19,1063 chainNetHg19,1066 netHg19,1063 procedure uniprot,990 procedures gap,22 gold,24 process animalQtl,134 chainHg19,813 chainNetHg19,816 netHg19,813 refSeqComposite,647 uniprot,321 uniprot,879 uniprot,905 uniprot,1229 uniprot,1448 processed chainHg19,212 chainNetHg19,215 netHg19,212 processing evaSnp4,941 evaSnp5,941 refSeqComposite,1333 produced est,725 evaSnp4,1131 evaSnp5,1131 intronEst,809 mrna,442 refGene,321 refSeqComposite,383 refSeqComposite,1710 transMapEnsemblV5,22 transMapEnsemblV5,677 transMapEnsemblV5,701 transMapEstV5,20 transMapEstV5,646 transMapEstV5,670 transMapRefSeqV5,20 transMapRefSeqV5,646 transMapRefSeqV5,670 transMapRnaV5,20 transMapRnaV5,646 transMapRnaV5,670 transMapV5,19 transMapV5,141 transMapV5,752 transMapV5,776 xenoMrna,81 xenoMrna,517 xenoRefGene,281 produces refSeqComposite,48 production animalQtl,358 products unipChain,5 program augustusGene,21 augustusGene,257 chainHg19,605 chainHg19,645 chainHg19,783 chainHg19,836 chainHg19,868 chainHg19,944 chainHg19,947 chainNetHg19,608 chainNetHg19,648 chainNetHg19,786 chainNetHg19,839 chainNetHg19,871 chainNetHg19,947 chainNetHg19,950 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 genscan,18 genscan,137 genscan,178 microsat,100 microsat,120 mrna,395 nestedRepeats,30 netHg19,605 netHg19,645 netHg19,783 netHg19,836 netHg19,868 netHg19,944 netHg19,947 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 transMapEnsemblV5,313 transMapEstV5,282 transMapRefSeqV5,282 transMapRnaV5,282 transMapV5,388 uniprot,1529 programmatic ensGene,99 programmatically refSeqComposite,1319 programs chainHg19,993 chainNetHg19,996 netHg19,993 uniprot,1877 project animalQtl,263 ensGene,194 refGene,338 refSeqComposite,1158 refSeqComposite,1725 xenoRefGene,298 projected uniprot,800 projection transMapEnsemblV5,57 transMapEnsemblV5,320 transMapEstV5,289 transMapRefSeqV5,289 transMapRnaV5,289 transMapV5,395 projects est,569 est,588 est,618 intronEst,650 intronEst,669 intronEst,699 transMapEnsemblV5,709 transMapEstV5,678 transMapRefSeqV5,678 transMapRnaV5,678 transMapV5,784 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 pronounced uniprot,1392 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 proper evaSnp4,695 evaSnp5,695 properties refSeqComposite,718 prot.bed uniprot,1931 uniprot,1933 protein refSeqComposite,268 refSeqComposite,361 unipChain,4 unipStruct,3 uniprot,5 uniprot,15 uniprot,84 uniprot,95 uniprot,111 uniprot,113 uniprot,137 uniprot,153 uniprot,194 uniprot,196 uniprot,252 uniprot,256 uniprot,267 uniprot,278 uniprot,293 uniprot,324 uniprot,359 uniprot,635 uniprot,672 uniprot,742 uniprot,760 uniprot,780 uniprot,790 uniprot,906 uniprot,916 uniprot,954 uniprot,966 uniprot,970 uniprot,1020 uniprot,1037 uniprot,1072 uniprot,1099 uniprot,1218 uniprot,1241 uniprot,1244 uniprot,1333 uniprot,1607 uniprot,1635 uniprot,1854 uniprot,1888 uniprot,1989 uniprot,1994 uniprot,2041 xenoMrna,80 xenoMrna,113 protein-altering evaSnp4,449 evaSnp4,758 evaSnp5,449 evaSnp5,758 protein-coding augustusGene,73 refGene,23 refGene,237 refSeqComposite,20 refSeqComposite,236 refSeqComposite,539 xenoRefGene,15 xenoRefGene,197 protein-genome uniprot,875 uniprot,1174 protein-protein uniprot,315 protein-to-genome uniprot,1703 proteins refGene,419 refSeqComposite,1806 unipAliSwissprot,7 unipAliTrembl,7 uniprot,243 uniprot,744 uniprot,925 uniprot,929 uniprot,1005 uniprot,1188 uniprot,1364 uniprot,1385 uniprot,1404 uniprot,1470 xenoRefGene,378 protocadherin refSeqComposite,416 provide uniprot,1860 provided evaSnp4,830 evaSnp5,830 refSeqComposite,37 refSeqComposite,68 refSeqComposite,205 refSeqComposite,443 uniprot,817 provides gap,32 gold,34 uniprot,489 providing augustusGene,254 ensGene,153 genscan,175 nestedRepeats,312 rmsk,335 provisional refGene,110 refSeqComposite,617 refSeqComposite,666 xenoRefGene,70 pruitt refGene,358 refGene,400 refSeqComposite,1745 refSeqComposite,1787 xenoRefGene,317 xenoRefGene,359 pseudogenes chainHg19,213 chainHg19,227 chainNetHg19,216 chainNetHg19,230 netHg19,213 netHg19,227 refSeqComposite,408 uniprot,1184 psl est,54 intronEst,138 mrna,35 refSeqComposite,453 refSeqComposite,1175 refSeqComposite,1416 transMapEnsemblV5,102 transMapEstV5,71 transMapRefSeqV5,71 transMapRnaV5,71 transMapV5,177 uniprot,1479 xenoMrna,40 pslcdnafilter transMapEnsemblV5,351 transMapEstV5,320 transMapRefSeqV5,320 transMapRnaV5,320 transMapV5,426 pslmap transMapEnsemblV5,312 transMapEstV5,281 transMapRefSeqV5,281 transMapRnaV5,281 transMapV5,387 uniprot,889 uniprot,1497 uniprot,1528 uniprot,1880 uniprot,1900 pslreps uniprot,1482 uniprot,1502 public animalQtl,142 animalQtl,412 cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 ensGene,114 est,736 intronEst,820 mrna,453 refSeqComposite,1322 refSeqComposite,1625 transMapEnsemblV5,693 transMapEstV5,662 transMapRefSeqV5,662 transMapRnaV5,662 transMapV5,768 uniprot,709 xenoMrna,528 publication animalQtl,133 publications refSeqComposite,253 refSeqComposite,423 uniprot,38 publicly animalQtl,22 nestedRepeats,275 published animalQtl,122 animalQtl,346 pull-down refGene,211 refSeqComposite,845 xenoRefGene,171 purpose simpleRepeat,32 q uniprot,1904 uniprot,1914 q99697 uniprot,1926 qgap chainHg19,717 chainNetHg19,720 netHg19,717 qtl animalQtl,2 animalQtl,28 animalQtl,112 animalQtl,144 animalQtl,303 animalQtl,381 animalQtl,415 qtldb animalQtl,19 animalQtl,87 animalQtl,117 animalQtl,330 animalQtl,373 animalQtl,407 quality animalQtl,176 est,72 mrna,53 xenoMrna,58 quantitative animalQtl,4 animalQtl,15 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 ensGene,105 evaSnp4,1005 evaSnp5,1005 transMapEnsemblV5,560 transMapEstV5,529 transMapRefSeqV5,529 transMapRnaV5,529 transMapV5,635 query rmsk,47 rmsk,61 uniprot,1484 xenoMrna,76 questions evaSnp4,1018 evaSnp5,1018 refSeqComposite,1689 uniprot,1834 quickly mrna,338 refGene,190 refSeqComposite,824 transMapEnsemblV5,122 transMapEstV5,91 transMapRefSeqV5,91 transMapRnaV5,91 transMapV5,197 xenoMrna,413 xenoRefGene,150 quite simpleRepeat,45 quot chainHg19,26 chainHg19,28 chainHg19,33 chainHg19,35 chainHg19,101 chainHg19,103 chainHg19,230 chainHg19,232 chainHg19,234 chainHg19,236 chainHg19,338 chainHg19,340 chainHg19,679 chainHg19,681 chainNetHg19,29 chainNetHg19,31 chainNetHg19,36 chainNetHg19,38 chainNetHg19,104 chainNetHg19,106 chainNetHg19,233 chainNetHg19,235 chainNetHg19,237 chainNetHg19,239 chainNetHg19,341 chainNetHg19,343 chainNetHg19,682 chainNetHg19,684 est,238 est,240 est,289 est,291 est,305 est,307 est,341 est,343 est,358 est,360 evaSnp4,805 evaSnp4,807 evaSnp5,805 evaSnp5,807 gc5BaseBw,58 gc5BaseBw,62 intronEst,319 intronEst,321 intronEst,370 intronEst,372 intronEst,386 intronEst,388 intronEst,422 intronEst,424 intronEst,439 intronEst,441 mrna,184 mrna,186 mrna,235 mrna,237 mrna,251 mrna,253 mrna,287 mrna,289 mrna,304 mrna,306 netHg19,26 netHg19,28 netHg19,33 netHg19,35 netHg19,101 netHg19,103 netHg19,230 netHg19,232 netHg19,234 netHg19,236 netHg19,338 netHg19,340 netHg19,679 netHg19,681 refSeqComposite,504 refSeqComposite,507 refSeqComposite,1430 refSeqComposite,1432 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 uniprot,63 uniprot,66 uniprot,261 uniprot,263 uniprot,272 uniprot,274 uniprot,283 uniprot,285 uniprot,412 uniprot,416 uniprot,423 uniprot,426 uniprot,431 uniprot,435 uniprot,437 uniprot,441 uniprot,468 uniprot,470 uniprot,471 uniprot,474 uniprot,475 uniprot,478 uniprot,572 uniprot,575 windowmaskerSdust,82 windowmaskerSdust,84 xenoMrna,259 xenoMrna,261 xenoMrna,310 xenoMrna,312 xenoMrna,326 xenoMrna,328 xenoMrna,362 xenoMrna,364 xenoMrna,379 xenoMrna,381 r animalQtl,192 augustusGene,291 chainHg19,1043 chainHg19,1089 chainNetHg19,1046 chainNetHg19,1092 nestedRepeats,327 netHg19,1043 netHg19,1089 rmsk,350 transMapEnsemblV5,759 transMapEstV5,728 transMapRefSeqV5,728 transMapRnaV5,728 transMapV5,834 windowmaskerSdust,99 r.s chainHg19,1008 chainNetHg19,1011 netHg19,1008 random augustusGene,119 est,571 intronEst,652 random-primed est,617 intronEst,698 raney evaSnp4,1216 evaSnp5,1216 uniprot,1960 range evaSnp4,1111 evaSnp5,1111 gap,135 nestedRepeats,227 nestedRepeats,236 refSeqComposite,984 transMapEnsemblV5,655 transMapEstV5,624 transMapRefSeqV5,624 transMapRnaV5,624 transMapV5,730 uniprot,1809 ranked chainHg19,780 chainNetHg19,783 netHg19,780 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rather est,572 intronEst,653 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 raw refSeqComposite,1288 transMapEnsemblV5,518 transMapEstV5,487 transMapRefSeqV5,487 transMapRnaV5,487 transMapV5,593 uniprot,1708 rc chainHg19,1091 chainNetHg19,1094 netHg19,1091 rmsk,200 read est,470 evaSnp4,945 evaSnp5,945 gap,94 intronEst,551 refSeqComposite,1457 realigning refSeqComposite,50 realignment refSeqComposite,58 refSeqComposite,485 rearrangement chainHg19,289 chainHg19,492 chainHg19,1056 chainNetHg19,292 chainNetHg19,495 chainNetHg19,1059 netHg19,289 netHg19,492 netHg19,1056 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably est,538 est,561 intronEst,619 intronEst,642 recently uniprot,1186 reciprocal transMapEnsemblV5,239 transMapEstV5,208 transMapRefSeqV5,208 transMapRnaV5,208 transMapV5,65 transMapV5,314 recommeneded evaSnp4,957 evaSnp5,957 record refGene,105 refSeqComposite,612 refSeqComposite,633 refSeqComposite,669 refSeqComposite,694 refSeqComposite,709 uniprot,496 xenoRefGene,65 records refGene,68 refSeqComposite,127 refSeqComposite,658 reduced intronEst,104 reecy animalQtl,197 animalQtl,282 animalQtl,300 animalQtl,327 animalQtl,370 animalQtl,404 ref evaSnp4,523 evaSnp4,544 evaSnp4,573 evaSnp4,594 evaSnp4,609 evaSnp4,628 evaSnp4,648 evaSnp5,523 evaSnp5,544 evaSnp5,573 evaSnp5,594 evaSnp5,609 evaSnp5,628 evaSnp5,648 refer ensGene,42 evaSnp4,1011 evaSnp5,1011 genscan,144 refSeqComposite,1682 uniprot,1827 reference evaSnp4,97 evaSnp4,228 evaSnp4,492 evaSnp4,521 evaSnp4,571 evaSnp5,97 evaSnp5,228 evaSnp5,492 evaSnp5,521 evaSnp5,571 ncbiRefSeqGenomicDiff,10 refGene,32 refGene,51 refGene,385 refGene,407 refSeqComposite,29 refSeqComposite,110 refSeqComposite,463 refSeqComposite,876 refSeqComposite,1086 refSeqComposite,1772 refSeqComposite,1794 ucscToRefSeq,23 uniprot,1378 uniprot,1422 xenoRefGene,29 xenoRefGene,344 xenoRefGene,366 references animalQtl,287 augustusGene,285 chainHg19,1006 chainNetHg19,1009 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 ensGene,52 ensGene,167 est,742 evaSnp4,1159 evaSnp5,1159 genscan,152 genscan,179 intronEst,826 microsat,113 mrna,459 nestedRepeats,66 nestedRepeats,323 netHg19,1006 refGene,339 refSeqComposite,1726 rmsk,102 rmsk,346 simpleRepeat,73 transMapEnsemblV5,710 transMapEstV5,679 transMapRefSeqV5,679 transMapRnaV5,679 transMapV5,785 uniprot,1984 windowmaskerSdust,89 xenoMrna,534 xenoRefGene,299 refgene refSeqComposite,1415 transMapEnsemblV5,592 transMapEstV5,561 transMapRefSeqV5,2 transMapRefSeqV5,561 transMapRnaV5,561 transMapV5,667 reflects rmsk,213 refseq evaSnp4,393 evaSnp4,407 evaSnp4,720 evaSnp4,736 evaSnp4,859 evaSnp4,1152 evaSnp5,393 evaSnp5,407 evaSnp5,720 evaSnp5,736 evaSnp5,859 evaSnp5,1152 ncbiRefSeq,1 ncbiRefSeq,4 ncbiRefSeqCurated,1 ncbiRefSeqCurated,4 ncbiRefSeqGenomicDiff,1 ncbiRefSeqGenomicDiff,6 ncbiRefSeqOther,1 ncbiRefSeqOther,4 ncbiRefSeqPredicted,1 ncbiRefSeqPredicted,4 ncbiRefSeqPsl,1 ncbiRefSeqPsl,3 refGene,2 refGene,6 refGene,17 refGene,35 refGene,53 refGene,67 refGene,104 refGene,256 refGene,337 refGene,380 refGene,409 refSeqComposite,2 refSeqComposite,3 refSeqComposite,14 refSeqComposite,32 refSeqComposite,39 refSeqComposite,44 refSeqComposite,52 refSeqComposite,83 refSeqComposite,86 refSeqComposite,112 refSeqComposite,126 refSeqComposite,188 refSeqComposite,195 refSeqComposite,197 refSeqComposite,207 refSeqComposite,208 refSeqComposite,213 refSeqComposite,313 refSeqComposite,334 refSeqComposite,338 refSeqComposite,343 refSeqComposite,377 refSeqComposite,386 refSeqComposite,398 refSeqComposite,402 refSeqComposite,432 refSeqComposite,437 refSeqComposite,446 refSeqComposite,455 refSeqComposite,467 refSeqComposite,478 refSeqComposite,505 refSeqComposite,509 refSeqComposite,518 refSeqComposite,526 refSeqComposite,543 refSeqComposite,545 refSeqComposite,551 refSeqComposite,578 refSeqComposite,584 refSeqComposite,586 refSeqComposite,588 refSeqComposite,592 refSeqComposite,611 refSeqComposite,625 refSeqComposite,632 refSeqComposite,657 refSeqComposite,668 refSeqComposite,693 refSeqComposite,708 refSeqComposite,865 refSeqComposite,881 refSeqComposite,1092 refSeqComposite,1112 refSeqComposite,1127 refSeqComposite,1141 refSeqComposite,1144 refSeqComposite,1157 refSeqComposite,1164 refSeqComposite,1195 refSeqComposite,1205 refSeqComposite,1210 refSeqComposite,1221 refSeqComposite,1224 refSeqComposite,1352 refSeqComposite,1366 refSeqComposite,1369 refSeqComposite,1404 refSeqComposite,1407 refSeqComposite,1410 refSeqComposite,1414 refSeqComposite,1418 refSeqComposite,1568 refSeqComposite,1665 refSeqComposite,1667 refSeqComposite,1670 refSeqComposite,1724 refSeqComposite,1767 refSeqComposite,1796 transMapEnsemblV5,169 transMapEnsemblV5,704 transMapEstV5,138 transMapEstV5,673 transMapRefSeqV5,4 transMapRefSeqV5,17 transMapRefSeqV5,138 transMapRefSeqV5,673 transMapRnaV5,138 transMapRnaV5,673 transMapV5,244 transMapV5,779 ucscToRefSeq,1 ucscToRefSeq,3 ucscToRefSeq,26 uniprot,823 uniprot,828 uniprot,841 uniprot,845 uniprot,857 uniprot,864 uniprot,1002 uniprot,1010 uniprot,1055 uniprot,1207 uniprot,1236 uniprot,1276 uniprot,1290 xenoRefGene,2 xenoRefGene,4 xenoRefGene,32 xenoRefGene,64 xenoRefGene,297 xenoRefGene,339 xenoRefGene,368 refseqdiffs refSeqComposite,1471 refseqother refSeqComposite,1469 regeneron uniprot,1968 region chainHg19,198 chainHg19,395 chainNetHg19,201 chainNetHg19,398 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 evaSnp4,462 evaSnp4,786 evaSnp5,462 evaSnp5,786 netHg19,198 netHg19,395 refSeqComposite,987 refSeqComposite,1538 uniprot,312 regions augustusGene,76 chainHg19,16 chainHg19,134 chainHg19,282 chainNetHg19,19 chainNetHg19,137 chainNetHg19,285 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 evaSnp4,1057 evaSnp5,1057 genscan,48 microsat,14 netHg19,16 netHg19,134 netHg19,282 refSeqComposite,1491 simpleRepeat,39 transMapEnsemblV5,301 transMapEnsemblV5,601 transMapEstV5,270 transMapEstV5,570 transMapRefSeqV5,270 transMapRefSeqV5,570 transMapRnaV5,270 transMapRnaV5,570 transMapV5,376 transMapV5,676 unipInterest,3 uniprot,240 uniprot,297 uniprot,300 uniprot,328 uniprot,348 uniprot,368 uniprot,384 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 transMapV5,74 uniprot,551 relationship chainHg19,846 chainNetHg19,849 est,93 intronEst,174 netHg19,846 relative chainHg19,862 chainNetHg19,865 gap,78 gold,109 netHg19,862 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 release evaSnp4,3 evaSnp4,12 evaSnp4,38 evaSnp4,687 evaSnp4,948 evaSnp4,1137 evaSnp5,3 evaSnp5,12 evaSnp5,38 evaSnp5,687 evaSnp5,948 evaSnp5,1137 refSeqComposite,1114 uniprot,1589 releases uniprot,1561 uniprot,1686 relevant est,157 intronEst,238 mrna,103 uniprot,681 xenoMrna,178 remain uniprot,1189 remaining chainHg19,685 chainNetHg19,688 netHg19,685 removed chainHg19,576 chainNetHg19,579 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 evaSnp4,930 evaSnp5,930 netHg19,576 rmsk,279 uniprot,597 uniprot,1150 removes transMapEnsemblV5,306 transMapEstV5,275 transMapRefSeqV5,275 transMapRnaV5,275 transMapV5,381 renamed evaSnp4,932 evaSnp5,932 reorganizing uniprot,1987 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeated uniprot,386 uniprot,390 repeating rmsk,2 repeatmasker chainHg19,943 chainNetHg19,946 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netHg19,943 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats chainHg19,935 chainNetHg19,938 evaSnp4,16 evaSnp5,16 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netHg19,935 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 unipRepeat,1 unipRepeat,3 uniprot,383 uniprot,440 windowmaskerSdust,11 repeats.bed windowmaskerSdust,73 windowmaskerSdust,75 repetitive nestedRepeats,351 refSeqComposite,977 refSeqComposite,1005 rmsk,374 uniprot,1400 replaced evaSnp4,494 evaSnp5,494 reported evaSnp4,238 evaSnp5,238 reporting refSeqComposite,1089 repository animalQtl,410 represent chainHg19,132 chainHg19,159 chainHg19,442 chainHg19,447 chainNetHg19,135 chainNetHg19,162 chainNetHg19,445 chainNetHg19,450 est,38 intronEst,50 netHg19,132 netHg19,159 netHg19,442 netHg19,447 representation evaSnp4,508 evaSnp4,558 evaSnp5,508 evaSnp5,558 representative refSeqComposite,536 represented evaSnp4,128 evaSnp4,542 evaSnp4,592 evaSnp5,128 evaSnp5,542 evaSnp5,592 gap,69 rmsk,49 representing gap,112 reproducibility uniprot,1645 required refSeqComposite,906 refSeqComposite,920 requirements refSeqComposite,393 requiring intronEst,92 res animalQtl,391 chainHg19,1101 chainNetHg19,1104 ensGene,197 est,760 est,785 est,805 evaSnp4,1197 evaSnp5,1197 intronEst,844 intronEst,869 intronEst,889 microsat,127 mrna,477 mrna,502 mrna,522 netHg19,1101 refGene,348 refGene,389 refGene,422 refSeqComposite,1735 refSeqComposite,1776 refSeqComposite,1809 simpleRepeat,87 transMapEnsemblV5,744 transMapEstV5,713 transMapRefSeqV5,713 transMapRnaV5,713 transMapV5,819 uniprot,1999 xenoMrna,552 xenoMrna,577 xenoMrna,597 xenoRefGene,307 xenoRefGene,348 xenoRefGene,381 research nestedRepeats,54 refSeqComposite,1100 rmsk,90 residues uniprot,344 resolution evaSnp4,80 evaSnp5,80 resolve uniprot,1357 resolved uniprot,1284 resource animalQtl,304 evaSnp4,1188 evaSnp5,1188 uniprot,1995 uniprot,2033 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 ensGene,108 evaSnp4,1008 evaSnp5,1008 refSeqComposite,1306 restricted refSeqComposite,577 result chainHg19,172 chainNetHg19,175 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netHg19,172 refSeqComposite,60 transMapEnsemblV5,504 transMapEstV5,473 transMapRefSeqV5,473 transMapRnaV5,473 transMapV5,579 uniprot,798 uniprot,1065 uniprot,1170 resulting chainHg19,595 chainNetHg19,598 netHg19,595 refSeqComposite,284 transMapEnsemblV5,81 transMapEnsemblV5,334 transMapEnsemblV5,346 transMapEnsemblV5,491 transMapEstV5,50 transMapEstV5,303 transMapEstV5,315 transMapEstV5,460 transMapRefSeqV5,50 transMapRefSeqV5,303 transMapRefSeqV5,315 transMapRefSeqV5,460 transMapRnaV5,50 transMapRnaV5,303 transMapRnaV5,315 transMapRnaV5,460 transMapV5,51 transMapV5,409 transMapV5,421 transMapV5,566 uniprot,874 uniprot,1137 uniprot,1308 results refSeqComposite,1098 uniprot,1463 uniprot,1649 retained uniprot,795 retrieve est,580 intronEst,661 retroposons rmsk,173 reverse est,455 est,489 est,506 intronEst,536 intronEst,570 intronEst,587 reversed evaSnp4,894 evaSnp5,894 review refGene,102 refSeqComposite,609 refSeqComposite,629 refSeqComposite,646 refSeqComposite,677 refSeqComposite,702 xenoRefGene,62 reviewed refGene,112 refSeqComposite,620 refSeqComposite,630 refSeqComposite,636 xenoRefGene,72 reviews refSeqComposite,258 rhead evaSnp4,1220 evaSnp5,1220 rhemac8 evaSnp4,922 evaSnp5,922 riestra uniprot,1972 right refSeqComposite,971 rightmost refSeqComposite,1013 rm evaSnp4,1227 evaSnp5,1227 rna est,101 est,449 intronEst,182 intronEst,530 refGene,31 refGene,279 refGene,325 refSeqComposite,28 refSeqComposite,1085 refSeqComposite,1145 refSeqComposite,1206 refSeqComposite,1247 refSeqComposite,1655 rmsk,186 rmsk,189 transMapEnsemblV5,595 transMapEstV5,564 transMapRefSeqV5,564 transMapRnaV5,2 transMapRnaV5,5 transMapRnaV5,564 transMapV5,670 xenoRefGene,28 xenoRefGene,239 xenoRefGene,285 rna-seq refSeqComposite,74 refSeqComposite,365 rnas ncbiRefSeqPsl,6 refGene,7 refGene,257 refSeqComposite,53 refSeqComposite,438 refSeqComposite,487 refSeqComposite,1225 xenoRefGene,217 robert chainHg19,983 chainNetHg19,986 nestedRepeats,307 netHg19,983 rmsk,330 role uniprot,309 rolling rmsk,201 rosenbloom evaSnp4,1228 evaSnp5,1228 ross chainHg19,932 chainNetHg19,935 netHg19,932 rothschild animalQtl,243 animalQtl,298 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 rsid evaSnp4,194 evaSnp4,361 evaSnp5,194 evaSnp5,361 run chainHg19,648 chainNetHg19,651 netHg19,648 refSeqComposite,1605 windowmaskerSdust,53 runs evaSnp4,607 evaSnp5,607 s animalQtl,259 animalQtl,291 augustusGene,104 augustusGene,221 augustusGene,319 chainHg19,1051 chainHg19,1068 chainHg19,1081 chainNetHg19,1054 chainNetHg19,1071 chainNetHg19,1084 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 evaSnp4,260 evaSnp4,843 evaSnp4,1145 evaSnp4,1151 evaSnp4,1179 evaSnp5,260 evaSnp5,843 evaSnp5,1145 evaSnp5,1151 evaSnp5,1179 genscan,190 genscan,194 genscan,210 nestedRepeats,286 netHg19,1051 netHg19,1068 netHg19,1081 refSeqComposite,105 refSeqComposite,318 refSeqComposite,465 refSeqComposite,484 refSeqComposite,1119 refSeqComposite,1204 rmsk,18 rmsk,293 transMapEnsemblV5,729 transMapEstV5,698 transMapRefSeqV5,698 transMapRnaV5,698 transMapV5,804 uniprot,751 uniprot,774 saccharomyces augustusGene,223 safely refSeqComposite,1450 salzberg genscan,189 same chainHg19,521 chainHg19,536 chainNetHg19,524 chainNetHg19,539 nestedRepeats,143 netHg19,521 netHg19,536 refSeqComposite,1217 uniprot,608 uniprot,612 uniprot,641 uniprot,1173 xenoMrna,122 xenoMrna,127 sample augustusGene,133 sampling augustusGene,129 sanborn transMapEnsemblV5,786 transMapEstV5,755 transMapRefSeqV5,755 transMapRnaV5,755 transMapV5,861 santa chainHg19,956 chainHg19,1001 chainNetHg19,959 chainNetHg19,1004 netHg19,956 netHg19,1001 satellite rmsk,184 saunders evaSnp4,1170 evaSnp5,1170 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 sayers est,755 intronEst,839 mrna,472 xenoMrna,547 scaffold gap,124 gold,77 gold,118 scaffolds gap,127 sch windowmaskerSdust,94 scheib uniprot,2012 schwartz chainHg19,923 chainHg19,1080 chainNetHg19,926 chainNetHg19,1083 netHg19,923 netHg19,1080 sci chainHg19,1066 chainNetHg19,1069 netHg19,1066 science genscan,203 scientific refSeqComposite,281 uniprot,37 scientists est,740 intronEst,824 mrna,457 refGene,330 refSeqComposite,1717 transMapEnsemblV5,697 transMapEstV5,666 transMapRefSeqV5,666 transMapRnaV5,666 transMapV5,772 xenoMrna,532 xenoRefGene,290 score chainHg19,677 chainNetHg19,680 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netHg19,677 uniprot,950 uniprot,1116 uniprot,1317 uniprot,1349 uniprot,1491 scores uniprot,1085 scoring chainHg19,77 chainHg19,87 chainHg19,656 chainHg19,673 chainHg19,1028 chainNetHg19,80 chainNetHg19,90 chainNetHg19,659 chainNetHg19,676 chainNetHg19,1031 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netHg19,77 netHg19,87 netHg19,656 netHg19,673 netHg19,1028 scott chainHg19,922 chainNetHg19,925 netHg19,922 screens nestedRepeats,32 rmsk,22 script animalQtl,233 uniprot,1549 scrna rmsk,193 sdust windowmaskerSdust,2 windowmaskerSdust,8 windowmaskerSdust,68 se evaSnp4,1165 evaSnp5,1165 search evaSnp4,202 evaSnp5,202 transMapEnsemblV5,798 transMapEstV5,767 transMapRefSeqV5,767 transMapRnaV5,767 transMapV5,873 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 evaSnp4,175 evaSnp5,175 searls genscan,191 second xenoMrna,91 secondary unipStruct,5 uniprot,361 secreted uniprot,247 section ensGene,53 evaSnp4,444 evaSnp5,444 genscan,153 nestedRepeats,67 refSeqComposite,91 refSeqComposite,1650 rmsk,103 uniprot,897 sections chainHg19,803 chainNetHg19,806 netHg19,803 see augustusGene,42 ensGene,25 ensGene,161 genscan,57 intronEst,122 microsat,101 nestedRepeats,296 nestedRepeats,370 refGene,77 refGene,247 refSeqComposite,88 refSeqComposite,136 refSeqComposite,336 refSeqComposite,541 rmsk,319 rmsk,393 simpleRepeat,63 transMapEnsemblV5,229 transMapEnsemblV5,571 transMapEstV5,198 transMapEstV5,540 transMapRefSeqV5,198 transMapRefSeqV5,540 transMapRnaV5,198 transMapRnaV5,540 transMapV5,304 transMapV5,646 uniprot,188 uniprot,526 uniprot,768 uniprot,894 xenoRefGene,207 seen evaSnp4,440 evaSnp5,440 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select genscan,90 refGene,200 refSeqComposite,510 refSeqComposite,527 refSeqComposite,531 refSeqComposite,544 refSeqComposite,834 xenoRefGene,160 selected est,293 est,309 est,362 intronEst,374 intronEst,390 intronEst,443 mrna,239 mrna,255 mrna,308 refSeqComposite,159 transMapEnsemblV5,212 transMapEnsemblV5,249 transMapEnsemblV5,260 transMapEnsemblV5,328 transMapEstV5,181 transMapEstV5,218 transMapEstV5,229 transMapEstV5,297 transMapRefSeqV5,181 transMapRefSeqV5,218 transMapRefSeqV5,229 transMapRefSeqV5,297 transMapRnaV5,181 transMapRnaV5,218 transMapRnaV5,229 transMapRnaV5,297 transMapV5,287 transMapV5,324 transMapV5,335 transMapV5,403 uniprot,986 xenoMrna,314 xenoMrna,330 xenoMrna,383 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sensitivity transMapV5,147 sep chainHg19,1071 chainNetHg19,1074 nestedRepeats,356 netHg19,1071 rmsk,379 separated est,264 evaSnp4,362 evaSnp5,362 intronEst,345 mrna,210 xenoMrna,285 seq unipConflict,1 sequence augustusGene,32 augustusGene,70 chainHg19,166 chainHg19,292 chainHg19,1031 chainNetHg19,169 chainNetHg19,295 chainNetHg19,1034 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 est,18 est,89 est,398 est,407 est,581 est,718 est,730 est,737 evaSnp4,98 evaSnp4,281 evaSnp4,469 evaSnp4,482 evaSnp4,652 evaSnp4,665 evaSnp4,803 evaSnp4,877 evaSnp4,917 evaSnp4,928 evaSnp5,98 evaSnp5,281 evaSnp5,469 evaSnp5,482 evaSnp5,652 evaSnp5,665 evaSnp5,803 evaSnp5,877 evaSnp5,917 evaSnp5,928 gap,54 gold,53 gold,157 intronEst,20 intronEst,73 intronEst,170 intronEst,479 intronEst,488 intronEst,662 intronEst,799 intronEst,814 intronEst,821 mrna,344 mrna,434 mrna,447 mrna,454 netHg19,166 netHg19,292 netHg19,1031 refGene,314 refGene,326 refGene,408 refGene,413 refSeqComposite,651 refSeqComposite,662 refSeqComposite,878 refSeqComposite,978 refSeqComposite,1006 refSeqComposite,1033 refSeqComposite,1045 refSeqComposite,1078 refSeqComposite,1082 refSeqComposite,1087 refSeqComposite,1282 refSeqComposite,1795 refSeqComposite,1800 rmsk,48 rmsk,62 transMapEnsemblV5,128 transMapEnsemblV5,687 transMapEnsemblV5,694 transMapEstV5,97 transMapEstV5,656 transMapEstV5,663 transMapRefSeqV5,97 transMapRefSeqV5,656 transMapRefSeqV5,663 transMapRnaV5,97 transMapRnaV5,656 transMapRnaV5,663 transMapV5,203 transMapV5,762 transMapV5,769 ucscToRefSeq,24 unipConflict,4 uniprot,356 uniprot,372 uniprot,381 uniprot,387 uniprot,636 uniprot,967 uniprot,971 uniprot,1134 uniprot,1219 uniprot,1242 uniprot,1379 uniprot,2035 windowmaskerSdust,17 xenoMrna,77 xenoMrna,101 xenoMrna,109 xenoMrna,419 xenoMrna,509 xenoMrna,522 xenoMrna,529 xenoRefGene,274 xenoRefGene,286 xenoRefGene,367 xenoRefGene,372 sequence-to-gene refSeqComposite,680 sequenced windowmaskerSdust,104 sequences est,29 est,600 est,608 gold,13 intronEst,41 intronEst,681 intronEst,689 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 refGene,33 refGene,52 refGene,386 refSeqComposite,30 refSeqComposite,111 refSeqComposite,269 refSeqComposite,285 refSeqComposite,883 refSeqComposite,1093 refSeqComposite,1656 refSeqComposite,1773 rmsk,24 rmsk,32 simpleRepeat,84 uniprot,16 uniprot,85 uniprot,112 uniprot,114 uniprot,131 uniprot,138 uniprot,166 uniprot,195 uniprot,197 uniprot,377 uniprot,673 uniprot,781 uniprot,1103 uniprot,1374 uniprot,1424 uniprot,1608 uniprot,1611 uniprot,1889 xenoMrna,114 xenoRefGene,30 xenoRefGene,345 sequencing animalQtl,11 chainHg19,885 chainNetHg19,888 cytoBandIdeo,9 gap,6 gc5BaseBw,10 gold,7 netHg19,885 ucscToRefSeq,7 server ensGene,144 evaSnp4,1047 evaSnp5,1047 refSeqComposite,1324 refSeqComposite,1330 refSeqComposite,1346 refSeqComposite,1485 refSeqComposite,1600 refSeqComposite,1627 refSeqComposite,1679 refSeqComposite,1705 transMapEnsemblV5,558 transMapEstV5,527 transMapRefSeqV5,527 transMapRnaV5,527 transMapV5,633 uniprot,1699 uniprot,1745 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 ensGene,116 set evaSnp4,141 evaSnp5,141 refSeqComposite,160 refSeqComposite,1495 refSeqComposite,1632 refSeqComposite,1695 transMapEnsemblV5,279 transMapEstV5,248 transMapRefSeqV5,248 transMapRnaV5,248 transMapV5,354 uniprot,838 uniprot,858 uniprot,1287 uniprot,1597 sets augustusGene,158 refSeqComposite,154 setting refSeqComposite,1037 refSeqComposite,1064 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 refSeqComposite,742 several est,423 intronEst,504 mrna,362 transMapEnsemblV5,137 transMapEstV5,106 transMapRefSeqV5,106 transMapRnaV5,106 transMapV5,212 xenoMrna,437 shade nestedRepeats,194 shaded est,67 mrna,48 nestedRepeats,182 xenoMrna,53 shades nestedRepeats,202 shading intronEst,146 nestedRepeats,240 refGene,97 refSeqComposite,604 rmsk,208 rmsk,239 xenoRefGene,57 sheep animalQtl,1 animalQtl,3 animalQtl,100 chainHg19,72 chainHg19,98 chainHg19,155 chainHg19,201 chainHg19,267 chainHg19,274 chainHg19,573 chainHg19,625 chainNetHg19,75 chainNetHg19,101 chainNetHg19,158 chainNetHg19,204 chainNetHg19,270 chainNetHg19,277 chainNetHg19,576 chainNetHg19,628 est,1 est,3 est,16 est,643 evaSnp4,42 evaSnp5,42 gap,17 gold,19 intronEst,3 intronEst,18 intronEst,124 intronEst,724 mrna,1 mrna,3 mrna,17 mrna,385 netHg19,72 netHg19,98 netHg19,155 netHg19,201 netHg19,267 netHg19,274 netHg19,573 netHg19,625 refGene,22 refGene,262 refSeqComposite,19 refSeqComposite,441 refSeqComposite,462 refSeqComposite,495 refSeqComposite,1230 transMapEnsemblV5,90 transMapEnsemblV5,202 transMapEnsemblV5,332 transMapEstV5,59 transMapEstV5,171 transMapEstV5,301 transMapRefSeqV5,59 transMapRefSeqV5,171 transMapRefSeqV5,301 transMapRnaV5,59 transMapRnaV5,171 transMapRnaV5,301 transMapV5,60 transMapV5,277 transMapV5,407 xenoMrna,28 xenoMrna,465 xenoRefGene,23 xenoRefGene,222 shen evaSnp4,1172 evaSnp5,1172 shift refSeqComposite,958 shifted refSeqComposite,967 refSeqComposite,1014 short evaSnp4,5 evaSnp5,5 refSeqComposite,925 rmsk,153 uniprot,460 uniprot,978 shortgap refSeqComposite,961 shotgun gold,151 should est,329 est,633 intronEst,410 intronEst,714 mrna,275 xenoMrna,350 show evaSnp4,273 evaSnp5,273 intronEst,29 intronEst,62 refGene,163 refSeqComposite,156 refSeqComposite,787 refSeqComposite,902 refSeqComposite,916 uniprot,80 uniprot,227 uniprot,538 xenoRefGene,123 showing refSeqComposite,956 shown chainHg19,41 chainHg19,54 chainNetHg19,44 chainNetHg19,57 est,147 evaSnp4,63 evaSnp4,344 evaSnp4,358 evaSnp5,63 evaSnp5,344 evaSnp5,358 gold,101 intronEst,228 microsat,48 mrna,93 netHg19,41 netHg19,54 uniprot,504 uniprot,628 uniprot,646 uniprot,1580 uniprot,1631 xenoMrna,168 shows augustusGene,15 augustusGene,108 chainHg19,15 chainHg19,62 chainHg19,263 chainNetHg19,18 chainNetHg19,65 chainNetHg19,266 est,13 evaSnp4,305 evaSnp5,305 gap,10 gc5BaseBw,16 genscan,13 gold,11 intronEst,15 mrna,14 nestedRepeats,17 nestedRepeats,81 netHg19,15 netHg19,62 netHg19,263 refGene,20 refSeqComposite,18 refSeqComposite,1000 refSeqComposite,1011 uniprot,14 uniprot,484 xenoRefGene,13 side est,596 gap,87 intronEst,677 siepel transMapEnsemblV5,711 transMapEstV5,680 transMapRefSeqV5,680 transMapRnaV5,680 transMapV5,786 signal augustusGene,48 augustusGene,63 unipLocSignal,1 unipLocSignal,4 uniprot,238 uniprot,476 uniprot,511 uniprot,564 signals genscan,34 genscan,187 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 signify evaSnp4,660 evaSnp5,660 signs intronEst,30 silva evaSnp4,1174 evaSnp5,1174 similar evaSnp4,601 evaSnp5,601 nestedRepeats,199 uniprot,1403 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainHg19,99 chainNetHg19,102 netHg19,99 since chainHg19,570 chainNetHg19,573 netHg19,570 uniprot,1383 sine rmsk,157 single chainHg19,126 chainHg19,135 chainHg19,619 chainHg19,624 chainNetHg19,129 chainNetHg19,138 chainNetHg19,622 chainNetHg19,627 est,630 est,682 evaSnp4,23 evaSnp4,65 evaSnp4,104 evaSnp4,111 evaSnp4,121 evaSnp4,488 evaSnp5,23 evaSnp5,65 evaSnp5,104 evaSnp5,111 evaSnp5,121 evaSnp5,488 intronEst,711 intronEst,763 mrna,398 nestedRepeats,178 netHg19,126 netHg19,135 netHg19,619 netHg19,624 refGene,278 refSeqComposite,530 refSeqComposite,1246 transMapEnsemblV5,477 transMapEstV5,446 transMapRefSeqV5,446 transMapRnaV5,446 transMapV5,552 uniprot,141 xenoMrna,472 xenoRefGene,238 single-lined chainHg19,206 chainNetHg19,209 netHg19,206 single-read est,28 intronEst,40 site evaSnp4,453 evaSnp4,762 evaSnp5,453 evaSnp5,762 genscan,157 windowmaskerSdust,45 sites augustusGene,54 augustusGene,59 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 refSeqComposite,271 uniprot,342 uniprot,354 uniprot,578 uniprot,585 size evaSnp4,161 evaSnp5,161 gap,134 skepticism est,638 intronEst,719 skip refSeqComposite,1030 skipped refSeqComposite,1043 sm refGene,363 refSeqComposite,1750 xenoRefGene,322 small evaSnp4,27 evaSnp5,27 refSeqComposite,933 smallsize chainHg19,703 chainNetHg19,706 netHg19,703 smit chainHg19,940 chainHg19,1084 chainNetHg19,943 chainNetHg19,1087 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netHg19,940 netHg19,1084 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 snp evaSnp4,2 evaSnp4,86 evaSnp5,2 evaSnp5,86 snps evaSnp4,963 evaSnp4,973 evaSnp5,963 evaSnp5,973 snrna rmsk,192 so chainHg19,434 chainNetHg19,437 evaSnp4,283 evaSnp4,471 evaSnp4,806 evaSnp5,283 evaSnp5,471 evaSnp5,806 netHg19,434 refSeqComposite,301 refSeqComposite,1611 uniprot,1135 uniprot,1430 society refSeqComposite,1075 soft-masked rmsk,305 software nestedRepeats,255 refSeqComposite,376 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 est,155 est,552 est,568 est,670 evaSnp4,880 evaSnp5,880 intronEst,236 intronEst,633 intronEst,649 intronEst,751 mrna,101 nestedRepeats,207 refSeqComposite,656 refSeqComposite,704 rmsk,105 rmsk,268 transMapEnsemblV5,297 transMapEnsemblV5,307 transMapEstV5,266 transMapEstV5,276 transMapRefSeqV5,266 transMapRefSeqV5,276 transMapRnaV5,266 transMapRnaV5,276 transMapV5,372 transMapV5,382 uniprot,318 xenoMrna,176 sometimes simpleRepeat,50 uniprot,983 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainHg19,772 chainNetHg19,775 netHg19,772 uniprot,556 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 evaSnp4,242 evaSnp4,1076 evaSnp4,1090 evaSnp5,242 evaSnp5,1076 evaSnp5,1090 refSeqComposite,1512 transMapEnsemblV5,152 transMapEnsemblV5,323 transMapEnsemblV5,340 transMapEnsemblV5,404 transMapEnsemblV5,429 transMapEnsemblV5,620 transMapEnsemblV5,634 transMapEstV5,121 transMapEstV5,292 transMapEstV5,309 transMapEstV5,373 transMapEstV5,398 transMapEstV5,589 transMapEstV5,603 transMapRefSeqV5,121 transMapRefSeqV5,292 transMapRefSeqV5,309 transMapRefSeqV5,373 transMapRefSeqV5,398 transMapRefSeqV5,589 transMapRefSeqV5,603 transMapRnaV5,121 transMapRnaV5,292 transMapRnaV5,309 transMapRnaV5,373 transMapRnaV5,398 transMapRnaV5,589 transMapRnaV5,603 transMapV5,227 transMapV5,398 transMapV5,415 transMapV5,479 transMapV5,504 transMapV5,695 transMapV5,709 uniprot,820 uniprot,1545 uniprot,1774 uniprot,1788 windowmaskerSdust,33 sources transMapEnsemblV5,48 transMapEnsemblV5,66 space est,267 intronEst,348 mrna,213 uniprot,1990 xenoMrna,288 spaces evaSnp4,364 evaSnp5,364 gold,99 span chainHg19,393 chainNetHg19,396 netHg19,393 refSeqComposite,1002 spans evaSnp4,133 evaSnp5,133 specialized simpleRepeat,29 species animalQtl,55 augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainHg19,116 chainHg19,169 chainHg19,188 chainHg19,891 chainNetHg19,119 chainNetHg19,172 chainNetHg19,191 chainNetHg19,894 evaSnp4,1194 evaSnp5,1194 netHg19,116 netHg19,169 netHg19,188 netHg19,891 transMapEnsemblV5,32 transMapEnsemblV5,269 transMapEstV5,30 transMapEstV5,238 transMapRefSeqV5,30 transMapRefSeqV5,238 transMapRnaV5,30 transMapRnaV5,238 transMapV5,29 transMapV5,78 transMapV5,114 transMapV5,344 species-specific augustusGene,156 specific est,194 evaSnp4,436 evaSnp5,436 gap,33 gold,35 intronEst,275 mrna,140 simpleRepeat,53 xenoMrna,215 specification gap,59 gold,58 specify refSeqComposite,1110 speed refSeqComposite,1438 speir evaSnp4,1218 evaSnp5,1218 splice augustusGene,53 evaSnp4,452 evaSnp4,761 evaSnp5,452 evaSnp5,761 genscan,156 refSeqComposite,270 uniprot,144 splice_acceptor_variant evaSnp4,770 evaSnp5,770 splice_donor_variant evaSnp4,771 evaSnp5,771 splice_region_variant evaSnp4,772 evaSnp5,772 spliced intronEst,1 intronEst,8 intronEst,58 transMapEnsemblV5,175 transMapEstV5,17 transMapEstV5,144 transMapRefSeqV5,144 transMapRnaV5,144 transMapV5,250 splicing augustusGene,123 genscan,33 genscan,186 intronEst,32 intronEst,93 split chainHg19,574 chainNetHg19,577 netHg19,574 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srcuniq transMapEnsemblV5,421 transMapEstV5,390 transMapRefSeqV5,390 transMapRnaV5,390 transMapV5,496 srprna rmsk,194 staff refSeqComposite,639 refSeqComposite,690 uniprot,42 uniprot,1965 stage uniprot,1228 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 transMapEnsemblV5,754 transMapEstV5,723 transMapRefSeqV5,723 transMapRnaV5,723 transMapV5,829 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 est,560 evaSnp4,1122 evaSnp5,1122 intronEst,641 refSeqComposite,1554 transMapEnsemblV5,668 transMapEstV5,637 transMapRefSeqV5,637 transMapRnaV5,637 transMapV5,743 uniprot,125 uniprot,209 uniprot,1821 state animalQtl,200 animalQtl,246 animalQtl,285 chainHg19,917 chainHg19,1020 chainNetHg19,920 chainNetHg19,1023 netHg19,917 netHg19,1020 statistical augustusGene,47 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 evaSnp4,1126 evaSnp5,1126 refSeqComposite,1558 transMapEnsemblV5,672 transMapEstV5,641 transMapRefSeqV5,641 transMapRnaV5,641 transMapV5,747 uniprot,1825 stefanie augustusGene,267 step transMapEnsemblV5,305 transMapEstV5,274 transMapRefSeqV5,274 transMapRnaV5,274 transMapV5,380 uniprot,901 uniprot,1155 uniprot,1330 stevens transMapEnsemblV5,720 transMapEstV5,689 transMapRefSeqV5,689 transMapRnaV5,689 transMapV5,795 stop_gained evaSnp4,773 evaSnp5,773 stop_lost evaSnp4,774 evaSnp5,774 stop_retained_variant evaSnp4,781 evaSnp5,781 storage chainHg19,974 chainNetHg19,977 netHg19,974 stored evaSnp4,1035 evaSnp5,1035 refSeqComposite,1474 transMapEnsemblV5,541 transMapEstV5,510 transMapRefSeqV5,510 transMapRnaV5,510 transMapV5,616 uniprot,1733 strand chainHg19,246 chainNetHg19,249 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 est,74 intronEst,155 nestedRepeats,144 nestedRepeats,155 netHg19,246 xenoMrna,60 strands uniprot,365 strategy uniprot,1120 uniprot,1193 streamlining animalQtl,220 stringency transMapV5,119 structural animalQtl,423 structure augustusGene,113 unipStruct,1 unipStruct,6 uniprot,362 uniprot,2037 structures augustusGene,164 genscan,215 studying chainHg19,287 chainNetHg19,290 netHg19,287 subcellular uniprot,553 subject refSeqComposite,674 refSeqComposite,699 submit refGene,58 refSeqComposite,117 submitted est,732 intronEst,816 mrna,449 transMapEnsemblV5,689 transMapEstV5,658 transMapRefSeqV5,658 transMapRnaV5,658 transMapV5,764 xenoMrna,524 submodel augustusGene,331 subsections chainHg19,638 chainNetHg19,641 netHg19,638 subsequent transMapEnsemblV5,439 transMapEstV5,408 transMapRefSeqV5,408 transMapRnaV5,408 transMapV5,514 subset est,133 intronEst,214 microsat,54 mrna,79 ncbiRefSeqCurated,7 ncbiRefSeqPredicted,7 refSeqComposite,211 refSeqComposite,341 refSeqComposite,511 refSeqComposite,516 refSeqComposite,547 refSeqComposite,549 refSeqComposite,579 refSeqComposite,791 transMapEnsemblV5,206 transMapEstV5,175 transMapRefSeqV5,175 transMapRnaV5,175 transMapV5,281 xenoMrna,154 subsets evaSnp4,274 evaSnp5,274 substantial chainHg19,165 chainNetHg19,168 netHg19,165 substituted evaSnp4,639 evaSnp5,639 substitution evaSnp4,485 evaSnp5,485 substitutions evaSnp4,852 evaSnp5,852 subtrack refSeqComposite,746 refSeqComposite,758 uniprot,411 subtracks chainHg19,29 chainHg19,36 chainNetHg19,32 chainNetHg19,39 netHg19,29 netHg19,36 refSeqComposite,34 refSeqComposite,162 refSeqComposite,186 refSeqComposite,1394 uniprot,59 uniprot,72 uniprot,520 uniprot,548 subtracts refSeqComposite,178 successful est,590 intronEst,671 such animalQtl,74 chainHg19,852 chainNetHg19,855 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netHg19,852 refSeqComposite,412 uniprot,306 suffix transMapEnsemblV5,398 transMapEstV5,367 transMapRefSeqV5,367 transMapRnaV5,367 transMapV5,473 uniprot,1255 suggestions refGene,57 refSeqComposite,116 suitable uniprot,1868 suppl augustusGene,336 supported animalQtl,267 gap,92 sure refSeqComposite,1096 uniprot,1407 svetlana animalQtl,208 swiss-prot uniprot,2025 swissprot unipAliSwissprot,1 unipAliSwissprot,6 uniprot,3 uniprot,24 uniprot,31 uniprot,76 uniprot,109 uniprot,116 uniprot,127 uniprot,414 uniprot,454 uniprot,495 uniprot,623 uniprot,703 uniprot,1373 switched evaSnp4,170 evaSnp5,170 symp chainHg19,1034 chainNetHg19,1037 netHg19,1034 syn chainHg19,517 chainNetHg19,520 netHg19,517 transMapEnsemblV5,253 transMapEstV5,222 transMapRefSeqV5,222 transMapRnaV5,222 transMapV5,328 synonymous evaSnp4,455 evaSnp4,777 evaSnp5,455 evaSnp5,777 synonymous_variant evaSnp4,780 evaSnp5,780 syntenic chainHg19,281 chainHg19,859 chainNetHg19,284 chainNetHg19,862 netHg19,281 netHg19,859 transMapEnsemblV5,235 transMapEnsemblV5,514 transMapEstV5,204 transMapEstV5,483 transMapRefSeqV5,204 transMapRefSeqV5,483 transMapRnaV5,204 transMapRnaV5,483 transMapV5,310 transMapV5,589 syntenically augustusGene,297 transMapEnsemblV5,76 transMapEnsemblV5,765 transMapEstV5,45 transMapEstV5,734 transMapRefSeqV5,45 transMapRefSeqV5,734 transMapRnaV5,45 transMapRnaV5,734 transMapV5,44 transMapV5,840 synteny chainHg19,32 chainNetHg19,35 netHg19,32 transMapEnsemblV5,274 transMapEstV5,243 transMapRefSeqV5,243 transMapRnaV5,243 transMapV5,349 synteny-filtered transMapV5,82 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainHg19,78 chainNetHg19,81 evaSnp4,1086 evaSnp5,1086 netHg19,78 refSeqComposite,1463 refSeqComposite,1522 transMapEnsemblV5,630 transMapEstV5,599 transMapRefSeqV5,599 transMapRnaV5,599 transMapV5,705 uniprot,1353 uniprot,1784 systems chainHg19,88 chainNetHg19,91 netHg19,88 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 ensGene,169 ensGene,181 ensGene,187 evaSnp4,589 evaSnp4,1161 evaSnp5,589 evaSnp5,1161 refGene,403 refSeqComposite,1790 xenoRefGene,362 t-123-31-11491 chainHg19,671 chainNetHg19,674 netHg19,671 table augustusGene,225 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 ensGene,66 est,219 est,222 est,241 evaSnp4,992 evaSnp5,992 intronEst,300 intronEst,303 intronEst,322 mrna,165 mrna,168 mrna,187 refSeqComposite,1176 refSeqComposite,1308 refSeqComposite,1353 refSeqComposite,1570 transMapEnsemblV5,529 transMapEstV5,498 transMapRefSeqV5,498 transMapRnaV5,498 transMapV5,604 uniprot,1720 windowmaskerSdust,85 xenoMrna,240 xenoMrna,243 xenoMrna,262 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 refSeqComposite,81 refSeqComposite,1314 refSeqComposite,1399 refSeqComposite,1428 uniprot,1301 tablesize chainHg19,701 chainNetHg19,704 netHg19,701 tags est,19 intronEst,21 tail est,501 intronEst,582 taken est,472 intronEst,553 refGene,27 refSeqComposite,24 xenoRefGene,24 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 transMapEnsemblV5,506 transMapEstV5,475 transMapRefSeqV5,475 transMapRnaV5,475 transMapV5,581 tandemrepeat evaSnp4,603 evaSnp5,603 targeted transMapEnsemblV5,734 transMapEstV5,703 transMapRefSeqV5,703 transMapRnaV5,703 transMapV5,809 targeting refSeqComposite,580 task animalQtl,206 est,161 intronEst,242 mrna,107 xenoMrna,182 tatusova refGene,402 refSeqComposite,1789 xenoRefGene,361 tblastn uniprot,1476 team animalQtl,278 techniques est,566 intronEst,647 temperature augustusGene,141 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 term est,168 evaSnp4,284 evaSnp4,657 evaSnp5,284 evaSnp5,657 intronEst,249 mrna,114 xenoMrna,189 terminal rmsk,167 terminology refSeqComposite,1071 terms est,212 est,258 evaSnp4,334 evaSnp4,355 evaSnp4,484 evaSnp4,808 evaSnp5,334 evaSnp5,355 evaSnp5,484 evaSnp5,808 intronEst,293 intronEst,339 mrna,158 mrna,204 xenoMrna,233 xenoMrna,279 text est,175 est,215 est,255 intronEst,256 intronEst,296 intronEst,336 mrna,121 mrna,161 mrna,201 uniprot,1763 xenoMrna,196 xenoMrna,236 xenoMrna,276 tgap chainHg19,729 chainNetHg19,732 netHg19,729 th transMapEnsemblV5,793 transMapEstV5,762 transMapRefSeqV5,762 transMapRnaV5,762 transMapV5,868 than chainHg19,83 chainHg19,506 chainNetHg19,86 chainNetHg19,509 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 est,280 est,573 evaSnp4,152 evaSnp4,164 evaSnp4,622 evaSnp4,635 evaSnp5,152 evaSnp5,164 evaSnp5,622 evaSnp5,635 intronEst,361 intronEst,654 mrna,226 nestedRepeats,213 nestedRepeats,271 netHg19,83 netHg19,506 refGene,272 refSeqComposite,1240 transMapEnsemblV5,223 transMapEnsemblV5,373 transMapEstV5,192 transMapEstV5,342 transMapRefSeqV5,192 transMapRefSeqV5,342 transMapRnaV5,192 transMapRnaV5,342 transMapV5,107 transMapV5,148 transMapV5,298 transMapV5,448 xenoMrna,27 xenoMrna,301 xenoRefGene,22 xenoRefGene,232 thank ensGene,150 thanks augustusGene,248 genscan,170 nestedRepeats,303 rmsk,326 uniprot,1974 that chainHg19,20 chainHg19,45 chainHg19,79 chainHg19,139 chainHg19,163 chainHg19,365 chainHg19,392 chainHg19,414 chainHg19,566 chainHg19,822 chainHg19,833 chainNetHg19,23 chainNetHg19,48 chainNetHg19,82 chainNetHg19,142 chainNetHg19,166 chainNetHg19,368 chainNetHg19,395 chainNetHg19,417 chainNetHg19,569 chainNetHg19,825 chainNetHg19,836 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 est,36 est,63 est,117 est,224 est,248 est,296 est,311 est,328 est,352 est,370 est,387 est,402 est,655 est,676 evaSnp4,132 evaSnp4,222 evaSnp4,533 evaSnp4,583 evaSnp4,605 evaSnp4,618 evaSnp4,671 evaSnp4,1040 evaSnp5,132 evaSnp5,222 evaSnp5,533 evaSnp5,583 evaSnp5,605 evaSnp5,618 evaSnp5,671 evaSnp5,1040 genscan,141 gold,71 gold,144 intronEst,5 intronEst,28 intronEst,48 intronEst,198 intronEst,305 intronEst,329 intronEst,377 intronEst,392 intronEst,409 intronEst,433 intronEst,451 intronEst,468 intronEst,483 intronEst,736 intronEst,757 microsat,15 mrna,44 mrna,63 mrna,170 mrna,194 mrna,242 mrna,257 mrna,274 mrna,298 mrna,316 mrna,333 nestedRepeats,265 nestedRepeats,273 netHg19,20 netHg19,45 netHg19,79 netHg19,139 netHg19,163 netHg19,365 netHg19,392 netHg19,414 netHg19,566 netHg19,822 netHg19,833 refGene,186 refSeqComposite,150 refSeqComposite,170 refSeqComposite,215 refSeqComposite,345 refSeqComposite,388 refSeqComposite,820 refSeqComposite,930 refSeqComposite,1021 refSeqComposite,1029 refSeqComposite,1054 refSeqComposite,1097 refSeqComposite,1617 rmsk,42 rmsk,259 transMapEnsemblV5,117 transMapEnsemblV5,193 transMapEnsemblV5,497 transMapEstV5,86 transMapEstV5,162 transMapEstV5,466 transMapRefSeqV5,86 transMapRefSeqV5,162 transMapRefSeqV5,466 transMapRnaV5,86 transMapRnaV5,162 transMapRnaV5,466 transMapV5,192 transMapV5,268 transMapV5,572 uniprot,167 uniprot,301 uniprot,696 uniprot,734 uniprot,745 uniprot,999 uniprot,1012 uniprot,1169 uniprot,1408 uniprot,1602 uniprot,1624 uniprot,1738 uniprot,1866 xenoMrna,49 xenoMrna,138 xenoMrna,245 xenoMrna,269 xenoMrna,317 xenoMrna,332 xenoMrna,349 xenoMrna,373 xenoMrna,391 xenoMrna,408 xenoRefGene,146 the animalQtl,13 animalQtl,78 animalQtl,85 animalQtl,109 animalQtl,115 animalQtl,132 animalQtl,137 animalQtl,141 animalQtl,143 animalQtl,160 animalQtl,170 animalQtl,180 animalQtl,203 animalQtl,222 animalQtl,251 animalQtl,256 animalQtl,262 animalQtl,269 animalQtl,274 animalQtl,349 animalQtl,386 augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 chainHg19,18 chainHg19,37 chainHg19,59 chainHg19,71 chainHg19,117 chainHg19,130 chainHg19,147 chainHg19,154 chainHg19,200 chainHg19,203 chainHg19,229 chainHg19,239 chainHg19,244 chainHg19,252 chainHg19,260 chainHg19,264 chainHg19,273 chainHg19,290 chainHg19,299 chainHg19,313 chainHg19,328 chainHg19,334 chainHg19,337 chainHg19,352 chainHg19,358 chainHg19,362 chainHg19,382 chainHg19,388 chainHg19,402 chainHg19,420 chainHg19,437 chainHg19,440 chainHg19,445 chainHg19,458 chainHg19,471 chainHg19,473 chainHg19,480 chainHg19,483 chainHg19,490 chainHg19,496 chainHg19,509 chainHg19,520 chainHg19,524 chainHg19,527 chainHg19,535 chainHg19,539 chainHg19,545 chainHg19,556 chainHg19,559 chainHg19,571 chainHg19,578 chainHg19,580 chainHg19,588 chainHg19,594 chainHg19,603 chainHg19,606 chainHg19,636 chainHg19,641 chainHg19,650 chainHg19,654 chainHg19,661 chainHg19,684 chainHg19,692 chainHg19,762 chainHg19,766 chainHg19,774 chainHg19,778 chainHg19,782 chainHg19,790 chainHg19,835 chainHg19,845 chainHg19,864 chainHg19,867 chainHg19,879 chainHg19,903 chainHg19,945 chainHg19,951 chainHg19,969 chainHg19,976 chainHg19,988 chainHg19,997 chainHg19,1018 chainHg19,1058 chainNetHg19,21 chainNetHg19,40 chainNetHg19,62 chainNetHg19,74 chainNetHg19,120 chainNetHg19,133 chainNetHg19,150 chainNetHg19,157 chainNetHg19,203 chainNetHg19,206 chainNetHg19,232 chainNetHg19,242 chainNetHg19,247 chainNetHg19,255 chainNetHg19,263 chainNetHg19,267 chainNetHg19,276 chainNetHg19,293 chainNetHg19,302 chainNetHg19,316 chainNetHg19,331 chainNetHg19,337 chainNetHg19,340 chainNetHg19,355 chainNetHg19,361 chainNetHg19,365 chainNetHg19,385 chainNetHg19,391 chainNetHg19,405 chainNetHg19,423 chainNetHg19,440 chainNetHg19,443 chainNetHg19,448 chainNetHg19,461 chainNetHg19,474 chainNetHg19,476 chainNetHg19,483 chainNetHg19,486 chainNetHg19,493 chainNetHg19,499 chainNetHg19,512 chainNetHg19,523 chainNetHg19,527 chainNetHg19,530 chainNetHg19,538 chainNetHg19,542 chainNetHg19,548 chainNetHg19,559 chainNetHg19,562 chainNetHg19,574 chainNetHg19,581 chainNetHg19,583 chainNetHg19,591 chainNetHg19,597 chainNetHg19,606 chainNetHg19,609 chainNetHg19,639 chainNetHg19,644 chainNetHg19,653 chainNetHg19,657 chainNetHg19,664 chainNetHg19,687 chainNetHg19,695 chainNetHg19,765 chainNetHg19,769 chainNetHg19,777 chainNetHg19,781 chainNetHg19,785 chainNetHg19,793 chainNetHg19,838 chainNetHg19,848 chainNetHg19,867 chainNetHg19,870 chainNetHg19,882 chainNetHg19,906 chainNetHg19,948 chainNetHg19,954 chainNetHg19,972 chainNetHg19,979 chainNetHg19,991 chainNetHg19,1000 chainNetHg19,1021 chainNetHg19,1061 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ensGene,21 ensGene,34 ensGene,51 ensGene,65 ensGene,69 ensGene,75 ensGene,101 ensGene,107 ensGene,190 est,24 est,50 est,61 est,73 est,77 est,80 est,83 est,86 est,95 est,100 est,108 est,123 est,127 est,137 est,149 est,159 est,164 est,174 est,179 est,186 est,197 est,200 est,203 est,208 est,218 est,221 est,227 est,237 est,244 est,253 est,274 est,284 est,316 est,323 est,337 est,346 est,354 est,363 est,372 est,389 est,396 est,405 est,416 est,437 est,460 est,474 est,488 est,499 est,505 est,515 est,519 est,530 est,534 est,541 est,550 est,554 est,564 est,584 est,610 est,616 est,650 est,656 est,688 est,691 est,707 est,716 est,734 est,800 evaSnp4,33 evaSnp4,41 evaSnp4,45 evaSnp4,58 evaSnp4,74 evaSnp4,81 evaSnp4,85 evaSnp4,90 evaSnp4,93 evaSnp4,96 evaSnp4,117 evaSnp4,138 evaSnp4,156 evaSnp4,159 evaSnp4,167 evaSnp4,191 evaSnp4,196 evaSnp4,200 evaSnp4,205 evaSnp4,213 evaSnp4,227 evaSnp4,232 evaSnp4,235 evaSnp4,241 evaSnp4,244 evaSnp4,246 evaSnp4,253 evaSnp4,269 evaSnp4,276 evaSnp4,293 evaSnp4,306 evaSnp4,310 evaSnp4,314 evaSnp4,319 evaSnp4,327 evaSnp4,346 evaSnp4,386 evaSnp4,391 evaSnp4,411 evaSnp4,423 evaSnp4,432 evaSnp4,442 evaSnp4,480 evaSnp4,491 evaSnp4,507 evaSnp4,510 evaSnp4,520 evaSnp4,525 evaSnp4,557 evaSnp4,560 evaSnp4,570 evaSnp4,575 evaSnp4,606 evaSnp4,682 evaSnp4,694 evaSnp4,704 evaSnp4,708 evaSnp4,718 evaSnp4,740 evaSnp4,755 evaSnp4,812 evaSnp4,816 evaSnp4,832 evaSnp4,869 evaSnp4,875 evaSnp4,882 evaSnp4,885 evaSnp4,902 evaSnp4,905 evaSnp4,913 evaSnp4,915 evaSnp4,926 evaSnp4,940 evaSnp4,946 evaSnp4,980 evaSnp4,984 evaSnp4,991 evaSnp4,995 evaSnp4,1001 evaSnp4,1048 evaSnp4,1059 evaSnp4,1075 evaSnp4,1098 evaSnp4,1133 evaSnp4,1182 evaSnp5,33 evaSnp5,41 evaSnp5,45 evaSnp5,58 evaSnp5,74 evaSnp5,81 evaSnp5,85 evaSnp5,90 evaSnp5,93 evaSnp5,96 evaSnp5,117 evaSnp5,138 evaSnp5,156 evaSnp5,159 evaSnp5,167 evaSnp5,191 evaSnp5,196 evaSnp5,200 evaSnp5,205 evaSnp5,213 evaSnp5,227 evaSnp5,232 evaSnp5,235 evaSnp5,241 evaSnp5,244 evaSnp5,246 evaSnp5,253 evaSnp5,269 evaSnp5,276 evaSnp5,293 evaSnp5,306 evaSnp5,310 evaSnp5,314 evaSnp5,319 evaSnp5,327 evaSnp5,346 evaSnp5,386 evaSnp5,391 evaSnp5,411 evaSnp5,423 evaSnp5,432 evaSnp5,442 evaSnp5,480 evaSnp5,491 evaSnp5,507 evaSnp5,510 evaSnp5,520 evaSnp5,525 evaSnp5,557 evaSnp5,560 evaSnp5,570 evaSnp5,575 evaSnp5,606 evaSnp5,682 evaSnp5,694 evaSnp5,704 evaSnp5,708 evaSnp5,718 evaSnp5,740 evaSnp5,755 evaSnp5,812 evaSnp5,816 evaSnp5,832 evaSnp5,869 evaSnp5,875 evaSnp5,882 evaSnp5,885 evaSnp5,902 evaSnp5,905 evaSnp5,913 evaSnp5,915 evaSnp5,926 evaSnp5,940 evaSnp5,946 evaSnp5,980 evaSnp5,984 evaSnp5,991 evaSnp5,995 evaSnp5,1001 evaSnp5,1048 evaSnp5,1059 evaSnp5,1075 evaSnp5,1098 evaSnp5,1133 evaSnp5,1182 gap,11 gap,14 gap,26 gap,38 gap,41 gap,48 gap,53 gap,55 gap,61 gap,64 gap,77 gap,83 gap,89 gap,109 gap,113 gap,118 gc5BaseBw,12 gc5BaseBw,17 gc5BaseBw,53 gc5BaseBw,57 gc5BaseBw,68 gc5BaseBw,72 genscan,16 genscan,23 genscan,38 genscan,53 genscan,68 genscan,75 genscan,80 genscan,91 genscan,115 genscan,135 genscan,139 genscan,151 genscan,155 genscan,176 gold,12 gold,16 gold,28 gold,40 gold,47 gold,52 gold,54 gold,60 gold,63 gold,69 gold,74 gold,86 gold,103 gold,108 gold,114 gold,128 gold,133 intronEst,26 intronEst,36 intronEst,71 intronEst,94 intronEst,99 intronEst,106 intronEst,123 intronEst,134 intronEst,154 intronEst,158 intronEst,161 intronEst,164 intronEst,167 intronEst,176 intronEst,181 intronEst,189 intronEst,204 intronEst,208 intronEst,218 intronEst,230 intronEst,240 intronEst,245 intronEst,255 intronEst,260 intronEst,267 intronEst,278 intronEst,281 intronEst,284 intronEst,289 intronEst,299 intronEst,302 intronEst,308 intronEst,318 intronEst,325 intronEst,334 intronEst,355 intronEst,365 intronEst,397 intronEst,404 intronEst,418 intronEst,427 intronEst,435 intronEst,444 intronEst,453 intronEst,470 intronEst,477 intronEst,486 intronEst,497 intronEst,518 intronEst,541 intronEst,555 intronEst,569 intronEst,580 intronEst,586 intronEst,596 intronEst,600 intronEst,611 intronEst,615 intronEst,622 intronEst,631 intronEst,635 intronEst,645 intronEst,665 intronEst,691 intronEst,697 intronEst,731 intronEst,737 intronEst,769 intronEst,772 intronEst,788 intronEst,797 intronEst,818 intronEst,884 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,11 mrna,22 mrna,31 mrna,42 mrna,54 mrna,69 mrna,73 mrna,83 mrna,95 mrna,105 mrna,110 mrna,120 mrna,125 mrna,132 mrna,143 mrna,146 mrna,149 mrna,154 mrna,164 mrna,167 mrna,173 mrna,183 mrna,190 mrna,199 mrna,220 mrna,230 mrna,262 mrna,269 mrna,283 mrna,292 mrna,300 mrna,309 mrna,318 mrna,335 mrna,342 mrna,353 mrna,376 mrna,390 mrna,393 mrna,404 mrna,407 mrna,423 mrna,432 mrna,438 mrna,451 mrna,517 ncbiRefSeqGenomicDiff,9 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netHg19,18 netHg19,37 netHg19,59 netHg19,71 netHg19,117 netHg19,130 netHg19,147 netHg19,154 netHg19,200 netHg19,203 netHg19,229 netHg19,239 netHg19,244 netHg19,252 netHg19,260 netHg19,264 netHg19,273 netHg19,290 netHg19,299 netHg19,313 netHg19,328 netHg19,334 netHg19,337 netHg19,352 netHg19,358 netHg19,362 netHg19,382 netHg19,388 netHg19,402 netHg19,420 netHg19,437 netHg19,440 netHg19,445 netHg19,458 netHg19,471 netHg19,473 netHg19,480 netHg19,483 netHg19,490 netHg19,496 netHg19,509 netHg19,520 netHg19,524 netHg19,527 netHg19,535 netHg19,539 netHg19,545 netHg19,556 netHg19,559 netHg19,571 netHg19,578 netHg19,580 netHg19,588 netHg19,594 netHg19,603 netHg19,606 netHg19,636 netHg19,641 netHg19,650 netHg19,654 netHg19,661 netHg19,684 netHg19,692 netHg19,762 netHg19,766 netHg19,774 netHg19,778 netHg19,782 netHg19,790 netHg19,835 netHg19,845 netHg19,864 netHg19,867 netHg19,879 netHg19,903 netHg19,945 netHg19,951 netHg19,969 netHg19,976 netHg19,988 netHg19,997 netHg19,1018 netHg19,1058 refGene,16 refGene,29 refGene,36 refGene,46 refGene,73 refGene,88 refGene,95 refGene,99 refGene,103 refGene,114 refGene,129 refGene,132 refGene,135 refGene,149 refGene,155 refGene,160 refGene,165 refGene,173 refGene,201 refGene,206 refGene,221 refGene,236 refGene,249 refGene,261 refGene,284 refGene,287 refGene,303 refGene,312 refGene,335 refGene,343 refSeqComposite,12 refSeqComposite,26 refSeqComposite,42 refSeqComposite,51 refSeqComposite,55 refSeqComposite,65 refSeqComposite,89 refSeqComposite,97 refSeqComposite,132 refSeqComposite,164 refSeqComposite,168 refSeqComposite,184 refSeqComposite,239 refSeqComposite,280 refSeqComposite,283 refSeqComposite,289 refSeqComposite,306 refSeqComposite,312 refSeqComposite,324 refSeqComposite,332 refSeqComposite,368 refSeqComposite,372 refSeqComposite,385 refSeqComposite,392 refSeqComposite,397 refSeqComposite,401 refSeqComposite,440 refSeqComposite,445 refSeqComposite,449 refSeqComposite,461 refSeqComposite,494 refSeqComposite,503 refSeqComposite,525 refSeqComposite,556 refSeqComposite,567 refSeqComposite,575 refSeqComposite,583 refSeqComposite,595 refSeqComposite,602 refSeqComposite,606 refSeqComposite,610 refSeqComposite,631 refSeqComposite,644 refSeqComposite,654 refSeqComposite,667 refSeqComposite,678 refSeqComposite,692 refSeqComposite,707 refSeqComposite,712 refSeqComposite,728 refSeqComposite,732 refSeqComposite,735 refSeqComposite,741 refSeqComposite,748 refSeqComposite,753 refSeqComposite,757 refSeqComposite,770 refSeqComposite,776 refSeqComposite,784 refSeqComposite,796 refSeqComposite,807 refSeqComposite,835 refSeqComposite,840 refSeqComposite,855 refSeqComposite,864 refSeqComposite,875 refSeqComposite,880 refSeqComposite,884 refSeqComposite,903 refSeqComposite,909 refSeqComposite,917 refSeqComposite,923 refSeqComposite,973 refSeqComposite,997 refSeqComposite,1001 refSeqComposite,1004 refSeqComposite,1008 refSeqComposite,1012 refSeqComposite,1047 refSeqComposite,1059 refSeqComposite,1106 refSeqComposite,1111 refSeqComposite,1117 refSeqComposite,1126 refSeqComposite,1140 refSeqComposite,1155 refSeqComposite,1172 refSeqComposite,1181 refSeqComposite,1186 refSeqComposite,1194 refSeqComposite,1208 refSeqComposite,1216 refSeqComposite,1229 refSeqComposite,1252 refSeqComposite,1255 refSeqComposite,1271 refSeqComposite,1280 refSeqComposite,1287 refSeqComposite,1305 refSeqComposite,1313 refSeqComposite,1334 refSeqComposite,1341 refSeqComposite,1362 refSeqComposite,1365 refSeqComposite,1382 refSeqComposite,1392 refSeqComposite,1421 refSeqComposite,1444 refSeqComposite,1460 refSeqComposite,1465 refSeqComposite,1468 refSeqComposite,1493 refSeqComposite,1511 refSeqComposite,1524 refSeqComposite,1542 refSeqComposite,1567 refSeqComposite,1572 refSeqComposite,1576 refSeqComposite,1588 refSeqComposite,1593 refSeqComposite,1597 refSeqComposite,1601 refSeqComposite,1607 refSeqComposite,1639 refSeqComposite,1644 refSeqComposite,1647 refSeqComposite,1654 refSeqComposite,1664 refSeqComposite,1693 refSeqComposite,1722 refSeqComposite,1730 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 transMapEnsemblV5,24 transMapEnsemblV5,34 transMapEnsemblV5,71 transMapEnsemblV5,86 transMapEnsemblV5,98 transMapEnsemblV5,119 transMapEnsemblV5,126 transMapEnsemblV5,161 transMapEnsemblV5,178 transMapEnsemblV5,201 transMapEnsemblV5,208 transMapEnsemblV5,251 transMapEnsemblV5,255 transMapEnsemblV5,259 transMapEnsemblV5,271 transMapEnsemblV5,277 transMapEnsemblV5,294 transMapEnsemblV5,302 transMapEnsemblV5,309 transMapEnsemblV5,311 transMapEnsemblV5,322 transMapEnsemblV5,327 transMapEnsemblV5,331 transMapEnsemblV5,339 transMapEnsemblV5,343 transMapEnsemblV5,345 transMapEnsemblV5,376 transMapEnsemblV5,403 transMapEnsemblV5,413 transMapEnsemblV5,416 transMapEnsemblV5,438 transMapEnsemblV5,447 transMapEnsemblV5,460 transMapEnsemblV5,470 transMapEnsemblV5,482 transMapEnsemblV5,503 transMapEnsemblV5,517 transMapEnsemblV5,528 transMapEnsemblV5,532 transMapEnsemblV5,538 transMapEnsemblV5,577 transMapEnsemblV5,585 transMapEnsemblV5,603 transMapEnsemblV5,619 transMapEnsemblV5,642 transMapEnsemblV5,691 transMapEnsemblV5,703 transMapEnsemblV5,805 transMapEstV5,22 transMapEstV5,32 transMapEstV5,40 transMapEstV5,55 transMapEstV5,67 transMapEstV5,88 transMapEstV5,95 transMapEstV5,130 transMapEstV5,147 transMapEstV5,170 transMapEstV5,177 transMapEstV5,220 transMapEstV5,224 transMapEstV5,228 transMapEstV5,240 transMapEstV5,246 transMapEstV5,263 transMapEstV5,271 transMapEstV5,278 transMapEstV5,280 transMapEstV5,291 transMapEstV5,296 transMapEstV5,300 transMapEstV5,308 transMapEstV5,312 transMapEstV5,314 transMapEstV5,345 transMapEstV5,372 transMapEstV5,382 transMapEstV5,385 transMapEstV5,407 transMapEstV5,416 transMapEstV5,429 transMapEstV5,439 transMapEstV5,451 transMapEstV5,472 transMapEstV5,486 transMapEstV5,497 transMapEstV5,501 transMapEstV5,507 transMapEstV5,546 transMapEstV5,554 transMapEstV5,572 transMapEstV5,588 transMapEstV5,611 transMapEstV5,660 transMapEstV5,672 transMapEstV5,774 transMapRefSeqV5,22 transMapRefSeqV5,32 transMapRefSeqV5,40 transMapRefSeqV5,55 transMapRefSeqV5,67 transMapRefSeqV5,88 transMapRefSeqV5,95 transMapRefSeqV5,130 transMapRefSeqV5,147 transMapRefSeqV5,170 transMapRefSeqV5,177 transMapRefSeqV5,220 transMapRefSeqV5,224 transMapRefSeqV5,228 transMapRefSeqV5,240 transMapRefSeqV5,246 transMapRefSeqV5,263 transMapRefSeqV5,271 transMapRefSeqV5,278 transMapRefSeqV5,280 transMapRefSeqV5,291 transMapRefSeqV5,296 transMapRefSeqV5,300 transMapRefSeqV5,308 transMapRefSeqV5,312 transMapRefSeqV5,314 transMapRefSeqV5,345 transMapRefSeqV5,372 transMapRefSeqV5,382 transMapRefSeqV5,385 transMapRefSeqV5,407 transMapRefSeqV5,416 transMapRefSeqV5,429 transMapRefSeqV5,439 transMapRefSeqV5,451 transMapRefSeqV5,472 transMapRefSeqV5,486 transMapRefSeqV5,497 transMapRefSeqV5,501 transMapRefSeqV5,507 transMapRefSeqV5,546 transMapRefSeqV5,554 transMapRefSeqV5,572 transMapRefSeqV5,588 transMapRefSeqV5,611 transMapRefSeqV5,660 transMapRefSeqV5,672 transMapRefSeqV5,774 transMapRnaV5,22 transMapRnaV5,32 transMapRnaV5,40 transMapRnaV5,55 transMapRnaV5,67 transMapRnaV5,88 transMapRnaV5,95 transMapRnaV5,130 transMapRnaV5,147 transMapRnaV5,170 transMapRnaV5,177 transMapRnaV5,220 transMapRnaV5,224 transMapRnaV5,228 transMapRnaV5,240 transMapRnaV5,246 transMapRnaV5,263 transMapRnaV5,271 transMapRnaV5,278 transMapRnaV5,280 transMapRnaV5,291 transMapRnaV5,296 transMapRnaV5,300 transMapRnaV5,308 transMapRnaV5,312 transMapRnaV5,314 transMapRnaV5,345 transMapRnaV5,372 transMapRnaV5,382 transMapRnaV5,385 transMapRnaV5,407 transMapRnaV5,416 transMapRnaV5,429 transMapRnaV5,439 transMapRnaV5,451 transMapRnaV5,472 transMapRnaV5,486 transMapRnaV5,497 transMapRnaV5,501 transMapRnaV5,507 transMapRnaV5,546 transMapRnaV5,554 transMapRnaV5,572 transMapRnaV5,588 transMapRnaV5,611 transMapRnaV5,660 transMapRnaV5,672 transMapRnaV5,774 transMapV5,21 transMapV5,31 transMapV5,39 transMapV5,56 transMapV5,91 transMapV5,98 transMapV5,103 transMapV5,121 transMapV5,126 transMapV5,132 transMapV5,136 transMapV5,173 transMapV5,194 transMapV5,201 transMapV5,236 transMapV5,253 transMapV5,276 transMapV5,283 transMapV5,326 transMapV5,330 transMapV5,334 transMapV5,346 transMapV5,352 transMapV5,369 transMapV5,377 transMapV5,384 transMapV5,386 transMapV5,397 transMapV5,402 transMapV5,406 transMapV5,414 transMapV5,418 transMapV5,420 transMapV5,451 transMapV5,478 transMapV5,488 transMapV5,491 transMapV5,513 transMapV5,522 transMapV5,535 transMapV5,545 transMapV5,557 transMapV5,578 transMapV5,592 transMapV5,603 transMapV5,607 transMapV5,613 transMapV5,652 transMapV5,660 transMapV5,678 transMapV5,694 transMapV5,717 transMapV5,766 transMapV5,778 transMapV5,880 ucscToRefSeq,21 ucscToRefSeq,27 ucscToRefSeq,32 ucscToRefSeq,37 uniprot,22 uniprot,40 uniprot,53 uniprot,69 uniprot,81 uniprot,87 uniprot,94 uniprot,102 uniprot,119 uniprot,184 uniprot,202 uniprot,215 uniprot,233 uniprot,259 uniprot,270 uniprot,281 uniprot,308 uniprot,379 uniprot,410 uniprot,421 uniprot,428 uniprot,444 uniprot,463 uniprot,485 uniprot,493 uniprot,510 uniprot,527 uniprot,534 uniprot,539 uniprot,543 uniprot,547 uniprot,562 uniprot,571 uniprot,607 uniprot,640 uniprot,649 uniprot,668 uniprot,698 uniprot,748 uniprot,785 uniprot,789 uniprot,791 uniprot,797 uniprot,802 uniprot,810 uniprot,812 uniprot,819 uniprot,832 uniprot,836 uniprot,855 uniprot,873 uniprot,883 uniprot,903 uniprot,913 uniprot,923 uniprot,927 uniprot,935 uniprot,944 uniprot,947 uniprot,953 uniprot,961 uniprot,969 uniprot,1009 uniprot,1036 uniprot,1039 uniprot,1054 uniprot,1090 uniprot,1112 uniprot,1126 uniprot,1136 uniprot,1140 uniprot,1156 uniprot,1172 uniprot,1212 uniprot,1221 uniprot,1243 uniprot,1253 uniprot,1267 uniprot,1273 uniprot,1278 uniprot,1294 uniprot,1303 uniprot,1307 uniprot,1321 uniprot,1332 uniprot,1339 uniprot,1358 uniprot,1372 uniprot,1376 uniprot,1384 uniprot,1388 uniprot,1409 uniprot,1414 uniprot,1428 uniprot,1431 uniprot,1462 uniprot,1508 uniprot,1512 uniprot,1519 uniprot,1522 uniprot,1527 uniprot,1535 uniprot,1547 uniprot,1574 uniprot,1582 uniprot,1588 uniprot,1592 uniprot,1595 uniprot,1606 uniprot,1609 uniprot,1612 uniprot,1618 uniprot,1621 uniprot,1628 uniprot,1640 uniprot,1664 uniprot,1667 uniprot,1678 uniprot,1681 uniprot,1701 uniprot,1707 uniprot,1711 uniprot,1719 uniprot,1723 uniprot,1729 uniprot,1743 uniprot,1746 uniprot,1753 uniprot,1773 uniprot,1796 uniprot,1857 uniprot,1861 uniprot,1893 uniprot,1963 uniprot,1988 uniprot,1992 uniprot,2024 uniprot,2029 windowmaskerSdust,22 windowmaskerSdust,28 windowmaskerSdust,32 windowmaskerSdust,36 windowmaskerSdust,42 windowmaskerSdust,55 windowmaskerSdust,74 windowmaskerSdust,81 xenoMrna,36 xenoMrna,47 xenoMrna,59 xenoMrna,69 xenoMrna,72 xenoMrna,75 xenoMrna,82 xenoMrna,90 xenoMrna,94 xenoMrna,97 xenoMrna,103 xenoMrna,121 xenoMrna,126 xenoMrna,129 xenoMrna,144 xenoMrna,148 xenoMrna,158 xenoMrna,170 xenoMrna,180 xenoMrna,185 xenoMrna,195 xenoMrna,200 xenoMrna,207 xenoMrna,218 xenoMrna,221 xenoMrna,224 xenoMrna,229 xenoMrna,239 xenoMrna,242 xenoMrna,248 xenoMrna,258 xenoMrna,265 xenoMrna,274 xenoMrna,295 xenoMrna,305 xenoMrna,337 xenoMrna,344 xenoMrna,358 xenoMrna,367 xenoMrna,375 xenoMrna,384 xenoMrna,393 xenoMrna,410 xenoMrna,417 xenoMrna,428 xenoMrna,451 xenoMrna,459 xenoMrna,464 xenoMrna,478 xenoMrna,481 xenoMrna,498 xenoMrna,507 xenoMrna,513 xenoMrna,526 xenoMrna,592 xenoRefGene,26 xenoRefGene,33 xenoRefGene,48 xenoRefGene,55 xenoRefGene,59 xenoRefGene,63 xenoRefGene,74 xenoRefGene,89 xenoRefGene,92 xenoRefGene,95 xenoRefGene,109 xenoRefGene,115 xenoRefGene,120 xenoRefGene,125 xenoRefGene,133 xenoRefGene,161 xenoRefGene,166 xenoRefGene,181 xenoRefGene,196 xenoRefGene,209 xenoRefGene,216 xenoRefGene,221 xenoRefGene,244 xenoRefGene,247 xenoRefGene,263 xenoRefGene,272 xenoRefGene,295 their evaSnp4,751 evaSnp5,751 nestedRepeats,190 uniprot,62 uniprot,723 uniprot,1101 them chainHg19,797 chainNetHg19,800 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netHg19,797 rmsk,318 uniprot,20 uniprot,173 uniprot,483 then chainHg19,647 chainHg19,786 chainHg19,871 chainNetHg19,650 chainNetHg19,789 chainNetHg19,874 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 evaSnp4,399 evaSnp4,747 evaSnp4,815 evaSnp4,823 evaSnp5,399 evaSnp5,747 evaSnp5,815 evaSnp5,823 nestedRepeats,232 netHg19,647 netHg19,786 netHg19,871 transMapV5,129 uniprot,1083 uniprot,1516 there cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 est,619 evaSnp4,149 evaSnp4,619 evaSnp5,149 evaSnp5,619 intronEst,700 transMapEnsemblV5,450 transMapEstV5,419 transMapRefSeqV5,419 transMapRnaV5,419 transMapV5,525 uniprot,705 uniprot,1092 xenoMrna,115 therefore evaSnp4,878 evaSnp5,878 gold,122 refSeqComposite,1630 uniprot,968 uniprot,1145 these augustusGene,95 augustusGene,190 chainHg19,52 chainHg19,100 chainHg19,407 chainHg19,659 chainNetHg19,55 chainNetHg19,103 chainNetHg19,410 chainNetHg19,662 ensGene,10 ensGene,154 est,587 evaSnp4,838 evaSnp4,943 evaSnp5,838 evaSnp5,943 intronEst,668 microsat,24 nestedRepeats,262 nestedRepeats,266 netHg19,52 netHg19,100 netHg19,407 netHg19,659 refSeqComposite,321 refSeqComposite,331 refSeqComposite,793 refSeqComposite,1291 refSeqComposite,1427 rmsk,235 simpleRepeat,33 transMapEnsemblV5,457 transMapEnsemblV5,466 transMapEnsemblV5,521 transMapEnsemblV5,582 transMapEstV5,426 transMapEstV5,435 transMapEstV5,490 transMapEstV5,551 transMapRefSeqV5,426 transMapRefSeqV5,435 transMapRefSeqV5,490 transMapRefSeqV5,551 transMapRnaV5,426 transMapRnaV5,435 transMapRnaV5,490 transMapRnaV5,551 transMapV5,12 transMapV5,532 transMapV5,541 transMapV5,596 transMapV5,657 uniprot,99 uniprot,130 uniprot,1160 thesis chainHg19,1017 chainNetHg19,1020 netHg19,1017 they chainHg19,324 chainNetHg19,327 netHg19,324 refSeqComposite,247 refSeqComposite,291 refSeqComposite,356 refSeqComposite,418 uniprot,179 thibaud-nissen refGene,364 refSeqComposite,1751 xenoRefGene,323 thick chainHg19,43 chainNetHg19,46 netHg19,43 refSeqComposite,993 refSeqComposite,1009 thin refSeqComposite,991 refSeqComposite,998 this augustusGene,13 augustusGene,106 augustusGene,224 chainHg19,13 chainHg19,170 chainHg19,295 chainHg19,394 chainHg19,690 chainHg19,812 chainNetHg19,16 chainNetHg19,173 chainNetHg19,298 chainNetHg19,397 chainNetHg19,693 chainNetHg19,815 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ensGene,119 ensGene,135 est,11 est,47 est,112 est,139 est,375 est,412 est,592 est,628 est,641 est,722 evaSnp4,18 evaSnp4,1032 evaSnp4,1051 evaSnp4,1128 evaSnp5,18 evaSnp5,1032 evaSnp5,1051 evaSnp5,1128 gap,8 gap,36 gap,44 gap,74 gap,115 gc5BaseBw,38 gc5BaseBw,77 genscan,11 genscan,65 genscan,128 gold,9 gold,38 gold,43 gold,66 gold,139 intronEst,13 intronEst,131 intronEst,193 intronEst,220 intronEst,456 intronEst,493 intronEst,673 intronEst,709 intronEst,722 intronEst,803 intronEst,806 microsat,11 microsat,50 microsat,99 mrna,28 mrna,58 mrna,85 mrna,321 mrna,349 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netHg19,13 netHg19,170 netHg19,295 netHg19,394 netHg19,690 netHg19,812 refGene,39 refGene,85 refGene,123 refGene,178 refGene,217 refGene,253 refGene,318 refSeqComposite,57 refSeqComposite,144 refSeqComposite,497 refSeqComposite,561 refSeqComposite,722 refSeqComposite,812 refSeqComposite,851 refSeqComposite,1385 refSeqComposite,1433 refSeqComposite,1621 refSeqComposite,1707 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 transMapEnsemblV5,15 transMapEnsemblV5,95 transMapEnsemblV5,105 transMapEnsemblV5,133 transMapEnsemblV5,286 transMapEnsemblV5,674 transMapEstV5,13 transMapEstV5,64 transMapEstV5,74 transMapEstV5,102 transMapEstV5,255 transMapEstV5,643 transMapRefSeqV5,14 transMapRefSeqV5,64 transMapRefSeqV5,74 transMapRefSeqV5,102 transMapRefSeqV5,255 transMapRefSeqV5,643 transMapRnaV5,14 transMapRnaV5,64 transMapRnaV5,74 transMapRnaV5,102 transMapRnaV5,255 transMapRnaV5,643 transMapV5,170 transMapV5,180 transMapV5,208 transMapV5,361 transMapV5,749 ucscToRefSeq,9 ucscToRefSeq,40 uniprot,12 uniprot,134 uniprot,149 uniprot,218 uniprot,220 uniprot,653 uniprot,663 uniprot,871 uniprot,878 uniprot,1018 uniprot,1058 uniprot,1063 uniprot,1248 uniprot,1259 uniprot,1352 uniprot,1447 uniprot,1530 uniprot,1553 uniprot,1562 uniprot,1657 uniprot,1674 uniprot,1688 uniprot,1939 windowmaskerSdust,13 windowmaskerSdust,49 windowmaskerSdust,87 xenoMrna,11 xenoMrna,33 xenoMrna,63 xenoMrna,133 xenoMrna,160 xenoMrna,396 xenoMrna,424 xenoRefGene,11 xenoRefGene,36 xenoRefGene,45 xenoRefGene,83 xenoRefGene,138 xenoRefGene,177 xenoRefGene,213 xenoRefGene,278 those est,368 est,401 intronEst,449 intronEst,482 microsat,62 mrna,314 nestedRepeats,272 refGene,266 refSeqComposite,218 refSeqComposite,347 refSeqComposite,1234 uniprot,729 xenoMrna,389 xenoMrna,488 xenoRefGene,226 thousands chainHg19,250 chainNetHg19,253 netHg19,250 three uniprot,1227 three-step uniprot,989 through evaSnp4,707 evaSnp5,707 gap,108 nestedRepeats,97 refGene,128 refSeqComposite,727 refSeqComposite,1320 refSeqComposite,1358 rmsk,309 transMapEnsemblV5,527 transMapEstV5,496 transMapRefSeqV5,496 transMapRnaV5,496 transMapV5,602 uniprot,98 uniprot,133 uniprot,633 uniprot,804 uniprot,1521 xenoRefGene,88 tick evaSnp4,66 evaSnp4,105 evaSnp5,66 evaSnp5,105 time chainHg19,795 chainNetHg19,798 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netHg19,795 tissue est,204 est,239 est,254 intronEst,285 intronEst,320 intronEst,335 mrna,150 mrna,185 mrna,200 xenoMrna,225 xenoMrna,260 xenoMrna,275 tissues est,247 intronEst,328 mrna,193 xenoMrna,268 to animalQtl,42 animalQtl,46 animalQtl,64 animalQtl,70 animalQtl,135 animalQtl,140 animalQtl,273 animalQtl,356 augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 chainHg19,23 chainHg19,70 chainHg19,143 chainHg19,211 chainHg19,223 chainHg19,315 chainHg19,326 chainHg19,331 chainHg19,343 chainHg19,349 chainHg19,372 chainHg19,453 chainHg19,467 chainHg19,551 chainHg19,652 chainHg19,788 chainHg19,800 chainHg19,840 chainHg19,863 chainHg19,873 chainNetHg19,26 chainNetHg19,73 chainNetHg19,146 chainNetHg19,214 chainNetHg19,226 chainNetHg19,318 chainNetHg19,329 chainNetHg19,334 chainNetHg19,346 chainNetHg19,352 chainNetHg19,375 chainNetHg19,456 chainNetHg19,470 chainNetHg19,554 chainNetHg19,655 chainNetHg19,791 chainNetHg19,803 chainNetHg19,843 chainNetHg19,866 chainNetHg19,876 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 ensGene,43 ensGene,149 est,94 est,121 est,158 est,162 est,177 est,184 est,188 est,206 est,226 est,233 est,332 est,381 est,391 est,415 est,436 est,445 est,514 est,579 est,639 est,733 evaSnp4,89 evaSnp4,142 evaSnp4,145 evaSnp4,171 evaSnp4,180 evaSnp4,272 evaSnp4,313 evaSnp4,375 evaSnp4,422 evaSnp4,431 evaSnp4,513 evaSnp4,563 evaSnp4,602 evaSnp4,659 evaSnp4,669 evaSnp4,693 evaSnp4,701 evaSnp4,712 evaSnp4,750 evaSnp4,811 evaSnp4,820 evaSnp4,933 evaSnp4,958 evaSnp4,961 evaSnp4,971 evaSnp4,1012 evaSnp4,1104 evaSnp5,89 evaSnp5,142 evaSnp5,145 evaSnp5,171 evaSnp5,180 evaSnp5,272 evaSnp5,313 evaSnp5,375 evaSnp5,422 evaSnp5,431 evaSnp5,513 evaSnp5,563 evaSnp5,602 evaSnp5,659 evaSnp5,669 evaSnp5,693 evaSnp5,701 evaSnp5,712 evaSnp5,750 evaSnp5,811 evaSnp5,820 evaSnp5,933 evaSnp5,958 evaSnp5,961 evaSnp5,971 evaSnp5,1012 evaSnp5,1104 gc5BaseBw,48 genscan,95 genscan,105 genscan,114 genscan,145 genscan,171 gold,131 intronEst,55 intronEst,175 intronEst,202 intronEst,239 intronEst,243 intronEst,258 intronEst,265 intronEst,269 intronEst,287 intronEst,307 intronEst,314 intronEst,413 intronEst,462 intronEst,472 intronEst,496 intronEst,517 intronEst,526 intronEst,595 intronEst,660 intronEst,720 intronEst,817 microsat,18 microsat,38 microsat,121 mrna,67 mrna,104 mrna,108 mrna,123 mrna,130 mrna,134 mrna,152 mrna,172 mrna,179 mrna,278 mrna,327 mrna,337 mrna,352 mrna,375 mrna,450 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netHg19,23 netHg19,70 netHg19,143 netHg19,211 netHg19,223 netHg19,315 netHg19,326 netHg19,331 netHg19,343 netHg19,349 netHg19,372 netHg19,453 netHg19,467 netHg19,551 netHg19,652 netHg19,788 netHg19,800 netHg19,840 netHg19,863 netHg19,873 refGene,55 refGene,153 refGene,189 refGene,196 refGene,220 refGene,246 refSeqComposite,54 refSeqComposite,114 refSeqComposite,155 refSeqComposite,167 refSeqComposite,173 refSeqComposite,305 refSeqComposite,308 refSeqComposite,323 refSeqComposite,367 refSeqComposite,439 refSeqComposite,493 refSeqComposite,675 refSeqComposite,700 refSeqComposite,739 refSeqComposite,752 refSeqComposite,774 refSeqComposite,823 refSeqComposite,830 refSeqComposite,854 refSeqComposite,901 refSeqComposite,907 refSeqComposite,915 refSeqComposite,921 refSeqComposite,934 refSeqComposite,976 refSeqComposite,1025 refSeqComposite,1058 refSeqComposite,1094 refSeqComposite,1105 refSeqComposite,1171 refSeqComposite,1437 refSeqComposite,1531 refSeqComposite,1584 refSeqComposite,1683 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 transMapEnsemblV5,111 transMapEnsemblV5,121 transMapEnsemblV5,177 transMapEnsemblV5,200 transMapEnsemblV5,258 transMapEnsemblV5,291 transMapEnsemblV5,299 transMapEnsemblV5,316 transMapEnsemblV5,330 transMapEnsemblV5,342 transMapEnsemblV5,381 transMapEnsemblV5,426 transMapEnsemblV5,436 transMapEnsemblV5,469 transMapEnsemblV5,475 transMapEnsemblV5,488 transMapEnsemblV5,648 transMapEnsemblV5,690 transMapEnsemblV5,769 transMapEstV5,80 transMapEstV5,90 transMapEstV5,146 transMapEstV5,169 transMapEstV5,227 transMapEstV5,260 transMapEstV5,268 transMapEstV5,285 transMapEstV5,299 transMapEstV5,311 transMapEstV5,350 transMapEstV5,395 transMapEstV5,405 transMapEstV5,438 transMapEstV5,444 transMapEstV5,457 transMapEstV5,617 transMapEstV5,659 transMapEstV5,738 transMapRefSeqV5,80 transMapRefSeqV5,90 transMapRefSeqV5,146 transMapRefSeqV5,169 transMapRefSeqV5,227 transMapRefSeqV5,260 transMapRefSeqV5,268 transMapRefSeqV5,285 transMapRefSeqV5,299 transMapRefSeqV5,311 transMapRefSeqV5,350 transMapRefSeqV5,395 transMapRefSeqV5,405 transMapRefSeqV5,438 transMapRefSeqV5,444 transMapRefSeqV5,457 transMapRefSeqV5,617 transMapRefSeqV5,659 transMapRefSeqV5,738 transMapRnaV5,80 transMapRnaV5,90 transMapRnaV5,146 transMapRnaV5,169 transMapRnaV5,227 transMapRnaV5,260 transMapRnaV5,268 transMapRnaV5,285 transMapRnaV5,299 transMapRnaV5,311 transMapRnaV5,350 transMapRnaV5,395 transMapRnaV5,405 transMapRnaV5,438 transMapRnaV5,444 transMapRnaV5,457 transMapRnaV5,617 transMapRnaV5,659 transMapRnaV5,738 transMapV5,79 transMapV5,89 transMapV5,120 transMapV5,131 transMapV5,154 transMapV5,186 transMapV5,196 transMapV5,252 transMapV5,275 transMapV5,333 transMapV5,366 transMapV5,374 transMapV5,391 transMapV5,405 transMapV5,417 transMapV5,456 transMapV5,501 transMapV5,511 transMapV5,544 transMapV5,550 transMapV5,563 transMapV5,723 transMapV5,765 transMapV5,844 ucscToRefSeq,17 unipAliSwissprot,8 unipAliTrembl,8 uniprot,27 uniprot,86 uniprot,101 uniprot,118 uniprot,201 uniprot,214 uniprot,226 uniprot,245 uniprot,492 uniprot,525 uniprot,552 uniprot,559 uniprot,658 uniprot,682 uniprot,764 uniprot,784 uniprot,801 uniprot,849 uniprot,917 uniprot,920 uniprot,955 uniprot,974 uniprot,1008 uniprot,1088 uniprot,1196 uniprot,1215 uniprot,1220 uniprot,1247 uniprot,1285 uniprot,1336 uniprot,1356 uniprot,1369 uniprot,1405 uniprot,1413 uniprot,1460 uniprot,1473 uniprot,1478 uniprot,1493 uniprot,1518 uniprot,1551 uniprot,1676 uniprot,1761 uniprot,1802 uniprot,1828 uniprot,1846 uniprot,1851 uniprot,1856 uniprot,1884 uniprot,1890 uniprot,1975 windowmaskerSdust,47 xenoMrna,87 xenoMrna,142 xenoMrna,179 xenoMrna,183 xenoMrna,198 xenoMrna,205 xenoMrna,209 xenoMrna,227 xenoMrna,247 xenoMrna,254 xenoMrna,353 xenoMrna,402 xenoMrna,412 xenoMrna,427 xenoMrna,450 xenoMrna,525 xenoRefGene,113 xenoRefGene,149 xenoRefGene,156 xenoRefGene,180 xenoRefGene,206 together chainHg19,123 chainNetHg19,126 netHg19,123 tolerate chainHg19,92 chainNetHg19,95 netHg19,92 tolerated uniprot,1257 too refSeqComposite,932 tool animalQtl,307 animalQtl,334 animalQtl,377 est,803 evaSnp4,1068 evaSnp4,1099 evaSnp5,1068 evaSnp5,1099 intronEst,887 mrna,520 refGene,346 refSeqComposite,1504 refSeqComposite,1733 transMapEnsemblV5,612 transMapEnsemblV5,643 transMapEstV5,581 transMapEstV5,612 transMapRefSeqV5,581 transMapRefSeqV5,612 transMapRnaV5,581 transMapRnaV5,612 transMapV5,687 transMapV5,718 uniprot,1766 uniprot,1797 windowmaskerSdust,24 xenoMrna,595 xenoRefGene,305 toolkit windowmaskerSdust,31 windowmaskerSdust,38 tools animalQtl,60 animalQtl,184 nestedRepeats,314 rmsk,337 uniprot,1873 top chainHg19,508 chainNetHg19,511 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netHg19,508 refGene,133 refSeqComposite,733 uniprot,1304 uniprot,1340 uniprot,1489 xenoRefGene,93 top-level chainHg19,383 chainHg19,403 chainNetHg19,386 chainNetHg19,406 netHg19,383 netHg19,403 top-scoring uniprot,792 topological uniprot,330 track augustusGene,14 augustusGene,107 chainHg19,14 chainHg19,58 chainHg19,61 chainHg19,119 chainHg19,259 chainHg19,262 chainHg19,310 chainHg19,345 chainHg19,377 chainHg19,564 chainHg19,691 chainHg19,754 chainNetHg19,17 chainNetHg19,61 chainNetHg19,64 chainNetHg19,122 chainNetHg19,262 chainNetHg19,265 chainNetHg19,313 chainNetHg19,348 chainNetHg19,380 chainNetHg19,567 chainNetHg19,694 chainNetHg19,757 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ensGene,136 est,12 est,48 est,113 est,138 est,150 est,376 est,642 est,723 evaSnp4,19 evaSnp4,75 evaSnp4,270 evaSnp4,416 evaSnp4,1052 evaSnp4,1129 evaSnp5,19 evaSnp5,75 evaSnp5,270 evaSnp5,416 evaSnp5,1052 evaSnp5,1129 gap,9 gap,75 gc5BaseBw,15 gc5BaseBw,39 genscan,12 genscan,66 genscan,76 genscan,87 gold,10 gold,67 gold,140 intronEst,14 intronEst,126 intronEst,132 intronEst,194 intronEst,219 intronEst,231 intronEst,457 intronEst,723 intronEst,804 intronEst,807 microsat,12 microsat,51 microsat,59 microsat,87 mrna,13 mrna,29 mrna,59 mrna,84 mrna,96 mrna,322 mrna,440 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netHg19,14 netHg19,58 netHg19,61 netHg19,119 netHg19,259 netHg19,262 netHg19,310 netHg19,345 netHg19,377 netHg19,564 netHg19,691 netHg19,754 refGene,19 refGene,40 refGene,86 refGene,124 refGene,136 refGene,179 refGene,208 refGene,319 refSeqComposite,17 refSeqComposite,45 refSeqComposite,145 refSeqComposite,149 refSeqComposite,311 refSeqComposite,315 refSeqComposite,328 refSeqComposite,335 refSeqComposite,470 refSeqComposite,498 refSeqComposite,508 refSeqComposite,562 refSeqComposite,723 refSeqComposite,736 refSeqComposite,754 refSeqComposite,813 refSeqComposite,842 refSeqComposite,867 refSeqComposite,1197 refSeqComposite,1212 refSeqComposite,1336 refSeqComposite,1708 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 transMapEnsemblV5,16 transMapEnsemblV5,96 transMapEnsemblV5,106 transMapEnsemblV5,231 transMapEnsemblV5,569 transMapEnsemblV5,573 transMapEnsemblV5,675 transMapEstV5,14 transMapEstV5,65 transMapEstV5,75 transMapEstV5,200 transMapEstV5,538 transMapEstV5,542 transMapEstV5,644 transMapRefSeqV5,15 transMapRefSeqV5,65 transMapRefSeqV5,75 transMapRefSeqV5,200 transMapRefSeqV5,538 transMapRefSeqV5,542 transMapRefSeqV5,644 transMapRnaV5,15 transMapRnaV5,65 transMapRnaV5,75 transMapRnaV5,200 transMapRnaV5,538 transMapRnaV5,542 transMapRnaV5,644 transMapV5,101 transMapV5,171 transMapV5,181 transMapV5,306 transMapV5,644 transMapV5,648 transMapV5,750 ucscToRefSeq,10 ucscToRefSeq,41 uniprot,13 uniprot,104 uniprot,150 uniprot,219 uniprot,221 uniprot,234 uniprot,422 uniprot,429 uniprot,576 uniprot,654 uniprot,710 uniprot,1004 uniprot,1208 uniprot,1277 uniprot,1554 uniprot,1563 uniprot,1583 uniprot,1658 uniprot,1671 uniprot,1689 uniprot,1713 uniprot,1754 uniprot,1940 windowmaskerSdust,14 windowmaskerSdust,50 windowmaskerSdust,88 xenoMrna,12 xenoMrna,34 xenoMrna,64 xenoMrna,134 xenoMrna,159 xenoMrna,171 xenoMrna,397 xenoMrna,515 xenoRefGene,12 xenoRefGene,37 xenoRefGene,46 xenoRefGene,84 xenoRefGene,96 xenoRefGene,139 xenoRefGene,168 xenoRefGene,279 tracks augustusGene,41 chainHg19,768 chainNetHg19,771 ensGene,24 est,56 est,421 evaSnp4,944 evaSnp5,944 genscan,56 genscan,74 intronEst,140 intronEst,502 mrna,37 mrna,360 netHg19,768 refGene,76 refGene,94 refSeqComposite,99 refSeqComposite,135 refSeqComposite,169 refSeqComposite,404 refSeqComposite,454 refSeqComposite,593 refSeqComposite,601 refSeqComposite,1137 refSeqComposite,1147 refSeqComposite,1223 refSeqComposite,1292 refSeqComposite,1371 refSeqComposite,1472 refSeqComposite,1579 refSeqComposite,1672 refSeqComposite,1697 transMapEnsemblV5,104 transMapEnsemblV5,522 transMapEnsemblV5,583 transMapEstV5,73 transMapEstV5,491 transMapEstV5,552 transMapRefSeqV5,73 transMapRefSeqV5,491 transMapRefSeqV5,552 transMapRnaV5,73 transMapRnaV5,491 transMapRnaV5,552 transMapV5,13 transMapV5,179 transMapV5,597 transMapV5,658 uniprot,91 uniprot,123 uniprot,206 uniprot,409 uniprot,1643 xenoMrna,42 xenoMrna,435 xenoRefGene,54 traditional chainHg19,84 chainNetHg19,87 netHg19,84 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 trait animalQtl,5 animalQtl,16 animalQtl,24 animalQtl,67 animalQtl,110 transcribed est,41 est,456 intronEst,53 intronEst,537 refSeqComposite,430 transcript est,551 evaSnp4,459 evaSnp4,783 evaSnp5,459 evaSnp5,783 intronEst,632 refSeqComposite,532 refSeqComposite,882 refSeqComposite,910 refSeqComposite,918 refSeqComposite,989 refSeqComposite,1032 refSeqComposite,1053 refSeqComposite,1118 refSeqComposite,1128 transMapEnsemblV5,153 transMapEnsemblV5,324 transMapEnsemblV5,377 transMapEstV5,122 transMapEstV5,293 transMapEstV5,346 transMapRefSeqV5,122 transMapRefSeqV5,293 transMapRefSeqV5,346 transMapRnaV5,122 transMapRnaV5,293 transMapRnaV5,346 transMapV5,228 transMapV5,399 transMapV5,452 uniprot,837 uniprot,908 uniprot,918 uniprot,945 uniprot,963 uniprot,1003 uniprot,1076 uniprot,1223 uniprot,1237 uniprot,1249 uniprot,1263 uniprot,1268 uniprot,1291 uniprot,1325 uniprot,1596 uniprot,1610 uniprot,1623 transcript-genome uniprot,813 uniprot,1619 transcript-to-genome uniprot,806 transcript_ablation evaSnp4,776 evaSnp5,776 transcriptase est,507 intronEst,588 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 est,98 est,490 est,537 est,559 intronEst,179 intronEst,571 intronEst,618 intronEst,640 transcriptional genscan,28 transcripts augustusGene,124 evaSnp4,382 evaSnp4,863 evaSnp5,382 evaSnp5,863 ncbiRefSeqGenomicDiff,7 refGene,417 refSeqComposite,255 refSeqComposite,322 refSeqComposite,469 refSeqComposite,520 refSeqComposite,553 refSeqComposite,1804 transMapEnsemblV5,341 transMapEstV5,310 transMapRefSeqV5,310 transMapRnaV5,310 transMapV5,416 uniprot,786 uniprot,833 uniprot,928 uniprot,936 uniprot,957 uniprot,985 uniprot,992 uniprot,1011 uniprot,1022 uniprot,1032 uniprot,1056 uniprot,1069 uniprot,1091 uniprot,1096 uniprot,1108 uniprot,1127 uniprot,1168 uniprot,1338 uniprot,1474 xenoRefGene,376 translated transMapV5,155 xenoMrna,14 xenoMrna,79 xenoMrna,99 xenoMrna,468 translating evaSnp4,874 evaSnp5,874 translation augustusGene,57 translational genscan,29 transmap transMapEnsemblV5,1 transMapEnsemblV5,3 transMapEnsemblV5,25 transMapEnsemblV5,440 transMapEnsemblV5,499 transMapEnsemblV5,588 transMapEnsemblV5,591 transMapEnsemblV5,594 transMapEnsemblV5,597 transMapEnsemblV5,663 transMapEstV5,1 transMapEstV5,3 transMapEstV5,23 transMapEstV5,409 transMapEstV5,468 transMapEstV5,557 transMapEstV5,560 transMapEstV5,563 transMapEstV5,566 transMapEstV5,632 transMapRefSeqV5,1 transMapRefSeqV5,3 transMapRefSeqV5,23 transMapRefSeqV5,409 transMapRefSeqV5,468 transMapRefSeqV5,557 transMapRefSeqV5,560 transMapRefSeqV5,563 transMapRefSeqV5,566 transMapRefSeqV5,632 transMapRnaV5,1 transMapRnaV5,3 transMapRnaV5,23 transMapRnaV5,409 transMapRnaV5,468 transMapRnaV5,557 transMapRnaV5,560 transMapRnaV5,563 transMapRnaV5,566 transMapRnaV5,632 transMapV5,1 transMapV5,3 transMapV5,22 transMapV5,70 transMapV5,100 transMapV5,157 transMapV5,515 transMapV5,574 transMapV5,663 transMapV5,666 transMapV5,669 transMapV5,672 transMapV5,738 transmembrane unipLocTransMemb,1 unipLocTransMemb,3 uniprot,265 uniprot,273 uniprot,515 uniprot,567 transposable nestedRepeats,379 rmsk,402 transposons chainHg19,565 chainHg19,589 chainHg19,898 chainNetHg19,568 chainNetHg19,592 chainNetHg19,901 netHg19,565 netHg19,589 netHg19,898 trembl unipAliTrembl,1 unipAliTrembl,6 uniprot,4 uniprot,44 uniprot,79 uniprot,185 uniprot,192 uniprot,199 uniprot,211 uniprot,500 uniprot,604 uniprot,661 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 tried uniprot,869 trimming chainHg19,796 chainNetHg19,799 netHg19,796 trna rmsk,190 true augustusGene,132 windowmaskerSdust,60 windowmaskerSdust,69 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 tsukanov evaSnp4,1176 evaSnp5,1176 turn chainHg19,332 chainNetHg19,335 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netHg19,332 refGene,171 refSeqComposite,805 xenoRefGene,131 turns uniprot,370 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two chainHg19,904 chainNetHg19,907 evaSnp4,109 evaSnp4,134 evaSnp5,109 evaSnp5,134 netHg19,904 transMapEnsemblV5,452 transMapEnsemblV5,489 transMapEstV5,421 transMapEstV5,458 transMapRefSeqV5,421 transMapRefSeqV5,458 transMapRnaV5,421 transMapRnaV5,458 transMapV5,527 transMapV5,564 uniprot,71 uniprot,630 uniprot,1641 xenoMrna,67 xenoMrna,104 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type est,166 est,196 evaSnp4,448 evaSnp4,624 evaSnp5,448 evaSnp5,624 gold,145 intronEst,247 intronEst,277 mrna,112 mrna,142 uniprot,65 uniprot,271 uniprot,464 uniprot,614 xenoMrna,187 xenoMrna,217 types animalQtl,421 augustusGene,89 chainHg19,504 chainNetHg19,507 est,245 est,424 gap,121 gold,136 intronEst,326 intronEst,505 mrna,191 mrna,363 netHg19,504 refSeqComposite,871 refSeqComposite,886 transMapEnsemblV5,138 transMapEstV5,107 transMapRefSeqV5,107 transMapRnaV5,107 transMapV5,213 uniprot,676 xenoMrna,266 xenoMrna,438 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 refSeqComposite,429 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 est,30 est,459 gc5BaseBw,33 intronEst,42 intronEst,540 typing evaSnp4,188 evaSnp5,188 u chainHg19,1067 chainNetHg19,1070 netHg19,1067 ucsc est,727 evaSnp4,259 evaSnp4,294 evaSnp4,404 evaSnp4,733 evaSnp4,842 evaSnp4,935 evaSnp4,1144 evaSnp4,1236 evaSnp5,259 evaSnp5,294 evaSnp5,404 evaSnp5,733 evaSnp5,842 evaSnp5,935 evaSnp5,1144 evaSnp5,1236 intronEst,811 mrna,444 nestedRepeats,245 refGene,1 refGene,3 refGene,323 refSeqComposite,43 refSeqComposite,47 refSeqComposite,70 refSeqComposite,192 refSeqComposite,333 refSeqComposite,477 refSeqComposite,483 refSeqComposite,591 refSeqComposite,1151 refSeqComposite,1201 refSeqComposite,1209 refSeqComposite,1413 refSeqComposite,1598 refSeqComposite,1712 transMapEnsemblV5,35 transMapEnsemblV5,162 transMapEnsemblV5,183 transMapEnsemblV5,682 transMapEstV5,33 transMapEstV5,131 transMapEstV5,152 transMapEstV5,651 transMapRefSeqV5,33 transMapRefSeqV5,131 transMapRefSeqV5,152 transMapRefSeqV5,651 transMapRnaV5,33 transMapRnaV5,131 transMapRnaV5,152 transMapRnaV5,651 transMapV5,32 transMapV5,237 transMapV5,258 transMapV5,757 ucscToRefSeq,12 unipAliSwissprot,3 unipAliTrembl,3 uniprot,107 uniprot,190 uniprot,773 uniprot,826 uniprot,827 uniprot,844 uniprot,1206 uniprot,1275 uniprot,1668 uniprot,1947 xenoMrna,519 xenoRefGene,283 ucsc-generated evaSnp4,285 evaSnp5,285 ucsc-style evaSnp4,702 evaSnp5,702 ucscclass evaSnp4,307 evaSnp5,307 ucscclasses evaSnp4,339 evaSnp5,339 unambiguously refSeqComposite,1108 uncheck refSeqComposite,163 undergone refGene,107 refSeqComposite,614 xenoRefGene,67 underlies genscan,142 underlying refGene,38 uniprot,1682 xenoRefGene,35 underneath chainHg19,832 chainNetHg19,835 netHg19,832 unexpected uniprot,766 ungapped chainHg19,443 chainNetHg19,446 netHg19,443 uniprot unipChain,2 unipConflict,3 unipDisulfBond,3 unipDomain,2 unipInterest,2 unipLocCytopl,2 unipLocExtra,2 unipLocSignal,3 unipLocTransMemb,2 unipModif,3 unipMut,2 unipOther,3 unipRepeat,2 unipStruct,2 uniprot,1 uniprot,2 uniprot,23 uniprot,30 uniprot,41 uniprot,43 uniprot,68 uniprot,152 uniprot,237 uniprot,253 uniprot,264 uniprot,275 uniprot,286 uniprot,296 uniprot,322 uniprot,332 uniprot,337 uniprot,349 uniprot,358 uniprot,371 uniprot,380 uniprot,382 uniprot,392 uniprot,413 uniprot,424 uniprot,453 uniprot,494 uniprot,529 uniprot,544 uniprot,573 uniprot,669 uniprot,714 uniprot,721 uniprot,738 uniprot,750 uniprot,779 uniprot,924 uniprot,996 uniprot,1016 uniprot,1029 uniprot,1231 uniprot,1437 uniprot,1503 uniprot,1509 uniprot,1513 uniprot,1591 uniprot,1669 uniprot,1702 uniprot,1817 uniprot,1845 uniprot,1910 uniprot,1964 uniprot,1976 uniprot,1985 uniprot,1996 uniprot-annotated uniprot,1279 unipstruct.bb uniprot,1818 uniptogenome.over.chain.gz uniprot,1896 uniprot,1912 uniprot,1934 uniptogenomelift.psl.gz uniprot,1899 unique transMapEnsemblV5,383 transMapEnsemblV5,394 transMapEnsemblV5,431 transMapEnsemblV5,442 transMapEstV5,352 transMapEstV5,363 transMapEstV5,400 transMapEstV5,411 transMapRefSeqV5,352 transMapRefSeqV5,363 transMapRefSeqV5,400 transMapRefSeqV5,411 transMapRnaV5,352 transMapRnaV5,363 transMapRnaV5,400 transMapRnaV5,411 transMapV5,458 transMapV5,469 transMapV5,506 transMapV5,517 uniprot,1600 universal uniprot,1993 university animalQtl,201 animalQtl,227 animalQtl,239 animalQtl,247 animalQtl,286 chainHg19,918 chainHg19,952 chainHg19,998 chainHg19,1021 chainNetHg19,921 chainNetHg19,955 chainNetHg19,1001 chainNetHg19,1024 netHg19,918 netHg19,952 netHg19,998 netHg19,1021 unknown rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainHg19,226 chainNetHg19,229 est,602 intronEst,683 netHg19,226 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainHg19,184 chainNetHg19,187 netHg19,184 unspliced est,6 est,631 intronEst,121 intronEst,712 unsure rmsk,263 untranscribed refSeqComposite,407 untranslated evaSnp4,461 evaSnp4,785 evaSnp5,461 evaSnp5,785 up gold,73 refSeqComposite,1439 refSeqComposite,1633 rmsk,146 update est,782 intronEst,866 mrna,499 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 refGene,382 refSeqComposite,1769 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoMrna,574 xenoRefGene,341 updated refGene,42 uniprot,1566 xenoRefGene,39 upstream_gene_variant evaSnp4,797 evaSnp5,797 us uniprot,687 uniprot,1441 usda-nifa animalQtl,270 use est,163 evaSnp4,959 evaSnp5,959 gold,87 intronEst,244 mrna,109 refSeqComposite,35 refSeqComposite,1541 uniprot,991 uniprot,1021 uniprot,1073 uniprot,1225 xenoMrna,184 used augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 chainHg19,293 chainHg19,665 chainHg19,696 chainHg19,787 chainHg19,839 chainHg19,872 chainNetHg19,296 chainNetHg19,668 chainNetHg19,699 chainNetHg19,790 chainNetHg19,842 chainNetHg19,875 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 ensGene,36 est,120 est,272 est,331 est,570 evaSnp4,389 evaSnp4,724 evaSnp4,1103 evaSnp5,389 evaSnp5,724 evaSnp5,1103 genscan,159 gold,14 intronEst,201 intronEst,353 intronEst,412 intronEst,651 mrna,66 mrna,218 mrna,277 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netHg19,293 netHg19,665 netHg19,696 netHg19,787 netHg19,839 netHg19,872 refSeqComposite,233 refSeqComposite,243 refSeqComposite,996 rmsk,299 rmsk,341 transMapEnsemblV5,56 transMapEnsemblV5,64 transMapEnsemblV5,186 transMapEnsemblV5,238 transMapEnsemblV5,243 transMapEnsemblV5,263 transMapEnsemblV5,283 transMapEnsemblV5,315 transMapEnsemblV5,647 transMapEstV5,155 transMapEstV5,207 transMapEstV5,212 transMapEstV5,232 transMapEstV5,252 transMapEstV5,284 transMapEstV5,616 transMapRefSeqV5,155 transMapRefSeqV5,207 transMapRefSeqV5,212 transMapRefSeqV5,232 transMapRefSeqV5,252 transMapRefSeqV5,284 transMapRefSeqV5,616 transMapRnaV5,155 transMapRnaV5,207 transMapRnaV5,212 transMapRnaV5,232 transMapRnaV5,252 transMapRnaV5,284 transMapRnaV5,616 transMapV5,69 transMapV5,261 transMapV5,313 transMapV5,318 transMapV5,338 transMapV5,358 transMapV5,390 transMapV5,722 uniprot,1062 uniprot,1087 uniprot,1118 uniprot,1198 uniprot,1210 uniprot,1319 uniprot,1351 uniprot,1550 uniprot,1626 uniprot,1801 uniprot,1883 xenoMrna,141 xenoMrna,293 xenoMrna,352 useful chainHg19,278 chainHg19,477 chainNetHg19,281 chainNetHg19,480 microsat,20 netHg19,278 netHg19,477 user est,390 intronEst,471 mrna,336 transMapEnsemblV5,120 transMapEstV5,89 transMapRefSeqV5,89 transMapRnaV5,89 transMapV5,195 xenoMrna,411 users refGene,188 refSeqComposite,822 uniprot,406 uniprot,684 xenoRefGene,148 uses rmsk,79 using augustusGene,294 chainHg19,74 chainHg19,602 chainHg19,761 chainNetHg19,77 chainNetHg19,605 chainNetHg19,764 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 ensGene,64 est,652 evaSnp4,268 evaSnp4,841 evaSnp4,1066 evaSnp4,1143 evaSnp5,268 evaSnp5,841 evaSnp5,1066 evaSnp5,1143 intronEst,733 microsat,90 mrna,392 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netHg19,74 netHg19,602 netHg19,761 refGene,264 refSeqComposite,78 refSeqComposite,1152 refSeqComposite,1202 refSeqComposite,1215 refSeqComposite,1232 refSeqComposite,1304 refSeqComposite,1502 refSeqComposite,1587 refSeqComposite,1618 rmsk,15 rmsk,290 transMapEnsemblV5,75 transMapEnsemblV5,561 transMapEnsemblV5,610 transMapEnsemblV5,762 transMapEstV5,44 transMapEstV5,530 transMapEstV5,579 transMapEstV5,731 transMapRefSeqV5,44 transMapRefSeqV5,530 transMapRefSeqV5,579 transMapRefSeqV5,731 transMapRnaV5,44 transMapRnaV5,530 transMapRnaV5,579 transMapRnaV5,731 transMapV5,43 transMapV5,81 transMapV5,124 transMapV5,135 transMapV5,142 transMapV5,636 transMapV5,685 transMapV5,837 uniprot,217 uniprot,722 uniprot,1526 xenoMrna,467 xenoRefGene,224 ustat windowmaskerSdust,66 usually est,37 intronEst,49 nestedRepeats,192 transMapEnsemblV5,502 transMapEstV5,471 transMapRefSeqV5,471 transMapRnaV5,471 transMapV5,577 utilities refSeqComposite,1525 refSeqComposite,1594 utility refSeqComposite,1590 refSeqComposite,1602 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 utr evaSnp4,463 evaSnp4,787 evaSnp5,463 evaSnp5,787 transMapV5,164 v ensGene,185 v3.1 augustusGene,7 v4 transMapEnsemblV5,664 transMapEstV5,633 transMapRefSeqV5,633 transMapRnaV5,633 v5 transMapV5,2 transMapV5,739 valid est,211 intronEst,292 mrna,157 xenoMrna,232 validate refGene,191 refSeqComposite,825 xenoRefGene,151 validation genscan,107 value est,282 intronEst,363 mrna,228 xenoMrna,303 variant evaSnp4,10 evaSnp4,87 evaSnp4,94 evaSnp4,183 evaSnp4,192 evaSnp4,223 evaSnp4,236 evaSnp4,261 evaSnp4,315 evaSnp4,377 evaSnp4,433 evaSnp4,447 evaSnp4,532 evaSnp4,582 evaSnp4,709 evaSnp4,813 evaSnp4,844 evaSnp4,883 evaSnp4,1146 evaSnp4,1240 evaSnp5,10 evaSnp5,87 evaSnp5,94 evaSnp5,183 evaSnp5,192 evaSnp5,223 evaSnp5,236 evaSnp5,261 evaSnp5,315 evaSnp5,377 evaSnp5,433 evaSnp5,447 evaSnp5,532 evaSnp5,582 evaSnp5,709 evaSnp5,813 evaSnp5,844 evaSnp5,883 evaSnp5,1146 evaSnp5,1240 uniprot,2026 variants evaSnp4,7 evaSnp4,25 evaSnp4,54 evaSnp4,61 evaSnp4,126 evaSnp4,154 evaSnp4,264 evaSnp4,418 evaSnp4,450 evaSnp4,454 evaSnp4,457 evaSnp4,464 evaSnp4,468 evaSnp4,472 evaSnp4,670 evaSnp4,705 evaSnp4,745 evaSnp4,759 evaSnp4,763 evaSnp4,779 evaSnp4,788 evaSnp4,796 evaSnp4,855 evaSnp5,7 evaSnp5,25 evaSnp5,54 evaSnp5,61 evaSnp5,126 evaSnp5,154 evaSnp5,264 evaSnp5,418 evaSnp5,450 evaSnp5,454 evaSnp5,457 evaSnp5,464 evaSnp5,468 evaSnp5,472 evaSnp5,670 evaSnp5,705 evaSnp5,745 evaSnp5,759 evaSnp5,763 evaSnp5,779 evaSnp5,788 evaSnp5,796 evaSnp5,855 refSeqComposite,947 uniprot,357 uniprot,415 uniprot,425 uniprot,533 uniprot,943 uniprot,2042 variation evaSnp4,14 evaSnp4,35 evaSnp4,684 evaSnp4,1135 evaSnp4,1184 evaSnp4,1191 evaSnp5,14 evaSnp5,35 evaSnp5,684 evaSnp5,1135 evaSnp5,1184 evaSnp5,1191 microsat,7 nestedRepeats,11 refSeqComposite,1074 rmsk,6 simpleRepeat,8 uniprot,438 windowmaskerSdust,9 variations animalQtl,39 animalQtl,158 variety gc5BaseBw,45 various animalQtl,66 uniprot,50 vb chainHg19,1025 chainNetHg19,1028 netHg19,1025 vector est,467 intronEst,548 venkataraman evaSnp4,1178 evaSnp5,1178 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 refSeqComposite,1131 refSeqComposite,1565 rmsk,58 transMapEnsemblV5,8 transMapEstV5,6 transMapRefSeqV5,7 transMapRnaV5,7 transMapV5,5 uniprot,1254 uniprot,1297 uniprot,1576 uniprot,1593 versions augustusGene,279 ensGene,133 nestedRepeats,251 nestedRepeats,267 refSeqComposite,1337 refSeqComposite,1691 uniprot,1655 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 transMapEnsemblV5,31 transMapEnsemblV5,158 transMapEnsemblV5,191 transMapEstV5,29 transMapEstV5,127 transMapEstV5,160 transMapRefSeqV5,29 transMapRefSeqV5,127 transMapRefSeqV5,160 transMapRnaV5,29 transMapRnaV5,127 transMapRnaV5,160 transMapV5,28 transMapV5,113 transMapV5,233 transMapV5,266 xenoMrna,18 vertebrates augustusGene,209 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very est,673 intronEst,754 uniprot,977 uniprot,1185 uniprot,1399 uniprot,1402 via transMapEnsemblV5,326 transMapEstV5,295 transMapRefSeqV5,295 transMapRnaV5,295 transMapV5,401 uniprot,1293 view chainHg19,454 chainNetHg19,457 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 est,207 intronEst,288 mrna,153 netHg19,454 xenoMrna,228 viewed est,635 gold,76 intronEst,716 viewing evaSnp4,73 evaSnp5,73 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 evaSnp4,147 evaSnp5,147 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 uniprot,147 visit refGene,45 refSeqComposite,103 w animalQtl,293 chainHg19,1027 chainHg19,1047 chainHg19,1095 chainNetHg19,1030 chainNetHg19,1050 chainNetHg19,1098 gold,148 netHg19,1027 netHg19,1047 netHg19,1095 waack augustusGene,318 wageningen animalQtl,238 want uniprot,690 was augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 chainHg19,646 chainHg19,664 chainHg19,785 chainHg19,830 chainHg19,838 chainHg19,858 chainHg19,870 chainHg19,895 chainHg19,913 chainHg19,948 chainNetHg19,649 chainNetHg19,667 chainNetHg19,788 chainNetHg19,833 chainNetHg19,841 chainNetHg19,861 chainNetHg19,873 chainNetHg19,898 chainNetHg19,916 chainNetHg19,951 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 est,695 est,724 evaSnp4,414 evaSnp4,929 evaSnp4,1130 evaSnp5,414 evaSnp5,929 evaSnp5,1130 intronEst,776 intronEst,808 microsat,108 mrna,411 mrna,441 netHg19,646 netHg19,664 netHg19,785 netHg19,830 netHg19,838 netHg19,858 netHg19,870 netHg19,895 netHg19,913 netHg19,948 refGene,291 refGene,320 refSeqComposite,499 refSeqComposite,1259 refSeqComposite,1709 rmsk,12 rmsk,262 simpleRepeat,68 transMapEnsemblV5,220 transMapEnsemblV5,237 transMapEnsemblV5,282 transMapEnsemblV5,314 transMapEnsemblV5,676 transMapEstV5,189 transMapEstV5,206 transMapEstV5,251 transMapEstV5,283 transMapEstV5,645 transMapRefSeqV5,189 transMapRefSeqV5,206 transMapRefSeqV5,251 transMapRefSeqV5,283 transMapRefSeqV5,645 transMapRnaV5,189 transMapRnaV5,206 transMapRnaV5,251 transMapRnaV5,283 transMapRnaV5,645 transMapV5,295 transMapV5,312 transMapV5,357 transMapV5,389 transMapV5,751 ucscToRefSeq,42 uniprot,799 uniprot,815 uniprot,1354 uniprot,1625 uniprot,1941 windowmaskerSdust,52 windowmaskerSdust,78 xenoMrna,485 xenoMrna,516 xenoRefGene,251 xenoRefGene,280 way transMapEnsemblV5,587 transMapEstV5,556 transMapRefSeqV5,556 transMapRnaV5,556 transMapV5,662 uniprot,1459 ways gc5BaseBw,47 refSeqComposite,1298 we ensGene,146 refSeqComposite,76 rmsk,122 uniprot,1224 uniprot,1453 uniprot,1859 webb chainHg19,927 chainHg19,964 chainNetHg19,930 chainNetHg19,967 netHg19,927 netHg19,964 weekly refGene,43 xenoRefGene,40 well augustusGene,78 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 est,539 est,562 evaSnp4,1154 evaSnp5,1154 genscan,36 intronEst,620 intronEst,643 rmsk,54 were animalQtl,118 animalQtl,248 augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 chainHg19,575 chainHg19,583 chainHg19,590 chainHg19,597 chainHg19,609 chainHg19,682 chainHg19,756 chainHg19,936 chainHg19,980 chainHg19,994 chainNetHg19,578 chainNetHg19,586 chainNetHg19,593 chainNetHg19,600 chainNetHg19,612 chainNetHg19,685 chainNetHg19,759 chainNetHg19,939 chainNetHg19,983 chainNetHg19,997 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 ensGene,13 est,589 est,647 est,719 evaSnp4,390 evaSnp4,679 evaSnp4,699 evaSnp4,723 evaSnp4,743 evaSnp4,746 evaSnp4,809 evaSnp4,818 evaSnp4,829 evaSnp4,839 evaSnp4,1141 evaSnp5,390 evaSnp5,679 evaSnp5,699 evaSnp5,723 evaSnp5,743 evaSnp5,746 evaSnp5,809 evaSnp5,818 evaSnp5,829 evaSnp5,839 evaSnp5,1141 gc5BaseBw,79 intronEst,670 intronEst,728 mrna,387 mrna,435 netHg19,575 netHg19,583 netHg19,590 netHg19,597 netHg19,609 netHg19,682 netHg19,756 netHg19,936 netHg19,980 netHg19,994 refGene,258 refGene,274 refGene,315 refSeqComposite,100 refSeqComposite,248 refSeqComposite,357 refSeqComposite,419 refSeqComposite,1148 refSeqComposite,1161 refSeqComposite,1226 refSeqComposite,1242 refSeqComposite,1283 transMapEnsemblV5,155 transMapEnsemblV5,185 transMapEnsemblV5,211 transMapEnsemblV5,242 transMapEnsemblV5,248 transMapEnsemblV5,262 transMapEnsemblV5,348 transMapEnsemblV5,379 transMapEnsemblV5,392 transMapEstV5,124 transMapEstV5,154 transMapEstV5,180 transMapEstV5,211 transMapEstV5,217 transMapEstV5,231 transMapEstV5,317 transMapEstV5,348 transMapEstV5,361 transMapRefSeqV5,124 transMapRefSeqV5,154 transMapRefSeqV5,180 transMapRefSeqV5,211 transMapRefSeqV5,217 transMapRefSeqV5,231 transMapRefSeqV5,317 transMapRefSeqV5,348 transMapRefSeqV5,361 transMapRnaV5,124 transMapRnaV5,154 transMapRnaV5,180 transMapRnaV5,211 transMapRnaV5,217 transMapRnaV5,231 transMapRnaV5,317 transMapRnaV5,348 transMapRnaV5,361 transMapV5,115 transMapV5,128 transMapV5,230 transMapV5,260 transMapV5,286 transMapV5,317 transMapV5,323 transMapV5,337 transMapV5,423 transMapV5,454 transMapV5,467 ucscToRefSeq,29 uniprot,782 uniprot,794 uniprot,930 uniprot,937 uniprot,1386 uniprot,1471 uniprot,1505 uniprot,1515 xenoMrna,461 xenoMrna,510 xenoRefGene,218 xenoRefGene,234 xenoRefGene,275 wget uniprot,1903 uniprot,1913 wheeler est,779 intronEst,863 mrna,496 xenoMrna,571 when augustusGene,188 augustusGene,238 chainHg19,405 chainNetHg19,408 est,143 est,153 est,680 evaSnp4,72 evaSnp4,148 evaSnp4,158 evaSnp4,321 evaSnp4,395 evaSnp4,725 evaSnp4,737 evaSnp5,72 evaSnp5,148 evaSnp5,158 evaSnp5,321 evaSnp5,395 evaSnp5,725 evaSnp5,737 intronEst,33 intronEst,224 intronEst,234 intronEst,761 mrna,89 mrna,99 mrna,396 netHg19,405 refGene,276 refSeqComposite,1088 refSeqComposite,1244 transMapEnsemblV5,465 transMapEstV5,434 transMapRefSeqV5,434 transMapRnaV5,434 transMapV5,540 uniprot,951 uniprot,1202 uniprot,1632 xenoMrna,164 xenoMrna,174 xenoMrna,470 xenoRefGene,236 where chainHg19,191 chainNetHg19,194 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,94 netHg19,191 transMapEnsemblV5,270 transMapEnsemblV5,371 transMapEnsemblV5,420 transMapEnsemblV5,508 transMapEstV5,239 transMapEstV5,340 transMapEstV5,389 transMapEstV5,477 transMapRefSeqV5,239 transMapRefSeqV5,340 transMapRefSeqV5,389 transMapRefSeqV5,477 transMapRnaV5,239 transMapRnaV5,340 transMapRnaV5,389 transMapRnaV5,477 transMapV5,345 transMapV5,446 transMapV5,495 transMapV5,583 uniprot,1192 whether chainHg19,854 chainNetHg19,857 netHg19,854 which augustusGene,159 augustusGene,227 chainHg19,322 chainHg19,613 chainHg19,819 chainNetHg19,325 chainNetHg19,616 chainNetHg19,822 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 est,103 est,230 est,496 est,521 est,667 evaSnp4,291 evaSnp4,308 evaSnp4,325 evaSnp4,340 evaSnp4,864 evaSnp4,1070 evaSnp5,291 evaSnp5,308 evaSnp5,325 evaSnp5,340 evaSnp5,864 evaSnp5,1070 intronEst,184 intronEst,311 intronEst,577 intronEst,602 intronEst,748 mrna,176 nestedRepeats,31 nestedRepeats,87 netHg19,322 netHg19,613 netHg19,819 refSeqComposite,46 refSeqComposite,261 refSeqComposite,1478 refSeqComposite,1506 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 transMapEnsemblV5,614 transMapEstV5,583 transMapRefSeqV5,583 transMapRnaV5,583 transMapV5,144 transMapV5,689 uniprot,158 uniprot,1380 uniprot,1768 xenoMrna,251 while chainHg19,214 chainNetHg19,217 netHg19,214 white gap,104 whole chainHg19,462 chainNetHg19,465 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 evaSnp4,1060 evaSnp5,1060 gold,149 netHg19,462 refSeqComposite,1494 transMapEnsemblV5,604 transMapEstV5,573 transMapRefSeqV5,573 transMapRnaV5,573 transMapV5,679 whose refSeqComposite,220 refSeqComposite,349 refSeqComposite,963 transMapEnsemblV5,217 transMapEstV5,186 transMapRefSeqV5,186 transMapRnaV5,186 transMapV5,292 xenoMrna,78 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 evaSnp4,83 evaSnp4,91 evaSnp4,118 evaSnp5,83 evaSnp5,91 evaSnp5,118 wildcards est,268 intronEst,349 mrna,214 xenoMrna,289 will est,301 est,319 est,348 est,365 evaSnp4,341 evaSnp5,341 intronEst,382 intronEst,400 intronEst,429 intronEst,446 mrna,247 mrna,265 mrna,294 mrna,311 rmsk,277 rmsk,283 transMapEnsemblV5,61 uniprot,537 uniprot,665 uniprot,754 uniprot,1142 uniprot,1162 xenoMrna,322 xenoMrna,340 xenoMrna,369 xenoMrna,386 window evaSnp4,157 evaSnp4,160 evaSnp5,157 evaSnp5,160 window-based windowmaskerSdust,101 windowmasker windowmaskerSdust,7 windowmaskerSdust,21 windowmaskerSdust,23 windowmaskerSdust,51 windowmaskerSdust,58 windowmaskerSdust,65 windowmaskerSdust,100 windowmaskersdust windowmaskerSdust,83 windows gc5BaseBw,7 gc5BaseBw,28 wisconsin animalQtl,229 wish est,232 intronEst,313 mrna,178 refGene,245 refSeqComposite,172 xenoMrna,253 xenoRefGene,205 with animalQtl,218 animalQtl,343 animalQtl,419 augustusGene,127 augustusGene,322 chainHg19,42 chainHg19,205 chainHg19,216 chainHg19,585 chainHg19,697 chainHg19,773 chainHg19,897 chainHg19,929 chainHg19,961 chainHg19,1098 chainNetHg19,45 chainNetHg19,208 chainNetHg19,219 chainNetHg19,588 chainNetHg19,700 chainNetHg19,776 chainNetHg19,900 chainNetHg19,932 chainNetHg19,964 chainNetHg19,1101 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 est,102 est,498 est,636 est,672 est,715 evaSnp4,219 evaSnp4,990 evaSnp5,219 evaSnp5,990 gap,52 gc5BaseBw,35 gold,51 gold,141 intronEst,183 intronEst,579 intronEst,717 intronEst,753 intronEst,796 microsat,69 microsat,76 mrna,431 nestedRepeats,133 netHg19,42 netHg19,205 netHg19,216 netHg19,585 netHg19,697 netHg19,773 netHg19,897 netHg19,929 netHg19,961 netHg19,1098 refGene,267 refGene,311 refSeqComposite,223 refSeqComposite,352 refSeqComposite,488 refSeqComposite,950 refSeqComposite,979 refSeqComposite,1038 refSeqComposite,1065 refSeqComposite,1091 refSeqComposite,1130 refSeqComposite,1235 refSeqComposite,1279 refSeqComposite,1397 rmsk,111 rmsk,225 simpleRepeat,52 transMapEnsemblV5,51 transMapEnsemblV5,182 transMapEnsemblV5,250 transMapEnsemblV5,350 transMapEnsemblV5,352 transMapEnsemblV5,581 transMapEstV5,151 transMapEstV5,219 transMapEstV5,319 transMapEstV5,321 transMapEstV5,550 transMapRefSeqV5,151 transMapRefSeqV5,219 transMapRefSeqV5,319 transMapRefSeqV5,321 transMapRefSeqV5,550 transMapRnaV5,151 transMapRnaV5,219 transMapRnaV5,319 transMapRnaV5,321 transMapRnaV5,550 transMapV5,257 transMapV5,325 transMapV5,425 transMapV5,427 transMapV5,656 uniprot,183 uniprot,258 uniprot,280 uniprot,458 uniprot,639 uniprot,716 uniprot,788 uniprot,946 uniprot,1475 uniprot,1481 uniprot,1496 uniprot,1501 uniprot,1718 uniprot,1948 windowmaskerSdust,54 xenoMrna,506 xenoRefGene,227 xenoRefGene,271 within animalQtl,52 animalQtl,114 est,136 est,549 est,704 evaSnp4,1108 evaSnp5,1108 gold,116 intronEst,217 intronEst,630 intronEst,785 mrna,82 mrna,420 refGene,122 refGene,300 refSeqComposite,721 refSeqComposite,1268 simpleRepeat,37 transMapEnsemblV5,652 transMapEstV5,621 transMapRefSeqV5,621 transMapRnaV5,621 transMapV5,727 uniprot,1109 uniprot,1313 uniprot,1345 uniprot,1488 uniprot,1806 xenoMrna,157 xenoMrna,495 xenoRefGene,82 xenoRefGene,260 without uniprot,139 wj chainHg19,1041 chainHg19,1083 chainNetHg19,1044 chainNetHg19,1086 est,798 evaSnp4,1235 evaSnp5,1235 intronEst,882 mrna,515 netHg19,1041 netHg19,1083 refGene,341 refSeqComposite,1728 xenoMrna,590 xenoRefGene,301 wm windowmaskerSdust,1 wm_counts windowmaskerSdust,64 windowmaskerSdust,67 wonhee animalQtl,210 words uniprot,1201 work animalQtl,254 world animalQtl,351 worldwide est,741 intronEst,825 mrna,458 refGene,331 refSeqComposite,1718 transMapEnsemblV5,698 transMapEstV5,667 transMapRefSeqV5,667 transMapRnaV5,667 transMapV5,773 xenoMrna,533 xenoRefGene,291 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 ensGene,147 evaSnp4,907 evaSnp5,907 wrench refSeqComposite,749 written genscan,19 microsat,109 simpleRepeat,69 wu animalQtl,225 animalQtl,368 www.repeatmasker.org nestedRepeats,333 rmsk,356 x uniprot,1923 xiao-lin animalQtl,224 xl animalQtl,369 xm refSeqComposite,353 xm_ ncbiRefSeq,10 ncbiRefSeqOther,10 ncbiRefSeqPredicted,8 xml uniprot,1510 xr refSeqComposite,355 xr_ ncbiRefSeq,12 ncbiRefSeqOther,11 ncbiRefSeqPredicted,10 y ensGene,177 yap chainHg19,1024 chainNetHg19,1027 netHg19,1024 years uniprot,933 yet evaSnp4,676 evaSnp5,676 refSeqComposite,672 refSeqComposite,697 yip uniprot,2010 yl uniprot,2011 you est,231 intronEst,312 mrna,177 refGene,244 refSeqComposite,171 refSeqComposite,1347 refSeqComposite,1455 refSeqComposite,1539 refSeqComposite,1559 refSeqComposite,1629 rmsk,115 uniprot,655 uniprot,689 uniprot,1443 xenoMrna,252 xenoRefGene,204 younger nestedRepeats,94 your evaSnp4,1085 evaSnp5,1085 refSeqComposite,1521 refSeqComposite,1634 transMapEnsemblV5,629 transMapEstV5,598 transMapRefSeqV5,598 transMapRnaV5,598 transMapV5,704 uniprot,1783 yp refSeqComposite,228 refSeqComposite,231 refSeqComposite,241 yp_ ncbiRefSeq,14 ncbiRefSeqCurated,12 ncbiRefSeqOther,14 z chainHg19,1087 chainNetHg19,1090 netHg19,1087 zebrafish augustusGene,202 augustusGene,278 zhang chainHg19,925 chainHg19,1086 chainNetHg19,928 chainNetHg19,1089 netHg19,925 netHg19,1086 zheng chainHg19,924 chainNetHg19,927 netHg19,924 zhi-liang animalQtl,186 zhu transMapEnsemblV5,784 transMapEstV5,753 transMapRefSeqV5,753 transMapRnaV5,753 transMapV5,859 zinc uniprot,326 zl animalQtl,289 animalQtl,321 animalQtl,365 animalQtl,403 zoom evaSnp4,70 evaSnp5,70 zoomed-in genscan,103 zweig evaSnp4,1230 evaSnp5,1230