0 nestedRepeats,237 transMapEnsemblV5,669 transMapEstV5,638 transMapRefSeqV5,638 transMapRnaV5,638 transMapV5,744 uniprot,1822 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1 refGene,301 refSeqComposite,1269 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.5 augustusGene,138 est,705 intronEst,786 mrna,421 transMapEnsemblV5,224 transMapEnsemblV5,358 transMapEstV5,193 transMapEstV5,327 transMapRefSeqV5,193 transMapRefSeqV5,327 transMapRnaV5,193 transMapRnaV5,327 transMapV5,299 transMapV5,433 xenoRefGene,261 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 est,665 gap,152 gap,155 gap,156 gap,180 gap,181 intronEst,746 transMapV5,109 1 HLTOGAannotvHg38v1,239 augustusGene,310 chainCavPor3,392 chainCavPor3,523 chainCavPor3,715 chainCavPor3,1114 chainHg19,385 chainHg19,516 chainHg19,706 chainHg19,1105 chainMm10,385 chainMm10,516 chainMm10,706 chainMm10,1105 chainMm39,385 chainMm39,516 chainMm39,706 chainMm39,1105 chainMonDom5,385 chainMonDom5,516 chainMonDom5,706 chainMonDom5,1105 chainNetCavPor3,395 chainNetCavPor3,526 chainNetCavPor3,718 chainNetCavPor3,1117 chainNetHg19,387 chainNetHg19,518 chainNetHg19,708 chainNetHg19,1107 chainNetMm10,387 chainNetMm10,518 chainNetMm10,708 chainNetMm10,1107 chainNetMm39,388 chainNetMm39,519 chainNetMm39,709 chainNetMm39,1108 chainNetMonDom5,388 chainNetMonDom5,519 chainNetMonDom5,709 chainNetMonDom5,1108 chainNetRn6,391 chainNetRn6,522 chainNetRn6,712 chainNetRn6,1111 chainRn6,388 chainRn6,519 chainRn6,709 chainRn6,1108 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 ensGene,200 ensGene,202 est,788 gap,151 genscan,227 intronEst,872 mrna,505 netCavPor3,392 netCavPor3,523 netCavPor3,715 netCavPor3,1114 netHg19,385 netHg19,516 netHg19,706 netHg19,1105 netMm10,385 netMm10,516 netMm10,706 netMm10,1105 netMm39,385 netMm39,516 netMm39,706 netMm39,1105 netMonDom5,385 netMonDom5,516 netMonDom5,706 netMonDom5,1105 netRn6,388 netRn6,519 netRn6,709 netRn6,1108 refGene,425 refSeqComposite,1812 tRNAs,93 tRNAs,462 transMapEnsemblV5,778 transMapEstV5,747 transMapRefSeqV5,747 transMapRnaV5,747 transMapV5,853 uniprot,1110 uniprot,1314 uniprot,1346 uniprot,1490 uniprot,1927 xenoMrna,496 xenoMrna,580 xenoRefGene,384 1.0 transMapEnsemblV5,366 transMapEstV5,335 transMapRefSeqV5,335 transMapRnaV5,335 transMapV5,441 10 geneid,192 uniprot,1928 100 augustusGene,134 chainCavPor3,1082 chainHg19,1073 chainMm10,1073 chainMm39,1073 chainMonDom5,1073 chainNetCavPor3,1085 chainNetHg19,1075 chainNetMm10,1075 chainNetMm39,1076 chainNetMonDom5,1076 chainNetRn6,1079 chainRn6,1076 microsat,70 nestedRepeats,230 netCavPor3,1082 netHg19,1073 netMm10,1073 netMm39,1073 netMonDom5,1073 netRn6,1076 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainCavPor3,754 chainHg19,745 chainMm10,745 chainMm39,745 chainMonDom5,745 chainNetCavPor3,757 chainNetHg19,747 chainNetMm10,747 chainNetMm39,748 chainNetMonDom5,748 chainNetRn6,751 chainRn6,748 nestedRepeats,238 netCavPor3,754 netHg19,745 netMm10,745 netMm39,745 netMonDom5,745 netRn6,748 1000-2000 augustusGene,161 1000000 transMapEnsemblV5,671 transMapEstV5,640 transMapRefSeqV5,640 transMapRnaV5,640 transMapV5,746 uniprot,1824 103-7 chainCavPor3,1115 chainHg19,1106 chainMm10,1106 chainMm39,1106 chainMonDom5,1106 chainNetCavPor3,1118 chainNetHg19,1108 chainNetMm10,1108 chainNetMm39,1109 chainNetMonDom5,1109 chainNetRn6,1112 chainRn6,1109 netCavPor3,1115 netHg19,1106 netMm10,1106 netMm39,1106 netMonDom5,1106 netRn6,1109 10607616 nestedRepeats,394 rmsk,417 10779490 geneid,196 10973072 nestedRepeats,361 rmsk,384 11 chainCavPor3,711 chainCavPor3,718 chainHg19,702 chainHg19,709 chainMm10,702 chainMm10,709 chainMm39,702 chainMm39,709 chainMonDom5,702 chainMonDom5,709 chainNetCavPor3,714 chainNetCavPor3,721 chainNetHg19,704 chainNetHg19,711 chainNetMm10,704 chainNetMm10,711 chainNetMm39,705 chainNetMm39,712 chainNetMonDom5,705 chainNetMonDom5,712 chainNetRn6,708 chainNetRn6,715 chainRn6,705 chainRn6,712 netCavPor3,711 netCavPor3,718 netHg19,702 netHg19,709 netMm10,702 netMm10,709 netMm39,702 netMm39,709 netMonDom5,702 netMonDom5,709 netRn6,705 netRn6,712 tRNAs,409 tRNAs,411 tRNAs,505 111 chainCavPor3,713 chainCavPor3,719 chainHg19,704 chainHg19,710 chainMm10,704 chainMm10,710 chainMm39,704 chainMm39,710 chainMonDom5,704 chainMonDom5,710 chainNetCavPor3,716 chainNetCavPor3,722 chainNetHg19,706 chainNetHg19,712 chainNetMm10,706 chainNetMm10,712 chainNetMm39,707 chainNetMm39,713 chainNetMonDom5,707 chainNetMonDom5,713 chainNetRn6,710 chainNetRn6,716 chainRn6,707 chainRn6,713 netCavPor3,713 netCavPor3,719 netHg19,704 netHg19,710 netMm10,704 netMm10,710 netMm39,704 netMm39,710 netMonDom5,704 netMonDom5,710 netRn6,707 netRn6,713 11484-9 chainCavPor3,1084 chainHg19,1075 chainMm10,1075 chainMm39,1075 chainMonDom5,1075 chainNetCavPor3,1087 chainNetHg19,1077 chainNetMm10,1077 chainNetMm39,1078 chainNetMonDom5,1078 chainNetRn6,1081 chainRn6,1078 netCavPor3,1084 netHg19,1075 netMm10,1075 netMm39,1075 netMonDom5,1075 netRn6,1078 115-26 chainCavPor3,1046 chainHg19,1037 chainMm10,1037 chainMm39,1037 chainMonDom5,1037 chainNetCavPor3,1049 chainNetHg19,1039 chainNetMm10,1039 chainNetMm39,1040 chainNetMonDom5,1040 chainNetRn6,1043 chainRn6,1040 netCavPor3,1046 netHg19,1037 netMm10,1037 netMm39,1037 netMonDom5,1037 netRn6,1040 11752248 ensGene,205 117900 chainCavPor3,735 chainCavPor3,747 chainHg19,726 chainHg19,738 chainMm10,726 chainMm10,738 chainMm39,726 chainMm39,738 chainMonDom5,726 chainMonDom5,738 chainNetCavPor3,738 chainNetCavPor3,750 chainNetHg19,728 chainNetHg19,740 chainNetMm10,728 chainNetMm10,740 chainNetMm39,729 chainNetMm39,741 chainNetMonDom5,729 chainNetMonDom5,741 chainNetRn6,732 chainNetRn6,744 chainRn6,729 chainRn6,741 netCavPor3,735 netCavPor3,747 netHg19,726 netHg19,738 netMm10,726 netMm10,738 netMm39,726 netMm39,738 netMonDom5,726 netMonDom5,738 netRn6,729 netRn6,741 118300 chainCavPor3,759 chainHg19,750 chainMm10,750 chainMm39,750 chainMonDom5,750 chainNetCavPor3,762 chainNetHg19,752 chainNetMm10,752 chainNetMm39,753 chainNetMonDom5,753 chainNetRn6,756 chainRn6,753 netCavPor3,759 netHg19,750 netMm10,750 netMm39,750 netMonDom5,750 netRn6,753 11928468 chainCavPor3,1048 chainHg19,1039 chainMm10,1039 chainMm39,1039 chainMonDom5,1039 chainNetCavPor3,1051 chainNetHg19,1041 chainNetMm10,1041 chainNetMm39,1042 chainNetMonDom5,1042 chainNetRn6,1045 chainRn6,1042 netCavPor3,1048 netHg19,1039 netMm10,1039 netMm39,1039 netMonDom5,1039 netRn6,1042 11932250 est,812 intronEst,896 mrna,529 refGene,355 refSeqComposite,1742 xenoMrna,604 xenoRefGene,314 12 est,808 intronEst,892 mrna,525 refGene,351 refSeqComposite,1738 transMapEnsemblV5,748 transMapEnsemblV5,814 transMapEstV5,717 transMapEstV5,783 transMapRefSeqV5,717 transMapRefSeqV5,783 transMapRnaV5,717 transMapRnaV5,783 transMapV5,823 transMapV5,889 xenoMrna,600 xenoRefGene,310 12111 chainCavPor3,721 chainHg19,712 chainMm10,712 chainMm39,712 chainMonDom5,712 chainNetCavPor3,724 chainNetHg19,714 chainNetMm10,714 chainNetMm39,715 chainNetMonDom5,715 chainNetRn6,718 chainRn6,715 netCavPor3,721 netHg19,712 netMm10,712 netMm39,712 netMonDom5,712 netRn6,715 1247-56 tRNAs,508 12529312 chainCavPor3,1117 chainHg19,1108 chainMm10,1108 chainMm39,1108 chainMonDom5,1108 chainNetCavPor3,1120 chainNetHg19,1110 chainNetMm10,1110 chainNetMm39,1111 chainNetMonDom5,1111 chainNetRn6,1114 chainRn6,1111 netCavPor3,1117 netHg19,1108 netMm10,1108 netMm39,1108 netMonDom5,1108 netRn6,1111 127-163 genscan,206 13 chainCavPor3,1113 chainHg19,1104 chainMm10,1104 chainMm39,1104 chainMonDom5,1104 chainNetCavPor3,1116 chainNetHg19,1106 chainNetMm10,1106 chainNetMm39,1107 chainNetMonDom5,1107 chainNetRn6,1110 chainRn6,1107 netCavPor3,1113 netHg19,1104 netMm10,1104 netMm39,1104 netMonDom5,1104 netRn6,1107 1300 chainCavPor3,755 chainHg19,746 chainMm10,746 chainMm39,746 chainMonDom5,746 chainNetCavPor3,758 chainNetHg19,748 chainNetMm10,748 chainNetMm39,749 chainNetMonDom5,749 chainNetRn6,752 chainRn6,749 netCavPor3,755 netHg19,746 netMm10,746 netMm39,746 netMonDom5,746 netRn6,749 14500911 chainCavPor3,1086 chainHg19,1077 chainMm10,1077 chainMm39,1077 chainMonDom5,1077 chainNetCavPor3,1089 chainNetHg19,1079 chainNetMm10,1079 chainNetMm39,1080 chainNetMonDom5,1080 chainNetRn6,1083 chainRn6,1080 netCavPor3,1086 netHg19,1077 netMm10,1077 netMm39,1077 netMonDom5,1077 netRn6,1080 14534192 augustusGene,340 14681350 est,794 intronEst,878 mrna,511 xenoMrna,586 15 microsat,30 microsat,79 microsat,130 refGene,273 refSeqComposite,1241 simpleRepeat,90 tRNAs,95 xenoRefGene,233 15108278 uniprot,2051 152111 chainCavPor3,724 chainHg19,715 chainMm10,715 chainMm39,715 chainMonDom5,715 chainNetCavPor3,727 chainNetHg19,717 chainNetMm10,717 chainNetMm39,718 chainNetMonDom5,718 chainNetRn6,721 chainRn6,718 netCavPor3,724 netHg19,715 netMm10,715 netMm39,715 netMonDom5,715 netRn6,718 15608248 refGene,431 refSeqComposite,1818 xenoRefGene,390 16 nestedRepeats,357 rmsk,380 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 transMapEnsemblV5,747 transMapEstV5,716 transMapRefSeqV5,716 transMapRnaV5,716 transMapV5,822 1763-73 transMapEnsemblV5,749 transMapEstV5,718 transMapRefSeqV5,718 transMapRnaV5,718 transMapV5,824 17989246 transMapEnsemblV5,751 transMapEstV5,720 transMapRefSeqV5,720 transMapRnaV5,720 transMapV5,826 18085818 transMapEnsemblV5,817 transMapEstV5,786 transMapRefSeqV5,786 transMapRnaV5,786 transMapV5,892 18218656 augustusGene,315 transMapEnsemblV5,783 transMapEstV5,752 transMapRefSeqV5,752 transMapRnaV5,752 transMapV5,858 18428791 geneid,177 1870126 tRNAs,439 18984615 tRNAs,391 19 augustusGene,335 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1988 tRNAs,350 1990 blastHg18KG,171 1991 tRNAs,432 1994 tRNAs,407 tRNAs,503 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 genscan,149 genscan,223 tRNAs,460 1998 genscan,167 genscan,204 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainCavPor3,426 chainCavPor3,431 chainCavPor3,716 chainHg19,419 chainHg19,424 chainHg19,707 chainMm10,419 chainMm10,424 chainMm10,707 chainMm39,419 chainMm39,424 chainMm39,707 chainMonDom5,419 chainMonDom5,424 chainMonDom5,707 chainNetCavPor3,429 chainNetCavPor3,434 chainNetCavPor3,719 chainNetHg19,421 chainNetHg19,426 chainNetHg19,709 chainNetMm10,421 chainNetMm10,426 chainNetMm10,709 chainNetMm39,422 chainNetMm39,427 chainNetMm39,710 chainNetMonDom5,422 chainNetMonDom5,427 chainNetMonDom5,710 chainNetRn6,425 chainNetRn6,430 chainNetRn6,713 chainRn6,422 chainRn6,427 chainRn6,710 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 ctgPos2,43 microsat,66 microsat,132 netCavPor3,426 netCavPor3,431 netCavPor3,716 netHg19,419 netHg19,424 netHg19,707 netMm10,419 netMm10,424 netMm10,707 netMm39,419 netMm39,424 netMm39,707 netMonDom5,419 netMonDom5,424 netMonDom5,707 netRn6,422 netRn6,427 netRn6,710 simpleRepeat,92 uniprot,1121 uniprot,1331 2-3 uniprot,1572 2.0 HLTOGAannotvHg38v1,103 ctgPos2,22 20 chainCavPor3,1083 chainHg19,1074 chainMm10,1074 chainMm39,1074 chainMonDom5,1074 chainNetCavPor3,1086 chainNetHg19,1076 chainNetMm10,1076 chainNetMm39,1077 chainNetMonDom5,1077 chainNetRn6,1080 chainRn6,1077 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netCavPor3,1083 netHg19,1074 netMm10,1074 netMm39,1074 netMonDom5,1074 netRn6,1077 tRNAs,123 transMapEnsemblV5,374 transMapEstV5,343 transMapRefSeqV5,343 transMapRnaV5,343 transMapV5,449 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 geneid,190 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2002 chainCavPor3,1045 chainHg19,1036 chainMm10,1036 chainMm39,1036 chainMonDom5,1036 chainNetCavPor3,1048 chainNetHg19,1038 chainNetMm10,1038 chainNetMm39,1039 chainNetMonDom5,1039 chainNetRn6,1042 chainRn6,1039 ensGene,47 ensGene,198 est,806 intronEst,890 mrna,523 netCavPor3,1045 netHg19,1036 netMm10,1036 netMm39,1036 netMonDom5,1036 netRn6,1039 refGene,349 refSeqComposite,1736 xenoMrna,598 xenoRefGene,308 2003 augustusGene,333 chainCavPor3,1079 chainCavPor3,1111 chainHg19,1070 chainHg19,1102 chainMm10,1070 chainMm10,1102 chainMm39,1070 chainMm39,1102 chainMonDom5,1070 chainMonDom5,1102 chainNetCavPor3,1082 chainNetCavPor3,1114 chainNetHg19,1072 chainNetHg19,1104 chainNetMm10,1072 chainNetMm10,1104 chainNetMm39,1073 chainNetMm39,1105 chainNetMonDom5,1073 chainNetMonDom5,1105 chainNetRn6,1076 chainNetRn6,1108 chainRn6,1073 chainRn6,1105 netCavPor3,1079 netCavPor3,1111 netHg19,1070 netHg19,1102 netMm10,1070 netMm10,1102 netMm39,1070 netMm39,1102 netMonDom5,1070 netMonDom5,1102 netRn6,1073 netRn6,1105 2004 est,786 intronEst,870 mrna,503 uniprot,2045 xenoMrna,578 2005 refGene,423 refSeqComposite,1810 xenoRefGene,382 2006 chainMonDom5,5 chainMonDom5,67 chainMonDom5,301 chainNetMonDom5,6 chainNetMonDom5,70 chainNetMonDom5,304 chainNetMonDom5Viewchain,4 chainNetMonDom5Viewnet,4 netMonDom5,5 netMonDom5,67 netMonDom5,301 2007 chainCavPor3,1018 chainHg19,1009 chainMm10,1009 chainMm39,1009 chainMonDom5,1009 chainNetCavPor3,1021 chainNetHg19,1011 chainNetMm10,1011 chainNetMm39,1012 chainNetMonDom5,1012 chainNetRn6,1015 chainRn6,1012 geneid,170 netCavPor3,1018 netHg19,1009 netMm10,1009 netMm39,1009 netMonDom5,1009 netRn6,1012 transMapEnsemblV5,745 transMapEnsemblV5,811 transMapEstV5,714 transMapEstV5,780 transMapRefSeqV5,714 transMapRefSeqV5,780 transMapRnaV5,714 transMapRnaV5,780 transMapV5,820 transMapV5,886 2008 augustusGene,308 chainCavPor3,7 chainCavPor3,70 chainCavPor3,308 chainNetCavPor3,8 chainNetCavPor3,73 chainNetCavPor3,311 chainNetCavPor3Viewchain,5 chainNetCavPor3Viewnet,5 netCavPor3,7 netCavPor3,70 netCavPor3,308 transMapEnsemblV5,776 transMapEstV5,745 transMapRefSeqV5,745 transMapRnaV5,745 transMapV5,851 2009 chainHg19,5 chainHg19,67 chainHg19,301 chainNetHg19,5 chainNetHg19,69 chainNetHg19,303 chainNetHg19Viewchain,4 chainNetHg19Viewnet,4 ctgPos2,20 netHg19,5 netHg19,67 netHg19,301 tRNAs,384 2011 chainMm10,5 chainMm10,67 chainMm10,301 chainNetMm10,5 chainNetMm10,69 chainNetMm10,303 chainNetMm10Viewchain,4 chainNetMm10Viewnet,4 netMm10,5 netMm10,67 netMm10,301 2012 uniprot,2000 2013 est,761 intronEst,845 mrna,478 xenoMrna,553 2014 chainNetRn6,6 chainNetRn6,71 chainNetRn6,306 chainNetRn6Viewchain,4 chainNetRn6Viewnet,4 chainRn6,5 chainRn6,68 chainRn6,303 netRn6,5 netRn6,68 netRn6,303 refGene,390 refSeqComposite,1777 xenoRefGene,349 2020 chainMm39,5 chainMm39,67 chainMm39,301 chainNetMm39,6 chainNetMm39,70 chainNetMm39,304 chainNetMm39Viewchain,4 chainNetMm39Viewnet,4 netMm39,5 netMm39,67 netMm39,301 2022_03 uniprot,1911 2023 HLTOGAannotvHg38v1,365 uniprot,1191 2079-88 tRNAs,412 2111 chainCavPor3,720 chainHg19,711 chainMm10,711 chainMm39,711 chainMonDom5,711 chainNetCavPor3,723 chainNetHg19,713 chainNetMm10,713 chainNetMm39,714 chainNetMonDom5,714 chainNetRn6,717 chainRn6,714 netCavPor3,720 netHg19,711 netMm10,711 netMm39,711 netMonDom5,711 netRn6,714 215 blastHg18KG,174 217900 chainCavPor3,736 chainCavPor3,748 chainHg19,727 chainHg19,739 chainMm10,727 chainMm10,739 chainMm39,727 chainMm39,739 chainMonDom5,727 chainMonDom5,739 chainNetCavPor3,739 chainNetCavPor3,751 chainNetHg19,729 chainNetHg19,741 chainNetMm10,729 chainNetMm10,741 chainNetMm39,730 chainNetMm39,742 chainNetMonDom5,730 chainNetMonDom5,742 chainNetRn6,733 chainNetRn6,745 chainRn6,730 chainRn6,742 netCavPor3,736 netCavPor3,748 netHg19,727 netHg19,739 netMm10,727 netMm10,739 netMm39,727 netMm39,739 netMonDom5,727 netMonDom5,739 netRn6,730 netRn6,742 218300 chainCavPor3,760 chainHg19,751 chainMm10,751 chainMm39,751 chainMonDom5,751 chainNetCavPor3,763 chainNetHg19,753 chainNetMm10,753 chainNetMm39,754 chainNetMonDom5,754 chainNetRn6,757 chainRn6,754 netCavPor3,760 netHg19,751 netMm10,751 netMm39,751 netMonDom5,751 netRn6,754 22 tRNAs,410 tRNAs,506 220 tRNAs,435 22102590 uniprot,2007 225 transMapEnsemblV5,716 transMapEstV5,685 transMapRefSeqV5,685 transMapRnaV5,685 transMapV5,791 22900 chainCavPor3,733 chainCavPor3,745 chainHg19,724 chainHg19,736 chainMm10,724 chainMm10,736 chainMm39,724 chainMm39,736 chainMonDom5,724 chainMonDom5,736 chainNetCavPor3,736 chainNetCavPor3,748 chainNetHg19,726 chainNetHg19,738 chainNetMm10,726 chainNetMm10,738 chainNetMm39,727 chainNetMm39,739 chainNetMonDom5,727 chainNetMonDom5,739 chainNetRn6,730 chainNetRn6,742 chainRn6,727 chainRn6,739 netCavPor3,733 netCavPor3,745 netHg19,724 netHg19,736 netMm10,724 netMm10,736 netMm39,724 netMm39,736 netMonDom5,724 netMonDom5,736 netRn6,727 netRn6,739 23 uniprot,2047 23193287 est,768 intronEst,852 mrna,485 xenoMrna,560 23300 chainCavPor3,757 chainHg19,748 chainMm10,748 chainMm39,748 chainMonDom5,748 chainNetCavPor3,760 chainNetHg19,750 chainNetMm10,750 chainNetMm39,751 chainNetMonDom5,751 chainNetRn6,754 chainRn6,751 netCavPor3,757 netHg19,748 netMm10,748 netMm39,748 netMonDom5,748 netRn6,751 24 augustusGene,311 transMapEnsemblV5,779 transMapEstV5,748 transMapRefSeqV5,748 transMapRnaV5,748 transMapV5,854 24259432 refGene,397 refSeqComposite,1784 xenoRefGene,356 243 geneid,160 geneid,183 25 genscan,225 tRNAs,463 transMapV5,112 xenoMrna,503 xenoRefGene,268 252111 chainCavPor3,725 chainHg19,716 chainMm10,716 chainMm39,716 chainMonDom5,716 chainNetCavPor3,728 chainNetHg19,718 chainNetMm10,718 chainNetMm39,719 chainNetMonDom5,719 chainNetRn6,722 chainRn6,719 netCavPor3,725 netHg19,716 netMm10,716 netMm39,716 netMonDom5,716 netRn6,719 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 268 genscan,226 27 microsat,131 simpleRepeat,91 28 HLTOGAannotvHg38v1,367 2900 chainCavPor3,732 chainCavPor3,744 chainHg19,723 chainHg19,735 chainMm10,723 chainMm10,735 chainMm39,723 chainMm39,735 chainMonDom5,723 chainMonDom5,735 chainNetCavPor3,735 chainNetCavPor3,747 chainNetHg19,725 chainNetHg19,737 chainNetMm10,725 chainNetMm10,737 chainNetMm39,726 chainNetMm39,738 chainNetMonDom5,726 chainNetMonDom5,738 chainNetRn6,729 chainNetRn6,741 chainRn6,726 chainRn6,738 netCavPor3,732 netCavPor3,744 netHg19,723 netHg19,735 netMm10,723 netMm10,735 netMm39,723 netMm39,735 netMonDom5,723 netMonDom5,735 netRn6,726 netRn6,738 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 blastHg18KG,175 chainCavPor3,438 chainCavPor3,717 chainHg19,431 chainHg19,708 chainMm10,431 chainMm10,708 chainMm39,431 chainMm39,708 chainMonDom5,431 chainMonDom5,708 chainNetCavPor3,441 chainNetCavPor3,720 chainNetHg19,433 chainNetHg19,710 chainNetMm10,433 chainNetMm10,710 chainNetMm39,434 chainNetMm39,711 chainNetMonDom5,434 chainNetMonDom5,711 chainNetRn6,437 chainNetRn6,714 chainRn6,434 chainRn6,711 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 ctgPos2,35 est,478 est,531 est,585 gap,154 gap,179 intronEst,112 intronEst,559 intronEst,612 intronEst,666 microsat,68 netCavPor3,438 netCavPor3,717 netHg19,431 netHg19,708 netMm10,431 netMm10,708 netMm39,431 netMm39,708 netMonDom5,431 netMonDom5,708 netRn6,434 netRn6,711 tRNAs,436 transMapEnsemblV5,813 transMapEstV5,782 transMapRefSeqV5,782 transMapRnaV5,782 transMapV5,888 uniprot,1123 uniprot,1194 xenoMrna,88 3.1 augustusGene,24 30 chainCavPor3,1081 chainHg19,1072 chainMm10,1072 chainMm39,1072 chainMonDom5,1072 chainNetCavPor3,1084 chainNetHg19,1074 chainNetMm10,1074 chainNetMm39,1075 chainNetMonDom5,1075 chainNetRn6,1078 chainRn6,1075 ensGene,201 netCavPor3,1081 netHg19,1072 netMm10,1072 netMm39,1072 netMonDom5,1072 netRn6,1075 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainCavPor3,689 chainHg19,680 chainMm10,680 chainMm39,680 chainMonDom5,680 chainNetCavPor3,692 chainNetHg19,682 chainNetMm10,682 chainNetMm39,683 chainNetMonDom5,683 chainNetRn6,686 chainRn6,683 netCavPor3,689 netHg19,680 netMm10,680 netMm39,680 netMonDom5,680 netRn6,683 317900 chainCavPor3,737 chainCavPor3,749 chainHg19,728 chainHg19,740 chainMm10,728 chainMm10,740 chainMm39,728 chainMm39,740 chainMonDom5,728 chainMonDom5,740 chainNetCavPor3,740 chainNetCavPor3,752 chainNetHg19,730 chainNetHg19,742 chainNetMm10,730 chainNetMm10,742 chainNetMm39,731 chainNetMm39,743 chainNetMonDom5,731 chainNetMonDom5,743 chainNetRn6,734 chainNetRn6,746 chainRn6,731 chainRn6,743 netCavPor3,737 netCavPor3,749 netHg19,728 netHg19,740 netMm10,728 netMm10,740 netMm39,728 netMm39,740 netMonDom5,728 netMonDom5,740 netRn6,731 netRn6,743 318 ctgPos2,36 318300 chainCavPor3,761 chainHg19,752 chainMm10,752 chainMm39,752 chainMonDom5,752 chainNetCavPor3,764 chainNetHg19,754 chainNetMm10,754 chainNetMm39,755 chainNetMonDom5,755 chainNetRn6,758 chainRn6,755 netCavPor3,761 netHg19,752 netMm10,752 netMm39,752 netMonDom5,752 netRn6,755 32 est,789 intronEst,82 intronEst,873 mrna,506 xenoMrna,581 32111 chainCavPor3,722 chainHg19,713 chainMm10,713 chainMm39,713 chainMonDom5,713 chainNetCavPor3,725 chainNetHg19,715 chainNetMm10,715 chainNetMm39,716 chainNetMonDom5,716 chainNetRn6,719 chainRn6,716 netCavPor3,722 netHg19,713 netMm10,713 netMm39,713 netMonDom5,713 netRn6,716 33 refGene,426 refSeqComposite,1813 xenoRefGene,385 3300 chainCavPor3,756 chainHg19,747 chainMm10,747 chainMm39,747 chainMonDom5,747 chainNetCavPor3,759 chainNetHg19,749 chainNetMm10,749 chainNetMm39,750 chainNetMonDom5,750 chainNetRn6,753 chainRn6,750 netCavPor3,756 netHg19,747 netMm10,747 netMm39,747 netMonDom5,747 netRn6,750 345 ctgPos2,46 34990190 refSeqComposite,1555 35 ctgPos2,52 350 chainCavPor3,727 chainCavPor3,739 chainHg19,718 chainHg19,730 chainMm10,718 chainMm10,730 chainMm39,718 chainMm39,730 chainMonDom5,718 chainMonDom5,730 chainNetCavPor3,730 chainNetCavPor3,742 chainNetHg19,720 chainNetHg19,732 chainNetMm10,720 chainNetMm10,732 chainNetMm39,721 chainNetMm39,733 chainNetMonDom5,721 chainNetMonDom5,733 chainNetRn6,724 chainNetRn6,736 chainRn6,721 chainRn6,733 netCavPor3,727 netCavPor3,739 netHg19,718 netHg19,730 netMm10,718 netMm10,730 netMm39,718 netMm39,730 netMonDom5,718 netMonDom5,730 netRn6,721 netRn6,733 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 366 ctgPos2,54 36727467 refSeqComposite,1557 37 tRNAs,386 37104600 HLTOGAannotvHg38v1,372 38-41 ensGene,203 380 HLTOGAannotvHg38v1,368 39s ensGene,163 4 est,809 geneid,173 geneid,193 intronEst,893 mrna,526 refGene,352 refSeqComposite,1739 xenoMrna,601 xenoRefGene,311 4.3 geneid,175 40 uniprot,2002 400 transMapV5,108 403-410 blastHg18KG,176 41 est,763 intronEst,847 mrna,480 xenoMrna,555 418-420 nestedRepeats,359 rmsk,382 42 refGene,392 refSeqComposite,1779 xenoRefGene,351 425 chainCavPor3,728 chainCavPor3,740 chainHg19,719 chainHg19,731 chainMm10,719 chainMm10,731 chainMm39,719 chainMm39,731 chainMonDom5,719 chainMonDom5,731 chainNetCavPor3,731 chainNetCavPor3,743 chainNetHg19,721 chainNetHg19,733 chainNetMm10,721 chainNetMm10,733 chainNetMm39,722 chainNetMm39,734 chainNetMonDom5,722 chainNetMonDom5,734 chainNetRn6,725 chainNetRn6,737 chainRn6,722 chainRn6,734 netCavPor3,728 netCavPor3,740 netHg19,719 netHg19,731 netMm10,719 netMm10,731 netMm39,719 netMm39,731 netMonDom5,719 netMonDom5,731 netRn6,722 netRn6,734 45 refSeqComposite,941 tRNAs,180 45-60 tRNAs,200 450 chainCavPor3,729 chainCavPor3,741 chainHg19,720 chainHg19,732 chainMm10,720 chainMm10,732 chainMm39,720 chainMm39,732 chainMonDom5,720 chainMonDom5,732 chainNetCavPor3,732 chainNetCavPor3,744 chainNetHg19,722 chainNetHg19,734 chainNetMm10,722 chainNetMm10,734 chainNetMm39,723 chainNetMm39,735 chainNetMonDom5,723 chainNetMonDom5,735 chainNetRn6,726 chainNetRn6,738 chainRn6,723 chainRn6,735 netCavPor3,729 netCavPor3,741 netHg19,720 netHg19,732 netMm10,720 netMm10,732 netMm39,720 netMm39,732 netMonDom5,720 netMonDom5,732 netRn6,723 netRn6,735 464-70 uniprot,2049 5 augustusGene,312 blastHg18KG,173 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 est,475 est,516 est,542 intronEst,556 intronEst,597 intronEst,623 tRNAs,434 tRNAs,464 transMapEnsemblV5,9 transMapEnsemblV5,780 transMapEstV5,7 transMapEstV5,749 transMapRefSeqV5,8 transMapRefSeqV5,749 transMapRnaV5,8 transMapRnaV5,749 transMapV5,6 transMapV5,855 uniprot,2048 xenoMrna,86 5-base gc5Base,6 gc5Base,27 50 HLTOGAannotvHg38v1,167 HLTOGAannotvHg38v1,214 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 est,32 intronEst,44 511-5 geneid,194 573-80 microsat,133 simpleRepeat,93 57900 chainCavPor3,734 chainCavPor3,746 chainHg19,725 chainHg19,737 chainMm10,725 chainMm10,737 chainMm39,725 chainMm39,737 chainMonDom5,725 chainMonDom5,737 chainNetCavPor3,737 chainNetCavPor3,749 chainNetHg19,727 chainNetHg19,739 chainNetMm10,727 chainNetMm10,739 chainNetMm39,728 chainNetMm39,740 chainNetMonDom5,728 chainNetMonDom5,740 chainNetRn6,731 chainNetRn6,743 chainRn6,728 chainRn6,740 netCavPor3,734 netCavPor3,746 netHg19,725 netHg19,737 netMm10,725 netMm10,737 netMm39,725 netMm39,737 netMonDom5,725 netMonDom5,737 netRn6,728 netRn6,740 58300 chainCavPor3,758 chainHg19,749 chainMm10,749 chainMm39,749 chainMonDom5,749 chainNetCavPor3,761 chainNetHg19,751 chainNetMm10,751 chainNetMm39,752 chainNetMonDom5,752 chainNetRn6,755 chainRn6,752 netCavPor3,758 netHg19,749 netMm10,749 netMm39,749 netMonDom5,749 netRn6,752 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 6.0 chainNetRn6,8 chainNetRn6,73 chainNetRn6,308 chainNetRn6Viewchain,6 chainNetRn6Viewnet,6 chainRn6,7 chainRn6,70 chainRn6,305 netRn6,7 netRn6,70 netRn6,305 60 blastHg18KG,107 blastHg18KG,119 blastHg18KG,127 60.0 tRNAs,166 600 chainCavPor3,730 chainCavPor3,742 chainHg19,721 chainHg19,733 chainMm10,721 chainMm10,733 chainMm39,721 chainMm39,733 chainMonDom5,721 chainMonDom5,733 chainNetCavPor3,733 chainNetCavPor3,745 chainNetHg19,723 chainNetHg19,735 chainNetMm10,723 chainNetMm10,735 chainNetMm39,724 chainNetMm39,736 chainNetMonDom5,724 chainNetMonDom5,736 chainNetRn6,727 chainNetRn6,739 chainRn6,724 chainRn6,736 netCavPor3,730 netCavPor3,742 netHg19,721 netHg19,733 netMm10,721 netMm10,733 netMm39,721 netMm39,733 netMonDom5,721 netMonDom5,733 netRn6,724 netRn6,736 637-44 augustusGene,313 transMapEnsemblV5,781 transMapEstV5,750 transMapRefSeqV5,750 transMapRnaV5,750 transMapV5,856 656-64 est,810 intronEst,894 mrna,527 refGene,353 refSeqComposite,1740 xenoMrna,602 xenoRefGene,312 657-63 nestedRepeats,392 rmsk,415 659-71 tRNAs,437 663 ctgPos2,44 6643 HLTOGAannotvHg38v1,369 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 tRNAs,507 7.4x ctgPos2,31 72111 chainCavPor3,723 chainHg19,714 chainMm10,714 chainMm39,714 chainMonDom5,714 chainNetCavPor3,726 chainNetHg19,716 chainNetMm10,716 chainNetMm39,717 chainNetMonDom5,717 chainNetRn6,720 chainRn6,717 netCavPor3,723 netHg19,714 netMm10,714 netMm39,714 netMonDom5,714 netRn6,717 743-8 nestedRepeats,414 rmsk,437 750 chainCavPor3,751 chainHg19,742 chainMm10,742 chainMm39,742 chainMonDom5,742 chainNetCavPor3,754 chainNetHg19,744 chainNetMm10,744 chainNetMm39,745 chainNetMonDom5,745 chainNetRn6,748 chainRn6,745 est,664 intronEst,745 netCavPor3,751 netHg19,742 netMm10,742 netMm39,742 netMonDom5,742 netRn6,745 78-94 genscan,228 80 HLTOGAannotvHg38v1,145 HLTOGAannotvHg38v1,179 HLTOGAannotvHg38v1,226 HLTOGAannotvHg38v1,245 8029015 tRNAs,414 805 ctgPos2,45 8165140 tRNAs,510 825 chainCavPor3,752 chainHg19,743 chainMm10,743 chainMm39,743 chainMonDom5,743 chainNetCavPor3,755 chainNetHg19,745 chainNetMm10,745 chainNetMm39,746 chainNetMonDom5,746 chainNetRn6,749 chainRn6,746 netCavPor3,752 netHg19,743 netMm10,743 netMm39,743 netMonDom5,743 netRn6,746 850 chainCavPor3,753 chainHg19,744 chainMm10,744 chainMm39,744 chainMonDom5,744 chainNetCavPor3,756 chainNetHg19,746 chainNetMm10,746 chainNetMm39,747 chainNetMonDom5,747 chainNetRn6,750 chainRn6,747 netCavPor3,753 netHg19,744 netMm10,744 netMm39,744 netMonDom5,744 netRn6,747 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainCavPor3,731 chainCavPor3,743 chainHg19,722 chainHg19,734 chainMm10,722 chainMm10,734 chainMm39,722 chainMm39,734 chainMonDom5,722 chainMonDom5,734 chainNetCavPor3,734 chainNetCavPor3,746 chainNetHg19,724 chainNetHg19,736 chainNetMm10,724 chainNetMm10,736 chainNetMm39,725 chainNetMm39,737 chainNetMonDom5,725 chainNetMonDom5,737 chainNetRn6,728 chainNetRn6,740 chainRn6,725 chainRn6,737 netCavPor3,731 netCavPor3,743 netHg19,722 netHg19,734 netMm10,722 netMm10,734 netMm39,722 netMm39,734 netMonDom5,722 netMonDom5,734 netRn6,725 netRn6,737 9023104 tRNAs,467 9149143 genscan,230 916 ctgPos2,53 93 uniprot,1483 955-64 tRNAs,465 96 est,712 intronEst,793 mrna,428 refGene,308 refSeqComposite,1276 9862982 microsat,135 simpleRepeat,95 99-100 tRNAs,81 _alt uniprot,1419 _fix uniprot,1421 a HLTOGAannotvHg38v1,25 HLTOGAannotvHg38v1,46 HLTOGAannotvHg38v1,50 HLTOGAannotvHg38v1,62 HLTOGAannotvHg38v1,74 HLTOGAannotvHg38v1,116 HLTOGAannotvHg38v1,138 HLTOGAannotvHg38v1,268 HLTOGAannotvHg38v1,291 HLTOGAannotvHg38v1,296 augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainCavPor3,78 chainCavPor3,148 chainCavPor3,201 chainCavPor3,458 chainCavPor3,468 chainCavPor3,472 chainCavPor3,539 chainCavPor3,556 chainCavPor3,559 chainCavPor3,626 chainCavPor3,632 chainCavPor3,637 chainCavPor3,641 chainCavPor3,652 chainCavPor3,684 chainCavPor3,803 chainCavPor3,817 chainCavPor3,823 chainCavPor3,829 chainCavPor3,833 chainCavPor3,836 chainCavPor3,864 chainCavPor3,1054 chainCavPor3,1078 chainCavPor3,1094 chainHg19,75 chainHg19,144 chainHg19,196 chainHg19,451 chainHg19,461 chainHg19,465 chainHg19,532 chainHg19,549 chainHg19,552 chainHg19,618 chainHg19,623 chainHg19,628 chainHg19,632 chainHg19,643 chainHg19,675 chainHg19,794 chainHg19,808 chainHg19,814 chainHg19,820 chainHg19,824 chainHg19,827 chainHg19,855 chainHg19,1045 chainHg19,1069 chainHg19,1085 chainMm10,75 chainMm10,144 chainMm10,196 chainMm10,451 chainMm10,461 chainMm10,465 chainMm10,532 chainMm10,549 chainMm10,552 chainMm10,618 chainMm10,623 chainMm10,628 chainMm10,632 chainMm10,643 chainMm10,675 chainMm10,794 chainMm10,808 chainMm10,814 chainMm10,820 chainMm10,824 chainMm10,827 chainMm10,855 chainMm10,1045 chainMm10,1069 chainMm10,1085 chainMm39,75 chainMm39,144 chainMm39,196 chainMm39,451 chainMm39,461 chainMm39,465 chainMm39,532 chainMm39,549 chainMm39,552 chainMm39,618 chainMm39,623 chainMm39,628 chainMm39,632 chainMm39,643 chainMm39,675 chainMm39,794 chainMm39,808 chainMm39,814 chainMm39,820 chainMm39,824 chainMm39,827 chainMm39,855 chainMm39,1045 chainMm39,1069 chainMm39,1085 chainMonDom5,75 chainMonDom5,144 chainMonDom5,196 chainMonDom5,451 chainMonDom5,461 chainMonDom5,465 chainMonDom5,532 chainMonDom5,549 chainMonDom5,552 chainMonDom5,618 chainMonDom5,623 chainMonDom5,628 chainMonDom5,632 chainMonDom5,643 chainMonDom5,675 chainMonDom5,794 chainMonDom5,808 chainMonDom5,814 chainMonDom5,820 chainMonDom5,824 chainMonDom5,827 chainMonDom5,855 chainMonDom5,1045 chainMonDom5,1069 chainMonDom5,1085 chainNetCavPor3,81 chainNetCavPor3,151 chainNetCavPor3,204 chainNetCavPor3,461 chainNetCavPor3,471 chainNetCavPor3,475 chainNetCavPor3,542 chainNetCavPor3,559 chainNetCavPor3,562 chainNetCavPor3,629 chainNetCavPor3,635 chainNetCavPor3,640 chainNetCavPor3,644 chainNetCavPor3,655 chainNetCavPor3,687 chainNetCavPor3,806 chainNetCavPor3,820 chainNetCavPor3,826 chainNetCavPor3,832 chainNetCavPor3,836 chainNetCavPor3,839 chainNetCavPor3,867 chainNetCavPor3,1057 chainNetCavPor3,1081 chainNetCavPor3,1097 chainNetHg19,77 chainNetHg19,146 chainNetHg19,198 chainNetHg19,453 chainNetHg19,463 chainNetHg19,467 chainNetHg19,534 chainNetHg19,551 chainNetHg19,554 chainNetHg19,620 chainNetHg19,625 chainNetHg19,630 chainNetHg19,634 chainNetHg19,645 chainNetHg19,677 chainNetHg19,796 chainNetHg19,810 chainNetHg19,816 chainNetHg19,822 chainNetHg19,826 chainNetHg19,829 chainNetHg19,857 chainNetHg19,1047 chainNetHg19,1071 chainNetHg19,1087 chainNetMm10,77 chainNetMm10,146 chainNetMm10,198 chainNetMm10,453 chainNetMm10,463 chainNetMm10,467 chainNetMm10,534 chainNetMm10,551 chainNetMm10,554 chainNetMm10,620 chainNetMm10,625 chainNetMm10,630 chainNetMm10,634 chainNetMm10,645 chainNetMm10,677 chainNetMm10,796 chainNetMm10,810 chainNetMm10,816 chainNetMm10,822 chainNetMm10,826 chainNetMm10,829 chainNetMm10,857 chainNetMm10,1047 chainNetMm10,1071 chainNetMm10,1087 chainNetMm39,78 chainNetMm39,147 chainNetMm39,199 chainNetMm39,454 chainNetMm39,464 chainNetMm39,468 chainNetMm39,535 chainNetMm39,552 chainNetMm39,555 chainNetMm39,621 chainNetMm39,626 chainNetMm39,631 chainNetMm39,635 chainNetMm39,646 chainNetMm39,678 chainNetMm39,797 chainNetMm39,811 chainNetMm39,817 chainNetMm39,823 chainNetMm39,827 chainNetMm39,830 chainNetMm39,858 chainNetMm39,1048 chainNetMm39,1072 chainNetMm39,1088 chainNetMonDom5,78 chainNetMonDom5,147 chainNetMonDom5,199 chainNetMonDom5,454 chainNetMonDom5,464 chainNetMonDom5,468 chainNetMonDom5,535 chainNetMonDom5,552 chainNetMonDom5,555 chainNetMonDom5,621 chainNetMonDom5,626 chainNetMonDom5,631 chainNetMonDom5,635 chainNetMonDom5,646 chainNetMonDom5,678 chainNetMonDom5,797 chainNetMonDom5,811 chainNetMonDom5,817 chainNetMonDom5,823 chainNetMonDom5,827 chainNetMonDom5,830 chainNetMonDom5,858 chainNetMonDom5,1048 chainNetMonDom5,1072 chainNetMonDom5,1088 chainNetRn6,80 chainNetRn6,149 chainNetRn6,201 chainNetRn6,457 chainNetRn6,467 chainNetRn6,471 chainNetRn6,538 chainNetRn6,555 chainNetRn6,558 chainNetRn6,624 chainNetRn6,629 chainNetRn6,634 chainNetRn6,638 chainNetRn6,649 chainNetRn6,681 chainNetRn6,800 chainNetRn6,814 chainNetRn6,820 chainNetRn6,826 chainNetRn6,830 chainNetRn6,833 chainNetRn6,861 chainNetRn6,1051 chainNetRn6,1075 chainNetRn6,1091 chainRn6,77 chainRn6,146 chainRn6,198 chainRn6,454 chainRn6,464 chainRn6,468 chainRn6,535 chainRn6,552 chainRn6,555 chainRn6,621 chainRn6,626 chainRn6,631 chainRn6,635 chainRn6,646 chainRn6,678 chainRn6,797 chainRn6,811 chainRn6,817 chainRn6,823 chainRn6,827 chainRn6,830 chainRn6,858 chainRn6,1048 chainRn6,1072 chainRn6,1088 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 ctgPos2,39 ensGene,31 est,115 est,132 est,167 est,193 est,266 est,385 est,465 est,469 est,595 est,621 est,629 est,681 est,700 gap,47 gap,51 gap,81 gap,97 gap,100 gap,107 gap,110 gc5Base,44 geneid,52 geneid,63 geneid,114 genscan,102 genscan,132 gold,48 gold,107 gold,113 intronEst,115 intronEst,148 intronEst,196 intronEst,213 intronEst,248 intronEst,274 intronEst,347 intronEst,466 intronEst,546 intronEst,550 intronEst,676 intronEst,702 intronEst,710 intronEst,762 intronEst,781 microsat,53 microsat,119 mrna,61 mrna,78 mrna,113 mrna,139 mrna,212 mrna,331 mrna,397 mrna,416 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netCavPor3,78 netCavPor3,148 netCavPor3,201 netCavPor3,458 netCavPor3,468 netCavPor3,472 netCavPor3,539 netCavPor3,556 netCavPor3,559 netCavPor3,626 netCavPor3,632 netCavPor3,637 netCavPor3,641 netCavPor3,652 netCavPor3,684 netCavPor3,803 netCavPor3,817 netCavPor3,823 netCavPor3,829 netCavPor3,833 netCavPor3,836 netCavPor3,864 netCavPor3,1054 netCavPor3,1078 netCavPor3,1094 netHg19,75 netHg19,144 netHg19,196 netHg19,451 netHg19,461 netHg19,465 netHg19,532 netHg19,549 netHg19,552 netHg19,618 netHg19,623 netHg19,628 netHg19,632 netHg19,643 netHg19,675 netHg19,794 netHg19,808 netHg19,814 netHg19,820 netHg19,824 netHg19,827 netHg19,855 netHg19,1045 netHg19,1069 netHg19,1085 netMm10,75 netMm10,144 netMm10,196 netMm10,451 netMm10,461 netMm10,465 netMm10,532 netMm10,549 netMm10,552 netMm10,618 netMm10,623 netMm10,628 netMm10,632 netMm10,643 netMm10,675 netMm10,794 netMm10,808 netMm10,814 netMm10,820 netMm10,824 netMm10,827 netMm10,855 netMm10,1045 netMm10,1069 netMm10,1085 netMm39,75 netMm39,144 netMm39,196 netMm39,451 netMm39,461 netMm39,465 netMm39,532 netMm39,549 netMm39,552 netMm39,618 netMm39,623 netMm39,628 netMm39,632 netMm39,643 netMm39,675 netMm39,794 netMm39,808 netMm39,814 netMm39,820 netMm39,824 netMm39,827 netMm39,855 netMm39,1045 netMm39,1069 netMm39,1085 netMonDom5,75 netMonDom5,144 netMonDom5,196 netMonDom5,451 netMonDom5,461 netMonDom5,465 netMonDom5,532 netMonDom5,549 netMonDom5,552 netMonDom5,618 netMonDom5,623 netMonDom5,628 netMonDom5,632 netMonDom5,643 netMonDom5,675 netMonDom5,794 netMonDom5,808 netMonDom5,814 netMonDom5,820 netMonDom5,824 netMonDom5,827 netMonDom5,855 netMonDom5,1045 netMonDom5,1069 netMonDom5,1085 netRn6,77 netRn6,146 netRn6,198 netRn6,454 netRn6,464 netRn6,468 netRn6,535 netRn6,552 netRn6,555 netRn6,621 netRn6,626 netRn6,631 netRn6,635 netRn6,646 netRn6,678 netRn6,797 netRn6,811 netRn6,817 netRn6,823 netRn6,827 netRn6,830 netRn6,858 netRn6,1048 netRn6,1072 netRn6,1088 quality,44 quality,59 refGene,277 refGene,296 refGene,367 refGene,410 refSeqComposite,147 refSeqComposite,158 refSeqComposite,295 refSeqComposite,310 refSeqComposite,529 refSeqComposite,642 refSeqComposite,790 refSeqComposite,1052 refSeqComposite,1245 refSeqComposite,1264 refSeqComposite,1517 refSeqComposite,1536 refSeqComposite,1562 refSeqComposite,1651 refSeqComposite,1754 refSeqComposite,1797 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 tRNAs,35 tRNAs,59 tRNAs,68 tRNAs,86 tRNAs,120 tRNAs,131 tRNAs,144 tRNAs,253 tRNAs,310 tRNAs,371 tRNAs,445 tRNAs,471 tRNAs,475 tRNAs,491 transMapEnsemblV5,83 transMapEnsemblV5,115 transMapEnsemblV5,205 transMapEnsemblV5,318 transMapEnsemblV5,353 transMapEnsemblV5,397 transMapEnsemblV5,423 transMapEnsemblV5,476 transMapEnsemblV5,546 transMapEnsemblV5,625 transMapEnsemblV5,653 transMapEnsemblV5,712 transMapEstV5,52 transMapEstV5,84 transMapEstV5,174 transMapEstV5,287 transMapEstV5,322 transMapEstV5,366 transMapEstV5,392 transMapEstV5,445 transMapEstV5,515 transMapEstV5,594 transMapEstV5,622 transMapEstV5,681 transMapRefSeqV5,52 transMapRefSeqV5,84 transMapRefSeqV5,174 transMapRefSeqV5,287 transMapRefSeqV5,322 transMapRefSeqV5,366 transMapRefSeqV5,392 transMapRefSeqV5,445 transMapRefSeqV5,515 transMapRefSeqV5,594 transMapRefSeqV5,622 transMapRefSeqV5,681 transMapRnaV5,52 transMapRnaV5,84 transMapRnaV5,174 transMapRnaV5,287 transMapRnaV5,322 transMapRnaV5,366 transMapRnaV5,392 transMapRnaV5,445 transMapRnaV5,515 transMapRnaV5,594 transMapRnaV5,622 transMapRnaV5,681 transMapV5,53 transMapV5,190 transMapV5,280 transMapV5,393 transMapV5,428 transMapV5,472 transMapV5,498 transMapV5,551 transMapV5,621 transMapV5,700 transMapV5,728 transMapV5,787 uniprot,140 uniprot,311 uniprot,418 uniprot,459 uniprot,480 uniprot,490 uniprot,523 uniprot,603 uniprot,622 uniprot,708 uniprot,740 uniprot,759 uniprot,805 uniprot,965 uniprot,976 uniprot,988 uniprot,1001 uniprot,1048 uniprot,1071 uniprot,1152 uniprot,1164 uniprot,1179 uniprot,1217 uniprot,1226 uniprot,1234 uniprot,1239 uniprot,1286 uniprot,1458 uniprot,1599 uniprot,1634 uniprot,1735 uniprot,1779 uniprot,1807 uniprot,1922 uniprot,1949 uniprot,2017 uniprot,2023 uniprot,2032 xenoMrna,107 xenoMrna,136 xenoMrna,153 xenoMrna,188 xenoMrna,214 xenoMrna,287 xenoMrna,406 xenoMrna,471 xenoMrna,491 xenoRefGene,237 xenoRefGene,256 xenoRefGene,326 xenoRefGene,369 a90-330-236-356 chainHg19,668 chainNetHg19,670 netHg19,668 a91-114-31-123 chainCavPor3,677 chainMm10,668 chainMm39,668 chainMonDom5,668 chainNetCavPor3,680 chainNetMm10,670 chainNetMm39,671 chainNetMonDom5,671 chainNetRn6,674 chainRn6,671 netCavPor3,677 netMm10,668 netMm39,668 netMonDom5,668 netRn6,671 aa unipModif,1 ab augustusGene,3 augustusGene,16 abbreviated chainCavPor3,589 chainHg19,581 chainMm10,581 chainMm39,581 chainMonDom5,581 chainNetCavPor3,592 chainNetHg19,583 chainNetMm10,583 chainNetMm39,584 chainNetMonDom5,584 chainNetRn6,587 chainRn6,584 netCavPor3,589 netHg19,581 netMm10,581 netMm39,581 netMonDom5,581 netRn6,584 about HLTOGAannotvHg38v1,301 chainCavPor3,464 chainCavPor3,477 chainCavPor3,853 chainHg19,457 chainHg19,470 chainHg19,844 chainMm10,457 chainMm10,470 chainMm10,844 chainMm39,457 chainMm39,470 chainMm39,844 chainMonDom5,457 chainMonDom5,470 chainMonDom5,844 chainNetCavPor3,467 chainNetCavPor3,480 chainNetCavPor3,856 chainNetHg19,459 chainNetHg19,472 chainNetHg19,846 chainNetMm10,459 chainNetMm10,472 chainNetMm10,846 chainNetMm39,460 chainNetMm39,473 chainNetMm39,847 chainNetMonDom5,460 chainNetMonDom5,473 chainNetMonDom5,847 chainNetRn6,463 chainNetRn6,476 chainNetRn6,850 chainRn6,460 chainRn6,473 chainRn6,847 est,31 est,411 genscan,127 intronEst,43 intronEst,492 microsat,98 mrna,348 netCavPor3,464 netCavPor3,477 netCavPor3,853 netHg19,457 netHg19,470 netHg19,844 netMm10,457 netMm10,470 netMm10,844 netMm39,457 netMm39,470 netMm39,844 netMonDom5,457 netMonDom5,470 netMonDom5,844 netRn6,460 netRn6,473 netRn6,847 refGene,216 refSeqComposite,95 refSeqComposite,850 refSeqComposite,1185 refSeqComposite,1380 refSeqComposite,1459 simpleRepeat,59 transMapEnsemblV5,132 transMapEstV5,101 transMapRefSeqV5,101 transMapRnaV5,101 transMapV5,207 xenoMrna,423 xenoRefGene,176 above chainCavPor3,536 chainCavPor3,548 chainCavPor3,568 chainHg19,529 chainHg19,541 chainHg19,561 chainMm10,529 chainMm10,541 chainMm10,561 chainMm39,529 chainMm39,541 chainMm39,561 chainMonDom5,529 chainMonDom5,541 chainMonDom5,561 chainNetCavPor3,539 chainNetCavPor3,551 chainNetCavPor3,571 chainNetHg19,531 chainNetHg19,543 chainNetHg19,563 chainNetMm10,531 chainNetMm10,543 chainNetMm10,563 chainNetMm39,532 chainNetMm39,544 chainNetMm39,564 chainNetMonDom5,532 chainNetMonDom5,544 chainNetMonDom5,564 chainNetRn6,535 chainNetRn6,547 chainNetRn6,567 chainRn6,532 chainRn6,544 chainRn6,564 nestedRepeats,218 netCavPor3,536 netCavPor3,548 netCavPor3,568 netHg19,529 netHg19,541 netHg19,561 netMm10,529 netMm10,541 netMm10,561 netMm39,529 netMm39,541 netMm39,561 netMonDom5,529 netMonDom5,541 netMonDom5,561 netRn6,532 netRn6,544 netRn6,564 tRNAs,122 uniprot,1525 abundance chainCavPor3,183 chainHg19,178 chainMm10,178 chainMm39,178 chainMonDom5,178 chainNetCavPor3,186 chainNetHg19,180 chainNetMm10,180 chainNetMm39,181 chainNetMonDom5,181 chainNetRn6,183 chainRn6,180 netCavPor3,183 netHg19,178 netMm10,178 netMm39,178 netMonDom5,178 netRn6,180 acad chainCavPor3,1074 chainHg19,1065 chainMm10,1065 chainMm39,1065 chainMonDom5,1065 chainNetCavPor3,1077 chainNetHg19,1067 chainNetMm10,1067 chainNetMm39,1068 chainNetMonDom5,1068 chainNetRn6,1071 chainRn6,1068 netCavPor3,1074 netHg19,1065 netMm10,1065 netMm39,1065 netMonDom5,1065 netRn6,1068 acceptor genscan,32 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 ensGene,56 ensGene,100 refSeqComposite,1286 refSeqComposite,1350 refSeqComposite,1440 refSeqComposite,1649 transMapEnsemblV5,516 transMapEnsemblV5,575 transMapEstV5,485 transMapEstV5,544 transMapRefSeqV5,485 transMapRefSeqV5,544 transMapRnaV5,485 transMapRnaV5,544 transMapV5,591 transMapV5,650 uniprot,896 uniprot,1706 uniprot,1838 accessed refSeqComposite,1295 refSeqComposite,1318 transMapEnsemblV5,525 transMapEstV5,494 transMapRefSeqV5,494 transMapRnaV5,494 transMapV5,600 accesses refSeqComposite,1623 accessing refSeqComposite,1381 transMapEnsemblV5,568 transMapEstV5,537 transMapRefSeqV5,537 transMapRnaV5,537 transMapV5,643 accession gold,145 refGene,156 refGene,168 refSeqComposite,777 refSeqComposite,802 ucscToINSDC,2 ucscToINSDC,23 xenoRefGene,116 xenoRefGene,128 accession.version-srcuniq.destuniq transMapEnsemblV5,419 transMapEstV5,388 transMapRefSeqV5,388 transMapRnaV5,388 transMapV5,494 accessions refSeqComposite,221 refSeqComposite,350 refSeqComposite,492 transMapEnsemblV5,391 transMapEstV5,360 transMapRefSeqV5,360 transMapRnaV5,360 transMapV5,466 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 accordingly tRNAs,281 accurately HLTOGAannotvHg38v1,91 acgt chainCavPor3,676 chainHg19,667 chainMm10,667 chainMm39,667 chainMonDom5,667 chainNetCavPor3,679 chainNetHg19,669 chainNetMm10,669 chainNetMm39,670 chainNetMonDom5,670 chainNetRn6,673 chainRn6,670 netCavPor3,676 netHg19,667 netMm10,667 netMm39,667 netMonDom5,667 netRn6,670 acid blastHg18KG,63 unipModif,5 unipMut,4 uniprot,339 uniprot,351 acids blastHg18KG,133 ensGene,196 est,759 est,784 intronEst,843 intronEst,868 microsat,126 mrna,476 mrna,501 refGene,388 refGene,421 refSeqComposite,1775 refSeqComposite,1808 simpleRepeat,86 tRNAs,382 tRNAs,405 tRNAs,458 tRNAs,501 uniprot,620 uniprot,1998 xenoMrna,551 xenoMrna,576 xenoRefGene,347 xenoRefGene,380 acronym uniprot,546 added chainCavPor3,599 chainHg19,591 chainMm10,591 chainMm39,591 chainMonDom5,591 chainNetCavPor3,602 chainNetHg19,593 chainNetMm10,593 chainNetMm39,594 chainNetMonDom5,594 chainNetRn6,597 chainRn6,594 nestedRepeats,147 netCavPor3,599 netHg19,591 netMm10,591 netMm39,591 netMonDom5,591 netRn6,594 transMapEnsemblV5,425 transMapEnsemblV5,435 transMapEstV5,394 transMapEstV5,404 transMapRefSeqV5,394 transMapRefSeqV5,404 transMapRnaV5,394 transMapRnaV5,404 transMapV5,500 transMapV5,510 uniprot,1187 additional HLTOGAannotvHg38v1,299 nestedRepeats,288 rmsk,295 additions refGene,59 refSeqComposite,118 adjust refSeqComposite,740 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 uniprot,1917 advice chainCavPor3,939 chainCavPor3,971 chainHg19,930 chainHg19,962 chainMm10,930 chainMm10,962 chainMm39,930 chainMm39,962 chainMonDom5,930 chainMonDom5,962 chainNetCavPor3,942 chainNetCavPor3,974 chainNetHg19,932 chainNetHg19,964 chainNetMm10,932 chainNetMm10,964 chainNetMm39,933 chainNetMm39,965 chainNetMonDom5,933 chainNetMonDom5,965 chainNetRn6,936 chainNetRn6,968 chainRn6,933 chainRn6,965 netCavPor3,939 netCavPor3,971 netHg19,930 netHg19,962 netMm10,930 netMm10,962 netMm39,930 netMm39,962 netMonDom5,930 netMonDom5,962 netRn6,933 netRn6,965 advise refSeqComposite,77 ae HLTOGAannotvHg38v1,347 af nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainCavPor3,88 chainHg19,85 chainMm10,85 chainMm39,85 chainMonDom5,85 chainNetCavPor3,91 chainNetHg19,87 chainNetMm10,87 chainNetMm39,88 chainNetMonDom5,88 chainNetRn6,90 chainRn6,87 netCavPor3,88 netHg19,85 netMm10,85 netMm39,85 netMonDom5,85 netRn6,87 after chainCavPor3,911 chainHg19,902 chainMm10,902 chainMm39,902 chainMonDom5,902 chainNetCavPor3,914 chainNetHg19,904 chainNetMm10,904 chainNetMm39,905 chainNetMonDom5,905 chainNetRn6,908 chainRn6,905 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netCavPor3,911 netHg19,902 netMm10,902 netMm39,902 netMonDom5,902 netRn6,905 uniprot,294 uniprot,1329 ag intronEst,89 again transMapEnsemblV5,407 transMapEstV5,376 transMapRefSeqV5,376 transMapRnaV5,376 transMapV5,482 uniprot,629 uniprot,1500 against est,649 intronEst,35 intronEst,730 mrna,341 mrna,389 refGene,260 refSeqComposite,1228 transMapEnsemblV5,125 transMapEstV5,94 transMapRefSeqV5,94 transMapRnaV5,94 transMapV5,200 xenoMrna,416 xenoMrna,463 xenoRefGene,220 ahmed HLTOGAannotvHg38v1,348 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al HLTOGAannotvHg38v1,355 cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 ensGene,46 ensGene,189 refGene,379 refSeqComposite,1766 transMapEnsemblV5,733 transMapEstV5,702 transMapRefSeqV5,702 transMapRnaV5,702 transMapV5,808 xenoRefGene,338 alejo uniprot,1966 algorithm augustusGene,130 tRNAs,40 transMapEnsemblV5,28 transMapEstV5,26 transMapRefSeqV5,26 transMapRnaV5,26 transMapV5,25 algorithms uniprot,52 align chainCavPor3,199 chainHg19,194 chainMm10,194 chainMm39,194 chainMonDom5,194 chainNetCavPor3,202 chainNetHg19,196 chainNetMm10,196 chainNetMm39,197 chainNetMonDom5,197 chainNetRn6,199 chainRn6,196 est,679 intronEst,760 netCavPor3,199 netHg19,194 netMm10,194 netMm39,194 netMonDom5,194 netRn6,196 uniprot,1216 alignable chainCavPor3,24 chainCavPor3,40 chainHg19,22 chainHg19,38 chainMm10,22 chainMm10,38 chainMm39,22 chainMm39,38 chainMonDom5,22 chainMonDom5,38 chainNetCavPor3,27 chainNetCavPor3,43 chainNetHg19,24 chainNetHg19,40 chainNetMm10,24 chainNetMm10,40 chainNetMm39,25 chainNetMm39,41 chainNetMonDom5,25 chainNetMonDom5,41 chainNetRn6,26 chainNetRn6,42 chainRn6,23 chainRn6,39 netCavPor3,24 netCavPor3,40 netHg19,22 netHg19,38 netMm10,22 netMm10,38 netMm39,22 netMm39,38 netMonDom5,22 netMonDom5,38 netRn6,23 netRn6,39 aligned blastHg18KG,47 blastHg18KG,71 chainCavPor3,592 chainHg19,584 chainMm10,584 chainMm39,584 chainMonDom5,584 chainNetCavPor3,595 chainNetHg19,586 chainNetMm10,586 chainNetMm39,587 chainNetMonDom5,587 chainNetRn6,590 chainRn6,587 est,648 est,684 intronEst,34 intronEst,152 intronEst,729 intronEst,765 mrna,388 mrna,400 netCavPor3,592 netHg19,584 netMm10,584 netMm39,584 netMonDom5,584 netRn6,587 refGene,259 refGene,280 refSeqComposite,80 refSeqComposite,189 refSeqComposite,304 refSeqComposite,894 refSeqComposite,1057 refSeqComposite,1227 refSeqComposite,1248 transMapV5,116 uniprot,783 uniprot,973 uniprot,1007 uniprot,1246 uniprot,1335 uniprot,1472 xenoMrna,462 xenoMrna,474 xenoRefGene,219 xenoRefGene,240 aligning chainCavPor3,137 chainCavPor3,336 chainCavPor3,366 chainHg19,133 chainHg19,329 chainHg19,359 chainMm10,133 chainMm10,329 chainMm10,359 chainMm39,133 chainMm39,329 chainMm39,359 chainMonDom5,133 chainMonDom5,329 chainMonDom5,359 chainNetCavPor3,140 chainNetCavPor3,339 chainNetCavPor3,369 chainNetHg19,135 chainNetHg19,331 chainNetHg19,361 chainNetMm10,135 chainNetMm10,331 chainNetMm10,361 chainNetMm39,136 chainNetMm39,332 chainNetMm39,362 chainNetMonDom5,136 chainNetMonDom5,332 chainNetMonDom5,362 chainNetRn6,138 chainNetRn6,335 chainNetRn6,365 chainRn6,135 chainRn6,332 chainRn6,362 est,397 intronEst,478 netCavPor3,137 netCavPor3,336 netCavPor3,366 netHg19,133 netHg19,329 netHg19,359 netMm10,133 netMm10,329 netMm10,359 netMm39,133 netMm39,329 netMm39,359 netMonDom5,133 netMonDom5,329 netMonDom5,359 netRn6,135 netRn6,332 netRn6,362 uniprot,952 alignment HLTOGAannotvHg38v1,65 blastHg18KG,165 chainCavPor3,262 chainCavPor3,1021 chainHg19,257 chainHg19,1012 chainMm10,257 chainMm10,1012 chainMm39,257 chainMm39,1012 chainMonDom5,257 chainMonDom5,1012 chainNetCavPor3,265 chainNetCavPor3,1024 chainNetHg19,259 chainNetHg19,1014 chainNetMm10,259 chainNetMm10,1014 chainNetMm39,260 chainNetMm39,1015 chainNetMonDom5,260 chainNetMonDom5,1015 chainNetRn6,262 chainNetRn6,1018 chainRn6,259 chainRn6,1015 est,55 est,420 est,426 est,438 est,689 est,802 intronEst,76 intronEst,139 intronEst,501 intronEst,507 intronEst,519 intronEst,770 intronEst,886 mrna,36 mrna,359 mrna,365 mrna,377 mrna,405 mrna,519 netCavPor3,10 netCavPor3,262 netCavPor3,1021 netHg19,8 netHg19,257 netHg19,1012 netMm10,8 netMm10,257 netMm10,1012 netMm39,8 netMm39,257 netMm39,1012 netMonDom5,8 netMonDom5,257 netMonDom5,1012 netRn6,9 netRn6,259 netRn6,1015 refGene,269 refGene,285 refGene,345 refSeqComposite,193 refSeqComposite,327 refSeqComposite,458 refSeqComposite,1146 refSeqComposite,1237 refSeqComposite,1253 refSeqComposite,1732 transMapEnsemblV5,27 transMapEnsemblV5,79 transMapEnsemblV5,103 transMapEnsemblV5,140 transMapEnsemblV5,196 transMapEnsemblV5,209 transMapEnsemblV5,387 transMapEnsemblV5,430 transMapEstV5,25 transMapEstV5,48 transMapEstV5,72 transMapEstV5,109 transMapEstV5,165 transMapEstV5,178 transMapEstV5,356 transMapEstV5,399 transMapRefSeqV5,25 transMapRefSeqV5,48 transMapRefSeqV5,72 transMapRefSeqV5,109 transMapRefSeqV5,165 transMapRefSeqV5,178 transMapRefSeqV5,356 transMapRefSeqV5,399 transMapRnaV5,25 transMapRnaV5,48 transMapRnaV5,72 transMapRnaV5,109 transMapRnaV5,165 transMapRnaV5,178 transMapRnaV5,356 transMapRnaV5,399 transMapV5,24 transMapV5,49 transMapV5,178 transMapV5,215 transMapV5,271 transMapV5,284 transMapV5,462 transMapV5,505 unipAliSwissprot,4 unipAliTrembl,4 uniprot,108 uniprot,135 uniprot,191 uniprot,807 uniprot,914 uniprot,1175 uniprot,1429 uniprot,1523 uniprot,1620 uniprot,1629 uniprot,1636 uniprot,1642 uniprot,1704 uniprot,1862 xenoMrna,41 xenoMrna,434 xenoMrna,440 xenoMrna,452 xenoMrna,479 xenoMrna,594 xenoRefGene,229 xenoRefGene,245 xenoRefGene,304 alignments HLTOGAannotvHg38v1,23 HLTOGAannotvHg38v1,80 HLTOGAannotvHg38v1,313 augustusGene,300 blastHg18KG,18 chainCavPor3,11 chainCavPor3,65 chainCavPor3,451 chainCavPor3,604 chainCavPor3,616 chainCavPor3,624 chainCavPor3,651 chainCavPor3,769 chainCavPor3,1041 chainCavPor3,1106 chainHg19,9 chainHg19,63 chainHg19,444 chainHg19,596 chainHg19,608 chainHg19,616 chainHg19,642 chainHg19,760 chainHg19,1032 chainHg19,1097 chainMm10,9 chainMm10,63 chainMm10,444 chainMm10,596 chainMm10,608 chainMm10,616 chainMm10,642 chainMm10,760 chainMm10,1032 chainMm10,1097 chainMm39,9 chainMm39,63 chainMm39,444 chainMm39,596 chainMm39,608 chainMm39,616 chainMm39,642 chainMm39,760 chainMm39,1032 chainMm39,1097 chainMonDom5,9 chainMonDom5,63 chainMonDom5,444 chainMonDom5,596 chainMonDom5,608 chainMonDom5,616 chainMonDom5,642 chainMonDom5,760 chainMonDom5,1032 chainMonDom5,1097 chainNetCavPor3,14 chainNetCavPor3,68 chainNetCavPor3,454 chainNetCavPor3,607 chainNetCavPor3,619 chainNetCavPor3,627 chainNetCavPor3,654 chainNetCavPor3,772 chainNetCavPor3,1044 chainNetCavPor3,1109 chainNetCavPor3Viewchain,11 chainNetCavPor3Viewnet,11 chainNetHg19,11 chainNetHg19,65 chainNetHg19,446 chainNetHg19,598 chainNetHg19,610 chainNetHg19,618 chainNetHg19,644 chainNetHg19,762 chainNetHg19,1034 chainNetHg19,1099 chainNetHg19Viewchain,10 chainNetHg19Viewnet,10 chainNetMm10,11 chainNetMm10,65 chainNetMm10,446 chainNetMm10,598 chainNetMm10,610 chainNetMm10,618 chainNetMm10,644 chainNetMm10,762 chainNetMm10,1034 chainNetMm10,1099 chainNetMm10Viewchain,10 chainNetMm10Viewnet,10 chainNetMm39,12 chainNetMm39,66 chainNetMm39,447 chainNetMm39,599 chainNetMm39,611 chainNetMm39,619 chainNetMm39,645 chainNetMm39,763 chainNetMm39,1035 chainNetMm39,1100 chainNetMm39Viewchain,10 chainNetMm39Viewnet,10 chainNetMonDom5,12 chainNetMonDom5,66 chainNetMonDom5,447 chainNetMonDom5,599 chainNetMonDom5,611 chainNetMonDom5,619 chainNetMonDom5,645 chainNetMonDom5,763 chainNetMonDom5,1035 chainNetMonDom5,1100 chainNetMonDom5Viewchain,10 chainNetMonDom5Viewnet,10 chainNetRn6,13 chainNetRn6,67 chainNetRn6,450 chainNetRn6,602 chainNetRn6,614 chainNetRn6,622 chainNetRn6,648 chainNetRn6,766 chainNetRn6,1038 chainNetRn6,1103 chainNetRn6Viewchain,11 chainNetRn6Viewnet,11 chainRn6,10 chainRn6,64 chainRn6,447 chainRn6,599 chainRn6,611 chainRn6,619 chainRn6,645 chainRn6,763 chainRn6,1035 chainRn6,1100 est,14 est,698 intronEst,16 intronEst,779 mrna,15 mrna,414 ncbiRefSeqPsl,2 ncbiRefSeqPsl,4 netCavPor3,65 netCavPor3,451 netCavPor3,604 netCavPor3,616 netCavPor3,624 netCavPor3,651 netCavPor3,769 netCavPor3,1041 netCavPor3,1106 netHg19,63 netHg19,444 netHg19,596 netHg19,608 netHg19,616 netHg19,642 netHg19,760 netHg19,1032 netHg19,1097 netMm10,63 netMm10,444 netMm10,596 netMm10,608 netMm10,616 netMm10,642 netMm10,760 netMm10,1032 netMm10,1097 netMm39,63 netMm39,444 netMm39,596 netMm39,608 netMm39,616 netMm39,642 netMm39,760 netMm39,1032 netMm39,1097 netMonDom5,63 netMonDom5,444 netMonDom5,596 netMonDom5,608 netMonDom5,616 netMonDom5,642 netMonDom5,760 netMonDom5,1032 netMonDom5,1097 netRn6,64 netRn6,447 netRn6,599 netRn6,611 netRn6,619 netRn6,645 netRn6,763 netRn6,1035 netRn6,1100 refGene,294 refSeqComposite,267 refSeqComposite,366 refSeqComposite,433 refSeqComposite,435 refSeqComposite,1207 refSeqComposite,1262 refSeqComposite,1419 rmsk,306 tRNAs,241 transMapEnsemblV5,21 transMapEnsemblV5,72 transMapEnsemblV5,154 transMapEnsemblV5,167 transMapEnsemblV5,325 transMapEnsemblV5,337 transMapEnsemblV5,347 transMapEnsemblV5,370 transMapEnsemblV5,441 transMapEnsemblV5,453 transMapEnsemblV5,768 transMapEstV5,19 transMapEstV5,41 transMapEstV5,123 transMapEstV5,136 transMapEstV5,294 transMapEstV5,306 transMapEstV5,316 transMapEstV5,339 transMapEstV5,410 transMapEstV5,422 transMapEstV5,737 transMapRefSeqV5,19 transMapRefSeqV5,41 transMapRefSeqV5,123 transMapRefSeqV5,136 transMapRefSeqV5,294 transMapRefSeqV5,306 transMapRefSeqV5,316 transMapRefSeqV5,339 transMapRefSeqV5,410 transMapRefSeqV5,422 transMapRefSeqV5,737 transMapRnaV5,19 transMapRnaV5,41 transMapRnaV5,123 transMapRnaV5,136 transMapRnaV5,294 transMapRnaV5,306 transMapRnaV5,316 transMapRnaV5,339 transMapRnaV5,410 transMapRnaV5,422 transMapRnaV5,737 transMapV5,4 transMapV5,18 transMapV5,40 transMapV5,67 transMapV5,85 transMapV5,127 transMapV5,140 transMapV5,229 transMapV5,242 transMapV5,400 transMapV5,412 transMapV5,422 transMapV5,445 transMapV5,516 transMapV5,528 transMapV5,843 uniprot,82 uniprot,100 uniprot,637 uniprot,793 uniprot,814 uniprot,876 uniprot,1138 uniprot,1148 uniprot,1161 uniprot,1309 uniprot,1410 uniprot,1487 xenoMrna,16 xenoMrna,489 xenoRefGene,254 aligns transMapV5,162 all augustusGene,207 chainCavPor3,623 chainHg19,615 chainMm10,615 chainMm39,615 chainMonDom5,615 chainNetCavPor3,626 chainNetHg19,617 chainNetMm10,617 chainNetMm39,618 chainNetMonDom5,618 chainNetRn6,621 chainRn6,618 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 est,189 est,243 est,298 est,393 est,485 gold,125 intronEst,118 intronEst,270 intronEst,324 intronEst,379 intronEst,474 intronEst,566 mrna,135 mrna,189 mrna,244 ncbiRefSeq,2 nestedRepeats,138 nestedRepeats,170 netCavPor3,623 netHg19,615 netMm10,615 netMm39,615 netMonDom5,615 netRn6,618 refSeqComposite,33 refSeqComposite,84 refSeqComposite,177 refSeqComposite,182 refSeqComposite,198 refSeqComposite,200 refSeqComposite,214 refSeqComposite,344 refSeqComposite,380 refSeqComposite,585 refSeqComposite,788 refSeqComposite,1405 refSeqComposite,1569 refSeqComposite,1661 refSeqComposite,1666 rmsk,65 tRNAs,215 transMapEnsemblV5,190 transMapEstV5,159 transMapRefSeqV5,159 transMapRnaV5,159 transMapV5,265 uniprot,89 uniprot,121 uniprot,204 uniprot,395 uniprot,956 uniprot,1107 uniprot,1167 uniprot,1311 uniprot,1337 uniprot,1343 uniprot,1418 uniprot,1542 uniprot,1685 uniprot,1979 xenoMrna,210 xenoMrna,264 xenoMrna,319 allowed est,660 intronEst,741 allows augustusGene,168 chainCavPor3,83 chainHg19,80 chainMm10,80 chainMm39,80 chainMonDom5,80 chainNetCavPor3,86 chainNetHg19,82 chainNetMm10,82 chainNetMm39,83 chainNetMonDom5,83 chainNetRn6,85 chainRn6,82 est,388 intronEst,469 mrna,334 netCavPor3,83 netHg19,80 netMm10,80 netMm39,80 netMonDom5,80 netRn6,82 refGene,187 refSeqComposite,821 transMapEnsemblV5,118 transMapEnsemblV5,287 transMapEstV5,87 transMapEstV5,256 transMapRefSeqV5,87 transMapRefSeqV5,256 transMapRnaV5,87 transMapRnaV5,256 transMapV5,193 transMapV5,362 xenoMrna,409 xenoRefGene,147 aln unipAliSwissprot,2 unipAliTrembl,2 alone augustusGene,33 along geneid,80 transMapEnsemblV5,181 transMapEstV5,150 transMapRefSeqV5,150 transMapRnaV5,150 transMapV5,256 alpha refSeqComposite,417 already chainCavPor3,814 chainHg19,805 chainMm10,805 chainMm39,805 chainMonDom5,805 chainNetCavPor3,817 chainNetHg19,807 chainNetMm10,807 chainNetMm39,808 chainNetMonDom5,808 chainNetRn6,811 chainRn6,808 netCavPor3,814 netHg19,805 netMm10,805 netMm39,805 netMonDom5,805 netRn6,808 also HLTOGAannotvHg38v1,190 blastHg18KG,135 chainCavPor3,94 chainHg19,91 chainMm10,91 chainMm39,91 chainMonDom5,91 chainNetCavPor3,97 chainNetHg19,93 chainNetMm10,93 chainNetMm39,94 chainNetMonDom5,94 chainNetRn6,96 chainRn6,93 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ensGene,48 est,270 est,378 est,429 est,598 gap,184 gold,33 gold,154 intronEst,351 intronEst,459 intronEst,510 intronEst,679 mrna,216 mrna,324 mrna,368 netCavPor3,94 netHg19,91 netMm10,91 netMm39,91 netMonDom5,91 netRn6,93 refSeqComposite,1125 refSeqComposite,1316 refSeqComposite,1349 refSeqComposite,1581 transMapEnsemblV5,108 transMapEnsemblV5,143 transMapEnsemblV5,645 transMapEstV5,77 transMapEstV5,112 transMapEstV5,614 transMapRefSeqV5,77 transMapRefSeqV5,112 transMapRefSeqV5,614 transMapRnaV5,77 transMapRnaV5,112 transMapRnaV5,614 transMapV5,183 transMapV5,218 transMapV5,720 uniprot,666 uniprot,706 uniprot,1799 xenoMrna,291 xenoMrna,399 xenoMrna,443 alt uniprot,850 alter est,126 intronEst,207 mrna,72 xenoMrna,147 alternating gold,79 alternative augustusGene,122 unipAliSwissprot,16 uniprot,163 uniprot,670 alternatives-from-sampling augustusGene,131 although tRNAs,133 altschul blastHg18KG,153 alus rmsk,160 always gold,110 uniprot,503 uniprot,960 uniprot,1411 uniprot,1579 xenoMrna,85 ambiguous refSeqComposite,986 amino blastHg18KG,62 blastHg18KG,132 unipModif,4 unipMut,3 uniprot,338 uniprot,350 uniprot,619 amount rmsk,215 amsterdam genscan,201 an blastHg18KG,89 chainCavPor3,156 chainCavPor3,182 chainCavPor3,188 chainHg19,151 chainHg19,177 chainHg19,183 chainMm10,151 chainMm10,177 chainMm10,183 chainMm39,151 chainMm39,177 chainMm39,183 chainMonDom5,151 chainMonDom5,177 chainMonDom5,183 chainNetCavPor3,159 chainNetCavPor3,185 chainNetCavPor3,191 chainNetHg19,153 chainNetHg19,179 chainNetHg19,185 chainNetMm10,153 chainNetMm10,179 chainNetMm10,185 chainNetMm39,154 chainNetMm39,180 chainNetMm39,186 chainNetMonDom5,154 chainNetMonDom5,180 chainNetMonDom5,186 chainNetRn6,156 chainNetRn6,182 chainNetRn6,188 chainRn6,153 chainRn6,179 chainRn6,185 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 ctgPos2,49 est,447 est,494 est,577 gc5Base,65 intronEst,59 intronEst,528 intronEst,575 intronEst,658 nestedRepeats,196 nestedRepeats,347 netCavPor3,156 netCavPor3,182 netCavPor3,188 netHg19,151 netHg19,177 netHg19,183 netMm10,151 netMm10,177 netMm10,183 netMm39,151 netMm39,177 netMm39,183 netMonDom5,151 netMonDom5,177 netMonDom5,183 netRn6,153 netRn6,179 netRn6,185 quality,78 refGene,181 refGene,268 refGene,381 refSeqComposite,744 refSeqComposite,815 refSeqComposite,1236 refSeqComposite,1768 rmsk,370 tRNAs,26 tRNAs,34 tRNAs,46 uniprot,765 uniprot,899 uniprot,1203 uniprot,1467 uniprot,1568 xenoRefGene,141 xenoRefGene,228 xenoRefGene,340 analysis refSeqComposite,75 refSeqComposite,1454 tRNAs,400 tRNAs,495 transMapEnsemblV5,537 transMapEstV5,506 transMapRefSeqV5,506 transMapRnaV5,506 transMapV5,612 uniprot,1648 uniprot,1728 analyze microsat,122 simpleRepeat,82 and HLTOGAannotvHg38v1,12 HLTOGAannotvHg38v1,34 HLTOGAannotvHg38v1,61 HLTOGAannotvHg38v1,69 HLTOGAannotvHg38v1,83 HLTOGAannotvHg38v1,86 HLTOGAannotvHg38v1,110 HLTOGAannotvHg38v1,130 HLTOGAannotvHg38v1,153 HLTOGAannotvHg38v1,176 HLTOGAannotvHg38v1,223 HLTOGAannotvHg38v1,310 augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 blastHg18KG,10 blastHg18KG,25 blastHg18KG,123 chainCavPor3,101 chainCavPor3,115 chainCavPor3,230 chainCavPor3,238 chainCavPor3,252 chainCavPor3,291 chainCavPor3,314 chainCavPor3,440 chainCavPor3,595 chainCavPor3,631 chainCavPor3,639 chainCavPor3,780 chainCavPor3,858 chainCavPor3,890 chainCavPor3,901 chainCavPor3,910 chainCavPor3,935 chainCavPor3,950 chainCavPor3,975 chainCavPor3,981 chainCavPor3,987 chainCavPor3,994 chainCavPor3,1000 chainCavPor3,1064 chainCavPor3,1069 chainHg19,97 chainHg19,111 chainHg19,225 chainHg19,233 chainHg19,247 chainHg19,285 chainHg19,307 chainHg19,433 chainHg19,587 chainHg19,622 chainHg19,630 chainHg19,771 chainHg19,849 chainHg19,881 chainHg19,892 chainHg19,901 chainHg19,926 chainHg19,941 chainHg19,966 chainHg19,972 chainHg19,978 chainHg19,985 chainHg19,991 chainHg19,1055 chainHg19,1060 chainMm10,97 chainMm10,111 chainMm10,225 chainMm10,233 chainMm10,247 chainMm10,285 chainMm10,307 chainMm10,433 chainMm10,587 chainMm10,622 chainMm10,630 chainMm10,771 chainMm10,849 chainMm10,881 chainMm10,892 chainMm10,901 chainMm10,926 chainMm10,941 chainMm10,966 chainMm10,972 chainMm10,978 chainMm10,985 chainMm10,991 chainMm10,1055 chainMm10,1060 chainMm39,97 chainMm39,111 chainMm39,225 chainMm39,233 chainMm39,247 chainMm39,285 chainMm39,307 chainMm39,433 chainMm39,587 chainMm39,622 chainMm39,630 chainMm39,771 chainMm39,849 chainMm39,881 chainMm39,892 chainMm39,901 chainMm39,926 chainMm39,941 chainMm39,966 chainMm39,972 chainMm39,978 chainMm39,985 chainMm39,991 chainMm39,1055 chainMm39,1060 chainMonDom5,97 chainMonDom5,111 chainMonDom5,225 chainMonDom5,233 chainMonDom5,247 chainMonDom5,285 chainMonDom5,307 chainMonDom5,433 chainMonDom5,587 chainMonDom5,622 chainMonDom5,630 chainMonDom5,771 chainMonDom5,849 chainMonDom5,881 chainMonDom5,892 chainMonDom5,901 chainMonDom5,926 chainMonDom5,941 chainMonDom5,966 chainMonDom5,972 chainMonDom5,978 chainMonDom5,985 chainMonDom5,991 chainMonDom5,1055 chainMonDom5,1060 chainNetCavPor3,12 chainNetCavPor3,104 chainNetCavPor3,118 chainNetCavPor3,233 chainNetCavPor3,241 chainNetCavPor3,255 chainNetCavPor3,294 chainNetCavPor3,317 chainNetCavPor3,443 chainNetCavPor3,598 chainNetCavPor3,634 chainNetCavPor3,642 chainNetCavPor3,783 chainNetCavPor3,861 chainNetCavPor3,893 chainNetCavPor3,904 chainNetCavPor3,913 chainNetCavPor3,938 chainNetCavPor3,953 chainNetCavPor3,978 chainNetCavPor3,984 chainNetCavPor3,990 chainNetCavPor3,997 chainNetCavPor3,1003 chainNetCavPor3,1067 chainNetCavPor3,1072 chainNetCavPor3Viewchain,9 chainNetCavPor3Viewnet,9 chainNetHg19,9 chainNetHg19,99 chainNetHg19,113 chainNetHg19,227 chainNetHg19,235 chainNetHg19,249 chainNetHg19,287 chainNetHg19,309 chainNetHg19,435 chainNetHg19,589 chainNetHg19,624 chainNetHg19,632 chainNetHg19,773 chainNetHg19,851 chainNetHg19,883 chainNetHg19,894 chainNetHg19,903 chainNetHg19,928 chainNetHg19,943 chainNetHg19,968 chainNetHg19,974 chainNetHg19,980 chainNetHg19,987 chainNetHg19,993 chainNetHg19,1057 chainNetHg19,1062 chainNetHg19Viewchain,8 chainNetHg19Viewnet,8 chainNetMm10,9 chainNetMm10,99 chainNetMm10,113 chainNetMm10,227 chainNetMm10,235 chainNetMm10,249 chainNetMm10,287 chainNetMm10,309 chainNetMm10,435 chainNetMm10,589 chainNetMm10,624 chainNetMm10,632 chainNetMm10,773 chainNetMm10,851 chainNetMm10,883 chainNetMm10,894 chainNetMm10,903 chainNetMm10,928 chainNetMm10,943 chainNetMm10,968 chainNetMm10,974 chainNetMm10,980 chainNetMm10,987 chainNetMm10,993 chainNetMm10,1057 chainNetMm10,1062 chainNetMm10Viewchain,8 chainNetMm10Viewnet,8 chainNetMm39,10 chainNetMm39,100 chainNetMm39,114 chainNetMm39,228 chainNetMm39,236 chainNetMm39,250 chainNetMm39,288 chainNetMm39,310 chainNetMm39,436 chainNetMm39,590 chainNetMm39,625 chainNetMm39,633 chainNetMm39,774 chainNetMm39,852 chainNetMm39,884 chainNetMm39,895 chainNetMm39,904 chainNetMm39,929 chainNetMm39,944 chainNetMm39,969 chainNetMm39,975 chainNetMm39,981 chainNetMm39,988 chainNetMm39,994 chainNetMm39,1058 chainNetMm39,1063 chainNetMm39Viewchain,8 chainNetMm39Viewnet,8 chainNetMonDom5,10 chainNetMonDom5,100 chainNetMonDom5,114 chainNetMonDom5,228 chainNetMonDom5,236 chainNetMonDom5,250 chainNetMonDom5,288 chainNetMonDom5,310 chainNetMonDom5,436 chainNetMonDom5,590 chainNetMonDom5,625 chainNetMonDom5,633 chainNetMonDom5,774 chainNetMonDom5,852 chainNetMonDom5,884 chainNetMonDom5,895 chainNetMonDom5,904 chainNetMonDom5,929 chainNetMonDom5,944 chainNetMonDom5,969 chainNetMonDom5,975 chainNetMonDom5,981 chainNetMonDom5,988 chainNetMonDom5,994 chainNetMonDom5,1058 chainNetMonDom5,1063 chainNetMonDom5Viewchain,8 chainNetMonDom5Viewnet,8 chainNetRn6,11 chainNetRn6,102 chainNetRn6,116 chainNetRn6,230 chainNetRn6,238 chainNetRn6,252 chainNetRn6,290 chainNetRn6,313 chainNetRn6,439 chainNetRn6,593 chainNetRn6,628 chainNetRn6,636 chainNetRn6,777 chainNetRn6,855 chainNetRn6,887 chainNetRn6,898 chainNetRn6,907 chainNetRn6,932 chainNetRn6,947 chainNetRn6,972 chainNetRn6,978 chainNetRn6,984 chainNetRn6,991 chainNetRn6,997 chainNetRn6,1061 chainNetRn6,1066 chainNetRn6Viewchain,9 chainNetRn6Viewnet,9 chainRn6,99 chainRn6,113 chainRn6,227 chainRn6,235 chainRn6,249 chainRn6,287 chainRn6,310 chainRn6,436 chainRn6,590 chainRn6,625 chainRn6,633 chainRn6,774 chainRn6,852 chainRn6,884 chainRn6,895 chainRn6,904 chainRn6,929 chainRn6,944 chainRn6,969 chainRn6,975 chainRn6,981 chainRn6,988 chainRn6,994 chainRn6,1058 chainRn6,1063 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 ctgPos2,5 cytoBandIdeo,8 ensGene,6 ensGene,128 est,8 est,23 est,45 est,85 est,129 est,290 est,454 est,468 est,476 est,604 est,709 gap,5 gap,28 gap,50 gap,106 gap,115 gap,153 gap,170 gc5Base,9 gc5Base,22 gc5Base,74 geneid,7 geneid,73 geneid,78 genscan,7 genscan,30 genscan,40 genscan,46 genscan,63 genscan,83 genscan,97 genscan,108 genscan,119 genscan,138 genscan,147 gold,6 gold,42 gold,81 gold,95 gold,101 intronEst,10 intronEst,25 intronEst,86 intronEst,129 intronEst,166 intronEst,210 intronEst,371 intronEst,535 intronEst,549 intronEst,557 intronEst,685 intronEst,790 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,8 mrna,21 mrna,26 mrna,75 mrna,236 mrna,355 mrna,425 ncbiRefSeq,7 ncbiRefSeq,16 ncbiRefSeqCurated,14 ncbiRefSeqGenomicDiff,8 ncbiRefSeqGenomicDiff,13 ncbiRefSeqOther,16 ncbiRefSeqPredicted,12 ncbiRefSeqPsl,8 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netCavPor3,101 netCavPor3,115 netCavPor3,230 netCavPor3,238 netCavPor3,252 netCavPor3,291 netCavPor3,314 netCavPor3,440 netCavPor3,595 netCavPor3,631 netCavPor3,639 netCavPor3,780 netCavPor3,858 netCavPor3,890 netCavPor3,901 netCavPor3,910 netCavPor3,935 netCavPor3,950 netCavPor3,975 netCavPor3,981 netCavPor3,987 netCavPor3,994 netCavPor3,1000 netCavPor3,1064 netCavPor3,1069 netHg19,97 netHg19,111 netHg19,225 netHg19,233 netHg19,247 netHg19,285 netHg19,307 netHg19,433 netHg19,587 netHg19,622 netHg19,630 netHg19,771 netHg19,849 netHg19,881 netHg19,892 netHg19,901 netHg19,926 netHg19,941 netHg19,966 netHg19,972 netHg19,978 netHg19,985 netHg19,991 netHg19,1055 netHg19,1060 netMm10,97 netMm10,111 netMm10,225 netMm10,233 netMm10,247 netMm10,285 netMm10,307 netMm10,433 netMm10,587 netMm10,622 netMm10,630 netMm10,771 netMm10,849 netMm10,881 netMm10,892 netMm10,901 netMm10,926 netMm10,941 netMm10,966 netMm10,972 netMm10,978 netMm10,985 netMm10,991 netMm10,1055 netMm10,1060 netMm39,97 netMm39,111 netMm39,225 netMm39,233 netMm39,247 netMm39,285 netMm39,307 netMm39,433 netMm39,587 netMm39,622 netMm39,630 netMm39,771 netMm39,849 netMm39,881 netMm39,892 netMm39,901 netMm39,926 netMm39,941 netMm39,966 netMm39,972 netMm39,978 netMm39,985 netMm39,991 netMm39,1055 netMm39,1060 netMonDom5,97 netMonDom5,111 netMonDom5,225 netMonDom5,233 netMonDom5,247 netMonDom5,285 netMonDom5,307 netMonDom5,433 netMonDom5,587 netMonDom5,622 netMonDom5,630 netMonDom5,771 netMonDom5,849 netMonDom5,881 netMonDom5,892 netMonDom5,901 netMonDom5,926 netMonDom5,941 netMonDom5,966 netMonDom5,972 netMonDom5,978 netMonDom5,985 netMonDom5,991 netMonDom5,1055 netMonDom5,1060 netRn6,99 netRn6,113 netRn6,227 netRn6,235 netRn6,249 netRn6,287 netRn6,310 netRn6,436 netRn6,590 netRn6,625 netRn6,633 netRn6,774 netRn6,852 netRn6,884 netRn6,895 netRn6,904 netRn6,929 netRn6,944 netRn6,969 netRn6,975 netRn6,981 netRn6,988 netRn6,994 netRn6,1058 netRn6,1063 quality,8 quality,99 refGene,9 refGene,12 refGene,24 refGene,50 refGene,60 refGene,83 refGene,117 refGene,167 refGene,192 refGene,225 refGene,238 refGene,305 refGene,332 refGene,418 refSeqComposite,8 refSeqComposite,21 refSeqComposite,71 refSeqComposite,109 refSeqComposite,119 refSeqComposite,142 refSeqComposite,191 refSeqComposite,202 refSeqComposite,230 refSeqComposite,256 refSeqComposite,264 refSeqComposite,272 refSeqComposite,300 refSeqComposite,364 refSeqComposite,466 refSeqComposite,490 refSeqComposite,571 refSeqComposite,590 refSeqComposite,653 refSeqComposite,663 refSeqComposite,703 refSeqComposite,715 refSeqComposite,801 refSeqComposite,826 refSeqComposite,859 refSeqComposite,879 refSeqComposite,911 refSeqComposite,953 refSeqComposite,969 refSeqComposite,992 refSeqComposite,1007 refSeqComposite,1124 refSeqComposite,1143 refSeqComposite,1169 refSeqComposite,1174 refSeqComposite,1273 refSeqComposite,1368 refSeqComposite,1470 refSeqComposite,1488 refSeqComposite,1628 refSeqComposite,1669 refSeqComposite,1719 refSeqComposite,1805 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 tRNAs,10 tRNAs,33 tRNAs,75 tRNAs,103 tRNAs,175 tRNAs,209 tRNAs,316 tRNAs,331 transMapEnsemblV5,5 transMapEnsemblV5,11 transMapEnsemblV5,43 transMapEnsemblV5,93 transMapEnsemblV5,173 transMapEnsemblV5,198 transMapEnsemblV5,363 transMapEnsemblV5,365 transMapEnsemblV5,389 transMapEnsemblV5,406 transMapEnsemblV5,432 transMapEnsemblV5,463 transMapEnsemblV5,479 transMapEnsemblV5,494 transMapEnsemblV5,551 transMapEnsemblV5,636 transMapEnsemblV5,685 transMapEnsemblV5,699 transMapEnsemblV5,706 transMapEnsemblV5,764 transMapEstV5,9 transMapEstV5,62 transMapEstV5,142 transMapEstV5,167 transMapEstV5,332 transMapEstV5,334 transMapEstV5,358 transMapEstV5,375 transMapEstV5,401 transMapEstV5,432 transMapEstV5,448 transMapEstV5,463 transMapEstV5,520 transMapEstV5,605 transMapEstV5,654 transMapEstV5,668 transMapEstV5,675 transMapEstV5,733 transMapRefSeqV5,10 transMapRefSeqV5,62 transMapRefSeqV5,142 transMapRefSeqV5,167 transMapRefSeqV5,332 transMapRefSeqV5,334 transMapRefSeqV5,358 transMapRefSeqV5,375 transMapRefSeqV5,401 transMapRefSeqV5,432 transMapRefSeqV5,448 transMapRefSeqV5,463 transMapRefSeqV5,520 transMapRefSeqV5,605 transMapRefSeqV5,654 transMapRefSeqV5,668 transMapRefSeqV5,675 transMapRefSeqV5,733 transMapRnaV5,10 transMapRnaV5,62 transMapRnaV5,142 transMapRnaV5,167 transMapRnaV5,332 transMapRnaV5,334 transMapRnaV5,358 transMapRnaV5,375 transMapRnaV5,401 transMapRnaV5,432 transMapRnaV5,448 transMapRnaV5,463 transMapRnaV5,520 transMapRnaV5,605 transMapRnaV5,654 transMapRnaV5,668 transMapRnaV5,675 transMapRnaV5,733 transMapV5,8 transMapV5,16 transMapV5,73 transMapV5,87 transMapV5,138 transMapV5,161 transMapV5,168 transMapV5,248 transMapV5,273 transMapV5,438 transMapV5,440 transMapV5,464 transMapV5,481 transMapV5,507 transMapV5,538 transMapV5,554 transMapV5,569 transMapV5,626 transMapV5,711 transMapV5,760 transMapV5,774 transMapV5,781 transMapV5,839 ucscToINSDC,11 unipAliSwissprot,19 unipAliTrembl,11 unipChain,9 unipConflict,7 unipDisulfBond,7 unipDomain,5 unipInterest,7 unipLocCytopl,6 unipLocExtra,6 unipLocSignal,7 unipLocTransMemb,6 unipModif,8 unipMut,7 unipOther,7 unipRepeat,5 unipStruct,9 uniprot,8 uniprot,17 uniprot,174 uniprot,329 uniprot,345 uniprot,355 uniprot,369 uniprot,378 uniprot,403 uniprot,433 uniprot,439 uniprot,448 uniprot,488 uniprot,517 uniprot,568 uniprot,589 uniprot,611 uniprot,617 uniprot,702 uniprot,761 uniprot,796 uniprot,866 uniprot,926 uniprot,939 uniprot,1122 uniprot,1214 uniprot,1310 uniprot,1342 uniprot,1375 uniprot,1420 uniprot,1465 uniprot,1498 uniprot,1598 uniprot,1617 uniprot,1650 uniprot,1691 uniprot,1790 uniprot,1898 uniprot,1958 uniprot,1970 uniprot,2028 uniprot,2036 xenoMrna,8 xenoMrna,19 xenoMrna,31 xenoMrna,150 xenoMrna,311 xenoMrna,430 xenoMrna,500 xenoRefGene,7 xenoRefGene,16 xenoRefGene,43 xenoRefGene,77 xenoRefGene,127 xenoRefGene,152 xenoRefGene,185 xenoRefGene,198 xenoRefGene,265 xenoRefGene,292 xenoRefGene,377 annot unipOther,2 annotate HLTOGAannotvHg38v1,100 annotated HLTOGAannotvHg38v1,133 refSeqComposite,554 rmsk,67 uniprot,736 uniprot,994 uniprot,1014 uniprot,1027 uniprot,1034 uniprot,1040 uniprot,1053 uniprot,1082 uniprot,1233 uniprot,1265 annotation HLTOGAannotvHg38v1,31 HLTOGAannotvHg38v1,48 HLTOGAannotvHg38v1,358 chainCavPor3,303 chainHg19,296 chainMm10,296 chainMm39,296 chainMonDom5,296 chainNetCavPor3,306 chainNetHg19,298 chainNetMm10,298 chainNetMm39,299 chainNetMonDom5,299 chainNetRn6,301 chainRn6,298 ensGene,165 netCavPor3,303 netHg19,296 netMm10,296 netMm39,296 netMonDom5,296 netRn6,298 refSeqComposite,66 refSeqComposite,664 refSeqComposite,1113 refSeqComposite,1142 refSeqComposite,1188 rmsk,38 transMapEnsemblV5,606 transMapEstV5,575 transMapRefSeqV5,575 transMapRnaV5,575 transMapV5,681 uniprot,143 uniprot,466 uniprot,487 uniprot,530 uniprot,605 uniprot,624 uniprot,1731 annotationonprotein uniprot,1929 annotations HLTOGAannotvHg38v1,5 ensGene,156 genscan,120 ncbiRefSeqOther,6 nestedRepeats,71 refGene,4 refGene,226 refSeqComposite,190 refSeqComposite,196 refSeqComposite,204 refSeqComposite,219 refSeqComposite,348 refSeqComposite,382 refSeqComposite,480 refSeqComposite,860 refSeqComposite,1466 refSeqComposite,1498 refSeqComposite,1534 tRNAs,99 transMapEnsemblV5,60 transMapEnsemblV5,539 transMapEnsemblV5,700 transMapEnsemblV5,708 transMapEstV5,508 transMapEstV5,669 transMapEstV5,677 transMapRefSeqV5,508 transMapRefSeqV5,669 transMapRefSeqV5,677 transMapRnaV5,508 transMapRnaV5,669 transMapRnaV5,677 transMapV5,75 transMapV5,614 transMapV5,775 transMapV5,783 unipOther,5 unipStruct,7 uniprot,6 uniprot,18 uniprot,54 uniprot,96 uniprot,128 uniprot,171 uniprot,212 uniprot,363 uniprot,394 uniprot,397 uniprot,455 uniprot,501 uniprot,595 uniprot,631 uniprot,662 uniprot,704 uniprot,718 uniprot,763 uniprot,1438 uniprot,1504 uniprot,1514 uniprot,1757 xenoRefGene,186 anonymous geneid,58 another refSeqComposite,326 transMapV5,80 any est,313 est,547 intronEst,394 intronEst,628 mrna,259 refSeqComposite,273 refSeqComposite,1351 uniprot,660 uniprot,1146 uniprot,1250 xenoMrna,334 anything tRNAs,118 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 ensGene,109 refSeqComposite,1307 refSeqComposite,1361 transMapEnsemblV5,563 transMapEstV5,532 transMapRefSeqV5,532 transMapRnaV5,532 transMapV5,638 appear tRNAs,326 appending transMapEnsemblV5,396 transMapEstV5,365 transMapRefSeqV5,365 transMapRnaV5,365 transMapV5,471 apply est,185 intronEst,266 mrna,131 xenoMrna,206 approach uniprot,1531 appropriate refGene,150 refSeqComposite,771 xenoRefGene,110 apr HLTOGAannotvHg38v1,366 est,807 geneid,191 genscan,224 intronEst,891 mrna,524 refGene,350 refSeqComposite,1737 tRNAs,504 xenoMrna,599 xenoRefGene,309 april ctgPos2,19 apsects gc5Base,51 arbitrary refSeqComposite,937 archaea tRNAs,104 archive ensGene,142 refSeqComposite,1703 uniprot,893 uniprot,1670 uniprot,1908 archives refSeqComposite,1342 refSeqComposite,1687 uniprot,1832 are HLTOGAannotvHg38v1,204 HLTOGAannotvHg38v1,277 augustusGene,27 chainCavPor3,23 chainCavPor3,42 chainCavPor3,55 chainCavPor3,144 chainCavPor3,213 chainCavPor3,224 chainCavPor3,325 chainCavPor3,394 chainCavPor3,415 chainCavPor3,422 chainCavPor3,505 chainCavPor3,696 chainHg19,21 chainHg19,40 chainHg19,53 chainHg19,140 chainHg19,208 chainHg19,219 chainHg19,318 chainHg19,387 chainHg19,408 chainHg19,415 chainHg19,498 chainHg19,687 chainMm10,21 chainMm10,40 chainMm10,53 chainMm10,140 chainMm10,208 chainMm10,219 chainMm10,318 chainMm10,387 chainMm10,408 chainMm10,415 chainMm10,498 chainMm10,687 chainMm39,21 chainMm39,40 chainMm39,53 chainMm39,140 chainMm39,208 chainMm39,219 chainMm39,318 chainMm39,387 chainMm39,408 chainMm39,415 chainMm39,498 chainMm39,687 chainMonDom5,21 chainMonDom5,40 chainMonDom5,53 chainMonDom5,140 chainMonDom5,208 chainMonDom5,219 chainMonDom5,318 chainMonDom5,387 chainMonDom5,408 chainMonDom5,415 chainMonDom5,498 chainMonDom5,687 chainNetCavPor3,26 chainNetCavPor3,45 chainNetCavPor3,58 chainNetCavPor3,147 chainNetCavPor3,216 chainNetCavPor3,227 chainNetCavPor3,328 chainNetCavPor3,397 chainNetCavPor3,418 chainNetCavPor3,425 chainNetCavPor3,508 chainNetCavPor3,699 chainNetHg19,23 chainNetHg19,42 chainNetHg19,55 chainNetHg19,142 chainNetHg19,210 chainNetHg19,221 chainNetHg19,320 chainNetHg19,389 chainNetHg19,410 chainNetHg19,417 chainNetHg19,500 chainNetHg19,689 chainNetMm10,23 chainNetMm10,42 chainNetMm10,55 chainNetMm10,142 chainNetMm10,210 chainNetMm10,221 chainNetMm10,320 chainNetMm10,389 chainNetMm10,410 chainNetMm10,417 chainNetMm10,500 chainNetMm10,689 chainNetMm39,24 chainNetMm39,43 chainNetMm39,56 chainNetMm39,143 chainNetMm39,211 chainNetMm39,222 chainNetMm39,321 chainNetMm39,390 chainNetMm39,411 chainNetMm39,418 chainNetMm39,501 chainNetMm39,690 chainNetMonDom5,24 chainNetMonDom5,43 chainNetMonDom5,56 chainNetMonDom5,143 chainNetMonDom5,211 chainNetMonDom5,222 chainNetMonDom5,321 chainNetMonDom5,390 chainNetMonDom5,411 chainNetMonDom5,418 chainNetMonDom5,501 chainNetMonDom5,690 chainNetRn6,25 chainNetRn6,44 chainNetRn6,57 chainNetRn6,145 chainNetRn6,213 chainNetRn6,224 chainNetRn6,324 chainNetRn6,393 chainNetRn6,414 chainNetRn6,421 chainNetRn6,504 chainNetRn6,693 chainRn6,22 chainRn6,41 chainRn6,54 chainRn6,142 chainRn6,210 chainRn6,221 chainRn6,321 chainRn6,390 chainRn6,411 chainRn6,418 chainRn6,501 chainRn6,690 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ctgPos2,34 ensGene,81 ensGene,121 est,27 est,64 est,146 est,156 gap,16 gap,84 gap,129 gap,148 gap,172 geneid,76 geneid,90 geneid,96 genscan,25 genscan,160 gold,50 gold,73 gold,90 gold,130 intronEst,39 intronEst,227 intronEst,237 intronEst,800 microsat,16 microsat,25 microsat,52 mrna,45 mrna,92 mrna,102 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netCavPor3,23 netCavPor3,42 netCavPor3,55 netCavPor3,144 netCavPor3,213 netCavPor3,224 netCavPor3,325 netCavPor3,394 netCavPor3,415 netCavPor3,422 netCavPor3,505 netCavPor3,696 netHg19,21 netHg19,40 netHg19,53 netHg19,140 netHg19,208 netHg19,219 netHg19,318 netHg19,387 netHg19,408 netHg19,415 netHg19,498 netHg19,687 netMm10,21 netMm10,40 netMm10,53 netMm10,140 netMm10,208 netMm10,219 netMm10,318 netMm10,387 netMm10,408 netMm10,415 netMm10,498 netMm10,687 netMm39,21 netMm39,40 netMm39,53 netMm39,140 netMm39,208 netMm39,219 netMm39,318 netMm39,387 netMm39,408 netMm39,415 netMm39,498 netMm39,687 netMonDom5,21 netMonDom5,40 netMonDom5,53 netMonDom5,140 netMonDom5,208 netMonDom5,219 netMonDom5,318 netMonDom5,387 netMonDom5,408 netMonDom5,415 netMonDom5,498 netMonDom5,687 netRn6,22 netRn6,41 netRn6,54 netRn6,142 netRn6,210 netRn6,221 netRn6,321 netRn6,390 netRn6,411 netRn6,418 netRn6,501 netRn6,690 refGene,41 refGene,143 refGene,241 refSeqComposite,179 refSeqComposite,232 refSeqComposite,406 refSeqComposite,427 refSeqComposite,764 refSeqComposite,889 refSeqComposite,931 refSeqComposite,995 refSeqComposite,1022 refSeqComposite,1338 refSeqComposite,1372 refSeqComposite,1395 refSeqComposite,1473 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 tRNAs,105 tRNAs,168 tRNAs,190 tRNAs,202 tRNAs,262 tRNAs,266 tRNAs,292 tRNAs,297 tRNAs,333 transMapEnsemblV5,55 transMapEnsemblV5,73 transMapEnsemblV5,451 transMapEnsemblV5,458 transMapEnsemblV5,467 transMapEnsemblV5,501 transMapEnsemblV5,511 transMapEnsemblV5,540 transMapEnsemblV5,579 transMapEstV5,42 transMapEstV5,420 transMapEstV5,427 transMapEstV5,436 transMapEstV5,470 transMapEstV5,480 transMapEstV5,509 transMapEstV5,548 transMapRefSeqV5,42 transMapRefSeqV5,420 transMapRefSeqV5,427 transMapRefSeqV5,436 transMapRefSeqV5,470 transMapRefSeqV5,480 transMapRefSeqV5,509 transMapRefSeqV5,548 transMapRnaV5,42 transMapRnaV5,420 transMapRnaV5,427 transMapRnaV5,436 transMapRnaV5,470 transMapRnaV5,480 transMapRnaV5,509 transMapRnaV5,548 transMapV5,41 transMapV5,68 transMapV5,526 transMapV5,533 transMapV5,542 transMapV5,576 transMapV5,586 transMapV5,615 transMapV5,654 uniprot,55 uniprot,93 uniprot,124 uniprot,146 uniprot,165 uniprot,175 uniprot,208 uniprot,456 uniprot,502 uniprot,555 uniprot,579 uniprot,596 uniprot,644 uniprot,679 uniprot,735 uniprot,868 uniprot,880 uniprot,1006 uniprot,1013 uniprot,1033 uniprot,1061 uniprot,1086 uniprot,1117 uniprot,1149 uniprot,1318 uniprot,1350 uniprot,1425 uniprot,1433 uniprot,1454 uniprot,1659 uniprot,1867 uniprot,1895 xenoMrna,50 xenoMrna,116 xenoMrna,167 xenoMrna,177 xenoRefGene,38 xenoRefGene,103 xenoRefGene,201 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5Base,37 arian chainCavPor3,948 chainHg19,939 chainMm10,939 chainMm39,939 chainMonDom5,939 chainNetCavPor3,951 chainNetHg19,941 chainNetMm10,941 chainNetMm39,942 chainNetMonDom5,942 chainNetRn6,945 chainRn6,942 nestedRepeats,305 netCavPor3,948 netHg19,939 netMm10,939 netMm39,939 netMonDom5,939 netRn6,942 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrays geneid,86 arrows nestedRepeats,145 nestedRepeats,163 articles refSeqComposite,1101 tRNAs,365 as HLTOGAannotvHg38v1,9 HLTOGAannotvHg38v1,37 HLTOGAannotvHg38v1,42 HLTOGAannotvHg38v1,141 HLTOGAannotvHg38v1,199 HLTOGAannotvHg38v1,259 augustusGene,77 augustusGene,79 chainCavPor3,467 chainCavPor3,507 chainCavPor3,530 chainCavPor3,545 chainCavPor3,807 chainCavPor3,862 chainCavPor3,920 chainHg19,460 chainHg19,500 chainHg19,523 chainHg19,538 chainHg19,798 chainHg19,853 chainHg19,911 chainMm10,460 chainMm10,500 chainMm10,523 chainMm10,538 chainMm10,798 chainMm10,853 chainMm10,911 chainMm39,460 chainMm39,500 chainMm39,523 chainMm39,538 chainMm39,798 chainMm39,853 chainMm39,911 chainMonDom5,460 chainMonDom5,500 chainMonDom5,523 chainMonDom5,538 chainMonDom5,798 chainMonDom5,853 chainMonDom5,911 chainNetCavPor3,470 chainNetCavPor3,510 chainNetCavPor3,533 chainNetCavPor3,548 chainNetCavPor3,810 chainNetCavPor3,865 chainNetCavPor3,923 chainNetHg19,462 chainNetHg19,502 chainNetHg19,525 chainNetHg19,540 chainNetHg19,800 chainNetHg19,855 chainNetHg19,913 chainNetMm10,462 chainNetMm10,502 chainNetMm10,525 chainNetMm10,540 chainNetMm10,800 chainNetMm10,855 chainNetMm10,913 chainNetMm39,463 chainNetMm39,503 chainNetMm39,526 chainNetMm39,541 chainNetMm39,801 chainNetMm39,856 chainNetMm39,914 chainNetMonDom5,463 chainNetMonDom5,503 chainNetMonDom5,526 chainNetMonDom5,541 chainNetMonDom5,801 chainNetMonDom5,856 chainNetMonDom5,914 chainNetRn6,466 chainNetRn6,506 chainNetRn6,529 chainNetRn6,544 chainNetRn6,804 chainNetRn6,859 chainNetRn6,917 chainRn6,463 chainRn6,503 chainRn6,526 chainRn6,541 chainRn6,801 chainRn6,856 chainRn6,914 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 ensGene,87 est,594 gap,18 geneid,98 genscan,35 genscan,37 gold,35 intronEst,675 microsat,21 nestedRepeats,125 netCavPor3,467 netCavPor3,507 netCavPor3,530 netCavPor3,545 netCavPor3,807 netCavPor3,862 netCavPor3,920 netHg19,460 netHg19,500 netHg19,523 netHg19,538 netHg19,798 netHg19,853 netHg19,911 netMm10,460 netMm10,500 netMm10,523 netMm10,538 netMm10,798 netMm10,853 netMm10,911 netMm39,460 netMm39,500 netMm39,523 netMm39,538 netMm39,798 netMm39,853 netMm39,911 netMonDom5,460 netMonDom5,500 netMonDom5,523 netMonDom5,538 netMonDom5,798 netMonDom5,853 netMonDom5,911 netRn6,463 netRn6,503 netRn6,526 netRn6,541 netRn6,801 netRn6,856 netRn6,914 quality,90 refSeqComposite,413 refSeqComposite,502 refSeqComposite,522 refSeqComposite,535 refSeqComposite,622 refSeqComposite,890 refSeqComposite,1219 refSeqComposite,1400 refSeqComposite,1516 refSeqComposite,1636 rmsk,53 rmsk,55 tRNAs,42 tRNAs,288 transMapEnsemblV5,65 transMapEnsemblV5,187 transMapEnsemblV5,213 transMapEnsemblV5,225 transMapEnsemblV5,513 transMapEnsemblV5,624 transMapEstV5,156 transMapEstV5,182 transMapEstV5,194 transMapEstV5,482 transMapEstV5,593 transMapRefSeqV5,156 transMapRefSeqV5,182 transMapRefSeqV5,194 transMapRefSeqV5,482 transMapRefSeqV5,593 transMapRnaV5,156 transMapRnaV5,182 transMapRnaV5,194 transMapRnaV5,482 transMapRnaV5,593 transMapV5,262 transMapV5,288 transMapV5,300 transMapV5,588 transMapV5,699 uniprot,307 uniprot,598 uniprot,600 uniprot,621 uniprot,1100 uniprot,1778 xenoMrna,123 xenoMrna,128 ascii uniprot,1762 ask refGene,63 refSeqComposite,122 aspect refSeqComposite,705 aspects quality,66 assembled geneid,131 geneid,140 gold,23 assemblies augustusGene,196 augustusGene,237 chainCavPor3,324 chainCavPor3,587 chainHg19,317 chainHg19,579 chainMm10,317 chainMm10,579 chainMm39,317 chainMm39,579 chainMonDom5,317 chainMonDom5,579 chainNetCavPor3,327 chainNetCavPor3,590 chainNetHg19,319 chainNetHg19,581 chainNetMm10,319 chainNetMm10,581 chainNetMm39,320 chainNetMm39,582 chainNetMonDom5,320 chainNetMonDom5,582 chainNetRn6,323 chainNetRn6,585 chainRn6,320 chainRn6,582 netCavPor3,324 netCavPor3,587 netHg19,317 netHg19,579 netMm10,317 netMm10,579 netMm39,317 netMm39,579 netMonDom5,317 netMonDom5,579 netRn6,320 netRn6,582 refSeqComposite,183 rmsk,107 transMapEnsemblV5,192 transMapEstV5,161 transMapRefSeqV5,161 transMapRnaV5,161 transMapV5,267 assembly HLTOGAannotvHg38v1,209 augustusGene,197 chainCavPor3,154 chainCavPor3,161 chainCavPor3,311 chainHg19,149 chainHg19,156 chainHg19,304 chainMm10,149 chainMm10,156 chainMm10,304 chainMm39,149 chainMm39,156 chainMm39,304 chainMonDom5,149 chainMonDom5,156 chainMonDom5,304 chainNetCavPor3,157 chainNetCavPor3,164 chainNetCavPor3,314 chainNetHg19,151 chainNetHg19,158 chainNetHg19,306 chainNetMm10,151 chainNetMm10,158 chainNetMm10,306 chainNetMm39,152 chainNetMm39,159 chainNetMm39,307 chainNetMonDom5,152 chainNetMonDom5,159 chainNetMonDom5,307 chainNetRn6,154 chainNetRn6,161 chainNetRn6,310 chainRn6,151 chainRn6,158 chainRn6,307 ctgPos2,2 ctgPos2,24 gap,14 gap,64 gap,93 gap,160 gap,187 gold,1 gold,2 gold,14 gold,157 netCavPor3,154 netCavPor3,161 netCavPor3,311 netHg19,149 netHg19,156 netHg19,304 netMm10,149 netMm10,156 netMm10,304 netMm39,149 netMm39,156 netMm39,304 netMonDom5,149 netMonDom5,156 netMonDom5,304 netRn6,151 netRn6,158 netRn6,307 quality,25 quality,95 refSeqComposite,370 refSeqComposite,476 transMapV5,105 transMapV5,123 transMapV5,134 ucscToINSDC,40 uniprot,445 uniprot,701 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assessing refSeqComposite,649 assigned transMapEnsemblV5,459 transMapEstV5,428 transMapRefSeqV5,428 transMapRnaV5,428 transMapV5,534 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 est,107 gc5Base,34 intronEst,188 refSeqComposite,1396 rmsk,224 simpleRepeat,51 transMapEnsemblV5,580 transMapEstV5,549 transMapRefSeqV5,549 transMapRnaV5,549 transMapV5,655 uniprot,787 associates ucscToINSDC,16 association refSeqComposite,681 astashyn refGene,366 refSeqComposite,1753 xenoRefGene,325 at HLTOGAannotvHg38v1,362 blastHg18KG,125 chainCavPor3,424 chainCavPor3,802 chainCavPor3,924 chainCavPor3,959 chainCavPor3,964 chainCavPor3,1005 chainHg19,417 chainHg19,793 chainHg19,915 chainHg19,950 chainHg19,955 chainHg19,996 chainMm10,417 chainMm10,793 chainMm10,915 chainMm10,950 chainMm10,955 chainMm10,996 chainMm39,417 chainMm39,793 chainMm39,915 chainMm39,950 chainMm39,955 chainMm39,996 chainMonDom5,417 chainMonDom5,793 chainMonDom5,915 chainMonDom5,950 chainMonDom5,955 chainMonDom5,996 chainNetCavPor3,427 chainNetCavPor3,805 chainNetCavPor3,927 chainNetCavPor3,962 chainNetCavPor3,967 chainNetCavPor3,1008 chainNetHg19,419 chainNetHg19,795 chainNetHg19,917 chainNetHg19,952 chainNetHg19,957 chainNetHg19,998 chainNetMm10,419 chainNetMm10,795 chainNetMm10,917 chainNetMm10,952 chainNetMm10,957 chainNetMm10,998 chainNetMm39,420 chainNetMm39,796 chainNetMm39,918 chainNetMm39,953 chainNetMm39,958 chainNetMm39,999 chainNetMonDom5,420 chainNetMonDom5,796 chainNetMonDom5,918 chainNetMonDom5,953 chainNetMonDom5,958 chainNetMonDom5,999 chainNetRn6,423 chainNetRn6,799 chainNetRn6,921 chainNetRn6,956 chainNetRn6,961 chainNetRn6,1002 chainRn6,420 chainRn6,796 chainRn6,918 chainRn6,953 chainRn6,958 chainRn6,999 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 est,262 est,546 est,591 est,710 est,726 intronEst,65 intronEst,80 intronEst,105 intronEst,343 intronEst,627 intronEst,672 intronEst,791 intronEst,810 microsat,28 microsat,77 mrna,208 mrna,426 mrna,443 netCavPor3,424 netCavPor3,802 netCavPor3,924 netCavPor3,959 netCavPor3,964 netCavPor3,1005 netHg19,417 netHg19,793 netHg19,915 netHg19,950 netHg19,955 netHg19,996 netMm10,417 netMm10,793 netMm10,915 netMm10,950 netMm10,955 netMm10,996 netMm39,417 netMm39,793 netMm39,915 netMm39,950 netMm39,955 netMm39,996 netMonDom5,417 netMonDom5,793 netMonDom5,915 netMonDom5,950 netMonDom5,955 netMonDom5,996 netRn6,420 netRn6,796 netRn6,918 netRn6,953 netRn6,958 netRn6,999 quality,28 refGene,131 refGene,306 refGene,322 refSeqComposite,731 refSeqComposite,1046 refSeqComposite,1150 refSeqComposite,1274 refSeqComposite,1711 rmsk,243 rmsk,267 tRNAs,107 tRNAs,339 transMapEnsemblV5,293 transMapEnsemblV5,681 transMapEstV5,262 transMapEstV5,650 transMapRefSeqV5,262 transMapRefSeqV5,650 transMapRnaV5,262 transMapRnaV5,650 transMapV5,117 transMapV5,368 transMapV5,756 ucscToINSDC,3 uniprot,825 uniprot,1946 uniprot,1991 xenoMrna,283 xenoMrna,501 xenoMrna,518 xenoRefGene,91 xenoRefGene,266 xenoRefGene,282 attempt est,578 intronEst,659 atypical tRNAs,274 aug tRNAs,433 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 uniprot,835 uniprot,867 automated transMapEnsemblV5,536 transMapEstV5,505 transMapRefSeqV5,505 transMapRnaV5,505 transMapV5,611 uniprot,1468 uniprot,1727 automatically uniprot,1565 av uniprot,2015 available HLTOGAannotvHg38v1,329 augustusGene,239 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 ensGene,82 ensGene,122 nestedRepeats,259 nestedRepeats,276 refSeqComposite,180 refSeqComposite,276 refSeqComposite,473 refSeqComposite,565 refSeqComposite,650 refSeqComposite,1339 refSeqComposite,1591 rmsk,73 tRNAs,106 transMapEnsemblV5,188 transMapEnsemblV5,245 transMapEstV5,157 transMapEstV5,214 transMapRefSeqV5,157 transMapRefSeqV5,214 transMapRnaV5,157 transMapRnaV5,214 transMapV5,263 transMapV5,320 uniprot,881 uniprot,1660 uniprot,1981 average nestedRepeats,186 nestedRepeats,221 averaged quality,51 aw HLTOGAannotvHg38v1,349 aware uniprot,1456 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainCavPor3,608 chainCavPor3,615 chainHg19,600 chainHg19,607 chainMm10,600 chainMm10,607 chainMm39,600 chainMm39,607 chainMonDom5,600 chainMonDom5,607 chainNetCavPor3,611 chainNetCavPor3,618 chainNetHg19,602 chainNetHg19,609 chainNetMm10,602 chainNetMm10,609 chainNetMm39,603 chainNetMm39,610 chainNetMonDom5,603 chainNetMonDom5,610 chainNetRn6,606 chainNetRn6,613 chainRn6,603 chainRn6,610 netCavPor3,608 netCavPor3,615 netHg19,600 netHg19,607 netMm10,600 netMm10,607 netMm39,600 netMm39,607 netMonDom5,600 netMonDom5,607 netRn6,603 netRn6,610 axtchain chainCavPor3,620 chainCavPor3,707 chainCavPor3,955 chainHg19,612 chainHg19,698 chainHg19,946 chainMm10,612 chainMm10,698 chainMm10,946 chainMm39,612 chainMm39,698 chainMm39,946 chainMonDom5,612 chainMonDom5,698 chainMonDom5,946 chainNetCavPor3,623 chainNetCavPor3,710 chainNetCavPor3,958 chainNetHg19,614 chainNetHg19,700 chainNetHg19,948 chainNetMm10,614 chainNetMm10,700 chainNetMm10,948 chainNetMm39,615 chainNetMm39,701 chainNetMm39,949 chainNetMonDom5,615 chainNetMonDom5,701 chainNetMonDom5,949 chainNetRn6,618 chainNetRn6,704 chainNetRn6,952 chainRn6,615 chainRn6,701 chainRn6,949 netCavPor3,620 netCavPor3,707 netCavPor3,955 netHg19,612 netHg19,698 netHg19,946 netMm10,612 netMm10,698 netMm10,946 netMm39,612 netMm39,698 netMm39,946 netMonDom5,612 netMonDom5,698 netMonDom5,946 netRn6,615 netRn6,701 netRn6,949 b tRNAs,36 transMapEnsemblV5,717 transMapEnsemblV5,727 transMapEstV5,686 transMapEstV5,696 transMapRefSeqV5,686 transMapRefSeqV5,696 transMapRnaV5,686 transMapRnaV5,696 transMapV5,792 transMapV5,802 back chainCavPor3,600 chainHg19,592 chainMm10,592 chainMm39,592 chainMonDom5,592 chainNetCavPor3,603 chainNetHg19,594 chainNetMm10,594 chainNetMm39,595 chainNetMonDom5,595 chainNetRn6,598 chainRn6,595 netCavPor3,600 netHg19,592 netMm10,592 netMm39,592 netMonDom5,592 netRn6,595 bacteria tRNAs,102 baertsch augustusGene,290 chainCavPor3,993 chainCavPor3,1051 chainCavPor3,1097 chainHg19,984 chainHg19,1042 chainHg19,1088 chainMm10,984 chainMm10,1042 chainMm10,1088 chainMm39,984 chainMm39,1042 chainMm39,1088 chainMonDom5,984 chainMonDom5,1042 chainMonDom5,1088 chainNetCavPor3,996 chainNetCavPor3,1054 chainNetCavPor3,1100 chainNetHg19,986 chainNetHg19,1044 chainNetHg19,1090 chainNetMm10,986 chainNetMm10,1044 chainNetMm10,1090 chainNetMm39,987 chainNetMm39,1045 chainNetMm39,1091 chainNetMonDom5,987 chainNetMonDom5,1045 chainNetMonDom5,1091 chainNetRn6,990 chainNetRn6,1048 chainNetRn6,1094 chainRn6,987 chainRn6,1045 chainRn6,1091 netCavPor3,993 netCavPor3,1051 netCavPor3,1097 netHg19,984 netHg19,1042 netHg19,1088 netMm10,984 netMm10,1042 netMm10,1088 netMm39,984 netMm39,1042 netMm39,1088 netMonDom5,984 netMonDom5,1042 netMonDom5,1088 netRn6,987 netRn6,1045 netRn6,1091 transMapEnsemblV5,758 transMapEstV5,727 transMapRefSeqV5,727 transMapRnaV5,727 transMapV5,833 bairoch uniprot,2022 band cytoBandIdeo,2 barcelona geneid,46 barker ensGene,170 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 est,383 est,417 est,693 est,701 est,713 intronEst,464 intronEst,498 intronEst,774 intronEst,782 intronEst,794 mrna,356 mrna,409 mrna,417 mrna,429 quality,22 quality,39 refGene,289 refGene,297 refGene,309 refSeqComposite,1257 refSeqComposite,1265 refSeqComposite,1277 rmsk,217 rmsk,219 rmsk,222 xenoMrna,431 xenoMrna,483 xenoMrna,492 xenoMrna,504 xenoRefGene,249 xenoRefGene,257 xenoRefGene,269 base-level transMapEnsemblV5,319 transMapEstV5,288 transMapRefSeqV5,288 transMapRnaV5,288 transMapV5,394 based augustusGene,28 chainCavPor3,327 chainCavPor3,353 chainHg19,320 chainHg19,346 chainMm10,320 chainMm10,346 chainMm39,320 chainMm39,346 chainMonDom5,320 chainMonDom5,346 chainNetCavPor3,330 chainNetCavPor3,356 chainNetHg19,322 chainNetHg19,348 chainNetMm10,322 chainNetMm10,348 chainNetMm39,323 chainNetMm39,349 chainNetMonDom5,323 chainNetMonDom5,349 chainNetRn6,326 chainNetRn6,352 chainRn6,323 chainRn6,349 genscan,26 gold,51 netCavPor3,327 netCavPor3,353 netHg19,320 netHg19,346 netMm10,320 netMm10,346 netMm39,320 netMm39,346 netMonDom5,320 netMonDom5,346 netRn6,323 netRn6,349 refSeqComposite,251 refSeqComposite,359 tRNAs,268 uniprot,60 uniprot,727 uniprot,1604 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 ctgPos2,47 ctgPos2,55 est,33 est,394 est,666 gc5Base,25 intronEst,45 intronEst,83 intronEst,475 intronEst,747 refSeqComposite,897 transMapV5,165 basic blastHg18KG,163 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 uniprot,1570 bc149621.1 transMapEnsemblV5,456 transMapEstV5,425 transMapRefSeqV5,425 transMapRnaV5,425 transMapV5,531 bc149621.1-1 transMapEnsemblV5,462 transMapEnsemblV5,473 transMapEstV5,431 transMapEstV5,442 transMapRefSeqV5,431 transMapRefSeqV5,442 transMapRnaV5,431 transMapRnaV5,442 transMapV5,537 transMapV5,548 bc149621.1-1.1 transMapEnsemblV5,484 transMapEstV5,453 transMapRefSeqV5,453 transMapRnaV5,453 transMapV5,559 bc149621.1-2 transMapEnsemblV5,464 transMapEnsemblV5,486 transMapEstV5,433 transMapEstV5,455 transMapRefSeqV5,433 transMapRefSeqV5,455 transMapRnaV5,433 transMapRnaV5,455 transMapV5,539 transMapV5,561 bc149621.1-2.1 transMapEnsemblV5,493 transMapEstV5,462 transMapRefSeqV5,462 transMapRnaV5,462 transMapV5,568 bc149621.1-2.2 transMapEnsemblV5,495 transMapEstV5,464 transMapRefSeqV5,464 transMapRnaV5,464 transMapV5,570 be augustusGene,99 chainCavPor3,110 chainCavPor3,434 chainHg19,106 chainHg19,427 chainMm10,106 chainMm10,427 chainMm39,106 chainMm39,427 chainMonDom5,106 chainMonDom5,427 chainNetCavPor3,113 chainNetCavPor3,437 chainNetHg19,108 chainNetHg19,429 chainNetMm10,108 chainNetMm10,429 chainNetMm39,109 chainNetMm39,430 chainNetMonDom5,109 chainNetMonDom5,430 chainNetRn6,111 chainNetRn6,433 chainRn6,108 chainRn6,430 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 ensGene,61 ensGene,104 ensGene,138 est,106 est,119 est,141 est,250 est,260 est,271 est,302 est,320 est,330 est,379 est,430 est,526 est,634 gc5Base,41 intronEst,56 intronEst,79 intronEst,187 intronEst,200 intronEst,222 intronEst,331 intronEst,341 intronEst,352 intronEst,383 intronEst,401 intronEst,411 intronEst,460 intronEst,511 intronEst,607 intronEst,715 microsat,19 microsat,39 mrna,65 mrna,87 mrna,196 mrna,206 mrna,217 mrna,248 mrna,266 mrna,276 mrna,325 mrna,369 nestedRepeats,269 nestedRepeats,291 netCavPor3,110 netCavPor3,434 netHg19,106 netHg19,427 netMm10,106 netMm10,427 netMm39,106 netMm39,427 netMonDom5,106 netMonDom5,427 netRn6,108 netRn6,430 quality,56 refGene,126 refSeqComposite,303 refSeqComposite,725 refSeqComposite,935 refSeqComposite,966 refSeqComposite,1026 refSeqComposite,1103 refSeqComposite,1191 refSeqComposite,1294 refSeqComposite,1301 refSeqComposite,1317 refSeqComposite,1389 refSeqComposite,1449 refSeqComposite,1480 refSeqComposite,1500 refSeqComposite,1508 refSeqComposite,1582 refSeqComposite,1604 refSeqComposite,1674 refSeqComposite,1699 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 tRNAs,128 tRNAs,220 tRNAs,227 transMapEnsemblV5,63 transMapEnsemblV5,109 transMapEnsemblV5,144 transMapEnsemblV5,524 transMapEnsemblV5,553 transMapEnsemblV5,608 transMapEnsemblV5,616 transMapEnsemblV5,639 transMapEnsemblV5,646 transMapEstV5,78 transMapEstV5,113 transMapEstV5,493 transMapEstV5,522 transMapEstV5,577 transMapEstV5,585 transMapEstV5,608 transMapEstV5,615 transMapRefSeqV5,78 transMapRefSeqV5,113 transMapRefSeqV5,493 transMapRefSeqV5,522 transMapRefSeqV5,577 transMapRefSeqV5,585 transMapRefSeqV5,608 transMapRefSeqV5,615 transMapRnaV5,78 transMapRnaV5,113 transMapRnaV5,493 transMapRnaV5,522 transMapRnaV5,577 transMapRnaV5,585 transMapRnaV5,608 transMapRnaV5,615 transMapV5,184 transMapV5,219 transMapV5,599 transMapV5,628 transMapV5,683 transMapV5,691 transMapV5,714 transMapV5,721 uniprot,181 uniprot,246 uniprot,1094 uniprot,1105 uniprot,1143 uniprot,1197 uniprot,1270 uniprot,1327 uniprot,1556 uniprot,1694 uniprot,1715 uniprot,1740 uniprot,1750 uniprot,1759 uniprot,1770 uniprot,1793 uniprot,1800 uniprot,1882 xenoMrna,140 xenoMrna,162 xenoMrna,271 xenoMrna,281 xenoMrna,292 xenoMrna,323 xenoMrna,341 xenoMrna,351 xenoMrna,400 xenoMrna,444 xenoRefGene,86 bears est,91 intronEst,172 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 est,626 intronEst,707 uniprot,674 xenoMrna,102 been chainCavPor3,575 chainHg19,568 chainMm10,568 chainMm39,568 chainMonDom5,568 chainNetCavPor3,578 chainNetHg19,570 chainNetMm10,570 chainNetMm39,571 chainNetMonDom5,571 chainNetRn6,574 chainRn6,571 ctgPos2,28 intronEst,7 nestedRepeats,89 netCavPor3,575 netHg19,568 netMm10,568 netMm39,568 netMonDom5,568 netRn6,571 refSeqComposite,635 refSeqComposite,673 refSeqComposite,683 refSeqComposite,698 rmsk,70 rmsk,109 uniprot,34 uniprot,47 uniprot,303 uniprot,1043 before chainCavPor3,909 chainHg19,900 chainMm10,900 chainMm39,900 chainMonDom5,900 chainNetCavPor3,912 chainNetHg19,902 chainNetMm10,902 chainNetMm39,903 chainNetMonDom5,903 chainNetRn6,906 chainRn6,903 est,563 intronEst,644 netCavPor3,909 netHg19,900 netMm10,900 netMm39,900 netMonDom5,900 netRn6,903 uniprot,934 begin refSeqComposite,222 refSeqComposite,351 beginning gap,162 refSeqComposite,1048 refSeqComposite,1645 beloow refSeqComposite,337 below chainCavPor3,683 chainHg19,674 chainMm10,674 chainMm39,674 chainMonDom5,674 chainNetCavPor3,686 chainNetHg19,676 chainNetMm10,676 chainNetMm39,677 chainNetMonDom5,677 chainNetRn6,680 chainRn6,677 ensGene,54 genscan,154 genscan,168 nestedRepeats,68 netCavPor3,683 netHg19,674 netMm10,674 netMm39,674 netMonDom5,674 netRn6,677 refSeqComposite,1391 refSeqComposite,1528 rmsk,104 tRNAs,179 uniprot,73 uniprot,92 uniprot,189 uniprot,207 uniprot,769 uniprot,898 benson est,743 est,771 intronEst,827 intronEst,855 microsat,102 microsat,112 microsat,114 mrna,460 mrna,488 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 xenoMrna,535 xenoMrna,563 best blastHg18KG,100 chainCavPor3,270 chainCavPor3,517 chainHg19,265 chainHg19,510 chainMm10,265 chainMm10,510 chainMm39,265 chainMm39,510 chainMonDom5,265 chainMonDom5,510 chainNetCavPor3,273 chainNetCavPor3,520 chainNetHg19,267 chainNetHg19,512 chainNetMm10,267 chainNetMm10,512 chainNetMm39,268 chainNetMm39,513 chainNetMonDom5,268 chainNetMonDom5,513 chainNetRn6,270 chainNetRn6,516 chainRn6,267 chainRn6,513 est,708 intronEst,789 mrna,424 netCavPor3,270 netCavPor3,517 netHg19,265 netHg19,510 netMm10,265 netMm10,510 netMm39,265 netMm39,510 netMonDom5,265 netMonDom5,510 netRn6,267 netRn6,513 refGene,304 refSeqComposite,1272 transMapEnsemblV5,240 transMapEstV5,209 transMapRefSeqV5,209 transMapRnaV5,209 transMapV5,66 transMapV5,315 uniprot,1074 uniprot,1415 xenoMrna,499 xenoRefGene,264 beta uniprot,364 better est,71 mrna,52 tRNAs,254 xenoMrna,57 between HLTOGAannotvHg38v1,66 chainCavPor3,53 chainCavPor3,625 chainCavPor3,856 chainHg19,51 chainHg19,617 chainHg19,847 chainMm10,51 chainMm10,617 chainMm10,847 chainMm39,51 chainMm39,617 chainMm39,847 chainMonDom5,51 chainMonDom5,617 chainMonDom5,847 chainNetCavPor3,56 chainNetCavPor3,628 chainNetCavPor3,859 chainNetHg19,53 chainNetHg19,619 chainNetHg19,849 chainNetMm10,53 chainNetMm10,619 chainNetMm10,849 chainNetMm39,54 chainNetMm39,620 chainNetMm39,850 chainNetMonDom5,54 chainNetMonDom5,620 chainNetMonDom5,850 chainNetRn6,55 chainNetRn6,623 chainNetRn6,853 chainRn6,52 chainRn6,620 chainRn6,850 est,15 est,82 gap,74 gap,138 gold,45 gold,87 gold,92 intronEst,17 intronEst,74 intronEst,163 mrna,16 ncbiRefSeqGenomicDiff,4 netCavPor3,53 netCavPor3,625 netCavPor3,856 netHg19,51 netHg19,617 netHg19,847 netMm10,51 netMm10,617 netMm10,847 netMm39,51 netMm39,617 netMm39,847 netMonDom5,51 netMonDom5,617 netMonDom5,847 netRn6,52 netRn6,620 netRn6,850 refSeqComposite,64 refSeqComposite,460 refSeqComposite,874 tRNAs,199 uniprot,375 uniprot,922 uniprot,1371 uniprot,1615 bias uniprot,400 bigbed refSeqComposite,1375 refSeqComposite,1386 refSeqComposite,1476 uniprot,1736 bigbedtobed refSeqComposite,1505 refSeqComposite,1545 transMapEnsemblV5,613 transMapEnsemblV5,658 transMapEstV5,582 transMapEstV5,627 transMapRefSeqV5,582 transMapRefSeqV5,627 transMapRnaV5,582 transMapRnaV5,627 transMapV5,688 transMapV5,733 uniprot,1767 uniprot,1812 bigpsl transMapEnsemblV5,543 transMapEstV5,512 transMapRefSeqV5,512 transMapRnaV5,512 transMapV5,618 bin refSeqComposite,1431 refSeqComposite,1461 binaries transMapEnsemblV5,637 transMapEstV5,606 transMapRefSeqV5,606 transMapRnaV5,606 transMapV5,712 uniprot,1791 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 refSeqComposite,1519 transMapEnsemblV5,627 transMapEstV5,596 transMapRefSeqV5,596 transMapRnaV5,596 transMapV5,702 uniprot,1781 biochemical tRNAs,271 biocomput chainCavPor3,1044 chainHg19,1035 chainMm10,1035 chainMm39,1035 chainMonDom5,1035 chainNetCavPor3,1047 chainNetHg19,1037 chainNetMm10,1037 chainNetMm39,1038 chainNetMonDom5,1038 chainNetRn6,1041 chainRn6,1038 netCavPor3,1044 netHg19,1035 netMm10,1035 netMm39,1035 netMonDom5,1035 netRn6,1038 bioinformatics augustusGene,307 augustusGene,332 geneid,169 transMapEnsemblV5,775 transMapEstV5,744 transMapRefSeqV5,744 transMapRnaV5,744 transMapV5,850 biol blastHg18KG,170 cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,222 tRNAs,431 transMapEnsemblV5,810 transMapEstV5,779 transMapRefSeqV5,779 transMapRnaV5,779 transMapV5,885 biological uniprot,320 biology geneid,27 geneid,146 genscan,200 birds HLTOGAannotvHg38v1,60 augustusGene,203 birney ensGene,172 bits tRNAs,124 tRNAs,167 tRNAs,201 black gap,19 gap,58 blanco geneid,155 geneid,180 blast blastHg18KG,144 blastHg18KG,151 uniprot,949 uniprot,1084 uniprot,1115 blast-like est,801 intronEst,885 mrna,518 refGene,344 refSeqComposite,1731 xenoMrna,593 xenoRefGene,303 blastz chainCavPor3,921 chainCavPor3,1108 chainHg19,912 chainHg19,1099 chainMm10,912 chainMm10,1099 chainMm39,912 chainMm39,1099 chainMonDom5,912 chainMonDom5,1099 chainNetCavPor3,924 chainNetCavPor3,1111 chainNetHg19,914 chainNetHg19,1101 chainNetMm10,914 chainNetMm10,1101 chainNetMm39,915 chainNetMm39,1102 chainNetMonDom5,915 chainNetMonDom5,1102 chainNetRn6,918 chainNetRn6,1105 chainRn6,915 chainRn6,1102 netCavPor3,921 netCavPor3,1108 netHg19,912 netHg19,1099 netMm10,912 netMm10,1099 netMm39,912 netMm39,1099 netMonDom5,912 netMonDom5,1099 netRn6,915 netRn6,1102 transMapEnsemblV5,78 transMapEnsemblV5,195 transMapEstV5,47 transMapEstV5,164 transMapRefSeqV5,47 transMapRefSeqV5,164 transMapRnaV5,47 transMapRnaV5,164 transMapV5,48 transMapV5,143 transMapV5,270 blat blastHg18KG,54 blastHg18KG,177 est,653 est,662 est,799 intronEst,734 intronEst,743 intronEst,883 mrna,394 mrna,516 refGene,265 refGene,342 refSeqComposite,1233 refSeqComposite,1729 transMapEnsemblV5,166 transMapEstV5,135 transMapRefSeqV5,135 transMapRnaV5,135 transMapV5,125 transMapV5,149 transMapV5,156 transMapV5,241 xenoMrna,15 xenoMrna,469 xenoMrna,591 xenoRefGene,225 blat--the xenoRefGene,302 blocks chainCavPor3,46 chainCavPor3,648 chainCavPor3,669 chainHg19,44 chainHg19,639 chainHg19,660 chainMm10,44 chainMm10,639 chainMm10,660 chainMm39,44 chainMm39,639 chainMm39,660 chainMonDom5,44 chainMonDom5,639 chainMonDom5,660 chainNetCavPor3,49 chainNetCavPor3,651 chainNetCavPor3,672 chainNetHg19,46 chainNetHg19,641 chainNetHg19,662 chainNetMm10,46 chainNetMm10,641 chainNetMm10,662 chainNetMm39,47 chainNetMm39,642 chainNetMm39,663 chainNetMonDom5,47 chainNetMonDom5,642 chainNetMonDom5,663 chainNetRn6,48 chainNetRn6,645 chainNetRn6,666 chainRn6,45 chainRn6,642 chainRn6,663 gold,97 gold,124 intronEst,77 netCavPor3,46 netCavPor3,648 netCavPor3,669 netHg19,44 netHg19,639 netHg19,660 netMm10,44 netMm10,639 netMm10,660 netMm39,44 netMm39,639 netMm39,660 netMonDom5,44 netMonDom5,639 netMonDom5,660 netRn6,45 netRn6,642 netRn6,663 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 ensGene,131 blue unipAliSwissprot,11 unipAliSwissprot,15 uniprot,507 uniprot,583 blumer HLTOGAannotvHg38v1,344 bm HLTOGAannotvHg38v1,335 bolchi tRNAs,474 bond uniprot,473 bonds unipDisulfBond,2 unipDisulfBond,5 uniprot,334 uniprot,336 both chainCavPor3,98 chainCavPor3,119 chainCavPor3,173 chainCavPor3,899 chainHg19,95 chainHg19,115 chainHg19,168 chainHg19,890 chainMm10,95 chainMm10,115 chainMm10,168 chainMm10,890 chainMm39,95 chainMm39,115 chainMm39,168 chainMm39,890 chainMonDom5,95 chainMonDom5,115 chainMonDom5,168 chainMonDom5,890 chainNetCavPor3,101 chainNetCavPor3,122 chainNetCavPor3,176 chainNetCavPor3,902 chainNetHg19,97 chainNetHg19,117 chainNetHg19,170 chainNetHg19,892 chainNetMm10,97 chainNetMm10,117 chainNetMm10,170 chainNetMm10,892 chainNetMm39,98 chainNetMm39,118 chainNetMm39,171 chainNetMm39,893 chainNetMonDom5,98 chainNetMonDom5,118 chainNetMonDom5,171 chainNetMonDom5,893 chainNetRn6,100 chainNetRn6,120 chainNetRn6,173 chainNetRn6,896 chainRn6,97 chainRn6,117 chainRn6,170 chainRn6,893 netCavPor3,98 netCavPor3,119 netCavPor3,173 netCavPor3,899 netHg19,95 netHg19,115 netHg19,168 netHg19,890 netMm10,95 netMm10,115 netMm10,168 netMm10,890 netMm39,95 netMm39,115 netMm39,168 netMm39,890 netMonDom5,95 netMonDom5,115 netMonDom5,168 netMonDom5,890 netRn6,97 netRn6,117 netRn6,170 netRn6,893 refGene,164 refGene,235 tRNAs,329 transMapEnsemblV5,509 transMapEstV5,478 transMapRefSeqV5,478 transMapRnaV5,478 transMapV5,584 uniprot,675 uniprot,1616 xenoRefGene,124 xenoRefGene,195 bothgap chainCavPor3,750 chainHg19,741 chainMm10,741 chainMm39,741 chainMonDom5,741 chainNetCavPor3,753 chainNetHg19,743 chainNetMm10,743 chainNetMm39,744 chainNetMonDom5,744 chainNetRn6,747 chainRn6,744 netCavPor3,750 netHg19,741 netMm10,741 netMm39,741 netMonDom5,741 netRn6,744 boundaries HLTOGAannotvHg38v1,111 blastHg18KG,59 gold,72 box chainCavPor3,377 chainCavPor3,459 chainHg19,370 chainHg19,452 chainMm10,370 chainMm10,452 chainMm39,370 chainMm39,452 chainMonDom5,370 chainMonDom5,452 chainNetCavPor3,380 chainNetCavPor3,462 chainNetHg19,372 chainNetHg19,454 chainNetMm10,372 chainNetMm10,454 chainNetMm39,373 chainNetMm39,455 chainNetMonDom5,373 chainNetMonDom5,455 chainNetRn6,376 chainNetRn6,458 chainRn6,373 chainRn6,455 est,205 est,216 est,256 gap,59 intronEst,286 intronEst,297 intronEst,337 mrna,151 mrna,162 mrna,202 netCavPor3,377 netCavPor3,459 netHg19,370 netHg19,452 netMm10,370 netMm10,452 netMm39,370 netMm39,452 netMonDom5,370 netMonDom5,452 netRn6,373 netRn6,455 refGene,254 tRNAs,37 xenoMrna,226 xenoMrna,237 xenoMrna,277 xenoRefGene,214 boxes chainCavPor3,125 chainCavPor3,135 chainCavPor3,448 chainHg19,121 chainHg19,131 chainHg19,441 chainMm10,121 chainMm10,131 chainMm10,441 chainMm39,121 chainMm39,131 chainMm39,441 chainMonDom5,121 chainMonDom5,131 chainMonDom5,441 chainNetCavPor3,128 chainNetCavPor3,138 chainNetCavPor3,451 chainNetHg19,123 chainNetHg19,133 chainNetHg19,443 chainNetMm10,123 chainNetMm10,133 chainNetMm10,443 chainNetMm39,124 chainNetMm39,134 chainNetMm39,444 chainNetMonDom5,124 chainNetMonDom5,134 chainNetMonDom5,444 chainNetRn6,126 chainNetRn6,136 chainNetRn6,447 chainRn6,123 chainRn6,133 chainRn6,444 est,176 gap,20 intronEst,257 mrna,122 nestedRepeats,126 netCavPor3,125 netCavPor3,135 netCavPor3,448 netHg19,121 netHg19,131 netHg19,441 netMm10,121 netMm10,131 netMm10,441 netMm39,121 netMm39,131 netMm39,441 netMonDom5,121 netMonDom5,131 netMonDom5,441 netRn6,123 netRn6,133 netRn6,444 refSeqComposite,165 xenoMrna,197 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 refSeqComposite,942 branch transMapEnsemblV5,218 transMapEstV5,187 transMapRefSeqV5,187 transMapRnaV5,187 transMapV5,293 branch-point augustusGene,55 brejov transMapEnsemblV5,715 transMapEstV5,684 transMapRefSeqV5,684 transMapRnaV5,684 transMapV5,790 brian blastHg18KG,197 uniprot,1959 bridge gold,122 bridged gap,48 briefly uniprot,778 broad chainCavPor3,8 chainCavPor3,71 chainCavPor3,309 chainMonDom5,6 chainMonDom5,68 chainMonDom5,302 chainNetCavPor3,9 chainNetCavPor3,74 chainNetCavPor3,312 chainNetCavPor3Viewchain,6 chainNetCavPor3Viewnet,6 chainNetMonDom5,7 chainNetMonDom5,71 chainNetMonDom5,305 chainNetMonDom5Viewchain,5 chainNetMonDom5Viewnet,5 gap,185 gold,155 netCavPor3,8 netCavPor3,71 netCavPor3,309 netMonDom5,6 netMonDom5,68 netMonDom5,302 brown gold,82 gold,96 refGene,360 refSeqComposite,1747 xenoRefGene,319 browser chainCavPor3,979 chainHg19,970 chainMm10,970 chainMm39,970 chainMonDom5,970 chainNetCavPor3,982 chainNetHg19,972 chainNetMm10,972 chainNetMm39,973 chainNetMonDom5,973 chainNetRn6,976 chainRn6,973 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 ensGene,67 est,223 est,347 est,364 intronEst,304 intronEst,428 intronEst,445 mrna,169 mrna,293 mrna,310 nestedRepeats,243 netCavPor3,979 netHg19,970 netMm10,970 netMm39,970 netMonDom5,970 netRn6,973 refSeqComposite,1121 refSeqComposite,1183 refSeqComposite,1309 refSeqComposite,1446 transMapEnsemblV5,37 transMapEnsemblV5,164 transMapEnsemblV5,530 transMapEstV5,35 transMapEstV5,133 transMapEstV5,499 transMapRefSeqV5,35 transMapRefSeqV5,133 transMapRefSeqV5,499 transMapRnaV5,35 transMapRnaV5,133 transMapRnaV5,499 transMapV5,34 transMapV5,239 transMapV5,605 ucscToINSDC,19 uniprot,1544 uniprot,1721 xenoMrna,244 xenoMrna,368 xenoMrna,385 browsing uniprot,1662 bruccoleri tRNAs,353 build refSeqComposite,299 uniprot,1552 builds transMapEnsemblV5,54 built augustusGene,51 augustusGene,67 geneid,91 burge genscan,22 genscan,146 genscan,166 genscan,173 genscan,180 genscan,207 burks tRNAs,419 but HLTOGAannotvHg38v1,194 HLTOGAannotvHg38v1,249 blastHg18KG,94 chainCavPor3,550 chainHg19,543 chainMm10,543 chainMm39,543 chainMonDom5,543 chainNetCavPor3,553 chainNetHg19,545 chainNetMm10,545 chainNetMm39,546 chainNetMonDom5,546 chainNetRn6,549 chainRn6,546 est,483 est,540 est,593 intronEst,564 intronEst,621 intronEst,674 netCavPor3,550 netHg19,543 netMm10,543 netMm39,543 netMonDom5,543 netRn6,546 refSeqComposite,426 refSeqComposite,895 refSeqComposite,1028 refSeqComposite,1447 rmsk,311 uniprot,638 uniprot,1047 button chainCavPor3,348 chainHg19,341 chainMm10,341 chainMm39,341 chainMonDom5,341 chainNetCavPor3,351 chainNetHg19,343 chainNetMm10,343 chainNetMm39,344 chainNetMonDom5,344 chainNetRn6,347 chainRn6,344 netCavPor3,348 netHg19,341 netMm10,341 netMm39,341 netMonDom5,341 netRn6,344 by HLTOGAannotvHg38v1,319 augustusGene,147 augustusGene,266 augustusGene,282 blastHg18KG,6 blastHg18KG,180 blastHg18KG,193 chainCavPor3,112 chainCavPor3,128 chainCavPor3,318 chainCavPor3,381 chainCavPor3,418 chainCavPor3,436 chainCavPor3,816 chainCavPor3,928 chainCavPor3,947 chainCavPor3,967 chainCavPor3,991 chainCavPor3,1012 chainHg19,108 chainHg19,124 chainHg19,311 chainHg19,374 chainHg19,411 chainHg19,429 chainHg19,807 chainHg19,919 chainHg19,938 chainHg19,958 chainHg19,982 chainHg19,1003 chainMm10,108 chainMm10,124 chainMm10,311 chainMm10,374 chainMm10,411 chainMm10,429 chainMm10,807 chainMm10,919 chainMm10,938 chainMm10,958 chainMm10,982 chainMm10,1003 chainMm39,108 chainMm39,124 chainMm39,311 chainMm39,374 chainMm39,411 chainMm39,429 chainMm39,807 chainMm39,919 chainMm39,938 chainMm39,958 chainMm39,982 chainMm39,1003 chainMonDom5,108 chainMonDom5,124 chainMonDom5,311 chainMonDom5,374 chainMonDom5,411 chainMonDom5,429 chainMonDom5,807 chainMonDom5,919 chainMonDom5,938 chainMonDom5,958 chainMonDom5,982 chainMonDom5,1003 chainNetCavPor3,115 chainNetCavPor3,131 chainNetCavPor3,321 chainNetCavPor3,384 chainNetCavPor3,421 chainNetCavPor3,439 chainNetCavPor3,819 chainNetCavPor3,931 chainNetCavPor3,950 chainNetCavPor3,970 chainNetCavPor3,994 chainNetCavPor3,1015 chainNetHg19,110 chainNetHg19,126 chainNetHg19,313 chainNetHg19,376 chainNetHg19,413 chainNetHg19,431 chainNetHg19,809 chainNetHg19,921 chainNetHg19,940 chainNetHg19,960 chainNetHg19,984 chainNetHg19,1005 chainNetMm10,110 chainNetMm10,126 chainNetMm10,313 chainNetMm10,376 chainNetMm10,413 chainNetMm10,431 chainNetMm10,809 chainNetMm10,921 chainNetMm10,940 chainNetMm10,960 chainNetMm10,984 chainNetMm10,1005 chainNetMm39,111 chainNetMm39,127 chainNetMm39,314 chainNetMm39,377 chainNetMm39,414 chainNetMm39,432 chainNetMm39,810 chainNetMm39,922 chainNetMm39,941 chainNetMm39,961 chainNetMm39,985 chainNetMm39,1006 chainNetMonDom5,111 chainNetMonDom5,127 chainNetMonDom5,314 chainNetMonDom5,377 chainNetMonDom5,414 chainNetMonDom5,432 chainNetMonDom5,810 chainNetMonDom5,922 chainNetMonDom5,941 chainNetMonDom5,961 chainNetMonDom5,985 chainNetMonDom5,1006 chainNetRn6,113 chainNetRn6,129 chainNetRn6,317 chainNetRn6,380 chainNetRn6,417 chainNetRn6,435 chainNetRn6,813 chainNetRn6,925 chainNetRn6,944 chainNetRn6,964 chainNetRn6,988 chainNetRn6,1009 chainRn6,110 chainRn6,126 chainRn6,314 chainRn6,377 chainRn6,414 chainRn6,432 chainRn6,810 chainRn6,922 chainRn6,941 chainRn6,961 chainRn6,985 chainRn6,1006 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 ensGene,15 est,265 est,493 est,661 est,739 gap,41 gap,86 gap,141 gap,150 gc5Base,81 geneid,21 genscan,20 genscan,88 genscan,121 gold,75 intronEst,91 intronEst,346 intronEst,574 intronEst,742 intronEst,823 microsat,110 mrna,211 mrna,456 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netCavPor3,112 netCavPor3,128 netCavPor3,318 netCavPor3,381 netCavPor3,418 netCavPor3,436 netCavPor3,816 netCavPor3,928 netCavPor3,947 netCavPor3,967 netCavPor3,991 netCavPor3,1012 netHg19,108 netHg19,124 netHg19,311 netHg19,374 netHg19,411 netHg19,429 netHg19,807 netHg19,919 netHg19,938 netHg19,958 netHg19,982 netHg19,1003 netMm10,108 netMm10,124 netMm10,311 netMm10,374 netMm10,411 netMm10,429 netMm10,807 netMm10,919 netMm10,938 netMm10,958 netMm10,982 netMm10,1003 netMm39,108 netMm39,124 netMm39,311 netMm39,374 netMm39,411 netMm39,429 netMm39,807 netMm39,919 netMm39,938 netMm39,958 netMm39,982 netMm39,1003 netMonDom5,108 netMonDom5,124 netMonDom5,311 netMonDom5,374 netMonDom5,411 netMonDom5,429 netMonDom5,807 netMonDom5,919 netMonDom5,938 netMonDom5,958 netMonDom5,982 netMonDom5,1003 netRn6,110 netRn6,126 netRn6,314 netRn6,377 netRn6,414 netRn6,432 netRn6,810 netRn6,922 netRn6,941 netRn6,961 netRn6,985 netRn6,1006 quality,105 refGene,140 refGene,145 refGene,209 refGene,227 refGene,233 refGene,329 refGene,334 refSeqComposite,38 refSeqComposite,49 refSeqComposite,69 refSeqComposite,206 refSeqComposite,371 refSeqComposite,384 refSeqComposite,444 refSeqComposite,555 refSeqComposite,624 refSeqComposite,637 refSeqComposite,641 refSeqComposite,685 refSeqComposite,761 refSeqComposite,766 refSeqComposite,843 refSeqComposite,861 refSeqComposite,1200 refSeqComposite,1716 refSeqComposite,1721 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 tRNAs,20 tRNAs,335 tRNAs,347 tRNAs,490 transMapEnsemblV5,23 transMapEnsemblV5,227 transMapEnsemblV5,395 transMapEnsemblV5,678 transMapEnsemblV5,696 transMapEnsemblV5,702 transMapEnsemblV5,740 transMapEstV5,21 transMapEstV5,196 transMapEstV5,364 transMapEstV5,647 transMapEstV5,665 transMapEstV5,671 transMapEstV5,709 transMapRefSeqV5,21 transMapRefSeqV5,196 transMapRefSeqV5,364 transMapRefSeqV5,647 transMapRefSeqV5,665 transMapRefSeqV5,671 transMapRefSeqV5,709 transMapRnaV5,21 transMapRnaV5,196 transMapRnaV5,364 transMapRnaV5,647 transMapRnaV5,665 transMapRnaV5,671 transMapRnaV5,709 transMapV5,20 transMapV5,302 transMapV5,470 transMapV5,753 transMapV5,771 transMapV5,777 transMapV5,815 ucscToINSDC,50 uniprot,39 uniprot,49 uniprot,224 uniprot,713 uniprot,720 uniprot,818 uniprot,987 uniprot,995 uniprot,1015 uniprot,1028 uniprot,1045 uniprot,1538 uniprot,1764 uniprot,1943 xenoMrna,286 xenoMrna,531 xenoRefGene,100 xenoRefGene,105 xenoRefGene,169 xenoRefGene,187 xenoRefGene,193 xenoRefGene,289 xenoRefGene,294 c HLTOGAannotvHg38v1,337 cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5Base,23 genscan,181 genscan,208 refSeqComposite,913 refSeqComposite,954 refSeqComposite,981 refSeqComposite,1040 refSeqComposite,1067 refSeqComposite,1079 tRNAs,349 tRNAs,420 transMapEnsemblV5,725 transMapEnsemblV5,731 transMapEstV5,694 transMapEstV5,700 transMapRefSeqV5,694 transMapRefSeqV5,700 transMapRnaV5,694 transMapRnaV5,700 transMapV5,800 transMapV5,806 c-114100-125-31 chainCavPor3,678 chainMm10,669 chainMm39,669 chainMonDom5,669 chainNetCavPor3,681 chainNetMm10,671 chainNetMm39,672 chainNetMonDom5,672 chainNetRn6,675 chainRn6,672 netCavPor3,678 netMm10,669 netMm39,669 netMonDom5,669 netRn6,672 c-330100-318-236 chainHg19,669 chainNetHg19,671 netHg19,669 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainCavPor3,963 chainCavPor3,1009 chainHg19,954 chainHg19,1000 chainMm10,954 chainMm10,1000 chainMm39,954 chainMm39,1000 chainMonDom5,954 chainMonDom5,1000 chainNetCavPor3,966 chainNetCavPor3,1012 chainNetHg19,956 chainNetHg19,1002 chainNetMm10,956 chainNetMm10,1002 chainNetMm39,957 chainNetMm39,1003 chainNetMonDom5,957 chainNetMonDom5,1003 chainNetRn6,960 chainNetRn6,1006 chainRn6,957 chainRn6,1003 netCavPor3,963 netCavPor3,1009 netHg19,954 netHg19,1000 netMm10,954 netMm10,1000 netMm39,954 netMm39,1000 netMonDom5,954 netMonDom5,1000 netRn6,957 netRn6,1003 cameron ensGene,174 can augustusGene,98 chainCavPor3,93 chainCavPor3,109 chainHg19,90 chainHg19,105 chainMm10,90 chainMm10,105 chainMm39,90 chainMm39,105 chainMonDom5,90 chainMonDom5,105 chainNetCavPor3,96 chainNetCavPor3,112 chainNetHg19,92 chainNetHg19,107 chainNetMm10,92 chainNetMm10,107 chainNetMm39,93 chainNetMm39,108 chainNetMonDom5,93 chainNetMonDom5,108 chainNetRn6,95 chainNetRn6,110 chainRn6,92 chainRn6,107 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 ensGene,60 ensGene,103 ensGene,137 est,118 est,249 intronEst,199 intronEst,330 mrna,64 mrna,195 netCavPor3,93 netCavPor3,109 netHg19,90 netHg19,105 netMm10,90 netMm10,105 netMm39,90 netMm39,105 netMonDom5,90 netMonDom5,105 netRn6,92 netRn6,107 refGene,125 refSeqComposite,286 refSeqComposite,724 refSeqComposite,1102 refSeqComposite,1190 refSeqComposite,1293 refSeqComposite,1300 refSeqComposite,1315 refSeqComposite,1348 refSeqComposite,1388 refSeqComposite,1448 refSeqComposite,1456 refSeqComposite,1479 refSeqComposite,1499 refSeqComposite,1507 refSeqComposite,1560 refSeqComposite,1580 refSeqComposite,1603 refSeqComposite,1673 refSeqComposite,1698 rmsk,116 simpleRepeat,35 transMapEnsemblV5,523 transMapEnsemblV5,552 transMapEnsemblV5,607 transMapEnsemblV5,615 transMapEnsemblV5,638 transMapEnsemblV5,644 transMapEstV5,492 transMapEstV5,521 transMapEstV5,576 transMapEstV5,584 transMapEstV5,607 transMapEstV5,613 transMapRefSeqV5,492 transMapRefSeqV5,521 transMapRefSeqV5,576 transMapRefSeqV5,584 transMapRefSeqV5,607 transMapRefSeqV5,613 transMapRnaV5,492 transMapRnaV5,521 transMapRnaV5,576 transMapRnaV5,584 transMapRnaV5,607 transMapRnaV5,613 transMapV5,598 transMapV5,627 transMapV5,682 transMapV5,690 transMapV5,713 transMapV5,719 uniprot,180 uniprot,656 uniprot,1064 uniprot,1093 uniprot,1104 uniprot,1326 uniprot,1555 uniprot,1693 uniprot,1714 uniprot,1739 uniprot,1749 uniprot,1758 uniprot,1769 uniprot,1792 uniprot,1798 uniprot,1881 xenoMrna,139 xenoMrna,270 xenoRefGene,85 candidates tRNAs,51 tRNAs,57 cannot uniprot,1269 canonical intronEst,68 cap-selected est,556 intronEst,637 cap-selection est,565 intronEst,646 carefully tRNAs,229 cases chainCavPor3,195 chainCavPor3,405 chainHg19,190 chainHg19,398 chainMm10,190 chainMm10,398 chainMm39,190 chainMm39,398 chainMonDom5,190 chainMonDom5,398 chainNetCavPor3,198 chainNetCavPor3,408 chainNetHg19,192 chainNetHg19,400 chainNetMm10,192 chainNetMm10,400 chainNetMm39,193 chainNetMm39,401 chainNetMonDom5,193 chainNetMonDom5,401 chainNetRn6,195 chainNetRn6,404 chainRn6,192 chainRn6,401 netCavPor3,195 netCavPor3,405 netHg19,190 netHg19,398 netMm10,190 netMm10,398 netMm39,190 netMm39,398 netMonDom5,190 netMonDom5,398 netRn6,192 netRn6,401 tRNAs,224 uniprot,757 uniprot,1183 uniprot,1452 cat uniprot,1936 catalunya geneid,47 categorized chainCavPor3,506 chainHg19,499 chainMm10,499 chainMm39,499 chainMonDom5,499 chainNetCavPor3,509 chainNetHg19,501 chainNetMm10,501 chainNetMm39,502 chainNetMonDom5,502 chainNetRn6,505 chainRn6,502 netCavPor3,506 netHg19,499 netMm10,499 netMm39,499 netMonDom5,499 netRn6,502 cauldron chainCavPor3,1061 chainHg19,1052 chainMm10,1052 chainMm39,1052 chainMonDom5,1052 chainNetCavPor3,1064 chainNetHg19,1054 chainNetMm10,1054 chainNetMm39,1055 chainNetMonDom5,1055 chainNetRn6,1058 chainRn6,1055 netCavPor3,1061 netHg19,1052 netMm10,1052 netMm39,1052 netMonDom5,1052 netRn6,1055 cause chainCavPor3,488 chainHg19,481 chainMm10,481 chainMm39,481 chainMonDom5,481 chainNetCavPor3,491 chainNetHg19,483 chainNetMm10,483 chainNetMm39,484 chainNetMonDom5,484 chainNetRn6,487 chainRn6,484 netCavPor3,488 netHg19,481 netMm10,481 netMm39,481 netMonDom5,481 netRn6,484 caused chainCavPor3,111 chainHg19,107 chainMm10,107 chainMm39,107 chainMonDom5,107 chainNetCavPor3,114 chainNetHg19,109 chainNetMm10,109 chainNetMm39,110 chainNetMonDom5,110 chainNetRn6,112 chainRn6,109 netCavPor3,111 netHg19,107 netMm10,107 netMm39,107 netMonDom5,107 netRn6,109 cavanaugh est,745 intronEst,829 mrna,462 xenoMrna,537 cavpor3 chainCavPor3,9 chainCavPor3,72 chainCavPor3,310 chainNetCavPor3,10 chainNetCavPor3,75 chainNetCavPor3,313 chainNetCavPor3Viewchain,7 chainNetCavPor3Viewnet,7 netCavPor3,9 netCavPor3,72 netCavPor3,310 cb transMapEnsemblV5,791 transMapEstV5,760 transMapRefSeqV5,760 transMapRnaV5,760 transMapV5,866 cdna augustusGene,299 est,458 est,461 intronEst,539 intronEst,542 refSeqComposite,266 refSeqComposite,362 transMapEnsemblV5,388 transMapEnsemblV5,684 transMapEnsemblV5,767 transMapEstV5,357 transMapEstV5,653 transMapEstV5,736 transMapRefSeqV5,357 transMapRefSeqV5,653 transMapRefSeqV5,736 transMapRnaV5,357 transMapRnaV5,653 transMapRnaV5,736 transMapV5,15 transMapV5,463 transMapV5,759 transMapV5,842 cdnas transMapEnsemblV5,124 transMapEstV5,93 transMapRefSeqV5,93 transMapRnaV5,93 transMapV5,199 cds HLTOGAannotvHg38v1,148 HLTOGAannotvHg38v1,170 HLTOGAannotvHg38v1,182 HLTOGAannotvHg38v1,203 HLTOGAannotvHg38v1,217 HLTOGAannotvHg38v1,229 HLTOGAannotvHg38v1,248 cell uniprot,563 cells est,453 intronEst,534 centre geneid,37 cerevisiae augustusGene,222 certain nestedRepeats,294 rmsk,301 cesar HLTOGAannotvHg38v1,102 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainCavPor3,3 chainCavPor3,29 chainCavPor3,59 chainCavPor3,62 chainCavPor3,122 chainCavPor3,274 chainCavPor3,316 chainCavPor3,411 chainCavPor3,466 chainCavPor3,570 chainCavPor3,776 chainCavPor3,819 chainCavPor3,830 chainCavPor3,838 chainCavPor3,843 chainCavPor3,866 chainCavPor3,875 chainHg19,2 chainHg19,27 chainHg19,57 chainHg19,60 chainHg19,118 chainHg19,268 chainHg19,309 chainHg19,404 chainHg19,459 chainHg19,563 chainHg19,767 chainHg19,810 chainHg19,821 chainHg19,829 chainHg19,834 chainHg19,857 chainHg19,866 chainMm10,2 chainMm10,27 chainMm10,57 chainMm10,60 chainMm10,118 chainMm10,268 chainMm10,309 chainMm10,404 chainMm10,459 chainMm10,563 chainMm10,767 chainMm10,810 chainMm10,821 chainMm10,829 chainMm10,834 chainMm10,857 chainMm10,866 chainMm39,2 chainMm39,27 chainMm39,57 chainMm39,60 chainMm39,118 chainMm39,268 chainMm39,309 chainMm39,404 chainMm39,459 chainMm39,563 chainMm39,767 chainMm39,810 chainMm39,821 chainMm39,829 chainMm39,834 chainMm39,857 chainMm39,866 chainMonDom5,2 chainMonDom5,27 chainMonDom5,57 chainMonDom5,60 chainMonDom5,118 chainMonDom5,268 chainMonDom5,309 chainMonDom5,404 chainMonDom5,459 chainMonDom5,563 chainMonDom5,767 chainMonDom5,810 chainMonDom5,821 chainMonDom5,829 chainMonDom5,834 chainMonDom5,857 chainMonDom5,866 chainNetCavPor3,3 chainNetCavPor3,11 chainNetCavPor3,32 chainNetCavPor3,62 chainNetCavPor3,65 chainNetCavPor3,125 chainNetCavPor3,277 chainNetCavPor3,319 chainNetCavPor3,414 chainNetCavPor3,469 chainNetCavPor3,573 chainNetCavPor3,779 chainNetCavPor3,822 chainNetCavPor3,833 chainNetCavPor3,841 chainNetCavPor3,846 chainNetCavPor3,869 chainNetCavPor3,878 chainNetCavPor3Viewchain,1 chainNetCavPor3Viewchain,8 chainNetCavPor3Viewnet,8 chainNetHg19,8 chainNetHg19,29 chainNetHg19,59 chainNetHg19,62 chainNetHg19,120 chainNetHg19,270 chainNetHg19,311 chainNetHg19,406 chainNetHg19,461 chainNetHg19,565 chainNetHg19,769 chainNetHg19,812 chainNetHg19,823 chainNetHg19,831 chainNetHg19,836 chainNetHg19,859 chainNetHg19,868 chainNetHg19Viewchain,1 chainNetHg19Viewchain,7 chainNetHg19Viewnet,7 chainNetMm10,8 chainNetMm10,29 chainNetMm10,59 chainNetMm10,62 chainNetMm10,120 chainNetMm10,270 chainNetMm10,311 chainNetMm10,406 chainNetMm10,461 chainNetMm10,565 chainNetMm10,769 chainNetMm10,812 chainNetMm10,823 chainNetMm10,831 chainNetMm10,836 chainNetMm10,859 chainNetMm10,868 chainNetMm10Viewchain,1 chainNetMm10Viewchain,7 chainNetMm10Viewnet,7 chainNetMm39,2 chainNetMm39,9 chainNetMm39,30 chainNetMm39,60 chainNetMm39,63 chainNetMm39,121 chainNetMm39,271 chainNetMm39,312 chainNetMm39,407 chainNetMm39,462 chainNetMm39,566 chainNetMm39,770 chainNetMm39,813 chainNetMm39,824 chainNetMm39,832 chainNetMm39,837 chainNetMm39,860 chainNetMm39,869 chainNetMm39Viewchain,1 chainNetMm39Viewchain,7 chainNetMm39Viewnet,7 chainNetMonDom5,2 chainNetMonDom5,9 chainNetMonDom5,30 chainNetMonDom5,60 chainNetMonDom5,63 chainNetMonDom5,121 chainNetMonDom5,271 chainNetMonDom5,312 chainNetMonDom5,407 chainNetMonDom5,462 chainNetMonDom5,566 chainNetMonDom5,770 chainNetMonDom5,813 chainNetMonDom5,824 chainNetMonDom5,832 chainNetMonDom5,837 chainNetMonDom5,860 chainNetMonDom5,869 chainNetMonDom5Viewchain,1 chainNetMonDom5Viewchain,7 chainNetMonDom5Viewnet,7 chainNetRn6,2 chainNetRn6,10 chainNetRn6,31 chainNetRn6,61 chainNetRn6,64 chainNetRn6,123 chainNetRn6,273 chainNetRn6,315 chainNetRn6,410 chainNetRn6,465 chainNetRn6,569 chainNetRn6,773 chainNetRn6,816 chainNetRn6,827 chainNetRn6,835 chainNetRn6,840 chainNetRn6,863 chainNetRn6,872 chainNetRn6Viewchain,1 chainNetRn6Viewchain,8 chainNetRn6Viewnet,8 chainRn6,2 chainRn6,28 chainRn6,58 chainRn6,61 chainRn6,120 chainRn6,270 chainRn6,312 chainRn6,407 chainRn6,462 chainRn6,566 chainRn6,770 chainRn6,813 chainRn6,824 chainRn6,832 chainRn6,837 chainRn6,860 chainRn6,869 netCavPor3,29 netCavPor3,59 netCavPor3,62 netCavPor3,122 netCavPor3,274 netCavPor3,316 netCavPor3,411 netCavPor3,466 netCavPor3,570 netCavPor3,776 netCavPor3,819 netCavPor3,830 netCavPor3,838 netCavPor3,843 netCavPor3,866 netCavPor3,875 netHg19,27 netHg19,57 netHg19,60 netHg19,118 netHg19,268 netHg19,309 netHg19,404 netHg19,459 netHg19,563 netHg19,767 netHg19,810 netHg19,821 netHg19,829 netHg19,834 netHg19,857 netHg19,866 netMm10,27 netMm10,57 netMm10,60 netMm10,118 netMm10,268 netMm10,309 netMm10,404 netMm10,459 netMm10,563 netMm10,767 netMm10,810 netMm10,821 netMm10,829 netMm10,834 netMm10,857 netMm10,866 netMm39,27 netMm39,57 netMm39,60 netMm39,118 netMm39,268 netMm39,309 netMm39,404 netMm39,459 netMm39,563 netMm39,767 netMm39,810 netMm39,821 netMm39,829 netMm39,834 netMm39,857 netMm39,866 netMonDom5,27 netMonDom5,57 netMonDom5,60 netMonDom5,118 netMonDom5,268 netMonDom5,309 netMonDom5,404 netMonDom5,459 netMonDom5,563 netMonDom5,767 netMonDom5,810 netMonDom5,821 netMonDom5,829 netMonDom5,834 netMonDom5,857 netMonDom5,866 netRn6,28 netRn6,58 netRn6,61 netRn6,120 netRn6,270 netRn6,312 netRn6,407 netRn6,462 netRn6,566 netRn6,770 netRn6,813 netRn6,824 netRn6,832 netRn6,837 netRn6,860 netRn6,869 transMapV5,137 uniprot,290 chained blastHg18KG,7 blastHg18KG,86 chainCavPor3,10 chainHg19,8 chainMm10,8 chainMm39,8 chainMonDom5,8 chainRn6,9 chainnet chainCavPor3,793 chainCavPor3,998 chainHg19,784 chainHg19,989 chainMm10,784 chainMm10,989 chainMm39,784 chainMm39,989 chainMonDom5,784 chainMonDom5,989 chainNetCavPor3,796 chainNetCavPor3,1001 chainNetHg19,2 chainNetHg19,786 chainNetHg19,991 chainNetMm10,2 chainNetMm10,786 chainNetMm10,991 chainNetMm39,787 chainNetMm39,992 chainNetMonDom5,787 chainNetMonDom5,992 chainNetRn6,790 chainNetRn6,995 chainRn6,787 chainRn6,992 netCavPor3,793 netCavPor3,998 netHg19,784 netHg19,989 netMm10,784 netMm10,989 netMm39,784 netMm39,989 netMonDom5,784 netMonDom5,989 netRn6,787 netRn6,992 chains blastHg18KG,102 blastHg18KG,115 chainCavPor3,198 chainCavPor3,209 chainCavPor3,220 chainCavPor3,321 chainCavPor3,360 chainCavPor3,393 chainCavPor3,398 chainCavPor3,420 chainCavPor3,432 chainCavPor3,439 chainCavPor3,496 chainCavPor3,666 chainCavPor3,681 chainCavPor3,695 chainCavPor3,764 chainCavPor3,785 chainCavPor3,800 chainCavPor3,860 chainCavPor3,891 chainCavPor3,986 chainHg19,193 chainHg19,204 chainHg19,215 chainHg19,314 chainHg19,353 chainHg19,386 chainHg19,391 chainHg19,413 chainHg19,425 chainHg19,432 chainHg19,489 chainHg19,657 chainHg19,672 chainHg19,686 chainHg19,755 chainHg19,776 chainHg19,791 chainHg19,851 chainHg19,882 chainHg19,977 chainMm10,193 chainMm10,204 chainMm10,215 chainMm10,314 chainMm10,353 chainMm10,386 chainMm10,391 chainMm10,413 chainMm10,425 chainMm10,432 chainMm10,489 chainMm10,657 chainMm10,672 chainMm10,686 chainMm10,755 chainMm10,776 chainMm10,791 chainMm10,851 chainMm10,882 chainMm10,977 chainMm39,193 chainMm39,204 chainMm39,215 chainMm39,314 chainMm39,353 chainMm39,386 chainMm39,391 chainMm39,413 chainMm39,425 chainMm39,432 chainMm39,489 chainMm39,657 chainMm39,672 chainMm39,686 chainMm39,755 chainMm39,776 chainMm39,791 chainMm39,851 chainMm39,882 chainMm39,977 chainMonDom5,193 chainMonDom5,204 chainMonDom5,215 chainMonDom5,314 chainMonDom5,353 chainMonDom5,386 chainMonDom5,391 chainMonDom5,413 chainMonDom5,425 chainMonDom5,432 chainMonDom5,489 chainMonDom5,657 chainMonDom5,672 chainMonDom5,686 chainMonDom5,755 chainMonDom5,776 chainMonDom5,791 chainMonDom5,851 chainMonDom5,882 chainMonDom5,977 chainNetCavPor3,201 chainNetCavPor3,212 chainNetCavPor3,223 chainNetCavPor3,324 chainNetCavPor3,363 chainNetCavPor3,396 chainNetCavPor3,401 chainNetCavPor3,423 chainNetCavPor3,435 chainNetCavPor3,442 chainNetCavPor3,499 chainNetCavPor3,669 chainNetCavPor3,684 chainNetCavPor3,698 chainNetCavPor3,767 chainNetCavPor3,788 chainNetCavPor3,803 chainNetCavPor3,863 chainNetCavPor3,894 chainNetCavPor3,989 chainNetHg19,195 chainNetHg19,206 chainNetHg19,217 chainNetHg19,316 chainNetHg19,355 chainNetHg19,388 chainNetHg19,393 chainNetHg19,415 chainNetHg19,427 chainNetHg19,434 chainNetHg19,491 chainNetHg19,659 chainNetHg19,674 chainNetHg19,688 chainNetHg19,757 chainNetHg19,778 chainNetHg19,793 chainNetHg19,853 chainNetHg19,884 chainNetHg19,979 chainNetMm10,195 chainNetMm10,206 chainNetMm10,217 chainNetMm10,316 chainNetMm10,355 chainNetMm10,388 chainNetMm10,393 chainNetMm10,415 chainNetMm10,427 chainNetMm10,434 chainNetMm10,491 chainNetMm10,659 chainNetMm10,674 chainNetMm10,688 chainNetMm10,757 chainNetMm10,778 chainNetMm10,793 chainNetMm10,853 chainNetMm10,884 chainNetMm10,979 chainNetMm39,196 chainNetMm39,207 chainNetMm39,218 chainNetMm39,317 chainNetMm39,356 chainNetMm39,389 chainNetMm39,394 chainNetMm39,416 chainNetMm39,428 chainNetMm39,435 chainNetMm39,492 chainNetMm39,660 chainNetMm39,675 chainNetMm39,689 chainNetMm39,758 chainNetMm39,779 chainNetMm39,794 chainNetMm39,854 chainNetMm39,885 chainNetMm39,980 chainNetMonDom5,196 chainNetMonDom5,207 chainNetMonDom5,218 chainNetMonDom5,317 chainNetMonDom5,356 chainNetMonDom5,389 chainNetMonDom5,394 chainNetMonDom5,416 chainNetMonDom5,428 chainNetMonDom5,435 chainNetMonDom5,492 chainNetMonDom5,660 chainNetMonDom5,675 chainNetMonDom5,689 chainNetMonDom5,758 chainNetMonDom5,779 chainNetMonDom5,794 chainNetMonDom5,854 chainNetMonDom5,885 chainNetMonDom5,980 chainNetRn6,198 chainNetRn6,209 chainNetRn6,220 chainNetRn6,320 chainNetRn6,359 chainNetRn6,392 chainNetRn6,397 chainNetRn6,419 chainNetRn6,431 chainNetRn6,438 chainNetRn6,495 chainNetRn6,663 chainNetRn6,678 chainNetRn6,692 chainNetRn6,761 chainNetRn6,782 chainNetRn6,797 chainNetRn6,857 chainNetRn6,888 chainNetRn6,983 chainRn6,195 chainRn6,206 chainRn6,217 chainRn6,317 chainRn6,356 chainRn6,389 chainRn6,394 chainRn6,416 chainRn6,428 chainRn6,435 chainRn6,492 chainRn6,660 chainRn6,675 chainRn6,689 chainRn6,758 chainRn6,779 chainRn6,794 chainRn6,854 chainRn6,885 chainRn6,980 netCavPor3,198 netCavPor3,209 netCavPor3,220 netCavPor3,321 netCavPor3,360 netCavPor3,393 netCavPor3,398 netCavPor3,420 netCavPor3,432 netCavPor3,439 netCavPor3,496 netCavPor3,666 netCavPor3,681 netCavPor3,695 netCavPor3,764 netCavPor3,785 netCavPor3,800 netCavPor3,860 netCavPor3,891 netCavPor3,986 netHg19,193 netHg19,204 netHg19,215 netHg19,314 netHg19,353 netHg19,386 netHg19,391 netHg19,413 netHg19,425 netHg19,432 netHg19,489 netHg19,657 netHg19,672 netHg19,686 netHg19,755 netHg19,776 netHg19,791 netHg19,851 netHg19,882 netHg19,977 netMm10,193 netMm10,204 netMm10,215 netMm10,314 netMm10,353 netMm10,386 netMm10,391 netMm10,413 netMm10,425 netMm10,432 netMm10,489 netMm10,657 netMm10,672 netMm10,686 netMm10,755 netMm10,776 netMm10,791 netMm10,851 netMm10,882 netMm10,977 netMm39,193 netMm39,204 netMm39,215 netMm39,314 netMm39,353 netMm39,386 netMm39,391 netMm39,413 netMm39,425 netMm39,432 netMm39,489 netMm39,657 netMm39,672 netMm39,686 netMm39,755 netMm39,776 netMm39,791 netMm39,851 netMm39,882 netMm39,977 netMonDom5,193 netMonDom5,204 netMonDom5,215 netMonDom5,314 netMonDom5,353 netMonDom5,386 netMonDom5,391 netMonDom5,413 netMonDom5,425 netMonDom5,432 netMonDom5,489 netMonDom5,657 netMonDom5,672 netMonDom5,686 netMonDom5,755 netMonDom5,776 netMonDom5,791 netMonDom5,851 netMonDom5,882 netMonDom5,977 netRn6,195 netRn6,206 netRn6,217 netRn6,317 netRn6,356 netRn6,389 netRn6,394 netRn6,416 netRn6,428 netRn6,435 netRn6,492 netRn6,660 netRn6,675 netRn6,689 netRn6,758 netRn6,779 netRn6,794 netRn6,854 netRn6,885 netRn6,980 transMapEnsemblV5,80 transMapEnsemblV5,197 transMapEnsemblV5,210 transMapEnsemblV5,256 transMapEnsemblV5,281 transMapEnsemblV5,329 transMapEnsemblV5,510 transMapEstV5,49 transMapEstV5,166 transMapEstV5,179 transMapEstV5,225 transMapEstV5,250 transMapEstV5,298 transMapEstV5,479 transMapRefSeqV5,49 transMapRefSeqV5,166 transMapRefSeqV5,179 transMapRefSeqV5,225 transMapRefSeqV5,250 transMapRefSeqV5,298 transMapRefSeqV5,479 transMapRnaV5,49 transMapRnaV5,166 transMapRnaV5,179 transMapRnaV5,225 transMapRnaV5,250 transMapRnaV5,298 transMapRnaV5,479 transMapV5,50 transMapV5,86 transMapV5,272 transMapV5,285 transMapV5,331 transMapV5,356 transMapV5,404 transMapV5,585 unipChain,1 unipChain,7 uniprot,288 chan tRNAs,366 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 est,122 intronEst,203 mrna,68 refSeqComposite,905 refSeqComposite,919 xenoMrna,143 changed rmsk,285 uniprot,1382 chapter geneid,172 characteristic est,327 intronEst,408 mrna,273 xenoMrna,348 check chainCavPor3,343 chainHg19,336 chainMm10,336 chainMm39,336 chainMonDom5,336 chainNetCavPor3,346 chainNetHg19,338 chainNetMm10,338 chainNetMm39,339 chainNetMonDom5,339 chainNetRn6,342 chainRn6,339 netCavPor3,343 netHg19,336 netMm10,336 netMm39,336 netMonDom5,336 netRn6,339 check-box refSeqComposite,729 checkbox uniprot,231 chen ensGene,176 chiaromonte chainCavPor3,1031 chainHg19,1022 chainMm10,1022 chainMm39,1022 chainMonDom5,1022 chainNetCavPor3,1034 chainNetHg19,1024 chainNetMm10,1024 chainNetMm39,1025 chainNetMonDom5,1025 chainNetRn6,1028 chainRn6,1025 netCavPor3,1031 netHg19,1022 netMm10,1022 netMm39,1022 netMonDom5,1022 netRn6,1025 chicken HLTOGAannotvHg38v1,57 augustusGene,204 augustusGene,262 chmod uniprot,1921 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 est,283 est,322 intronEst,364 intronEst,403 mrna,229 mrna,268 uniprot,657 xenoMrna,304 xenoMrna,343 chosen est,345 intronEst,426 mrna,291 refSeqComposite,534 xenoMrna,366 chr10 gap,165 chr15 gap,166 chr16 refSeqComposite,1553 chr18 gap,167 chr19 gap,168 chr20 gap,169 chr21 gap,171 chr4 chainCavPor3,375 chainHg19,368 chainMm10,368 chainMm39,368 chainMonDom5,368 chainNetCavPor3,378 chainNetHg19,370 chainNetMm10,370 chainNetMm39,371 chainNetMonDom5,371 chainNetRn6,374 chainRn6,371 netCavPor3,375 netHg19,368 netMm10,368 netMm39,368 netMonDom5,368 netRn6,371 chr6 transMapEnsemblV5,667 transMapEstV5,636 transMapRefSeqV5,636 transMapRnaV5,636 transMapV5,742 uniprot,1820 chris genscan,21 genscan,172 uniprot,1954 chrm gold,143 chrom refSeqComposite,1552 transMapEnsemblV5,666 transMapEstV5,635 transMapRefSeqV5,635 transMapRnaV5,635 transMapV5,741 uniprot,1819 chromosome chainCavPor3,250 chainCavPor3,330 chainCavPor3,355 chainCavPor3,363 chainCavPor3,373 chainCavPor3,382 chainCavPor3,529 chainCavPor3,544 chainCavPor3,560 chainCavPor3,630 chainCavPor3,635 chainHg19,245 chainHg19,323 chainHg19,348 chainHg19,356 chainHg19,366 chainHg19,375 chainHg19,522 chainHg19,537 chainHg19,553 chainHg19,621 chainHg19,626 chainMm10,245 chainMm10,323 chainMm10,348 chainMm10,356 chainMm10,366 chainMm10,375 chainMm10,522 chainMm10,537 chainMm10,553 chainMm10,621 chainMm10,626 chainMm39,245 chainMm39,323 chainMm39,348 chainMm39,356 chainMm39,366 chainMm39,375 chainMm39,522 chainMm39,537 chainMm39,553 chainMm39,621 chainMm39,626 chainMonDom5,245 chainMonDom5,323 chainMonDom5,348 chainMonDom5,356 chainMonDom5,366 chainMonDom5,375 chainMonDom5,522 chainMonDom5,537 chainMonDom5,553 chainMonDom5,621 chainMonDom5,626 chainNetCavPor3,253 chainNetCavPor3,333 chainNetCavPor3,358 chainNetCavPor3,366 chainNetCavPor3,376 chainNetCavPor3,385 chainNetCavPor3,532 chainNetCavPor3,547 chainNetCavPor3,563 chainNetCavPor3,633 chainNetCavPor3,638 chainNetHg19,247 chainNetHg19,325 chainNetHg19,350 chainNetHg19,358 chainNetHg19,368 chainNetHg19,377 chainNetHg19,524 chainNetHg19,539 chainNetHg19,555 chainNetHg19,623 chainNetHg19,628 chainNetMm10,247 chainNetMm10,325 chainNetMm10,350 chainNetMm10,358 chainNetMm10,368 chainNetMm10,377 chainNetMm10,524 chainNetMm10,539 chainNetMm10,555 chainNetMm10,623 chainNetMm10,628 chainNetMm39,248 chainNetMm39,326 chainNetMm39,351 chainNetMm39,359 chainNetMm39,369 chainNetMm39,378 chainNetMm39,525 chainNetMm39,540 chainNetMm39,556 chainNetMm39,624 chainNetMm39,629 chainNetMonDom5,248 chainNetMonDom5,326 chainNetMonDom5,351 chainNetMonDom5,359 chainNetMonDom5,369 chainNetMonDom5,378 chainNetMonDom5,525 chainNetMonDom5,540 chainNetMonDom5,556 chainNetMonDom5,624 chainNetMonDom5,629 chainNetRn6,250 chainNetRn6,329 chainNetRn6,354 chainNetRn6,362 chainNetRn6,372 chainNetRn6,381 chainNetRn6,528 chainNetRn6,543 chainNetRn6,559 chainNetRn6,627 chainNetRn6,632 chainRn6,247 chainRn6,326 chainRn6,351 chainRn6,359 chainRn6,369 chainRn6,378 chainRn6,525 chainRn6,540 chainRn6,556 chainRn6,624 chainRn6,629 cytoBandIdeo,1 gold,70 netCavPor3,250 netCavPor3,330 netCavPor3,355 netCavPor3,363 netCavPor3,373 netCavPor3,382 netCavPor3,529 netCavPor3,544 netCavPor3,560 netCavPor3,630 netCavPor3,635 netHg19,245 netHg19,323 netHg19,348 netHg19,356 netHg19,366 netHg19,375 netHg19,522 netHg19,537 netHg19,553 netHg19,621 netHg19,626 netMm10,245 netMm10,323 netMm10,348 netMm10,356 netMm10,366 netMm10,375 netMm10,522 netMm10,537 netMm10,553 netMm10,621 netMm10,626 netMm39,245 netMm39,323 netMm39,348 netMm39,356 netMm39,366 netMm39,375 netMm39,522 netMm39,537 netMm39,553 netMm39,621 netMm39,626 netMonDom5,245 netMonDom5,323 netMonDom5,348 netMonDom5,356 netMonDom5,366 netMonDom5,375 netMonDom5,522 netMonDom5,537 netMonDom5,553 netMonDom5,621 netMonDom5,626 netRn6,247 netRn6,326 netRn6,351 netRn6,359 netRn6,369 netRn6,378 netRn6,525 netRn6,540 netRn6,556 netRn6,624 netRn6,629 ucscToINSDC,20 uniprot,1416 chromosome-based chainCavPor3,323 chainHg19,316 chainMm10,316 chainMm39,316 chainMonDom5,316 chainNetCavPor3,326 chainNetHg19,318 chainNetMm10,318 chainNetMm39,319 chainNetMonDom5,319 chainNetRn6,322 chainRn6,319 netCavPor3,323 netHg19,316 netMm10,316 netMm39,316 netMonDom5,316 netRn6,319 chromosomes gap,164 circle rmsk,202 cite tRNAs,362 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cl transMapEnsemblV5,723 transMapEstV5,692 transMapRefSeqV5,692 transMapRnaV5,692 transMapV5,798 clark ensGene,178 est,747 intronEst,831 mrna,464 xenoMrna,539 class rmsk,199 rmsk,253 classes rmsk,150 classification HLTOGAannotvHg38v1,140 HLTOGAannotvHg38v1,304 rmsk,266 rmsk,282 classify HLTOGAannotvHg38v1,256 classifying HLTOGAannotvHg38v1,35 clawson gc5Base,83 quality,107 ucscToINSDC,52 cleaved uniprot,249 click chainCavPor3,456 chainCavPor3,470 chainHg19,449 chainHg19,463 chainMm10,449 chainMm10,463 chainMm39,449 chainMm39,463 chainMonDom5,449 chainMonDom5,463 chainNetCavPor3,459 chainNetCavPor3,473 chainNetHg19,451 chainNetHg19,465 chainNetMm10,451 chainNetMm10,465 chainNetMm39,452 chainNetMm39,466 chainNetMonDom5,452 chainNetMonDom5,466 chainNetRn6,455 chainNetRn6,469 chainRn6,452 chainRn6,466 gc5Base,56 netCavPor3,456 netCavPor3,470 netHg19,449 netHg19,463 netMm10,449 netMm10,463 netMm39,449 netMm39,463 netMonDom5,449 netMonDom5,463 netRn6,452 netRn6,466 quality,71 refGene,148 refGene,252 refSeqComposite,747 refSeqComposite,769 transMapEnsemblV5,135 transMapEnsemblV5,149 transMapEstV5,104 transMapEstV5,118 transMapRefSeqV5,104 transMapRefSeqV5,118 transMapRnaV5,104 transMapRnaV5,118 transMapV5,210 transMapV5,224 uniprot,229 uniprot,481 uniprot,1673 xenoRefGene,108 xenoRefGene,212 clicking HLTOGAannotvHg38v1,294 uniprot,1633 clinical refSeqComposite,581 clipped nestedRepeats,224 clone gap,136 gap,176 cloned est,463 intronEst,544 closer transMapEnsemblV5,68 transMapEstV5,37 transMapRefSeqV5,37 transMapRnaV5,37 transMapV5,36 closest augustusGene,241 cloverleaf tRNAs,312 clusters refSeqComposite,411 cm refGene,371 refSeqComposite,1758 xenoRefGene,330 code quality,102 refSeqComposite,1513 transMapEnsemblV5,621 transMapEnsemblV5,635 transMapEstV5,590 transMapEstV5,604 transMapRefSeqV5,590 transMapRefSeqV5,604 transMapRnaV5,590 transMapRnaV5,604 transMapV5,696 transMapV5,710 uniprot,1546 uniprot,1775 uniprot,1789 coding HLTOGAannotvHg38v1,113 HLTOGAannotvHg38v1,149 geneid,118 refGene,250 refSeqComposite,1080 simpleRepeat,38 uniprot,1102 uniprot,1133 xenoRefGene,210 codon genscan,100 genscan,122 mrna,329 mrna,354 refGene,176 refGene,183 refGene,198 refGene,228 refSeqComposite,716 refSeqComposite,810 refSeqComposite,817 refSeqComposite,832 refSeqComposite,862 transMapEnsemblV5,113 transMapEstV5,82 transMapRefSeqV5,82 transMapRnaV5,82 transMapV5,188 xenoMrna,404 xenoMrna,429 xenoRefGene,136 xenoRefGene,143 xenoRefGene,158 xenoRefGene,188 codons geneid,75 genscan,89 genscan,93 refGene,203 refGene,210 refSeqComposite,837 refSeqComposite,844 xenoRefGene,163 xenoRefGene,170 cognate transMapEnsemblV5,179 transMapEstV5,148 transMapRefSeqV5,148 transMapRnaV5,148 transMapV5,254 coiled-coil uniprot,367 collaboration ucscToINSDC,9 ucscToINSDC,31 collaborator refSeqComposite,643 collaborators refSeqComposite,687 collapsed nestedRepeats,173 collection refGene,34 refSeqComposite,31 xenoRefGene,31 color chainCavPor3,351 chainHg19,344 chainMm10,344 chainMm39,344 chainMonDom5,344 chainNetCavPor3,354 chainNetHg19,346 chainNetMm10,346 chainNetMm39,347 chainNetMonDom5,347 chainNetRn6,350 chainRn6,347 est,128 est,324 genscan,86 genscan,96 intronEst,209 intronEst,405 mrna,74 mrna,270 netCavPor3,351 netHg19,344 netMm10,344 netMm39,344 netMonDom5,344 netRn6,347 refGene,96 refGene,207 refSeqComposite,603 refSeqComposite,626 refSeqComposite,841 rmsk,207 xenoMrna,149 xenoMrna,345 xenoRefGene,56 xenoRefGene,167 color-coded HLTOGAannotvHg38v1,139 coloration gold,83 colored chainCavPor3,326 chainHg19,319 chainMm10,319 chainMm39,319 chainMonDom5,319 chainNetCavPor3,329 chainNetHg19,321 chainNetMm10,321 chainNetMm39,322 chainNetMonDom5,322 chainNetRn6,325 chainRn6,322 est,431 intronEst,512 mrna,370 netCavPor3,326 netHg19,319 netMm10,319 netMm39,319 netMonDom5,319 netRn6,322 transMapEnsemblV5,145 transMapEstV5,114 transMapRefSeqV5,114 transMapRnaV5,114 transMapV5,220 uniprot,160 uniprot,176 xenoMrna,445 coloring chainCavPor3,342 chainHg19,335 chainMm10,335 chainMm39,335 chainMonDom5,335 chainNetCavPor3,345 chainNetHg19,337 chainNetMm10,337 chainNetMm39,338 chainNetMonDom5,338 chainNetRn6,341 chainRn6,338 est,418 genscan,116 intronEst,499 mrna,330 mrna,357 netCavPor3,342 netHg19,335 netMm10,335 netMm39,335 netMonDom5,335 netRn6,338 refGene,177 refGene,184 refGene,222 refSeqComposite,811 refSeqComposite,818 refSeqComposite,856 transMapEnsemblV5,114 transMapEstV5,83 transMapRefSeqV5,83 transMapRnaV5,83 transMapV5,189 xenoMrna,405 xenoMrna,432 xenoRefGene,137 xenoRefGene,144 xenoRefGene,182 colors refGene,119 refGene,199 refSeqComposite,833 xenoRefGene,79 xenoRefGene,159 column nestedRepeats,107 refSeqComposite,1423 refSeqComposite,1434 columns transMapEnsemblV5,550 transMapEstV5,519 transMapRefSeqV5,519 transMapRnaV5,519 transMapV5,625 combination est,286 intronEst,367 mrna,232 xenoMrna,307 combinations xenoMrna,118 combined rmsk,232 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 refSeqComposite,1544 refSeqComposite,1608 transMapEnsemblV5,254 transMapEstV5,223 transMapRefSeqV5,223 transMapRnaV5,223 transMapV5,329 uniprot,1871 uniprot,1875 commands uniprot,1902 comment uniprot,260 uniprot,282 uniprot,531 uniprot,615 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 comparative chainCavPor3,12 chainHg19,10 chainMm10,10 chainMm39,10 chainMonDom5,10 chainNetCavPor3,15 chainNetCavPor3Viewchain,12 chainNetCavPor3Viewnet,12 chainNetHg19,12 chainNetHg19Viewchain,11 chainNetHg19Viewnet,11 chainNetMm10,12 chainNetMm10Viewchain,11 chainNetMm10Viewnet,11 chainNetMm39,13 chainNetMm39Viewchain,11 chainNetMm39Viewnet,11 chainNetMonDom5,13 chainNetMonDom5Viewchain,11 chainNetMonDom5Viewnet,11 chainNetRn6,14 chainNetRn6Viewchain,12 chainNetRn6Viewnet,12 chainRn6,11 netCavPor3,12 netHg19,10 netMm10,10 netMm39,10 netMonDom5,10 netRn6,11 transMapEnsemblV5,741 transMapEnsemblV5,796 transMapEstV5,710 transMapEstV5,765 transMapRefSeqV5,710 transMapRefSeqV5,765 transMapRnaV5,710 transMapRnaV5,765 transMapV5,816 transMapV5,871 compare mrna,339 refGene,193 refSeqComposite,827 transMapEnsemblV5,123 transMapEstV5,92 transMapRefSeqV5,92 transMapRnaV5,92 transMapV5,198 xenoMrna,414 xenoRefGene,153 compared transMapV5,153 comparison genscan,109 uniprot,1260 compiled refSeqComposite,1509 transMapEnsemblV5,617 transMapEstV5,586 transMapRefSeqV5,586 transMapRnaV5,586 transMapV5,692 uniprot,1771 complete genscan,213 completely refGene,175 refSeqComposite,809 uniprot,1464 xenoRefGene,135 complex chainCavPor3,166 chainHg19,161 chainMm10,161 chainMm39,161 chainMonDom5,161 chainNetCavPor3,169 chainNetHg19,163 chainNetMm10,163 chainNetMm39,164 chainNetMonDom5,164 chainNetRn6,166 chainRn6,163 netCavPor3,166 netHg19,161 netMm10,161 netMm39,161 netMonDom5,161 netRn6,163 complexity nestedRepeats,40 rmsk,30 rmsk,182 components gold,126 composed uniprot,1396 composite refSeqComposite,16 refSeqComposite,148 compositional genscan,41 uniprot,399 comput transMapEnsemblV5,809 transMapEstV5,778 transMapRefSeqV5,778 transMapRnaV5,778 transMapV5,884 computational geneid,26 geneid,145 genscan,196 uniprot,51 computed transMapEnsemblV5,226 transMapEstV5,195 transMapRefSeqV5,195 transMapRnaV5,195 transMapV5,301 comstock transMapEnsemblV5,722 transMapEstV5,691 transMapRefSeqV5,691 transMapRnaV5,691 transMapV5,797 concerning refGene,66 refSeqComposite,125 conditional augustusGene,118 configuration HLTOGAannotvHg38v1,131 chainCavPor3,315 chainHg19,308 chainMm10,308 chainMm39,308 chainMonDom5,308 chainNetCavPor3,318 chainNetHg19,310 chainNetMm10,310 chainNetMm39,311 chainNetMonDom5,311 chainNetRn6,314 chainRn6,311 est,46 gc5Base,60 gc5Base,69 genscan,64 genscan,84 intronEst,130 mrna,27 nestedRepeats,114 netCavPor3,315 netHg19,308 netMm10,308 netMm39,308 netMonDom5,308 netRn6,311 quality,74 quality,82 refGene,84 refSeqComposite,143 rmsk,138 transMapEnsemblV5,94 transMapEstV5,63 transMapRefSeqV5,63 transMapRnaV5,63 transMapV5,169 uniprot,235 uniprot,449 uniprot,650 uniprot,1755 xenoMrna,32 xenoRefGene,44 configured est,380 gc5Base,42 intronEst,461 mrna,326 quality,57 refGene,127 refSeqComposite,726 transMapEnsemblV5,110 transMapEstV5,79 transMapRefSeqV5,79 transMapRnaV5,79 transMapV5,185 xenoMrna,401 xenoRefGene,87 conflicts unipConflict,2 unipConflict,5 uniprot,373 connect uniprot,1677 conservation transMapEnsemblV5,230 transMapEstV5,199 transMapRefSeqV5,199 transMapRnaV5,199 transMapV5,305 considerable est,637 intronEst,718 considered intronEst,57 consistency uniprot,402 consortium uniprot,1986 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 refSeqComposite,1214 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult est,217 intronEst,298 mrna,163 xenoMrna,238 contact uniprot,686 uniprot,1440 contain transMapV5,14 uniprot,1163 contained chainCavPor3,892 chainHg19,883 chainMm10,883 chainMm39,883 chainMonDom5,883 chainNetCavPor3,895 chainNetHg19,885 chainNetMm10,885 chainNetMm39,886 chainNetMonDom5,886 chainNetRn6,889 chainRn6,886 netCavPor3,892 netHg19,883 netMm10,883 netMm39,883 netMonDom5,883 netRn6,886 refSeqComposite,1138 containing refSeqComposite,1653 transMapEnsemblV5,545 transMapEstV5,514 transMapRefSeqV5,514 transMapRnaV5,514 transMapV5,620 contains blastHg18KG,16 est,242 gap,65 intronEst,323 mrna,188 refGene,180 refSeqComposite,151 refSeqComposite,868 transMapEnsemblV5,17 transMapEstV5,15 transMapRefSeqV5,16 transMapRnaV5,16 xenoMrna,263 xenoRefGene,140 contamination est,625 intronEst,97 intronEst,706 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5Base,31 conterio tRNAs,472 context gap,96 contig gap,98 gold,71 gold,140 contigs gap,32 gap,79 gap,113 gold,25 gold,28 gold,46 gold,63 gold,88 gold,105 control tRNAs,498 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 refGene,130 refSeqComposite,730 xenoRefGene,90 convenience uniprot,404 conventions HLTOGAannotvHg38v1,129 chainCavPor3,313 chainHg19,306 chainMm10,306 chainMm39,306 chainMonDom5,306 chainNetCavPor3,316 chainNetHg19,308 chainNetMm10,308 chainNetMm39,309 chainNetMonDom5,309 chainNetRn6,312 chainRn6,309 est,44 est,52 genscan,62 genscan,70 intronEst,128 intronEst,136 mrna,25 mrna,33 nestedRepeats,112 netCavPor3,313 netHg19,306 netMm10,306 netMm39,306 netMonDom5,306 netRn6,309 refGene,82 refGene,90 refSeqComposite,141 refSeqComposite,451 refSeqComposite,597 rmsk,136 transMapEnsemblV5,92 transMapEnsemblV5,100 transMapEstV5,61 transMapEstV5,69 transMapRefSeqV5,61 transMapRefSeqV5,69 transMapRnaV5,61 transMapRnaV5,69 transMapV5,167 transMapV5,175 uniprot,447 xenoMrna,30 xenoMrna,38 xenoRefGene,42 xenoRefGene,50 converted chainCavPor3,606 chainHg19,598 chainMm10,598 chainMm39,598 chainMonDom5,598 chainNetCavPor3,609 chainNetHg19,600 chainNetMm10,600 chainNetMm39,601 chainNetMonDom5,601 chainNetRn6,604 chainRn6,601 netCavPor3,606 netHg19,598 netMm10,598 netMm39,598 netMonDom5,598 netRn6,601 refSeqComposite,1170 refSeqComposite,1583 uniprot,1477 uniprot,1760 coordinates refSeqComposite,36 refSeqComposite,67 uniprot,29 uniprot,643 uniprot,1848 uniprot,1855 uniprot,1886 uniprot,1892 copies microsat,80 copy uniprot,419 correct uniprot,962 uniprot,1222 corrections refGene,61 refSeqComposite,120 corresponding transMapEnsemblV5,257 transMapEstV5,226 transMapRefSeqV5,226 transMapRnaV5,226 transMapV5,332 corresponds est,225 intronEst,306 mrna,171 xenoMrna,246 could refSeqComposite,965 refSeqComposite,1540 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 covariance tRNAs,60 tRNAs,402 cove tRNAs,64 cove-predicted tRNAs,341 cover est,558 intronEst,639 coverage ctgPos2,32 uniprot,1485 covered chainCavPor3,815 chainHg19,806 chainMm10,806 chainMm39,806 chainMonDom5,806 chainNetCavPor3,818 chainNetHg19,808 chainNetMm10,808 chainNetMm39,809 chainNetMonDom5,809 chainNetRn6,812 chainRn6,809 netCavPor3,815 netHg19,806 netMm10,806 netMm39,806 netMonDom5,806 netRn6,809 cow transMapEnsemblV5,448 transMapEstV5,417 transMapRefSeqV5,417 transMapRnaV5,417 transMapV5,523 cox ensGene,180 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create refSeqComposite,309 created chainCavPor3,990 chainHg19,981 chainMm10,981 chainMm39,981 chainMonDom5,981 chainNetCavPor3,993 chainNetHg19,983 chainNetMm10,983 chainNetMm39,984 chainNetMonDom5,984 chainNetRn6,987 chainRn6,984 microsat,89 netCavPor3,990 netHg19,981 netMm10,981 netMm39,981 netMonDom5,981 netRn6,984 refSeqComposite,101 refSeqComposite,1149 rmsk,13 transMapEnsemblV5,74 transMapEstV5,43 transMapRefSeqV5,43 transMapRnaV5,43 transMapV5,42 uniprot,824 uniprot,1942 creates chainCavPor3,640 chainHg19,631 chainMm10,631 chainMm39,631 chainMonDom5,631 chainNetCavPor3,643 chainNetHg19,633 chainNetMm10,633 chainNetMm39,634 chainNetMonDom5,634 chainNetRn6,637 chainRn6,634 netCavPor3,640 netHg19,631 netMm10,631 netMm39,631 netMonDom5,631 netRn6,634 credits HLTOGAannotvHg38v1,314 augustusGene,247 blastHg18KG,137 chainCavPor3,916 chainHg19,907 chainMm10,907 chainMm39,907 chainMonDom5,907 chainNetCavPor3,919 chainNetHg19,909 chainNetMm10,909 chainNetMm39,910 chainNetMonDom5,910 chainNetRn6,913 chainRn6,910 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 ensGene,145 est,721 gc5Base,71 geneid,142 genscan,169 intronEst,805 microsat,104 mrna,437 nestedRepeats,302 netCavPor3,916 netHg19,907 netMm10,907 netMm39,907 netMonDom5,907 netRn6,910 quality,84 refGene,317 refSeqComposite,1706 rmsk,325 simpleRepeat,66 tRNAs,328 transMapEnsemblV5,673 transMapEstV5,642 transMapRefSeqV5,642 transMapRnaV5,642 transMapV5,748 ucscToINSDC,42 uniprot,1938 xenoMrna,512 xenoRefGene,277 crg geneid,44 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 est,300 est,318 est,356 est,374 intronEst,381 intronEst,399 intronEst,437 intronEst,455 mrna,246 mrna,264 mrna,302 mrna,320 transMapEnsemblV5,356 transMapEstV5,325 transMapRefSeqV5,325 transMapRnaV5,325 transMapV5,431 xenoMrna,321 xenoMrna,339 xenoMrna,377 xenoMrna,395 cross-species transMapEnsemblV5,26 transMapEstV5,24 transMapRefSeqV5,24 transMapRnaV5,24 transMapV5,23 cruz chainCavPor3,966 chainCavPor3,1011 chainHg19,957 chainHg19,1002 chainMm10,957 chainMm10,1002 chainMm39,957 chainMm39,1002 chainMonDom5,957 chainMonDom5,1002 chainNetCavPor3,969 chainNetCavPor3,1014 chainNetHg19,959 chainNetHg19,1004 chainNetMm10,959 chainNetMm10,1004 chainNetMm39,960 chainNetMm39,1005 chainNetMonDom5,960 chainNetMonDom5,1005 chainNetRn6,963 chainNetRn6,1008 chainRn6,960 chainRn6,1005 netCavPor3,966 netCavPor3,1011 netHg19,957 netHg19,1002 netMm10,957 netMm10,1002 netMm39,957 netMm39,1002 netMonDom5,957 netMonDom5,1002 netRn6,960 netRn6,1005 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 cuff ensGene,182 culex augustusGene,220 curated ncbiRefSeq,6 ncbiRefSeqCurated,2 ncbiRefSeqCurated,6 refGene,333 refGene,411 refSeqComposite,87 refSeqComposite,201 refSeqComposite,209 refSeqComposite,250 refSeqComposite,314 refSeqComposite,399 refSeqComposite,421 refSeqComposite,468 refSeqComposite,519 refSeqComposite,552 refSeqComposite,587 refSeqComposite,1408 refSeqComposite,1668 refSeqComposite,1720 refSeqComposite,1798 uniprot,35 uniprot,110 uniprot,142 xenoRefGene,293 xenoRefGene,370 curator rmsk,261 curr geneid,167 nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current est,160 intronEst,241 mrna,106 nestedRepeats,250 uniprot,1296 uniprot,1575 uniprot,1692 uniprot,1712 xenoMrna,181 currently gold,68 refSeqComposite,472 curwen ensGene,184 cutoff refSeqComposite,938 cytoplamsic uniprot,518 cytoplasmic unipLocCytopl,1 unipLocCytopl,3 uniprot,276 uniprot,284 uniprot,569 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5Base,24 d HLTOGAannotvHg38v1,341 augustusGene,293 chainCavPor3,1058 chainCavPor3,1102 chainHg19,1049 chainHg19,1093 chainMm10,1049 chainMm10,1093 chainMm39,1049 chainMm39,1093 chainMonDom5,1049 chainMonDom5,1093 chainNetCavPor3,1061 chainNetCavPor3,1105 chainNetHg19,1051 chainNetHg19,1095 chainNetMm10,1051 chainNetMm10,1095 chainNetMm39,1052 chainNetMm39,1096 chainNetMonDom5,1052 chainNetMonDom5,1096 chainNetRn6,1055 chainNetRn6,1099 chainRn6,1052 chainRn6,1096 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 ensGene,171 genscan,192 netCavPor3,1058 netCavPor3,1102 netHg19,1049 netHg19,1093 netMm10,1049 netMm10,1093 netMm39,1049 netMm39,1093 netMonDom5,1049 netMonDom5,1093 netRn6,1052 netRn6,1096 transMapEnsemblV5,761 transMapEnsemblV5,795 transMapEstV5,730 transMapEstV5,764 transMapRefSeqV5,730 transMapRefSeqV5,764 transMapRnaV5,730 transMapRnaV5,764 transMapV5,836 transMapV5,870 d23-6 est,792 intronEst,876 mrna,509 xenoMrna,584 d36-42 est,766 intronEst,850 mrna,483 xenoMrna,558 d501-4 refGene,429 refSeqComposite,1816 xenoRefGene,388 d71-5 uniprot,2005 d756-63 refGene,395 refSeqComposite,1782 xenoRefGene,354 d93-7 tRNAs,389 da est,744 est,772 intronEst,828 intronEst,856 mrna,461 mrna,489 xenoMrna,536 xenoMrna,564 dark refGene,113 refSeqComposite,621 unipAliSwissprot,10 uniprot,162 uniprot,582 uniprot,587 xenoRefGene,73 darker intronEst,145 darkly est,66 mrna,47 xenoMrna,52 data HLTOGAannotvHg38v1,316 cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 ensGene,55 ensGene,59 ensGene,70 ensGene,102 est,731 gap,44 gap,135 gc5Base,73 geneid,153 intronEst,815 microsat,47 mrna,448 nestedRepeats,263 nestedRepeats,280 refGene,37 refGene,327 refSeqComposite,153 refSeqComposite,652 refSeqComposite,1153 refSeqComposite,1159 refSeqComposite,1285 refSeqComposite,1289 refSeqComposite,1311 refSeqComposite,1363 refSeqComposite,1648 refSeqComposite,1714 rmsk,126 rmsk,287 tRNAs,360 transMapEnsemblV5,515 transMapEnsemblV5,519 transMapEnsemblV5,533 transMapEnsemblV5,570 transMapEnsemblV5,574 transMapEnsemblV5,688 transMapEstV5,484 transMapEstV5,488 transMapEstV5,502 transMapEstV5,539 transMapEstV5,543 transMapEstV5,657 transMapRefSeqV5,484 transMapRefSeqV5,488 transMapRefSeqV5,502 transMapRefSeqV5,539 transMapRefSeqV5,543 transMapRefSeqV5,657 transMapRnaV5,484 transMapRnaV5,488 transMapRnaV5,502 transMapRnaV5,539 transMapRnaV5,543 transMapRnaV5,657 transMapV5,590 transMapV5,594 transMapV5,608 transMapV5,645 transMapV5,649 transMapV5,763 ucscToINSDC,34 ucscToINSDC,44 uniprot,32 uniprot,45 uniprot,892 uniprot,895 uniprot,1683 uniprot,1705 uniprot,1709 uniprot,1724 uniprot,1837 uniprot,1980 xenoMrna,523 xenoRefGene,34 xenoRefGene,287 database chainCavPor3,982 chainHg19,973 chainMm10,973 chainMm39,973 chainMonDom5,973 chainNetCavPor3,985 chainNetHg19,975 chainNetMm10,975 chainNetMm39,976 chainNetMonDom5,976 chainNetRn6,979 chainRn6,976 ensGene,193 est,764 est,790 intronEst,848 intronEst,874 mrna,481 mrna,507 nestedRepeats,345 netCavPor3,982 netHg19,973 netMm10,973 netMm39,973 netMonDom5,973 netRn6,976 quality,97 refGene,393 refGene,414 refGene,427 refSeqComposite,560 refSeqComposite,1398 refSeqComposite,1780 refSeqComposite,1801 refSeqComposite,1814 rmsk,125 rmsk,368 tRNAs,110 tRNAs,372 tRNAs,387 transMapEnsemblV5,165 transMapEstV5,134 transMapRefSeqV5,134 transMapRnaV5,134 transMapV5,240 ucscToINSDC,8 ucscToINSDC,30 ucscToINSDC,41 uniprot,25 uniprot,821 uniprot,2003 uniprot,2031 xenoMrna,556 xenoMrna,582 xenoRefGene,352 xenoRefGene,373 xenoRefGene,386 databases est,612 est,738 intronEst,101 intronEst,693 intronEst,822 mrna,455 refSeqComposite,278 refSeqComposite,425 tRNAs,489 transMapEnsemblV5,695 transMapEstV5,664 transMapRefSeqV5,664 transMapRnaV5,664 transMapV5,770 xenoMrna,530 dataset refSeqComposite,528 david chainCavPor3,976 chainHg19,967 chainMm10,967 chainMm39,967 chainMonDom5,967 chainNetCavPor3,979 chainNetHg19,969 chainNetMm10,969 chainNetMm39,970 chainNetMonDom5,970 chainNetRn6,973 chainRn6,970 netCavPor3,976 netHg19,967 netMm10,967 netMm39,967 netMonDom5,967 netRn6,970 davis transMapEnsemblV5,724 transMapEstV5,693 transMapRefSeqV5,693 transMapRnaV5,693 transMapV5,799 de augustusGene,303 geneid,38 transMapEnsemblV5,771 transMapEstV5,740 transMapRefSeqV5,740 transMapRnaV5,740 transMapV5,846 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainMm10,4 chainMm10,66 chainMm10,300 chainNetMm10,4 chainNetMm10,68 chainNetMm10,302 chainNetMm10Viewchain,3 chainNetMm10Viewnet,3 nestedRepeats,389 nestedRepeats,411 netMm10,4 netMm10,66 netMm10,300 rmsk,412 rmsk,434 transMapEnsemblV5,746 transMapEnsemblV5,812 transMapEstV5,715 transMapEstV5,781 transMapRefSeqV5,715 transMapRefSeqV5,781 transMapRnaV5,715 transMapRnaV5,781 transMapV5,821 transMapV5,887 default chainCavPor3,319 chainHg19,312 chainMm10,312 chainMm39,312 chainMonDom5,312 chainNetCavPor3,322 chainNetHg19,314 chainNetMm10,314 chainNetMm39,315 chainNetMonDom5,315 chainNetRn6,318 chainRn6,315 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netCavPor3,319 netHg19,312 netMm10,312 netMm39,312 netMonDom5,312 netRn6,315 refGene,141 refGene,234 refSeqComposite,762 refSeqComposite,1036 refSeqComposite,1063 uniprot,225 xenoRefGene,101 xenoRefGene,194 defined refSeqComposite,623 uniprot,305 uniprot,1387 defining geneid,106 degraded est,527 intronEst,608 degree est,622 intronEst,703 deletion chainCavPor3,149 chainCavPor3,1063 chainHg19,145 chainHg19,1054 chainMm10,145 chainMm10,1054 chainMm39,145 chainMm39,1054 chainMonDom5,145 chainMonDom5,1054 chainNetCavPor3,152 chainNetCavPor3,1066 chainNetHg19,147 chainNetHg19,1056 chainNetMm10,147 chainNetMm10,1056 chainNetMm39,148 chainNetMm39,1057 chainNetMonDom5,148 chainNetMonDom5,1057 chainNetRn6,150 chainNetRn6,1060 chainRn6,147 chainRn6,1057 est,440 intronEst,521 mrna,379 netCavPor3,149 netCavPor3,1063 netHg19,145 netHg19,1054 netMm10,145 netMm10,1054 netMm39,145 netMm39,1054 netMonDom5,145 netMonDom5,1054 netRn6,147 netRn6,1057 refSeqComposite,946 refSeqComposite,1042 refSeqComposite,1069 rmsk,220 xenoMrna,454 deletions chainCavPor3,117 chainCavPor3,181 chainHg19,113 chainHg19,176 chainMm10,113 chainMm10,176 chainMm39,113 chainMm39,176 chainMonDom5,113 chainMonDom5,176 chainNetCavPor3,120 chainNetCavPor3,184 chainNetHg19,115 chainNetHg19,178 chainNetMm10,115 chainNetMm10,178 chainNetMm39,116 chainNetMm39,179 chainNetMonDom5,116 chainNetMonDom5,179 chainNetRn6,118 chainNetRn6,181 chainRn6,115 chainRn6,178 netCavPor3,117 netCavPor3,181 netHg19,113 netHg19,176 netMm10,113 netMm10,176 netMm39,113 netMm39,176 netMonDom5,113 netMonDom5,176 netRn6,115 netRn6,178 dense est,58 gold,57 intronEst,142 mrna,39 nestedRepeats,157 nestedRepeats,168 xenoMrna,44 dependencies genscan,183 depending uniprot,442 uniprot,808 depicts gap,10 gold,61 deposited est,599 intronEst,680 deprecated uniprot,1044 derived chainCavPor3,766 chainHg19,757 chainMm10,757 chainMm39,757 chainMonDom5,757 chainNetCavPor3,769 chainNetHg19,759 chainNetMm10,759 chainNetMm39,760 chainNetMonDom5,760 chainNetRn6,763 chainRn6,760 netCavPor3,766 netHg19,757 netMm10,757 netMm39,757 netMonDom5,757 netRn6,760 tRNAs,129 uniprot,830 described chainCavPor3,773 chainHg19,764 chainMm10,764 chainMm39,764 chainMonDom5,764 chainNetCavPor3,776 chainNetHg19,766 chainNetMm10,766 chainNetMm39,767 chainNetMonDom5,767 chainNetRn6,770 chainRn6,767 genscan,161 nestedRepeats,60 nestedRepeats,338 netCavPor3,773 netHg19,764 netMm10,764 netMm39,764 netMonDom5,764 netRn6,767 refSeqComposite,1637 rmsk,96 rmsk,361 uniprot,1524 describes augustusGene,226 describing refSeqComposite,254 description HLTOGAannotvHg38v1,15 augustusGene,12 blastHg18KG,13 chainCavPor3,14 chainCavPor3,778 chainHg19,12 chainHg19,769 chainMm10,12 chainMm10,769 chainMm39,12 chainMm39,769 chainMonDom5,12 chainMonDom5,769 chainNetCavPor3,17 chainNetCavPor3,781 chainNetHg19,14 chainNetHg19,771 chainNetMm10,14 chainNetMm10,771 chainNetMm39,15 chainNetMm39,772 chainNetMonDom5,15 chainNetMonDom5,772 chainNetRn6,16 chainNetRn6,775 chainRn6,13 chainRn6,772 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ctgPos2,7 ensGene,9 ensGene,32 est,10 est,109 gap,7 gc5Base,11 geneid,10 genscan,10 genscan,77 genscan,133 gold,8 intronEst,12 intronEst,190 microsat,10 mrna,10 mrna,55 nestedRepeats,14 netCavPor3,14 netCavPor3,778 netHg19,12 netHg19,769 netMm10,12 netMm10,769 netMm39,12 netMm39,769 netMonDom5,12 netMonDom5,769 netRn6,13 netRn6,772 quality,10 refGene,15 refGene,137 refSeqComposite,11 refSeqComposite,737 rmsk,9 simpleRepeat,11 tRNAs,13 transMapEnsemblV5,14 transMapEnsemblV5,232 transMapEstV5,12 transMapEstV5,201 transMapRefSeqV5,13 transMapRefSeqV5,201 transMapRnaV5,13 transMapRnaV5,201 transMapV5,11 transMapV5,307 ucscToINSDC,13 uniprot,11 uniprot,106 xenoMrna,10 xenoMrna,130 xenoRefGene,10 xenoRefGene,97 descriptions augustusGene,91 designed geneid,61 refSeqComposite,1436 uniprot,1355 desired est,285 intronEst,366 mrna,231 xenoMrna,306 destination transMapEnsemblV5,414 transMapEstV5,383 transMapRefSeqV5,383 transMapRnaV5,383 transMapV5,489 destined uniprot,244 destuniq transMapEnsemblV5,433 transMapEstV5,402 transMapRefSeqV5,402 transMapRnaV5,402 transMapV5,508 detail genscan,164 detailed augustusGene,90 chainCavPor3,462 chainCavPor3,481 chainHg19,455 chainHg19,474 chainMm10,455 chainMm10,474 chainMm39,455 chainMm39,474 chainMonDom5,455 chainMonDom5,474 chainNetCavPor3,465 chainNetCavPor3,484 chainNetHg19,457 chainNetHg19,476 chainNetMm10,457 chainNetMm10,476 chainNetMm39,458 chainNetMm39,477 chainNetMonDom5,458 chainNetMonDom5,477 chainNetRn6,461 chainNetRn6,480 chainRn6,458 chainRn6,477 nestedRepeats,70 netCavPor3,462 netCavPor3,481 netHg19,455 netHg19,474 netMm10,455 netMm10,474 netMm39,455 netMm39,474 netMonDom5,455 netMonDom5,474 netRn6,458 netRn6,477 rmsk,37 tRNAs,97 uniprot,692 details refSeqComposite,94 refSeqComposite,1122 rmsk,119 transMapEnsemblV5,234 transMapEstV5,203 transMapRefSeqV5,203 transMapRnaV5,203 transMapV5,309 uniprot,499 uniprot,771 uniprot,1157 uniprot,1584 detected tRNAs,377 detection tRNAs,39 tRNAs,449 determination transMapEnsemblV5,272 transMapEstV5,241 transMapRefSeqV5,241 transMapRnaV5,241 transMapV5,347 determine HLTOGAannotvHg38v1,107 transMapV5,90 determining chainCavPor3,486 chainHg19,479 chainMm10,479 chainMm39,479 chainMonDom5,479 chainNetCavPor3,489 chainNetHg19,481 chainNetMm10,481 chainNetMm39,482 chainNetMonDom5,482 chainNetRn6,485 chainRn6,482 netCavPor3,486 netHg19,479 netMm10,479 netMm39,479 netMonDom5,479 netRn6,482 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed chainCavPor3,923 chainCavPor3,958 chainCavPor3,1004 chainHg19,914 chainHg19,949 chainHg19,995 chainMm10,914 chainMm10,949 chainMm10,995 chainMm39,914 chainMm39,949 chainMm39,995 chainMonDom5,914 chainMonDom5,949 chainMonDom5,995 chainNetCavPor3,926 chainNetCavPor3,961 chainNetCavPor3,1007 chainNetHg19,916 chainNetHg19,951 chainNetHg19,997 chainNetMm10,916 chainNetMm10,951 chainNetMm10,997 chainNetMm39,917 chainNetMm39,952 chainNetMm39,998 chainNetMonDom5,917 chainNetMonDom5,952 chainNetMonDom5,998 chainNetRn6,920 chainNetRn6,955 chainNetRn6,1001 chainRn6,917 chainRn6,952 chainRn6,998 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 geneid,20 netCavPor3,923 netCavPor3,958 netCavPor3,1004 netHg19,914 netHg19,949 netHg19,995 netMm10,914 netMm10,949 netMm10,995 netMm39,914 netMm39,949 netMm39,995 netMonDom5,914 netMonDom5,949 netMonDom5,995 netRn6,917 netRn6,952 netRn6,998 dfam rmsk,112 dg HLTOGAannotvHg38v1,351 di-nucleotide microsat,3 microsat,32 diagnostics refSeqComposite,582 dieci tRNAs,476 diekhans augustusGene,288 transMapEnsemblV5,680 transMapEnsemblV5,713 transMapEnsemblV5,756 transMapEnsemblV5,788 transMapEstV5,649 transMapEstV5,682 transMapEstV5,725 transMapEstV5,757 transMapRefSeqV5,649 transMapRefSeqV5,682 transMapRefSeqV5,725 transMapRefSeqV5,757 transMapRnaV5,649 transMapRnaV5,682 transMapRnaV5,725 transMapRnaV5,757 transMapV5,755 transMapV5,788 transMapV5,831 transMapV5,863 uniprot,1540 uniprot,1957 diemand uniprot,2014 differ est,403 intronEst,484 refSeqComposite,287 uniprot,746 uniprot,1131 difference uniprot,1251 differences ncbiRefSeqGenomicDiff,3 refSeqComposite,63 refSeqComposite,459 refSeqComposite,888 refSeqComposite,957 uniprot,374 uniprot,921 uniprot,1370 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainCavPor3,561 chainHg19,554 chainMm10,554 chainMm39,554 chainMonDom5,554 chainNetCavPor3,564 chainNetHg19,556 chainNetMm10,556 chainNetMm39,557 chainNetMonDom5,557 chainNetRn6,560 chainRn6,557 ensGene,22 gc5Base,50 genscan,54 netCavPor3,561 netHg19,554 netMm10,554 netMm39,554 netMonDom5,554 netRn6,557 quality,65 refGene,74 refSeqComposite,98 refSeqComposite,133 refSeqComposite,870 rmsk,149 uniprot,634 xenoMrna,111 differing refSeqComposite,152 difficult transMapEnsemblV5,276 transMapEstV5,245 transMapRefSeqV5,245 transMapRnaV5,245 transMapV5,351 diffs ncbiRefSeqGenomicDiff,2 refSeqComposite,456 refSeqComposite,866 refSeqComposite,1196 refSeqComposite,1370 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 direction est,78 est,96 intronEst,159 intronEst,177 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 ensGene,111 uniprot,993 directory ensGene,86 ensGene,94 refSeqComposite,1526 refSeqComposite,1575 refSeqComposite,1595 rmsk,134 discarded chainCavPor3,692 chainHg19,683 chainMm10,683 chainMm39,683 chainMonDom5,683 chainNetCavPor3,695 chainNetHg19,685 chainNetMm10,685 chainNetMm39,686 chainNetMonDom5,686 chainNetRn6,689 chainRn6,686 netCavPor3,692 netHg19,683 netMm10,683 netMm39,683 netMonDom5,683 netRn6,686 refGene,275 refSeqComposite,1243 transMapEnsemblV5,380 transMapEstV5,349 transMapRefSeqV5,349 transMapRnaV5,349 transMapV5,455 xenoRefGene,235 discover blastHg18KG,57 discovery transMapEnsemblV5,735 transMapEstV5,704 transMapRefSeqV5,704 transMapRnaV5,704 transMapV5,810 discussion nestedRepeats,364 rmsk,387 disease uniprot,545 uniprot,616 diseases simpleRepeat,54 display HLTOGAannotvHg38v1,128 chainCavPor3,242 chainCavPor3,312 chainCavPor3,357 chainCavPor3,387 chainCavPor3,446 chainCavPor3,475 chainCavPor3,504 chainCavPor3,980 chainHg19,237 chainHg19,305 chainHg19,350 chainHg19,380 chainHg19,439 chainHg19,468 chainHg19,497 chainHg19,971 chainMm10,237 chainMm10,305 chainMm10,350 chainMm10,380 chainMm10,439 chainMm10,468 chainMm10,497 chainMm10,971 chainMm39,237 chainMm39,305 chainMm39,350 chainMm39,380 chainMm39,439 chainMm39,468 chainMm39,497 chainMm39,971 chainMonDom5,237 chainMonDom5,305 chainMonDom5,350 chainMonDom5,380 chainMonDom5,439 chainMonDom5,468 chainMonDom5,497 chainMonDom5,971 chainNetCavPor3,245 chainNetCavPor3,315 chainNetCavPor3,360 chainNetCavPor3,390 chainNetCavPor3,449 chainNetCavPor3,478 chainNetCavPor3,507 chainNetCavPor3,983 chainNetHg19,239 chainNetHg19,307 chainNetHg19,352 chainNetHg19,382 chainNetHg19,441 chainNetHg19,470 chainNetHg19,499 chainNetHg19,973 chainNetMm10,239 chainNetMm10,307 chainNetMm10,352 chainNetMm10,382 chainNetMm10,441 chainNetMm10,470 chainNetMm10,499 chainNetMm10,973 chainNetMm39,240 chainNetMm39,308 chainNetMm39,353 chainNetMm39,383 chainNetMm39,442 chainNetMm39,471 chainNetMm39,500 chainNetMm39,974 chainNetMonDom5,240 chainNetMonDom5,308 chainNetMonDom5,353 chainNetMonDom5,383 chainNetMonDom5,442 chainNetMonDom5,471 chainNetMonDom5,500 chainNetMonDom5,974 chainNetRn6,242 chainNetRn6,311 chainNetRn6,356 chainNetRn6,386 chainNetRn6,445 chainNetRn6,474 chainNetRn6,503 chainNetRn6,977 chainRn6,239 chainRn6,308 chainRn6,353 chainRn6,383 chainRn6,442 chainRn6,471 chainRn6,500 chainRn6,974 est,43 est,51 est,59 est,124 est,151 est,181 est,326 est,350 est,366 est,382 est,392 est,441 genscan,61 genscan,69 genscan,104 gold,120 intronEst,116 intronEst,127 intronEst,135 intronEst,143 intronEst,205 intronEst,232 intronEst,262 intronEst,407 intronEst,431 intronEst,447 intronEst,463 intronEst,473 intronEst,522 mrna,24 mrna,32 mrna,40 mrna,70 mrna,97 mrna,127 mrna,272 mrna,296 mrna,312 mrna,328 mrna,380 nestedRepeats,111 netCavPor3,242 netCavPor3,312 netCavPor3,357 netCavPor3,387 netCavPor3,446 netCavPor3,475 netCavPor3,504 netCavPor3,980 netHg19,237 netHg19,305 netHg19,350 netHg19,380 netHg19,439 netHg19,468 netHg19,497 netHg19,971 netMm10,237 netMm10,305 netMm10,350 netMm10,380 netMm10,439 netMm10,468 netMm10,497 netMm10,971 netMm39,237 netMm39,305 netMm39,350 netMm39,380 netMm39,439 netMm39,468 netMm39,497 netMm39,971 netMonDom5,237 netMonDom5,305 netMonDom5,350 netMonDom5,380 netMonDom5,439 netMonDom5,468 netMonDom5,497 netMonDom5,971 netRn6,239 netRn6,308 netRn6,353 netRn6,383 netRn6,442 netRn6,471 netRn6,500 netRn6,974 quality,101 refGene,81 refGene,89 refGene,118 refGene,154 refGene,197 refSeqComposite,140 refSeqComposite,450 refSeqComposite,596 refSeqComposite,717 refSeqComposite,775 refSeqComposite,831 refSeqComposite,1179 refSeqComposite,1442 rmsk,135 rmsk,141 rmsk,212 transMapEnsemblV5,91 transMapEnsemblV5,99 transMapEnsemblV5,112 transMapEstV5,60 transMapEstV5,68 transMapEstV5,81 transMapRefSeqV5,60 transMapRefSeqV5,68 transMapRefSeqV5,81 transMapRnaV5,60 transMapRnaV5,68 transMapRnaV5,81 transMapV5,166 transMapV5,174 transMapV5,187 uniprot,446 xenoMrna,29 xenoMrna,37 xenoMrna,45 xenoMrna,145 xenoMrna,172 xenoMrna,202 xenoMrna,347 xenoMrna,371 xenoMrna,387 xenoMrna,403 xenoMrna,455 xenoRefGene,41 xenoRefGene,49 xenoRefGene,78 xenoRefGene,114 xenoRefGene,157 displayed chainCavPor3,423 chainCavPor3,520 chainCavPor3,697 chainHg19,416 chainHg19,513 chainHg19,688 chainMm10,416 chainMm10,513 chainMm10,688 chainMm39,416 chainMm39,513 chainMm39,688 chainMonDom5,416 chainMonDom5,513 chainMonDom5,688 chainNetCavPor3,426 chainNetCavPor3,523 chainNetCavPor3,700 chainNetHg19,418 chainNetHg19,515 chainNetHg19,690 chainNetMm10,418 chainNetMm10,515 chainNetMm10,690 chainNetMm39,419 chainNetMm39,516 chainNetMm39,691 chainNetMonDom5,419 chainNetMonDom5,516 chainNetMonDom5,691 chainNetRn6,422 chainNetRn6,519 chainNetRn6,694 chainRn6,419 chainRn6,516 chainRn6,691 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5Base,54 intronEst,801 nestedRepeats,124 nestedRepeats,217 netCavPor3,423 netCavPor3,520 netCavPor3,697 netHg19,416 netHg19,513 netHg19,688 netMm10,416 netMm10,513 netMm10,688 netMm39,416 netMm39,513 netMm39,688 netMonDom5,416 netMonDom5,513 netMonDom5,688 netRn6,419 netRn6,516 netRn6,691 quality,69 refGene,242 refSeqComposite,1115 xenoRefGene,202 displays chainCavPor3,124 chainHg19,120 chainMm10,120 chainMm39,120 chainMonDom5,120 chainNetCavPor3,127 chainNetHg19,122 chainNetMm10,122 chainNetMm39,123 chainNetMonDom5,123 chainNetRn6,125 chainRn6,122 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netCavPor3,124 netHg19,120 netMm10,120 netMm39,120 netMonDom5,120 netRn6,122 rmsk,145 simpleRepeat,14 tRNAs,16 xenoMrna,13 dissertation augustusGene,105 distance transMapEnsemblV5,219 transMapEstV5,188 transMapRefSeqV5,188 transMapRnaV5,188 transMapV5,294 distances transMapEnsemblV5,70 transMapEstV5,39 transMapRefSeqV5,39 transMapRnaV5,39 transMapV5,38 distant est,582 intronEst,663 transMapEnsemblV5,268 transMapEstV5,237 transMapRefSeqV5,237 transMapRnaV5,237 transMapV5,63 transMapV5,343 distinguish HLTOGAannotvHg38v1,92 cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,74 distributions augustusGene,83 genscan,42 disulf unipDisulfBond,1 uniprot,472 disulfide unipDisulfBond,4 uniprot,333 uniprot,335 diverged chainCavPor3,915 chainHg19,906 chainMm10,906 chainMm39,906 chainMonDom5,906 chainNetCavPor3,918 chainNetHg19,908 chainNetMm10,908 chainNetMm39,909 chainNetMonDom5,909 chainNetRn6,912 chainRn6,909 nestedRepeats,212 netCavPor3,915 netHg19,906 netMm10,906 netMm39,906 netMonDom5,906 netRn6,909 transMapV5,151 divided uniprot,56 dj blastHg18KG,162 est,752 est,776 intronEst,836 intronEst,860 mrna,469 mrna,493 xenoMrna,544 xenoMrna,568 dl est,780 intronEst,864 mrna,497 xenoMrna,572 dna chainCavPor3,1024 chainHg19,1015 chainMm10,1015 chainMm39,1015 chainMonDom5,1015 chainNetCavPor3,1027 chainNetHg19,1017 chainNetMm10,1017 chainNetMm39,1018 chainNetMonDom5,1018 chainNetRn6,1021 chainRn6,1018 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 geneid,119 genscan,219 microsat,123 nestedRepeats,33 nestedRepeats,41 netCavPor3,1024 netHg19,1015 netMm10,1015 netMm39,1015 netMonDom5,1015 netRn6,1018 refSeqComposite,1081 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 tRNAs,427 tRNAs,488 xenoMrna,108 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 refSeqComposite,389 tRNAs,152 tRNAs,305 transMapEnsemblV5,317 transMapEstV5,286 transMapRefSeqV5,286 transMapRnaV5,286 transMapV5,392 uniprot,168 uniprot,1129 doc rmsk,132 does tRNAs,113 tRNAs,135 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domain unipLocExtra,4 domains unipDomain,1 unipDomain,3 unipLocCytopl,4 unipLocTransMemb,4 uniprot,255 uniprot,257 uniprot,266 uniprot,268 uniprot,277 uniprot,279 uniprot,323 uniprot,325 uniprot,331 uniprot,391 uniprot,514 uniprot,516 uniprot,519 uniprot,550 done augustusGene,265 augustusGene,281 donor genscan,31 double chainCavPor3,132 chainCavPor3,162 chainHg19,128 chainHg19,157 chainMm10,128 chainMm10,157 chainMm39,128 chainMm39,157 chainMonDom5,128 chainMonDom5,157 chainNetCavPor3,135 chainNetCavPor3,165 chainNetHg19,130 chainNetHg19,159 chainNetMm10,130 chainNetMm10,159 chainNetMm39,131 chainNetMm39,160 chainNetMonDom5,131 chainNetMonDom5,160 chainNetRn6,133 chainNetRn6,162 chainRn6,130 chainRn6,159 netCavPor3,132 netCavPor3,162 netHg19,128 netHg19,157 netMm10,128 netMm10,157 netMm39,128 netMm39,157 netMonDom5,128 netMonDom5,157 netRn6,130 netRn6,159 refSeqComposite,1016 double-lined chainCavPor3,222 chainHg19,217 chainMm10,217 chainMm39,217 chainMonDom5,217 chainNetCavPor3,225 chainNetHg19,219 chainNetMm10,219 chainNetMm39,220 chainNetMonDom5,220 chainNetRn6,222 chainRn6,219 netCavPor3,222 netHg19,217 netMm10,217 netMm39,217 netMonDom5,217 netRn6,219 double-sided chainCavPor3,106 chainHg19,102 chainMm10,102 chainMm39,102 chainMonDom5,102 chainNetCavPor3,109 chainNetHg19,104 chainNetMm10,104 chainNetMm39,105 chainNetMonDom5,105 chainNetRn6,107 chainRn6,104 netCavPor3,106 netHg19,102 netMm10,102 netMm39,102 netMonDom5,102 netRn6,104 down ensGene,186 download ensGene,93 ensGene,143 refSeqComposite,1561 refSeqComposite,1704 transMapEnsemblV5,557 transMapEstV5,526 transMapRefSeqV5,526 transMapRnaV5,526 transMapV5,632 uniprot,1744 uniprot,1983 downloaded refSeqComposite,1162 refSeqComposite,1326 refSeqComposite,1515 transMapEnsemblV5,554 transMapEnsemblV5,623 transMapEstV5,523 transMapEstV5,592 transMapRefSeqV5,523 transMapRefSeqV5,592 transMapRnaV5,523 transMapRnaV5,592 transMapV5,629 transMapV5,698 ucscToINSDC,36 uniprot,1741 uniprot,1777 downloading transMapEnsemblV5,633 transMapEstV5,602 transMapRefSeqV5,602 transMapRnaV5,602 transMapV5,708 uniprot,1787 downloads ensGene,74 ensGene,85 refSeqComposite,1329 refSeqComposite,1345 refSeqComposite,1484 refSeqComposite,1574 refSeqComposite,1599 refSeqComposite,1678 rmsk,76 uniprot,1698 downstream refSeqComposite,1453 dr refGene,405 refSeqComposite,1792 xenoRefGene,364 draft gold,13 drastically intronEst,103 drawn gap,55 gold,116 draws uniprot,1532 drosophila augustusGene,213 geneid,187 due HLTOGAannotvHg38v1,207 chainCavPor3,146 chainCavPor3,215 chainCavPor3,227 chainHg19,142 chainHg19,210 chainHg19,222 chainMm10,142 chainMm10,210 chainMm10,222 chainMm39,142 chainMm39,210 chainMm39,222 chainMonDom5,142 chainMonDom5,210 chainMonDom5,222 chainNetCavPor3,149 chainNetCavPor3,218 chainNetCavPor3,230 chainNetHg19,144 chainNetHg19,212 chainNetHg19,224 chainNetMm10,144 chainNetMm10,212 chainNetMm10,224 chainNetMm39,145 chainNetMm39,213 chainNetMm39,225 chainNetMonDom5,145 chainNetMonDom5,213 chainNetMonDom5,225 chainNetRn6,147 chainNetRn6,215 chainNetRn6,227 chainRn6,144 chainRn6,212 chainRn6,224 netCavPor3,146 netCavPor3,215 netCavPor3,227 netHg19,142 netHg19,210 netHg19,222 netMm10,142 netMm10,210 netMm10,222 netMm39,142 netMm39,210 netMm39,222 netMonDom5,142 netMonDom5,210 netMonDom5,222 netRn6,144 netRn6,212 netRn6,224 refSeqComposite,975 uniprot,848 uniprot,919 uniprot,1368 duplicate uniprot,594 duplication chainCavPor3,1062 chainHg19,1053 chainMm10,1053 chainMm39,1053 chainMonDom5,1053 chainNetCavPor3,1065 chainNetHg19,1055 chainNetMm10,1055 chainNetMm39,1056 chainNetMonDom5,1056 chainNetRn6,1059 chainRn6,1056 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netCavPor3,1062 netHg19,1053 netMm10,1053 netMm39,1053 netMonDom5,1053 netRn6,1056 duplications transMapEnsemblV5,310 transMapEnsemblV5,507 transMapEstV5,279 transMapEstV5,476 transMapRefSeqV5,279 transMapRefSeqV5,476 transMapRnaV5,279 transMapRnaV5,476 transMapV5,385 transMapV5,582 durbin tRNAs,396 during chainCavPor3,820 chainHg19,811 chainMm10,811 chainMm39,811 chainMonDom5,811 chainNetCavPor3,823 chainNetHg19,813 chainNetMm10,813 chainNetMm39,814 chainNetMonDom5,814 chainNetRn6,817 chainRn6,814 gap,117 netCavPor3,820 netHg19,811 netMm10,811 netMm39,811 netMonDom5,811 netRn6,814 dynamic chainCavPor3,653 chainHg19,644 chainMm10,644 chainMm39,644 chainMonDom5,644 chainNetCavPor3,656 chainNetHg19,646 chainNetMm10,646 chainNetMm39,647 chainNetMonDom5,647 chainNetRn6,650 chainRn6,647 netCavPor3,653 netHg19,644 netMm10,644 netMm39,644 netMonDom5,644 netRn6,647 e HLTOGAannotvHg38v1,339 ensGene,173 geneid,156 geneid,181 tRNAs,352 uniprot,2021 e.g chainCavPor3,374 chainHg19,367 chainMm10,367 chainMm39,367 chainMonDom5,367 chainNetCavPor3,377 chainNetHg19,369 chainNetMm10,369 chainNetMm39,370 chainNetMonDom5,370 chainNetRn6,373 chainRn6,370 netCavPor3,374 netHg19,367 netMm10,367 netMm39,367 netMonDom5,367 netRn6,370 refSeqComposite,1132 uniprot,398 uniprot,467 e247 transMapEnsemblV5,815 transMapEstV5,784 transMapRefSeqV5,784 transMapRnaV5,784 transMapV5,890 eabn3107 HLTOGAannotvHg38v1,370 each HLTOGAannotvHg38v1,132 blastHg18KG,68 chainCavPor3,260 chainHg19,255 chainMm10,255 chainMm39,255 chainMonDom5,255 chainNetCavPor3,263 chainNetHg19,257 chainNetMm10,257 chainNetMm39,258 chainNetMonDom5,258 chainNetRn6,260 chainRn6,257 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 est,214 genscan,99 intronEst,295 mrna,160 nestedRepeats,120 netCavPor3,260 netHg19,255 netMm10,255 netMm39,255 netMonDom5,255 netRn6,257 quality,21 quality,29 refSeqComposite,538 refSeqComposite,1425 transMapEnsemblV5,386 transMapEnsemblV5,400 transMapEnsemblV5,409 transMapEnsemblV5,428 transMapEstV5,355 transMapEstV5,369 transMapEstV5,378 transMapEstV5,397 transMapRefSeqV5,355 transMapRefSeqV5,369 transMapRefSeqV5,378 transMapRefSeqV5,397 transMapRnaV5,355 transMapRnaV5,369 transMapRnaV5,378 transMapRnaV5,397 transMapV5,461 transMapV5,475 transMapV5,484 transMapV5,503 uniprot,151 xenoMrna,235 echo uniprot,1925 eddy tRNAs,65 tRNAs,394 tRNAs,442 edge uniprot,1182 uniprot,1451 editors genscan,195 educated tRNAs,255 effect est,597 intronEst,678 either chainCavPor3,129 chainHg19,125 chainMm10,125 chainMm39,125 chainMonDom5,125 chainNetCavPor3,132 chainNetHg19,127 chainNetMm10,127 chainNetMm39,128 chainNetMonDom5,128 chainNetRn6,130 chainRn6,127 gap,34 netCavPor3,129 netHg19,125 netMm10,125 netMm39,125 netMonDom5,125 netRn6,127 rmsk,273 uniprot,816 uniprot,1398 electronic nestedRepeats,348 rmsk,371 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 tRNAs,302 eliminate est,669 intronEst,750 eliminating intronEst,109 elsevier genscan,202 emerged chainCavPor3,826 chainHg19,817 chainMm10,817 chainMm39,817 chainMonDom5,817 chainNetCavPor3,829 chainNetHg19,819 chainNetMm10,819 chainNetMm39,820 chainNetMonDom5,820 chainNetRn6,823 chainRn6,820 est,567 intronEst,648 netCavPor3,826 netHg19,817 netMm10,817 netMm39,817 netMonDom5,817 netRn6,820 encode HLTOGAannotvHg38v1,161 HLTOGAannotvHg38v1,191 HLTOGAannotvHg38v1,267 HLTOGAannotvHg38v1,290 tRNAs,171 encodes tRNAs,143 end est,517 est,535 est,545 est,586 intronEst,598 intronEst,616 intronEst,626 intronEst,667 refSeqComposite,1050 refSeqComposite,1556 rmsk,245 transMapEnsemblV5,670 transMapEstV5,639 transMapRefSeqV5,639 transMapRnaV5,639 transMapV5,745 uniprot,126 uniprot,210 uniprot,1823 ends intronEst,90 enough HLTOGAannotvHg38v1,254 refSeqComposite,1024 ensembl ensGene,1 ensGene,3 ensGene,16 ensGene,38 ensGene,57 ensGene,151 ensGene,162 ensGene,191 transMapEnsemblV5,2 transMapEnsemblV5,4 transMapEnsemblV5,20 transMapEnsemblV5,40 transMapEnsemblV5,47 transMapEnsemblV5,58 transMapEnsemblV5,589 transMapEnsemblV5,705 transMapEstV5,558 transMapEstV5,674 transMapRefSeqV5,558 transMapRefSeqV5,674 transMapRnaV5,558 transMapRnaV5,674 transMapV5,664 transMapV5,780 uniprot,731 uniprot,834 uniprot,865 ensgene.txt.gz ensGene,88 ensure transMapEnsemblV5,382 transMapEstV5,351 transMapRefSeqV5,351 transMapRnaV5,351 transMapV5,457 enter chainCavPor3,368 chainHg19,361 chainMm10,361 chainMm39,361 chainMonDom5,361 chainNetCavPor3,371 chainNetHg19,363 chainNetMm10,363 chainNetMm39,364 chainNetMonDom5,364 chainNetRn6,367 chainRn6,364 netCavPor3,368 netHg19,361 netMm10,361 netMm39,361 netMonDom5,361 netRn6,364 entered est,251 est,261 intronEst,332 intronEst,342 mrna,197 mrna,207 xenoMrna,272 xenoMrna,282 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 entirely uniprot,1434 entries refSeqComposite,1354 ermolaeva refGene,368 refSeqComposite,1755 xenoRefGene,327 errors refSeqComposite,949 especially est,152 intronEst,233 mrna,98 xenoMrna,173 est est,9 est,84 est,180 est,448 est,611 est,632 est,683 est,729 intronEst,11 intronEst,60 intronEst,75 intronEst,100 intronEst,125 intronEst,165 intronEst,261 intronEst,529 intronEst,692 intronEst,713 intronEst,764 intronEst,813 mrna,9 refSeqComposite,263 refSeqComposite,363 transMapEnsemblV5,686 transMapEstV5,4 transMapEstV5,18 transMapEstV5,655 transMapRefSeqV5,655 transMapRnaV5,655 transMapV5,761 xenoMrna,9 established refSeqComposite,684 ests est,2 est,4 est,20 est,26 est,190 est,295 est,310 est,351 est,369 est,487 est,532 est,543 est,644 est,671 intronEst,2 intronEst,4 intronEst,22 intronEst,38 intronEst,113 intronEst,119 intronEst,153 intronEst,271 intronEst,376 intronEst,391 intronEst,432 intronEst,450 intronEst,568 intronEst,613 intronEst,624 intronEst,725 intronEst,752 transMapEnsemblV5,176 transMapEnsemblV5,598 transMapEstV5,2 transMapEstV5,145 transMapEstV5,567 transMapRefSeqV5,145 transMapRefSeqV5,567 transMapRnaV5,145 transMapRnaV5,567 transMapV5,251 transMapV5,673 et HLTOGAannotvHg38v1,354 cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 ensGene,45 ensGene,188 refGene,378 refSeqComposite,1765 transMapEnsemblV5,732 transMapEstV5,701 transMapRefSeqV5,701 transMapRnaV5,701 transMapV5,807 xenoRefGene,337 etc uniprot,479 eukaryotes tRNAs,101 eukaryotic tRNAs,483 evaluate uniprot,1461 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 even est,606 est,613 intronEst,687 intronEst,694 uniprot,136 every chainCavPor3,276 chainHg19,270 chainMm10,270 chainMm39,270 chainMonDom5,270 chainNetCavPor3,279 chainNetHg19,272 chainNetMm10,272 chainNetMm39,273 chainNetMonDom5,273 chainNetRn6,275 chainRn6,272 netCavPor3,276 netHg19,270 netMm10,270 netMm39,270 netMonDom5,270 netRn6,272 refSeqComposite,475 uniprot,1571 evidence HLTOGAannotvHg38v1,196 HLTOGAannotvHg38v1,250 HLTOGAannotvHg38v1,283 gold,55 intronEst,63 refSeqComposite,260 refSeqComposite,275 evolution chainCavPor3,1059 chainHg19,1050 chainMm10,1050 chainMm39,1050 chainMonDom5,1050 chainNetCavPor3,1062 chainNetHg19,1052 chainNetMm10,1052 chainNetMm39,1053 chainNetMonDom5,1053 chainNetRn6,1056 chainRn6,1053 netCavPor3,1059 netHg19,1050 netMm10,1050 netMm39,1050 netMonDom5,1050 netRn6,1053 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 transMapEnsemblV5,69 transMapEstV5,38 transMapRefSeqV5,38 transMapRnaV5,38 transMapV5,37 ew blastHg18KG,160 est,756 intronEst,840 mrna,473 xenoMrna,548 ewing transMapEnsemblV5,726 transMapEstV5,695 transMapRefSeqV5,695 transMapRnaV5,695 transMapV5,801 exact tRNAs,264 uniprot,1622 uniprot,1747 example est,183 est,236 intronEst,264 intronEst,317 mrna,129 mrna,182 refSeqComposite,1530 rmsk,256 transMapEnsemblV5,445 transMapEnsemblV5,657 transMapEstV5,414 transMapEstV5,626 transMapRefSeqV5,414 transMapRefSeqV5,626 transMapRnaV5,414 transMapRnaV5,626 transMapV5,96 transMapV5,520 transMapV5,732 uniprot,1450 uniprot,1811 uniprot,1901 xenoMrna,204 xenoMrna,257 examples refSeqComposite,405 except refSeqComposite,40 uniprot,508 exclude est,131 est,336 est,342 intronEst,212 intronEst,417 intronEst,423 mrna,77 mrna,282 mrna,288 xenoMrna,152 xenoMrna,357 xenoMrna,363 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 uniprot,1918 exhibits HLTOGAannotvHg38v1,154 HLTOGAannotvHg38v1,183 HLTOGAannotvHg38v1,230 exist chainCavPor3,407 chainHg19,400 chainMm10,400 chainMm39,400 chainMonDom5,400 chainNetCavPor3,410 chainNetHg19,402 chainNetMm10,402 chainNetMm39,403 chainNetMonDom5,403 chainNetRn6,406 chainRn6,403 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,86 netCavPor3,407 netHg19,400 netMm10,400 netMm39,400 netMonDom5,400 netRn6,403 refSeqComposite,292 exists refSeqComposite,329 exon HLTOGAannotvHg38v1,312 augustusGene,86 blastHg18KG,58 blastHg18KG,69 blastHg18KG,101 blastHg18KG,114 exons HLTOGAannotvHg38v1,114 blastHg18KG,84 chainCavPor3,50 chainHg19,48 chainMm10,48 chainMm39,48 chainMonDom5,48 chainNetCavPor3,53 chainNetHg19,50 chainNetMm10,50 chainNetMm39,51 chainNetMonDom5,51 chainNetRn6,52 chainRn6,49 geneid,89 geneid,95 geneid,126 geneid,141 genscan,44 netCavPor3,50 netHg19,48 netMm10,48 netMm39,48 netMonDom5,48 netRn6,49 transMapEnsemblV5,739 transMapEstV5,708 transMapRefSeqV5,708 transMapRnaV5,708 transMapV5,814 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expanded refSeqComposite,661 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense intronEst,107 transMapEnsemblV5,295 transMapEstV5,264 transMapRefSeqV5,264 transMapRnaV5,264 transMapV5,370 experimentally uniprot,304 explanation gc5Base,66 quality,79 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 ensGene,62 refSeqComposite,1302 uniprot,1716 expressed est,17 est,191 intronEst,19 intronEst,272 mrna,137 xenoMrna,212 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extended blastHg18KG,117 extending blastHg18KG,103 extra transMapEnsemblV5,549 transMapEstV5,518 transMapRefSeqV5,518 transMapRnaV5,518 transMapV5,624 extracellular unipLocExtra,1 unipLocExtra,3 uniprot,254 uniprot,262 uniprot,513 uniprot,566 extract refSeqComposite,1532 extracted nestedRepeats,23 f chainCavPor3,1032 chainHg19,1023 chainMm10,1023 chainMm39,1023 chainMonDom5,1023 chainNetCavPor3,1035 chainNetHg19,1025 chainNetMm10,1025 chainNetMm39,1026 chainNetMonDom5,1026 chainNetRn6,1029 chainRn6,1026 gold,150 netCavPor3,1032 netHg19,1023 netMm10,1023 netMm39,1023 netMonDom5,1023 netRn6,1026 refGene,365 refSeqComposite,1752 tRNAs,473 xenoRefGene,324 facilitate genscan,106 uniprot,1852 factor est,228 intronEst,309 mrna,174 xenoMrna,249 false tRNAs,87 famiglietti uniprot,2018 families uniprot,1395 family rmsk,249 faq augustusGene,45 ensGene,28 genscan,60 nestedRepeats,298 refGene,80 refSeqComposite,139 rmsk,321 transMapEnsemblV5,576 transMapEstV5,545 transMapRefSeqV5,545 transMapRnaV5,545 transMapV5,651 uniprot,1839 far uniprot,599 farrell refGene,370 refSeqComposite,1757 xenoRefGene,329 fasta refSeqComposite,1658 feature chainCavPor3,246 chainHg19,241 chainMm10,241 chainMm39,241 chainMonDom5,241 chainNetCavPor3,249 chainNetHg19,243 chainNetMm10,243 chainNetMm39,244 chainNetMonDom5,244 chainNetRn6,246 chainRn6,243 est,386 genscan,129 intronEst,467 mrna,332 netCavPor3,246 netHg19,241 netMm10,241 netMm39,241 netMonDom5,241 netRn6,243 refGene,185 refGene,218 refSeqComposite,819 refSeqComposite,852 transMapEnsemblV5,116 transMapEstV5,85 transMapRefSeqV5,85 transMapRnaV5,85 transMapV5,191 uniprot,64 uniprot,524 uniprot,613 xenoMrna,407 xenoRefGene,145 xenoRefGene,178 features refGene,121 refSeqComposite,720 tRNAs,185 tRNAs,218 tRNAs,238 tRNAs,276 transMapEnsemblV5,651 transMapEstV5,620 transMapRefSeqV5,620 transMapRnaV5,620 transMapV5,726 uniprot,694 uniprot,1805 xenoRefGene,81 feb chainCavPor3,6 chainCavPor3,69 chainCavPor3,307 chainHg19,4 chainHg19,66 chainHg19,300 chainNetCavPor3,7 chainNetCavPor3,72 chainNetCavPor3,310 chainNetCavPor3Viewchain,4 chainNetCavPor3Viewnet,4 chainNetHg19,4 chainNetHg19,68 chainNetHg19,302 chainNetHg19Viewchain,3 chainNetHg19Viewnet,3 netCavPor3,6 netCavPor3,69 netCavPor3,307 netHg19,4 netHg19,66 netHg19,300 fed chainCavPor3,618 chainHg19,610 chainMm10,610 chainMm39,610 chainMonDom5,610 chainNetCavPor3,621 chainNetHg19,612 chainNetMm10,612 chainNetMm39,613 chainNetMonDom5,613 chainNetRn6,616 chainRn6,613 netCavPor3,618 netHg19,610 netMm10,610 netMm39,610 netMonDom5,610 netRn6,613 feedback refGene,47 refSeqComposite,106 uniprot,1445 uniprot,1961 fewer tRNAs,91 transMapV5,159 fichant tRNAs,32 tRNAs,417 field augustusGene,120 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 refSeqComposite,1167 refSeqComposite,1376 refSeqComposite,1387 refSeqComposite,1652 uniprot,884 uniprot,1511 uniprot,1614 uniprot,1737 uniprot,1756 filenames uniprot,1748 uniprot,1894 files ensGene,78 refSeqComposite,1160 refSeqComposite,1477 transMapEnsemblV5,544 transMapEnsemblV5,578 transMapEstV5,513 transMapEstV5,547 transMapRefSeqV5,513 transMapRefSeqV5,547 transMapRnaV5,513 transMapRnaV5,547 transMapV5,619 transMapV5,653 uniprot,1863 fill chainCavPor3,850 chainCavPor3,883 chainHg19,841 chainHg19,874 chainMm10,841 chainMm10,874 chainMm39,841 chainMm39,874 chainMonDom5,841 chainMonDom5,874 chainNetCavPor3,853 chainNetCavPor3,886 chainNetHg19,843 chainNetHg19,876 chainNetMm10,843 chainNetMm10,876 chainNetMm39,844 chainNetMm39,877 chainNetMonDom5,844 chainNetMonDom5,877 chainNetRn6,847 chainNetRn6,880 chainRn6,844 chainRn6,877 netCavPor3,850 netCavPor3,883 netHg19,841 netHg19,874 netMm10,841 netMm10,874 netMm39,841 netMm39,874 netMonDom5,841 netMonDom5,874 netRn6,844 netRn6,877 filled chainCavPor3,416 chainCavPor3,435 chainCavPor3,832 chainCavPor3,905 chainHg19,409 chainHg19,428 chainHg19,823 chainHg19,896 chainMm10,409 chainMm10,428 chainMm10,823 chainMm10,896 chainMm39,409 chainMm39,428 chainMm39,823 chainMm39,896 chainMonDom5,409 chainMonDom5,428 chainMonDom5,823 chainMonDom5,896 chainNetCavPor3,419 chainNetCavPor3,438 chainNetCavPor3,835 chainNetCavPor3,908 chainNetHg19,411 chainNetHg19,430 chainNetHg19,825 chainNetHg19,898 chainNetMm10,411 chainNetMm10,430 chainNetMm10,825 chainNetMm10,898 chainNetMm39,412 chainNetMm39,431 chainNetMm39,826 chainNetMm39,899 chainNetMonDom5,412 chainNetMonDom5,431 chainNetMonDom5,826 chainNetMonDom5,899 chainNetRn6,415 chainNetRn6,434 chainNetRn6,829 chainNetRn6,902 chainRn6,412 chainRn6,431 chainRn6,826 chainRn6,899 netCavPor3,416 netCavPor3,435 netCavPor3,832 netCavPor3,905 netHg19,409 netHg19,428 netHg19,823 netHg19,896 netMm10,409 netMm10,428 netMm10,823 netMm10,896 netMm39,409 netMm39,428 netMm39,823 netMm39,896 netMonDom5,409 netMonDom5,428 netMonDom5,823 netMonDom5,896 netRn6,412 netRn6,431 netRn6,826 netRn6,899 filter chainCavPor3,380 chainHg19,373 chainMm10,373 chainMm39,373 chainMonDom5,373 chainNetCavPor3,383 chainNetHg19,375 chainNetMm10,375 chainNetMm39,376 chainNetMonDom5,376 chainNetRn6,379 chainRn6,376 est,116 est,165 est,178 est,187 est,234 est,275 est,299 est,317 est,355 est,373 genscan,82 intronEst,197 intronEst,246 intronEst,259 intronEst,268 intronEst,315 intronEst,356 intronEst,380 intronEst,398 intronEst,436 intronEst,454 mrna,62 mrna,111 mrna,124 mrna,133 mrna,180 mrna,221 mrna,245 mrna,263 mrna,301 mrna,319 netCavPor3,380 netHg19,373 netMm10,373 netMm39,373 netMonDom5,373 netRn6,376 uniprot,187 uniprot,664 xenoMrna,137 xenoMrna,186 xenoMrna,199 xenoMrna,208 xenoMrna,255 xenoMrna,296 xenoMrna,320 xenoMrna,338 xenoMrna,376 xenoMrna,394 filtered est,338 intronEst,419 mrna,284 transMapEnsemblV5,77 transMapEnsemblV5,349 transMapEstV5,46 transMapEstV5,318 transMapRefSeqV5,46 transMapRefSeqV5,318 transMapRnaV5,46 transMapRnaV5,318 transMapV5,45 transMapV5,424 uniprot,1480 uniprot,1499 xenoMrna,359 filtering est,277 intronEst,358 mrna,223 transMapEnsemblV5,236 transMapEnsemblV5,304 transMapEstV5,205 transMapEstV5,273 transMapRefSeqV5,205 transMapRefSeqV5,273 transMapRnaV5,205 transMapRnaV5,273 transMapV5,311 transMapV5,379 uniprot,693 uniprot,912 uniprot,1154 xenoMrna,298 filters tRNAs,55 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 uniprot,1153 finally blastHg18KG,80 geneid,120 find chainCavPor3,662 chainHg19,653 chainMm10,653 chainMm39,653 chainMonDom5,653 chainNetCavPor3,665 chainNetHg19,655 chainNetMm10,655 chainNetMm39,656 chainNetMonDom5,656 chainNetRn6,659 chainRn6,656 netCavPor3,662 netHg19,653 netMm10,653 netMm39,653 netMonDom5,653 netRn6,656 rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainCavPor3,286 chainHg19,280 chainMm10,280 chainMm39,280 chainMonDom5,280 chainNetCavPor3,289 chainNetHg19,282 chainNetMm10,282 chainNetMm39,283 chainNetMonDom5,283 chainNetRn6,285 chainRn6,282 netCavPor3,286 netHg19,280 netMm10,280 netMm39,280 netMonDom5,280 netRn6,282 transMapEnsemblV5,774 transMapEstV5,743 transMapRefSeqV5,743 transMapRnaV5,743 transMapV5,849 finds transMapV5,158 finger uniprot,327 fingerprint gap,143 finished gold,152 transMapEnsemblV5,360 transMapEstV5,329 transMapRefSeqV5,329 transMapRnaV5,329 transMapV5,435 first blastHg18KG,36 chainCavPor3,790 chainHg19,781 chainMm10,781 chainMm39,781 chainMonDom5,781 chainNetCavPor3,793 chainNetHg19,783 chainNetMm10,783 chainNetMm39,784 chainNetMonDom5,784 chainNetRn6,787 chainRn6,784 geneid,68 netCavPor3,790 netHg19,781 netMm10,781 netMm39,781 netMonDom5,781 netRn6,784 refSeqComposite,1422 uniprot,70 xenoMrna,70 fish augustusGene,201 fit chainCavPor3,810 chainHg19,801 chainMm10,801 chainMm39,801 chainMonDom5,801 chainNetCavPor3,813 chainNetHg19,803 chainNetMm10,803 chainNetMm39,804 chainNetMonDom5,804 chainNetRn6,807 chainRn6,804 nestedRepeats,175 netCavPor3,810 netHg19,801 netMm10,801 netMm39,801 netMonDom5,801 netRn6,804 refSeqComposite,391 five refSeqComposite,869 refSeqComposite,885 fix uniprot,851 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 fly augustusGene,214 fold tRNAs,308 follow refSeqComposite,594 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainCavPor3,671 chainHg19,662 chainMm10,662 chainMm39,662 chainMonDom5,662 chainNetCavPor3,674 chainNetHg19,664 chainNetMm10,664 chainNetMm39,665 chainNetMonDom5,665 chainNetRn6,668 chainRn6,665 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,67 genscan,81 netCavPor3,671 netHg19,662 netMm10,662 netMm39,662 netMonDom5,662 netRn6,665 refSeqComposite,448 refSeqComposite,1543 tRNAs,364 transMapEnsemblV5,586 transMapEstV5,555 transMapRefSeqV5,555 transMapRnaV5,555 transMapV5,661 follows est,49 genscan,67 intronEst,133 mrna,30 refGene,87 refSeqComposite,891 refSeqComposite,1401 transMapEnsemblV5,97 transMapEnsemblV5,214 transMapEstV5,66 transMapEstV5,183 transMapRefSeqV5,66 transMapRefSeqV5,183 transMapRnaV5,66 transMapRnaV5,183 transMapV5,172 transMapV5,289 xenoMrna,35 xenoRefGene,47 for HLTOGAannotvHg38v1,55 HLTOGAannotvHg38v1,59 augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 blastHg18KG,147 chainCavPor3,259 chainCavPor3,275 chainCavPor3,285 chainCavPor3,292 chainCavPor3,493 chainHg19,254 chainHg19,269 chainHg19,279 chainHg19,286 chainHg19,486 chainMm10,254 chainMm10,269 chainMm10,279 chainMm10,286 chainMm10,486 chainMm39,254 chainMm39,269 chainMm39,279 chainMm39,286 chainMm39,486 chainMonDom5,254 chainMonDom5,269 chainMonDom5,279 chainMonDom5,286 chainMonDom5,486 chainNetCavPor3,262 chainNetCavPor3,278 chainNetCavPor3,288 chainNetCavPor3,295 chainNetCavPor3,496 chainNetHg19,256 chainNetHg19,271 chainNetHg19,281 chainNetHg19,288 chainNetHg19,488 chainNetMm10,256 chainNetMm10,271 chainNetMm10,281 chainNetMm10,288 chainNetMm10,488 chainNetMm39,257 chainNetMm39,272 chainNetMm39,282 chainNetMm39,289 chainNetMm39,489 chainNetMonDom5,257 chainNetMonDom5,272 chainNetMonDom5,282 chainNetMonDom5,289 chainNetMonDom5,489 chainNetRn6,259 chainNetRn6,274 chainNetRn6,284 chainNetRn6,291 chainNetRn6,492 chainRn6,256 chainRn6,271 chainRn6,281 chainRn6,288 chainRn6,489 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 ensGene,17 ensGene,30 ensGene,72 ensGene,79 ensGene,98 ensGene,152 ensGene,157 est,53 est,111 est,182 est,213 est,235 est,408 est,419 est,432 est,480 gc5Base,64 geneid,117 geneid,150 genscan,49 genscan,71 genscan,124 genscan,131 genscan,174 intronEst,114 intronEst,137 intronEst,192 intronEst,263 intronEst,294 intronEst,316 intronEst,489 intronEst,500 intronEst,513 intronEst,561 microsat,95 mrna,34 mrna,57 mrna,128 mrna,159 mrna,181 mrna,345 mrna,358 mrna,371 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netCavPor3,259 netCavPor3,275 netCavPor3,285 netCavPor3,292 netCavPor3,493 netHg19,254 netHg19,269 netHg19,279 netHg19,286 netHg19,486 netMm10,254 netMm10,269 netMm10,279 netMm10,286 netMm10,486 netMm39,254 netMm39,269 netMm39,279 netMm39,286 netMm39,486 netMonDom5,254 netMonDom5,269 netMonDom5,279 netMonDom5,286 netMonDom5,486 netRn6,256 netRn6,271 netRn6,281 netRn6,288 netRn6,489 quality,77 refGene,48 refGene,64 refGene,69 refGene,91 refGene,213 refSeqComposite,41 refSeqComposite,73 refSeqComposite,92 refSeqComposite,107 refSeqComposite,123 refSeqComposite,128 refSeqComposite,235 refSeqComposite,244 refSeqComposite,330 refSeqComposite,394 refSeqComposite,452 refSeqComposite,474 refSeqComposite,537 refSeqComposite,598 refSeqComposite,719 refSeqComposite,743 refSeqComposite,847 refSeqComposite,1178 refSeqComposite,1290 refSeqComposite,1331 refSeqComposite,1441 refSeqComposite,1520 refSeqComposite,1529 refSeqComposite,1660 refSeqComposite,1688 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 tRNAs,100 tRNAs,230 tRNAs,447 transMapEnsemblV5,41 transMapEnsemblV5,45 transMapEnsemblV5,67 transMapEnsemblV5,101 transMapEnsemblV5,129 transMapEnsemblV5,146 transMapEnsemblV5,189 transMapEnsemblV5,215 transMapEnsemblV5,233 transMapEnsemblV5,264 transMapEnsemblV5,266 transMapEnsemblV5,284 transMapEnsemblV5,288 transMapEnsemblV5,385 transMapEnsemblV5,399 transMapEnsemblV5,408 transMapEnsemblV5,444 transMapEnsemblV5,520 transMapEnsemblV5,535 transMapEnsemblV5,564 transMapEnsemblV5,628 transMapEnsemblV5,632 transMapEnsemblV5,656 transMapEnsemblV5,799 transMapEstV5,36 transMapEstV5,70 transMapEstV5,98 transMapEstV5,115 transMapEstV5,158 transMapEstV5,184 transMapEstV5,202 transMapEstV5,233 transMapEstV5,235 transMapEstV5,253 transMapEstV5,257 transMapEstV5,354 transMapEstV5,368 transMapEstV5,377 transMapEstV5,413 transMapEstV5,489 transMapEstV5,504 transMapEstV5,533 transMapEstV5,597 transMapEstV5,601 transMapEstV5,625 transMapEstV5,768 transMapRefSeqV5,36 transMapRefSeqV5,70 transMapRefSeqV5,98 transMapRefSeqV5,115 transMapRefSeqV5,158 transMapRefSeqV5,184 transMapRefSeqV5,202 transMapRefSeqV5,233 transMapRefSeqV5,235 transMapRefSeqV5,253 transMapRefSeqV5,257 transMapRefSeqV5,354 transMapRefSeqV5,368 transMapRefSeqV5,377 transMapRefSeqV5,413 transMapRefSeqV5,489 transMapRefSeqV5,504 transMapRefSeqV5,533 transMapRefSeqV5,597 transMapRefSeqV5,601 transMapRefSeqV5,625 transMapRefSeqV5,768 transMapRnaV5,36 transMapRnaV5,70 transMapRnaV5,98 transMapRnaV5,115 transMapRnaV5,158 transMapRnaV5,184 transMapRnaV5,202 transMapRnaV5,233 transMapRnaV5,235 transMapRnaV5,253 transMapRnaV5,257 transMapRnaV5,354 transMapRnaV5,368 transMapRnaV5,377 transMapRnaV5,413 transMapRnaV5,489 transMapRnaV5,504 transMapRnaV5,533 transMapRnaV5,597 transMapRnaV5,601 transMapRnaV5,625 transMapRnaV5,768 transMapV5,35 transMapV5,61 transMapV5,95 transMapV5,97 transMapV5,150 transMapV5,176 transMapV5,204 transMapV5,221 transMapV5,264 transMapV5,290 transMapV5,308 transMapV5,339 transMapV5,341 transMapV5,359 transMapV5,363 transMapV5,460 transMapV5,474 transMapV5,483 transMapV5,519 transMapV5,595 transMapV5,610 transMapV5,639 transMapV5,703 transMapV5,707 transMapV5,731 transMapV5,874 ucscToINSDC,45 uniprot,75 uniprot,78 uniprot,401 uniprot,405 uniprot,462 uniprot,497 uniprot,532 uniprot,549 uniprot,697 uniprot,739 uniprot,743 uniprot,770 uniprot,842 uniprot,846 uniprot,861 uniprot,886 uniprot,964 uniprot,997 uniprot,1017 uniprot,1023 uniprot,1057 uniprot,1070 uniprot,1097 uniprot,1119 uniprot,1211 uniprot,1238 uniprot,1320 uniprot,1393 uniprot,1427 uniprot,1627 uniprot,1644 uniprot,1651 uniprot,1661 uniprot,1726 uniprot,1782 uniprot,1786 uniprot,1810 uniprot,1833 uniprot,1840 uniprot,1869 uniprot,1977 uniprot,1982 uniprot,2034 xenoMrna,39 xenoMrna,62 xenoMrna,132 xenoMrna,203 xenoMrna,234 xenoMrna,256 xenoMrna,420 xenoMrna,433 xenoMrna,446 xenoRefGene,19 xenoRefGene,51 xenoRefGene,173 form uniprot,1665 format chainCavPor3,609 chainHg19,601 chainMm10,601 chainMm39,601 chainMonDom5,601 chainNetCavPor3,612 chainNetHg19,603 chainNetMm10,603 chainNetMm39,604 chainNetMonDom5,604 chainNetRn6,607 chainRn6,604 ensGene,77 ensGene,97 netCavPor3,609 netHg19,601 netMm10,601 netMm39,601 netMonDom5,601 netRn6,604 refSeqComposite,1168 refSeqComposite,1357 refSeqComposite,1377 refSeqComposite,1403 refSeqComposite,1417 refSeqComposite,1564 refSeqComposite,1578 refSeqComposite,1586 refSeqComposite,1659 transMapEnsemblV5,417 transMapEstV5,386 transMapRefSeqV5,386 transMapRnaV5,386 transMapV5,492 formats refSeqComposite,1177 uniprot,885 uniprot,1865 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainCavPor3,442 chainHg19,435 chainMm10,435 chainMm39,435 chainMonDom5,435 chainNetCavPor3,445 chainNetHg19,437 chainNetMm10,437 chainNetMm39,438 chainNetMonDom5,438 chainNetRn6,441 chainRn6,438 netCavPor3,442 netHg19,435 netMm10,435 netMm39,435 netMonDom5,435 netRn6,438 found augustusGene,100 ensGene,139 mrna,412 refSeqComposite,1192 refSeqComposite,1390 refSeqComposite,1675 refSeqComposite,1700 transMapEnsemblV5,640 transMapEstV5,609 transMapRefSeqV5,609 transMapRnaV5,609 transMapV5,715 uniprot,241 uniprot,1128 uniprot,1271 uniprot,1328 uniprot,1557 uniprot,1751 uniprot,1794 xenoMrna,486 four chainCavPor3,510 chainHg19,503 chainMm10,503 chainMm39,503 chainMonDom5,503 chainNetCavPor3,513 chainNetHg19,505 chainNetMm10,505 chainNetMm39,506 chainNetMonDom5,506 chainNetRn6,509 chainRn6,506 netCavPor3,510 netHg19,503 netMm10,503 netMm39,503 netMonDom5,503 netRn6,506 xenoMrna,117 fragment gap,72 gap,126 gold,132 fragments est,39 gold,4 intronEst,51 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 free uniprot,1435 from HLTOGAannotvHg38v1,21 HLTOGAannotvHg38v1,94 HLTOGAannotvHg38v1,330 augustusGene,19 blastHg18KG,22 blastHg18KG,40 chainCavPor3,178 chainCavPor3,305 chainCavPor3,562 chainCavPor3,585 chainCavPor3,767 chainCavPor3,940 chainCavPor3,972 chainHg19,173 chainHg19,298 chainHg19,555 chainHg19,577 chainHg19,758 chainHg19,931 chainHg19,963 chainMm10,173 chainMm10,298 chainMm10,555 chainMm10,577 chainMm10,758 chainMm10,931 chainMm10,963 chainMm39,173 chainMm39,298 chainMm39,555 chainMm39,577 chainMm39,758 chainMm39,931 chainMm39,963 chainMonDom5,173 chainMonDom5,298 chainMonDom5,555 chainMonDom5,577 chainMonDom5,758 chainMonDom5,931 chainMonDom5,963 chainNetCavPor3,181 chainNetCavPor3,308 chainNetCavPor3,565 chainNetCavPor3,588 chainNetCavPor3,770 chainNetCavPor3,943 chainNetCavPor3,975 chainNetHg19,175 chainNetHg19,300 chainNetHg19,557 chainNetHg19,579 chainNetHg19,760 chainNetHg19,933 chainNetHg19,965 chainNetMm10,175 chainNetMm10,300 chainNetMm10,557 chainNetMm10,579 chainNetMm10,760 chainNetMm10,933 chainNetMm10,965 chainNetMm39,176 chainNetMm39,301 chainNetMm39,558 chainNetMm39,580 chainNetMm39,761 chainNetMm39,934 chainNetMm39,966 chainNetMonDom5,176 chainNetMonDom5,301 chainNetMonDom5,558 chainNetMonDom5,580 chainNetMonDom5,761 chainNetMonDom5,934 chainNetMonDom5,966 chainNetRn6,178 chainNetRn6,303 chainNetRn6,561 chainNetRn6,583 chainNetRn6,764 chainNetRn6,937 chainNetRn6,969 chainRn6,175 chainRn6,300 chainRn6,558 chainRn6,580 chainRn6,761 chainRn6,934 chainRn6,966 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ensGene,106 ensGene,112 est,404 est,452 est,473 est,583 est,601 est,645 est,728 gap,132 geneid,16 geneid,92 geneid,121 genscan,15 gold,3 intronEst,485 intronEst,533 intronEst,554 intronEst,664 intronEst,682 intronEst,726 intronEst,812 mrna,5 mrna,445 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netCavPor3,178 netCavPor3,305 netCavPor3,562 netCavPor3,585 netCavPor3,767 netCavPor3,940 netCavPor3,972 netHg19,173 netHg19,298 netHg19,555 netHg19,577 netHg19,758 netHg19,931 netHg19,963 netMm10,173 netMm10,298 netMm10,555 netMm10,577 netMm10,758 netMm10,931 netMm10,963 netMm39,173 netMm39,298 netMm39,555 netMm39,577 netMm39,758 netMm39,931 netMm39,963 netMonDom5,173 netMonDom5,298 netMonDom5,555 netMonDom5,577 netMonDom5,758 netMonDom5,931 netMonDom5,963 netRn6,175 netRn6,300 netRn6,558 netRn6,580 netRn6,761 netRn6,934 netRn6,966 refGene,28 refGene,205 refGene,324 refSeqComposite,5 refSeqComposite,25 refSeqComposite,288 refSeqComposite,294 refSeqComposite,422 refSeqComposite,482 refSeqComposite,839 refSeqComposite,1099 refSeqComposite,1154 refSeqComposite,1163 refSeqComposite,1327 refSeqComposite,1482 refSeqComposite,1510 refSeqComposite,1523 refSeqComposite,1571 refSeqComposite,1592 refSeqComposite,1606 refSeqComposite,1713 rmsk,86 tRNAs,130 transMapEnsemblV5,29 transMapEnsemblV5,157 transMapEnsemblV5,555 transMapEnsemblV5,618 transMapEnsemblV5,683 transMapEstV5,27 transMapEstV5,126 transMapEstV5,524 transMapEstV5,587 transMapEstV5,652 transMapRefSeqV5,27 transMapRefSeqV5,126 transMapRefSeqV5,524 transMapRefSeqV5,587 transMapRefSeqV5,652 transMapRnaV5,27 transMapRnaV5,126 transMapRnaV5,524 transMapRnaV5,587 transMapRnaV5,652 transMapV5,26 transMapV5,111 transMapV5,232 transMapV5,630 transMapV5,693 transMapV5,758 ucscToINSDC,25 ucscToINSDC,37 uniprot,21 uniprot,36 uniprot,115 uniprot,198 uniprot,250 uniprot,557 uniprot,747 uniprot,831 uniprot,890 uniprot,915 uniprot,1507 uniprot,1696 uniprot,1742 uniprot,1772 uniprot,1844 uniprot,1953 uniprot,1962 xenoMrna,5 xenoMrna,24 xenoMrna,520 xenoRefGene,25 xenoRefGene,165 xenoRefGene,284 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 full chainCavPor3,240 chainCavPor3,386 chainHg19,235 chainHg19,379 chainMm10,235 chainMm10,379 chainMm39,235 chainMm39,379 chainMonDom5,235 chainMonDom5,379 chainNetCavPor3,243 chainNetCavPor3,389 chainNetHg19,237 chainNetHg19,381 chainNetMm10,237 chainNetMm10,381 chainNetMm39,238 chainNetMm39,382 chainNetMonDom5,238 chainNetMonDom5,382 chainNetRn6,240 chainNetRn6,385 chainRn6,237 chainRn6,382 nestedRepeats,118 netCavPor3,240 netCavPor3,386 netHg19,235 netHg19,379 netMm10,235 netMm10,379 netMm39,235 netMm39,379 netMonDom5,235 netMonDom5,379 netRn6,237 netRn6,382 rmsk,140 transMapEnsemblV5,52 transMapEnsemblV5,278 transMapEstV5,247 transMapRefSeqV5,247 transMapRnaV5,247 transMapV5,353 uniprot,486 uniprot,528 uniprot,540 full-length refSeqComposite,265 function tRNAs,154 functional HLTOGAannotvHg38v1,162 HLTOGAannotvHg38v1,192 HLTOGAannotvHg38v1,269 HLTOGAannotvHg38v1,292 tRNAs,145 tRNAs,172 tRNAs,221 furthermore augustusGene,64 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 ensGene,175 gc5Base,20 geneid,158 geneid,179 microsat,115 refSeqComposite,900 refSeqComposite,952 refSeqComposite,1076 simpleRepeat,75 tRNAs,477 g-236-318100-330 chainHg19,670 chainNetHg19,672 netHg19,670 g-31-125100-114 chainCavPor3,679 chainMm10,670 chainMm39,670 chainMonDom5,670 chainNetCavPor3,682 chainNetMm10,672 chainNetMm39,673 chainNetMonDom5,673 chainNetRn6,676 chainRn6,673 netCavPor3,679 netMm10,670 netMm39,670 netMonDom5,670 netRn6,673 ga tRNAs,418 galgal6 HLTOGAannotvHg38v1,58 gambiae augustusGene,219 gap blastHg18KG,92 blastHg18KG,96 chainCavPor3,79 chainCavPor3,89 chainCavPor3,190 chainCavPor3,479 chainCavPor3,491 chainCavPor3,514 chainCavPor3,532 chainCavPor3,547 chainCavPor3,564 chainCavPor3,703 chainCavPor3,834 chainHg19,76 chainHg19,86 chainHg19,185 chainHg19,472 chainHg19,484 chainHg19,507 chainHg19,525 chainHg19,540 chainHg19,557 chainHg19,694 chainHg19,825 chainMm10,76 chainMm10,86 chainMm10,185 chainMm10,472 chainMm10,484 chainMm10,507 chainMm10,525 chainMm10,540 chainMm10,557 chainMm10,694 chainMm10,825 chainMm39,76 chainMm39,86 chainMm39,185 chainMm39,472 chainMm39,484 chainMm39,507 chainMm39,525 chainMm39,540 chainMm39,557 chainMm39,694 chainMm39,825 chainMonDom5,76 chainMonDom5,86 chainMonDom5,185 chainMonDom5,472 chainMonDom5,484 chainMonDom5,507 chainMonDom5,525 chainMonDom5,540 chainMonDom5,557 chainMonDom5,694 chainMonDom5,825 chainNetCavPor3,82 chainNetCavPor3,92 chainNetCavPor3,193 chainNetCavPor3,482 chainNetCavPor3,494 chainNetCavPor3,517 chainNetCavPor3,535 chainNetCavPor3,550 chainNetCavPor3,567 chainNetCavPor3,706 chainNetCavPor3,837 chainNetHg19,78 chainNetHg19,88 chainNetHg19,187 chainNetHg19,474 chainNetHg19,486 chainNetHg19,509 chainNetHg19,527 chainNetHg19,542 chainNetHg19,559 chainNetHg19,696 chainNetHg19,827 chainNetMm10,78 chainNetMm10,88 chainNetMm10,187 chainNetMm10,474 chainNetMm10,486 chainNetMm10,509 chainNetMm10,527 chainNetMm10,542 chainNetMm10,559 chainNetMm10,696 chainNetMm10,827 chainNetMm39,79 chainNetMm39,89 chainNetMm39,188 chainNetMm39,475 chainNetMm39,487 chainNetMm39,510 chainNetMm39,528 chainNetMm39,543 chainNetMm39,560 chainNetMm39,697 chainNetMm39,828 chainNetMonDom5,79 chainNetMonDom5,89 chainNetMonDom5,188 chainNetMonDom5,475 chainNetMonDom5,487 chainNetMonDom5,510 chainNetMonDom5,528 chainNetMonDom5,543 chainNetMonDom5,560 chainNetMonDom5,697 chainNetMonDom5,828 chainNetRn6,81 chainNetRn6,91 chainNetRn6,190 chainNetRn6,478 chainNetRn6,490 chainNetRn6,513 chainNetRn6,531 chainNetRn6,546 chainNetRn6,563 chainNetRn6,700 chainNetRn6,831 chainRn6,78 chainRn6,88 chainRn6,187 chainRn6,475 chainRn6,487 chainRn6,510 chainRn6,528 chainRn6,543 chainRn6,560 chainRn6,697 chainRn6,828 est,427 gap,1 gap,2 gap,38 gap,49 gap,62 gap,127 gold,43 intronEst,508 mrna,366 netCavPor3,79 netCavPor3,89 netCavPor3,190 netCavPor3,479 netCavPor3,491 netCavPor3,514 netCavPor3,532 netCavPor3,547 netCavPor3,564 netCavPor3,703 netCavPor3,834 netHg19,76 netHg19,86 netHg19,185 netHg19,472 netHg19,484 netHg19,507 netHg19,525 netHg19,540 netHg19,557 netHg19,694 netHg19,825 netMm10,76 netMm10,86 netMm10,185 netMm10,472 netMm10,484 netMm10,507 netMm10,525 netMm10,540 netMm10,557 netMm10,694 netMm10,825 netMm39,76 netMm39,86 netMm39,185 netMm39,472 netMm39,484 netMm39,507 netMm39,525 netMm39,540 netMm39,557 netMm39,694 netMm39,825 netMonDom5,76 netMonDom5,86 netMonDom5,185 netMonDom5,472 netMonDom5,484 netMonDom5,507 netMonDom5,525 netMonDom5,540 netMonDom5,557 netMonDom5,694 netMonDom5,825 netRn6,78 netRn6,88 netRn6,187 netRn6,475 netRn6,487 netRn6,510 netRn6,528 netRn6,543 netRn6,560 netRn6,697 netRn6,828 refSeqComposite,926 refSeqComposite,959 refSeqComposite,1015 refSeqComposite,1017 transMapEnsemblV5,141 transMapEstV5,110 transMapRefSeqV5,110 transMapRnaV5,110 transMapV5,216 xenoMrna,441 gapless chainCavPor3,646 chainHg19,637 chainMm10,637 chainMm39,637 chainMonDom5,637 chainNetCavPor3,649 chainNetHg19,639 chainNetMm10,639 chainNetMm39,640 chainNetMonDom5,640 chainNetRn6,643 chainRn6,640 netCavPor3,646 netHg19,637 netMm10,637 netMm39,637 netMonDom5,637 netRn6,640 gaps HLTOGAannotvHg38v1,210 chainCavPor3,85 chainCavPor3,96 chainCavPor3,108 chainCavPor3,142 chainCavPor3,167 chainCavPor3,212 chainCavPor3,223 chainCavPor3,406 chainCavPor3,428 chainCavPor3,455 chainCavPor3,889 chainCavPor3,895 chainHg19,82 chainHg19,93 chainHg19,104 chainHg19,138 chainHg19,162 chainHg19,207 chainHg19,218 chainHg19,399 chainHg19,421 chainHg19,448 chainHg19,880 chainHg19,886 chainMm10,82 chainMm10,93 chainMm10,104 chainMm10,138 chainMm10,162 chainMm10,207 chainMm10,218 chainMm10,399 chainMm10,421 chainMm10,448 chainMm10,880 chainMm10,886 chainMm39,82 chainMm39,93 chainMm39,104 chainMm39,138 chainMm39,162 chainMm39,207 chainMm39,218 chainMm39,399 chainMm39,421 chainMm39,448 chainMm39,880 chainMm39,886 chainMonDom5,82 chainMonDom5,93 chainMonDom5,104 chainMonDom5,138 chainMonDom5,162 chainMonDom5,207 chainMonDom5,218 chainMonDom5,399 chainMonDom5,421 chainMonDom5,448 chainMonDom5,880 chainMonDom5,886 chainNetCavPor3,88 chainNetCavPor3,99 chainNetCavPor3,111 chainNetCavPor3,145 chainNetCavPor3,170 chainNetCavPor3,215 chainNetCavPor3,226 chainNetCavPor3,409 chainNetCavPor3,431 chainNetCavPor3,458 chainNetCavPor3,892 chainNetCavPor3,898 chainNetHg19,84 chainNetHg19,95 chainNetHg19,106 chainNetHg19,140 chainNetHg19,164 chainNetHg19,209 chainNetHg19,220 chainNetHg19,401 chainNetHg19,423 chainNetHg19,450 chainNetHg19,882 chainNetHg19,888 chainNetMm10,84 chainNetMm10,95 chainNetMm10,106 chainNetMm10,140 chainNetMm10,164 chainNetMm10,209 chainNetMm10,220 chainNetMm10,401 chainNetMm10,423 chainNetMm10,450 chainNetMm10,882 chainNetMm10,888 chainNetMm39,85 chainNetMm39,96 chainNetMm39,107 chainNetMm39,141 chainNetMm39,165 chainNetMm39,210 chainNetMm39,221 chainNetMm39,402 chainNetMm39,424 chainNetMm39,451 chainNetMm39,883 chainNetMm39,889 chainNetMonDom5,85 chainNetMonDom5,96 chainNetMonDom5,107 chainNetMonDom5,141 chainNetMonDom5,165 chainNetMonDom5,210 chainNetMonDom5,221 chainNetMonDom5,402 chainNetMonDom5,424 chainNetMonDom5,451 chainNetMonDom5,883 chainNetMonDom5,889 chainNetRn6,87 chainNetRn6,98 chainNetRn6,109 chainNetRn6,143 chainNetRn6,167 chainNetRn6,212 chainNetRn6,223 chainNetRn6,405 chainNetRn6,427 chainNetRn6,454 chainNetRn6,886 chainNetRn6,892 chainRn6,84 chainRn6,95 chainRn6,106 chainRn6,140 chainRn6,164 chainRn6,209 chainRn6,220 chainRn6,402 chainRn6,424 chainRn6,451 chainRn6,883 chainRn6,889 gap,11 gap,15 gap,71 gap,73 gap,137 gap,177 gold,85 netCavPor3,85 netCavPor3,96 netCavPor3,108 netCavPor3,142 netCavPor3,167 netCavPor3,212 netCavPor3,223 netCavPor3,406 netCavPor3,428 netCavPor3,455 netCavPor3,889 netCavPor3,895 netHg19,82 netHg19,93 netHg19,104 netHg19,138 netHg19,162 netHg19,207 netHg19,218 netHg19,399 netHg19,421 netHg19,448 netHg19,880 netHg19,886 netMm10,82 netMm10,93 netMm10,104 netMm10,138 netMm10,162 netMm10,207 netMm10,218 netMm10,399 netMm10,421 netMm10,448 netMm10,880 netMm10,886 netMm39,82 netMm39,93 netMm39,104 netMm39,138 netMm39,162 netMm39,207 netMm39,218 netMm39,399 netMm39,421 netMm39,448 netMm39,880 netMm39,886 netMonDom5,82 netMonDom5,93 netMonDom5,104 netMonDom5,138 netMonDom5,162 netMonDom5,207 netMonDom5,218 netMonDom5,399 netMonDom5,421 netMonDom5,448 netMonDom5,880 netMonDom5,886 netRn6,84 netRn6,95 netRn6,106 netRn6,140 netRn6,164 netRn6,209 netRn6,220 netRn6,402 netRn6,424 netRn6,451 netRn6,883 netRn6,889 refSeqComposite,929 refSeqComposite,1020 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gasteiger uniprot,2020 gattiker uniprot,2016 gbdb refSeqComposite,1548 transMapEnsemblV5,661 transMapEstV5,630 transMapRefSeqV5,630 transMapRnaV5,630 transMapV5,736 uniprot,1815 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5Base,1 gc5Base,3 gc5Base,13 gc5Base,30 gen geneid,41 genbank est,22 est,646 est,757 est,781 intronEst,24 intronEst,727 intronEst,841 intronEst,865 mrna,6 mrna,20 mrna,384 mrna,474 mrna,498 transMapEnsemblV5,171 transMapEnsemblV5,174 transMapEstV5,16 transMapEstV5,140 transMapEstV5,143 transMapRefSeqV5,140 transMapRefSeqV5,143 transMapRnaV5,4 transMapRnaV5,17 transMapRnaV5,140 transMapRnaV5,143 transMapV5,246 transMapV5,249 uniprot,376 xenoMrna,6 xenoMrna,23 xenoMrna,549 xenoMrna,573 gencode transMapEnsemblV5,6 transMapEnsemblV5,18 transMapEnsemblV5,38 transMapEnsemblV5,707 transMapEstV5,676 transMapRefSeqV5,676 transMapRnaV5,676 transMapV5,782 uniprot,730 gene HLTOGAannotvHg38v1,13 HLTOGAannotvHg38v1,30 HLTOGAannotvHg38v1,47 HLTOGAannotvHg38v1,357 augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 blastHg18KG,11 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 ensGene,7 ensGene,11 ensGene,23 ensGene,39 ensGene,58 ensGene,155 geneid,4 geneid,8 geneid,14 geneid,128 genscan,4 genscan,8 genscan,55 genscan,72 genscan,111 genscan,117 genscan,214 ncbiRefSeq,17 ncbiRefSeqCurated,15 ncbiRefSeqGenomicDiff,14 ncbiRefSeqOther,17 ncbiRefSeqPredicted,13 ncbiRefSeqPsl,9 refGene,13 refGene,49 refGene,75 refGene,92 refGene,146 refGene,161 refGene,166 refGene,194 refGene,223 refSeqComposite,9 refSeqComposite,108 refSeqComposite,134 refSeqComposite,410 refSeqComposite,540 refSeqComposite,558 refSeqComposite,599 refSeqComposite,767 refSeqComposite,785 refSeqComposite,797 refSeqComposite,828 refSeqComposite,857 tRNAs,11 tRNAs,141 transMapEnsemblV5,12 transMapEnsemblV5,53 transMapEnsemblV5,59 transMapEnsemblV5,390 transMapEnsemblV5,773 transMapEstV5,10 transMapEstV5,359 transMapEstV5,742 transMapRefSeqV5,5 transMapRefSeqV5,11 transMapRefSeqV5,18 transMapRefSeqV5,359 transMapRefSeqV5,742 transMapRnaV5,11 transMapRnaV5,359 transMapRnaV5,742 transMapV5,9 transMapV5,17 transMapV5,465 transMapV5,848 unipAliSwissprot,20 unipAliTrembl,12 unipChain,10 unipConflict,8 unipDisulfBond,8 unipDomain,6 unipInterest,8 unipLocCytopl,7 unipLocExtra,7 unipLocSignal,8 unipLocTransMemb,7 unipModif,9 unipMut,8 unipOther,8 unipRepeat,6 unipStruct,10 uniprot,9 uniprot,732 uniprot,1025 uniprot,1050 uniprot,1059 uniprot,1080 uniprot,1281 uniprot,1394 xenoRefGene,8 xenoRefGene,52 xenoRefGene,106 xenoRefGene,121 xenoRefGene,126 xenoRefGene,154 xenoRefGene,183 gene-inactivating HLTOGAannotvHg38v1,156 gene-rich gc5Base,36 genedx uniprot,1973 geneid geneid,1 geneid,3 geneid,18 geneid,50 geneid,163 geneid,185 genepred ensGene,76 refSeqComposite,1173 refSeqComposite,1402 refSeqComposite,1577 genepredtogtf refSeqComposite,1589 refSeqComposite,1612 refSeqComposite,1619 general est,529 gap,146 intronEst,610 generally rmsk,72 uniprot,248 generate est,640 intronEst,721 nestedRepeats,261 nestedRepeats,320 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 ensGene,14 nestedRepeats,282 refGene,328 refSeqComposite,481 refSeqComposite,1199 refSeqComposite,1715 rmsk,289 xenoRefGene,288 generating augustusGene,189 genes HLTOGAannotvHg38v1,11 HLTOGAannotvHg38v1,36 HLTOGAannotvHg38v1,101 augustusGene,8 augustusGene,44 blastHg18KG,9 blastHg18KG,27 blastHg18KG,33 blastHg18KG,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 ensGene,2 ensGene,4 ensGene,5 ensGene,27 ensGene,92 est,42 geneid,2 geneid,6 geneid,56 geneid,166 genscan,2 genscan,6 genscan,59 intronEst,54 ncbiRefSeq,5 ncbiRefSeq,15 ncbiRefSeqCurated,5 ncbiRefSeqCurated,13 ncbiRefSeqGenomicDiff,12 ncbiRefSeqOther,15 ncbiRefSeqPredicted,5 ncbiRefSeqPredicted,11 ncbiRefSeqPsl,7 refGene,11 refGene,18 refGene,26 refGene,79 refGene,232 refGene,240 refGene,251 refSeqComposite,4 refSeqComposite,7 refSeqComposite,15 refSeqComposite,23 refSeqComposite,138 refSeqComposite,237 refSeqComposite,431 refSeqComposite,506 refSeqComposite,1211 refSeqComposite,1222 simpleRepeat,41 tRNAs,2 tRNAs,5 tRNAs,9 tRNAs,18 tRNAs,174 tRNAs,244 tRNAs,286 tRNAs,304 tRNAs,376 tRNAs,424 tRNAs,453 tRNAs,485 transMapEnsemblV5,10 transMapEnsemblV5,88 transMapEnsemblV5,170 transMapEnsemblV5,184 transMapEnsemblV5,290 transMapEnsemblV5,803 transMapEstV5,8 transMapEstV5,57 transMapEstV5,139 transMapEstV5,153 transMapEstV5,259 transMapEstV5,772 transMapRefSeqV5,9 transMapRefSeqV5,57 transMapRefSeqV5,139 transMapRefSeqV5,153 transMapRefSeqV5,259 transMapRefSeqV5,772 transMapRnaV5,9 transMapRnaV5,57 transMapRnaV5,139 transMapRnaV5,153 transMapRnaV5,259 transMapRnaV5,772 transMapV5,7 transMapV5,58 transMapV5,72 transMapV5,245 transMapV5,259 transMapV5,365 transMapV5,878 unipAliSwissprot,18 unipAliTrembl,10 unipChain,8 unipConflict,6 unipDisulfBond,6 unipDomain,4 unipInterest,6 unipLocCytopl,5 unipLocExtra,5 unipLocSignal,6 unipLocTransMemb,5 unipModif,7 unipMut,6 unipOther,6 unipRepeat,4 unipStruct,8 uniprot,7 uniprot,1300 xenoRefGene,5 xenoRefGene,6 xenoRefGene,18 xenoRefGene,192 xenoRefGene,200 xenoRefGene,211 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 genome HLTOGAannotvHg38v1,22 HLTOGAannotvHg38v1,64 HLTOGAannotvHg38v1,71 augustusGene,31 blastHg18KG,51 chainCavPor3,21 chainCavPor3,76 chainCavPor3,207 chainCavPor3,281 chainCavPor3,294 chainCavPor3,788 chainCavPor3,1109 chainHg19,19 chainHg19,73 chainHg19,202 chainHg19,275 chainHg19,288 chainHg19,779 chainHg19,1100 chainMm10,19 chainMm10,73 chainMm10,202 chainMm10,275 chainMm10,288 chainMm10,779 chainMm10,1100 chainMm39,19 chainMm39,73 chainMm39,202 chainMm39,275 chainMm39,288 chainMm39,779 chainMm39,1100 chainMonDom5,19 chainMonDom5,73 chainMonDom5,202 chainMonDom5,275 chainMonDom5,288 chainMonDom5,779 chainMonDom5,1100 chainNetCavPor3,24 chainNetCavPor3,79 chainNetCavPor3,210 chainNetCavPor3,284 chainNetCavPor3,297 chainNetCavPor3,791 chainNetCavPor3,1112 chainNetHg19,21 chainNetHg19,75 chainNetHg19,204 chainNetHg19,277 chainNetHg19,290 chainNetHg19,781 chainNetHg19,1102 chainNetMm10,21 chainNetMm10,75 chainNetMm10,204 chainNetMm10,277 chainNetMm10,290 chainNetMm10,781 chainNetMm10,1102 chainNetMm39,22 chainNetMm39,76 chainNetMm39,205 chainNetMm39,278 chainNetMm39,291 chainNetMm39,782 chainNetMm39,1103 chainNetMonDom5,22 chainNetMonDom5,76 chainNetMonDom5,205 chainNetMonDom5,278 chainNetMonDom5,291 chainNetMonDom5,782 chainNetMonDom5,1103 chainNetRn6,23 chainNetRn6,78 chainNetRn6,207 chainNetRn6,280 chainNetRn6,293 chainNetRn6,785 chainNetRn6,1106 chainRn6,20 chainRn6,75 chainRn6,204 chainRn6,277 chainRn6,290 chainRn6,782 chainRn6,1103 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ctgPos2,13 ctgPos2,26 ensGene,164 ensGene,192 est,25 est,651 est,804 gap,77 gap,120 geneid,188 gold,18 gold,138 intronEst,27 intronEst,37 intronEst,732 intronEst,888 mrna,23 mrna,391 mrna,521 ncbiRefSeqGenomicDiff,11 nestedRepeats,405 netCavPor3,21 netCavPor3,76 netCavPor3,207 netCavPor3,281 netCavPor3,294 netCavPor3,788 netCavPor3,1109 netHg19,19 netHg19,73 netHg19,202 netHg19,275 netHg19,288 netHg19,779 netHg19,1100 netMm10,19 netMm10,73 netMm10,202 netMm10,275 netMm10,288 netMm10,779 netMm10,1100 netMm39,19 netMm39,73 netMm39,202 netMm39,275 netMm39,288 netMm39,779 netMm39,1100 netMonDom5,19 netMonDom5,73 netMonDom5,202 netMonDom5,275 netMonDom5,288 netMonDom5,779 netMonDom5,1100 netRn6,20 netRn6,75 netRn6,204 netRn6,277 netRn6,290 netRn6,782 netRn6,1103 refGene,263 refGene,347 refSeqComposite,56 refSeqComposite,290 refSeqComposite,298 refSeqComposite,307 refSeqComposite,325 refSeqComposite,369 refSeqComposite,442 refSeqComposite,464 refSeqComposite,496 refSeqComposite,877 refSeqComposite,924 refSeqComposite,974 refSeqComposite,1060 refSeqComposite,1073 refSeqComposite,1107 refSeqComposite,1120 refSeqComposite,1182 refSeqComposite,1231 refSeqComposite,1445 refSeqComposite,1734 rmsk,428 transMapEnsemblV5,36 transMapEnsemblV5,163 transMapEnsemblV5,180 transMapEnsemblV5,204 transMapEnsemblV5,333 transMapEnsemblV5,344 transMapEnsemblV5,405 transMapEnsemblV5,415 transMapEnsemblV5,449 transMapEnsemblV5,472 transMapEnsemblV5,605 transMapEnsemblV5,743 transMapEstV5,34 transMapEstV5,132 transMapEstV5,149 transMapEstV5,173 transMapEstV5,302 transMapEstV5,313 transMapEstV5,374 transMapEstV5,384 transMapEstV5,418 transMapEstV5,441 transMapEstV5,574 transMapEstV5,712 transMapRefSeqV5,34 transMapRefSeqV5,132 transMapRefSeqV5,149 transMapRefSeqV5,173 transMapRefSeqV5,302 transMapRefSeqV5,313 transMapRefSeqV5,374 transMapRefSeqV5,384 transMapRefSeqV5,418 transMapRefSeqV5,441 transMapRefSeqV5,574 transMapRefSeqV5,712 transMapRnaV5,34 transMapRnaV5,132 transMapRnaV5,149 transMapRnaV5,173 transMapRnaV5,302 transMapRnaV5,313 transMapRnaV5,374 transMapRnaV5,384 transMapRnaV5,418 transMapRnaV5,441 transMapRnaV5,574 transMapRnaV5,712 transMapV5,33 transMapV5,84 transMapV5,238 transMapV5,255 transMapV5,279 transMapV5,408 transMapV5,419 transMapV5,480 transMapV5,490 transMapV5,524 transMapV5,547 transMapV5,680 transMapV5,818 ucscToINSDC,18 unipAliSwissprot,9 unipAliTrembl,9 uniprot,88 uniprot,103 uniprot,120 uniprot,203 uniprot,216 uniprot,609 uniprot,642 uniprot,717 uniprot,749 uniprot,803 uniprot,811 uniprot,910 uniprot,1141 uniprot,1377 uniprot,1494 uniprot,1520 uniprot,1543 uniprot,1730 uniprot,1847 uniprot,1858 uniprot,1891 xenoMrna,466 xenoMrna,596 xenoRefGene,223 xenoRefGene,306 genome-wide refSeqComposite,1497 genome.bed uniprot,1935 uniprot,1937 genomes chainCavPor3,27 chainCavPor3,590 chainCavPor3,1071 chainHg19,25 chainHg19,582 chainHg19,1062 chainMm10,25 chainMm10,582 chainMm10,1062 chainMm39,25 chainMm39,582 chainMm39,1062 chainMonDom5,25 chainMonDom5,582 chainMonDom5,1062 chainNetCavPor3,30 chainNetCavPor3,593 chainNetCavPor3,1074 chainNetHg19,27 chainNetHg19,584 chainNetHg19,1064 chainNetMm10,27 chainNetMm10,584 chainNetMm10,1064 chainNetMm39,28 chainNetMm39,585 chainNetMm39,1065 chainNetMonDom5,28 chainNetMonDom5,585 chainNetMonDom5,1065 chainNetRn6,29 chainNetRn6,588 chainNetRn6,1068 chainRn6,26 chainRn6,585 chainRn6,1065 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netCavPor3,27 netCavPor3,590 netCavPor3,1071 netHg19,25 netHg19,582 netHg19,1062 netMm10,25 netMm10,582 netMm10,1062 netMm39,25 netMm39,582 netMm39,1062 netMonDom5,25 netMonDom5,582 netMonDom5,1062 netRn6,26 netRn6,585 netRn6,1065 refGene,416 refSeqComposite,569 refSeqComposite,1803 rmsk,392 rmsk,406 transMapEnsemblV5,361 transMapEnsemblV5,369 transMapEstV5,330 transMapEstV5,338 transMapRefSeqV5,330 transMapRefSeqV5,338 transMapRnaV5,330 transMapRnaV5,338 transMapV5,436 transMapV5,444 uniprot,863 uniprot,941 xenoRefGene,375 genomic HLTOGAannotvHg38v1,122 chainCavPor3,498 chainCavPor3,1023 chainCavPor3,1039 chainHg19,491 chainHg19,1014 chainHg19,1030 chainMm10,491 chainMm10,1014 chainMm10,1030 chainMm39,491 chainMm39,1014 chainMm39,1030 chainMonDom5,491 chainMonDom5,1014 chainMonDom5,1030 chainNetCavPor3,501 chainNetCavPor3,1026 chainNetCavPor3,1042 chainNetHg19,493 chainNetHg19,1016 chainNetHg19,1032 chainNetMm10,493 chainNetMm10,1016 chainNetMm10,1032 chainNetMm39,494 chainNetMm39,1017 chainNetMm39,1033 chainNetMonDom5,494 chainNetMonDom5,1017 chainNetMonDom5,1033 chainNetRn6,497 chainNetRn6,1020 chainNetRn6,1036 chainRn6,494 chainRn6,1017 chainRn6,1033 est,88 est,406 est,607 est,717 geneid,59 genscan,92 genscan,218 intronEst,72 intronEst,169 intronEst,487 intronEst,688 intronEst,798 mrna,343 mrna,433 netCavPor3,498 netCavPor3,1023 netCavPor3,1039 netHg19,491 netHg19,1014 netHg19,1030 netMm10,491 netMm10,1014 netMm10,1030 netMm39,491 netMm39,1014 netMm39,1030 netMonDom5,491 netMonDom5,1014 netMonDom5,1030 netRn6,494 netRn6,1017 netRn6,1033 refGene,202 refGene,313 refSeqComposite,836 refSeqComposite,904 refSeqComposite,928 refSeqComposite,1019 refSeqComposite,1077 refSeqComposite,1281 tRNAs,108 tRNAs,379 tRNAs,426 tRNAs,455 tRNAs,487 transMapEnsemblV5,127 transMapEstV5,96 transMapRefSeqV5,96 transMapRnaV5,96 transMapV5,202 uniprot,28 uniprot,450 xenoMrna,100 xenoMrna,418 xenoMrna,508 xenoRefGene,162 xenoRefGene,273 genomics chainCavPor3,13 chainHg19,11 chainMm10,11 chainMm39,11 chainMonDom5,11 chainNetCavPor3,16 chainNetCavPor3Viewchain,13 chainNetCavPor3Viewnet,13 chainNetHg19,13 chainNetHg19Viewchain,12 chainNetHg19Viewnet,12 chainNetMm10,13 chainNetMm10Viewchain,12 chainNetMm10Viewnet,12 chainNetMm39,14 chainNetMm39Viewchain,12 chainNetMm39Viewnet,12 chainNetMonDom5,14 chainNetMonDom5Viewchain,12 chainNetMonDom5Viewnet,12 chainNetRn6,15 chainNetRn6Viewchain,13 chainNetRn6Viewnet,13 chainRn6,12 netCavPor3,13 netHg19,11 netMm10,11 netMm39,11 netMonDom5,11 netRn6,12 transMapEnsemblV5,742 transMapEnsemblV5,797 transMapEstV5,711 transMapEstV5,766 transMapRefSeqV5,711 transMapRefSeqV5,766 transMapRnaV5,711 transMapRnaV5,766 transMapV5,817 transMapV5,872 genscan genscan,1 genscan,3 genscan,17 genscan,136 genscan,177 genuine intronEst,111 gff refSeqComposite,1166 gigabases tRNAs,96 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 gish blastHg18KG,155 github uniprot,1559 github.com HLTOGAannotvHg38v1,331 give transMapEnsemblV5,437 transMapEstV5,406 transMapRefSeqV5,406 transMapRnaV5,406 transMapV5,512 xenoMrna,110 given refSeqComposite,1537 transMapEnsemblV5,481 transMapEnsemblV5,654 transMapEstV5,450 transMapEstV5,623 transMapRefSeqV5,450 transMapRefSeqV5,623 transMapRnaV5,450 transMapRnaV5,623 transMapV5,556 transMapV5,729 uniprot,741 uniprot,1235 uniprot,1240 uniprot,1808 global transMapEnsemblV5,354 transMapEstV5,323 transMapRefSeqV5,323 transMapRnaV5,323 transMapV5,429 glyco uniprot,469 glycosylation uniprot,341 uniprot,584 gnomon refSeqComposite,374 go est,414 est,435 genscan,113 intronEst,495 intronEst,516 mrna,351 mrna,374 refGene,219 refSeqComposite,853 uniprot,1412 xenoMrna,426 xenoMrna,449 xenoRefGene,179 gold gold,80 gold,94 goldenpath uniprot,1907 gr refGene,361 refSeqComposite,1748 xenoRefGene,320 graph gc5Base,59 gc5Base,78 quality,73 graphical chainCavPor3,445 chainHg19,438 chainMm10,438 chainMm39,438 chainMonDom5,438 chainNetCavPor3,448 chainNetHg19,440 chainNetMm10,440 chainNetMm39,441 chainNetMonDom5,441 chainNetRn6,444 chainRn6,441 gold,119 netCavPor3,445 netHg19,438 netMm10,438 netMm39,438 netMonDom5,438 netRn6,441 quality,100 rmsk,211 grch37 chainHg19,6 chainHg19,68 chainHg19,302 chainNetHg19,6 chainNetHg19,70 chainNetHg19,304 chainNetHg19Viewchain,5 chainNetHg19Viewnet,5 netHg19,6 netHg19,68 netHg19,302 grcm38 chainMm10,6 chainMm10,68 chainMm10,302 chainNetMm10,6 chainNetMm10,70 chainNetMm10,304 chainNetMm10Viewchain,5 chainNetMm10Viewnet,5 netMm10,6 netMm10,68 netMm10,302 grcm39 chainMm39,6 chainMm39,68 chainMm39,302 chainNetMm39,7 chainNetMm39,71 chainNetMm39,305 chainNetMm39Viewchain,5 chainNetMm39Viewnet,5 netMm39,6 netMm39,68 netMm39,302 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 uniprot,588 uniprot,593 grey tRNAs,206 group augustusGene,198 augustusGene,235 chainCavPor3,638 chainHg19,629 chainMm10,629 chainMm39,629 chainMonDom5,629 chainNetCavPor3,641 chainNetHg19,631 chainNetMm10,631 chainNetMm39,632 chainNetMonDom5,632 chainNetRn6,635 chainRn6,632 geneid,31 netCavPor3,638 netHg19,629 netMm10,629 netMm39,629 netMonDom5,629 netRn6,632 refSeqComposite,387 refSeqComposite,447 uniprot,430 grouped gold,30 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 intronEst,88 tRNAs,165 uniprot,907 uniprot,909 uniprot,1930 gtf ensGene,96 refSeqComposite,1563 refSeqComposite,1573 refSeqComposite,1585 gtrnadb tRNAs,111 tRNAs,332 tRNAs,370 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5Base,21 guess tRNAs,256 guides tRNAs,261 guig geneid,23 geneid,159 geneid,182 guinea chainCavPor3,1 chainCavPor3,4 chainCavPor3,67 chainCavPor3,99 chainCavPor3,152 chainCavPor3,271 chainCavPor3,297 chainCavPor3,579 chainCavPor3,628 chainNetCavPor3,1 chainNetCavPor3,5 chainNetCavPor3,70 chainNetCavPor3,102 chainNetCavPor3,155 chainNetCavPor3,274 chainNetCavPor3,300 chainNetCavPor3,582 chainNetCavPor3,631 chainNetCavPor3Viewchain,2 chainNetCavPor3Viewnet,2 netCavPor3,1 netCavPor3,4 netCavPor3,67 netCavPor3,99 netCavPor3,152 netCavPor3,271 netCavPor3,297 netCavPor3,579 netCavPor3,628 h uniprot,2013 had transMapEnsemblV5,194 transMapEstV5,163 transMapRefSeqV5,163 transMapRnaV5,163 transMapV5,269 haeussler uniprot,1945 handful uniprot,1180 haplotype uniprot,852 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainCavPor3,942 chainCavPor3,1099 chainHg19,933 chainHg19,1090 chainMm10,933 chainMm10,1090 chainMm39,933 chainMm39,1090 chainMonDom5,933 chainMonDom5,1090 chainNetCavPor3,945 chainNetCavPor3,1102 chainNetHg19,935 chainNetHg19,1092 chainNetMm10,935 chainNetMm10,1092 chainNetMm39,936 chainNetMm39,1093 chainNetMonDom5,936 chainNetMonDom5,1093 chainNetRn6,939 chainNetRn6,1096 chainRn6,936 chainRn6,1093 netCavPor3,942 netCavPor3,1099 netHg19,933 netHg19,1090 netMm10,933 netMm10,1090 netMm39,933 netMm39,1090 netMonDom5,933 netMonDom5,1090 netRn6,936 netRn6,1093 harris chainCavPor3,1016 chainHg19,1007 chainMm10,1007 chainMm39,1007 chainMonDom5,1007 chainNetCavPor3,1019 chainNetHg19,1009 chainNetMm10,1009 chainNetMm39,1010 chainNetMonDom5,1010 chainNetRn6,1013 chainRn6,1010 netCavPor3,1016 netHg19,1007 netMm10,1007 netMm39,1007 netMonDom5,1007 netRn6,1010 hart refGene,372 refSeqComposite,1759 xenoRefGene,331 has ctgPos2,27 est,114 intronEst,195 mrna,60 nestedRepeats,246 refGene,106 refSeqComposite,613 refSeqComposite,634 refSeqComposite,670 refSeqComposite,682 refSeqComposite,695 refSeqComposite,814 transMapV5,145 uniprot,33 uniprot,46 uniprot,154 uniprot,606 uniprot,1195 uniprot,1232 uniprot,1381 xenoMrna,135 xenoRefGene,66 haussler augustusGene,292 chainCavPor3,977 chainCavPor3,1057 chainCavPor3,1101 chainHg19,968 chainHg19,1048 chainHg19,1092 chainMm10,968 chainMm10,1048 chainMm10,1092 chainMm39,968 chainMm39,1048 chainMm39,1092 chainMonDom5,968 chainMonDom5,1048 chainMonDom5,1092 chainNetCavPor3,980 chainNetCavPor3,1060 chainNetCavPor3,1104 chainNetHg19,970 chainNetHg19,1050 chainNetHg19,1094 chainNetMm10,970 chainNetMm10,1050 chainNetMm10,1094 chainNetMm39,971 chainNetMm39,1051 chainNetMm39,1095 chainNetMonDom5,971 chainNetMonDom5,1051 chainNetMonDom5,1095 chainNetRn6,974 chainNetRn6,1054 chainNetRn6,1098 chainRn6,971 chainRn6,1051 chainRn6,1095 netCavPor3,977 netCavPor3,1057 netCavPor3,1101 netHg19,968 netHg19,1048 netHg19,1092 netMm10,968 netMm10,1048 netMm10,1092 netMm39,968 netMm39,1048 netMm39,1092 netMonDom5,968 netMonDom5,1048 netMonDom5,1092 netRn6,971 netRn6,1051 netRn6,1095 transMapEnsemblV5,760 transMapEnsemblV5,794 transMapEstV5,729 transMapEstV5,763 transMapRefSeqV5,729 transMapRefSeqV5,763 transMapRnaV5,729 transMapRnaV5,763 transMapV5,835 transMapV5,869 have chainCavPor3,574 chainHg19,567 chainMm10,567 chainMm39,567 chainMonDom5,567 chainNetCavPor3,577 chainNetHg19,569 chainNetMm10,569 chainNetMm39,570 chainNetMonDom5,570 chainNetRn6,573 chainRn6,570 intronEst,6 intronEst,87 nestedRepeats,88 netCavPor3,574 netHg19,567 netMm10,567 netMm39,567 netMonDom5,567 netRn6,570 rmsk,69 rmsk,108 tRNAs,181 tRNAs,214 uniprot,170 uniprot,302 uniprot,942 uniprot,1000 uniprot,1042 uniprot,1444 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 est,690 est,699 intronEst,771 intronEst,780 mrna,406 mrna,415 refGene,286 refGene,295 refSeqComposite,1254 refSeqComposite,1263 xenoMrna,480 xenoMrna,490 xenoRefGene,246 xenoRefGene,255 heavily uniprot,1533 height quality,27 heights quality,48 helices uniprot,366 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 ensGene,126 gc5Base,61 quality,75 refGene,65 refSeqComposite,124 helpful est,142 intronEst,223 mrna,88 xenoMrna,163 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 hence xenoMrna,89 here refSeqComposite,990 refSeqComposite,1193 refSeqComposite,1464 refSeqComposite,1486 refSeqComposite,1680 rmsk,127 transMapEnsemblV5,136 transMapEnsemblV5,150 transMapEnsemblV5,641 transMapEstV5,105 transMapEstV5,119 transMapEstV5,610 transMapRefSeqV5,105 transMapRefSeqV5,119 transMapRefSeqV5,610 transMapRnaV5,105 transMapRnaV5,119 transMapRnaV5,610 transMapV5,211 transMapV5,225 transMapV5,716 uniprot,1795 xenoMrna,84 hg.conf refSeqComposite,1635 hg18 blastHg18KG,31 hg19 chainHg19,7 chainHg19,69 chainHg19,303 chainNetHg19,1 chainNetHg19,7 chainNetHg19,71 chainNetHg19,305 chainNetHg19Viewchain,6 chainNetHg19Viewnet,6 netHg19,7 netHg19,69 netHg19,303 refSeqComposite,570 uniprot,847 uniprot,860 hg38 HLTOGAannotvHg38v1,3 HLTOGAannotvHg38v1,8 HLTOGAannotvHg38v1,54 refSeqComposite,514 refSeqComposite,572 uniprot,700 uniprot,843 uniprot,1177 uniprot,1367 uniprot,1909 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 refSeqComposite,1547 transMapEnsemblV5,660 transMapEstV5,629 transMapRefSeqV5,629 transMapRnaV5,629 transMapV5,735 uniprot,1814 uniprot,1906 uniprot,1916 hgmd refSeqComposite,546 hgvs refSeqComposite,899 refSeqComposite,912 refSeqComposite,951 refSeqComposite,980 refSeqComposite,1039 refSeqComposite,1066 refSeqComposite,1070 refSeqComposite,1090 hiatt refGene,362 refSeqComposite,1749 xenoRefGene,321 hidden augustusGene,324 uniprot,182 uniprot,223 hide refGene,230 refSeqComposite,174 uniprot,659 uniprot,667 xenoRefGene,190 hierarchical geneid,64 hierarchy chainCavPor3,825 chainHg19,816 chainMm10,816 chainMm39,816 chainMonDom5,816 chainNetCavPor3,828 chainNetHg19,818 chainNetMm10,818 chainNetMm39,819 chainNetMonDom5,819 chainNetRn6,822 chainRn6,819 netCavPor3,825 netHg19,816 netMm10,816 netMm39,816 netMonDom5,816 netRn6,819 high gc5Base,29 transMapV5,118 higher chainCavPor3,857 chainHg19,848 chainMm10,848 chainMm39,848 chainMonDom5,848 chainNetCavPor3,860 chainNetHg19,850 chainNetMm10,850 chainNetMm39,851 chainNetMonDom5,851 chainNetRn6,854 chainRn6,851 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netCavPor3,857 netHg19,848 netMm10,848 netMm39,848 netMonDom5,848 netRn6,851 rmsk,230 transMapV5,146 higher-level chainCavPor3,874 chainHg19,865 chainMm10,865 chainMm39,865 chainMonDom5,865 chainNetCavPor3,877 chainNetHg19,867 chainNetMm10,867 chainNetMm39,868 chainNetMonDom5,868 chainNetRn6,871 chainRn6,868 netCavPor3,874 netHg19,865 netMm10,865 netMm39,865 netMonDom5,865 netRn6,868 higher-scoring chainCavPor3,818 chainCavPor3,837 chainHg19,809 chainHg19,828 chainMm10,809 chainMm10,828 chainMm39,809 chainMm39,828 chainMonDom5,809 chainMonDom5,828 chainNetCavPor3,821 chainNetCavPor3,840 chainNetHg19,811 chainNetHg19,830 chainNetMm10,811 chainNetMm10,830 chainNetMm39,812 chainNetMm39,831 chainNetMonDom5,812 chainNetMonDom5,831 chainNetRn6,815 chainNetRn6,834 chainRn6,812 chainRn6,831 netCavPor3,818 netCavPor3,837 netHg19,809 netHg19,828 netMm10,809 netMm10,828 netMm39,809 netMm39,828 netMonDom5,809 netMonDom5,828 netRn6,812 netRn6,831 highest est,692 intronEst,773 mrna,408 refGene,288 refSeqComposite,1256 uniprot,948 uniprot,1113 xenoMrna,482 xenoRefGene,248 highest-scoring chainCavPor3,397 chainCavPor3,784 chainHg19,390 chainHg19,775 chainMm10,390 chainMm10,775 chainMm39,390 chainMm39,775 chainMonDom5,390 chainMonDom5,775 chainNetCavPor3,400 chainNetCavPor3,787 chainNetHg19,392 chainNetHg19,777 chainNetMm10,392 chainNetMm10,777 chainNetMm39,393 chainNetMm39,778 chainNetMonDom5,393 chainNetMonDom5,778 chainNetRn6,396 chainNetRn6,781 chainRn6,393 chainRn6,778 netCavPor3,397 netCavPor3,784 netHg19,390 netHg19,775 netMm10,390 netMm10,775 netMm39,390 netMm39,775 netMonDom5,390 netMonDom5,775 netRn6,393 netRn6,778 highlight est,333 gc5Base,49 intronEst,414 mrna,279 quality,64 xenoMrna,354 highlighted est,303 est,321 intronEst,384 intronEst,402 mrna,249 mrna,267 uniprot,580 xenoMrna,324 xenoMrna,342 highly microsat,40 tRNAs,69 hilgers HLTOGAannotvHg38v1,352 hiller HLTOGAannotvHg38v1,322 hillerlab HLTOGAannotvHg38v1,332 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainCavPor3,1053 chainHg19,1044 chainMm10,1044 chainMm39,1044 chainMonDom5,1044 chainNetCavPor3,1056 chainNetHg19,1046 chainNetMm10,1046 chainNetMm39,1047 chainNetMonDom5,1047 chainNetRn6,1050 chainRn6,1047 netCavPor3,1053 netHg19,1044 netMm10,1044 netMm39,1044 netMonDom5,1044 netRn6,1047 hiram gc5Base,82 quality,106 ucscToINSDC,51 his chainCavPor3,951 chainHg19,942 chainMm10,942 chainMm39,942 chainMonDom5,942 chainNetCavPor3,954 chainNetHg19,944 chainNetMm10,944 chainNetMm39,945 chainNetMonDom5,945 chainNetRn6,948 chainRn6,945 netCavPor3,951 netHg19,942 netMm10,942 netMm39,942 netMonDom5,942 netRn6,945 homology-based HLTOGAannotvHg38v1,26 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 hou chainCavPor3,930 chainHg19,921 chainMm10,921 chainMm39,921 chainMonDom5,921 chainNetCavPor3,933 chainNetHg19,923 chainNetMm10,923 chainNetMm39,924 chainNetMonDom5,924 chainNetRn6,927 chainRn6,924 netCavPor3,930 netHg19,921 netMm10,921 netMm39,921 netMonDom5,921 netRn6,924 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainCavPor3,885 chainCavPor3,902 chainHg19,876 chainHg19,893 chainMm10,876 chainMm10,893 chainMm39,876 chainMm39,893 chainMonDom5,876 chainMonDom5,893 chainNetCavPor3,888 chainNetCavPor3,905 chainNetHg19,878 chainNetHg19,895 chainNetMm10,878 chainNetMm10,895 chainNetMm39,879 chainNetMm39,896 chainNetMonDom5,879 chainNetMonDom5,896 chainNetRn6,882 chainNetRn6,899 chainRn6,879 chainRn6,896 netCavPor3,885 netCavPor3,902 netHg19,876 netHg19,893 netMm10,876 netMm10,893 netMm39,876 netMm39,893 netMonDom5,876 netMonDom5,893 netRn6,879 netRn6,896 refSeqComposite,96 rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 transMapEnsemblV5,485 transMapEstV5,454 transMapRefSeqV5,454 transMapRnaV5,454 transMapV5,560 hox refSeqComposite,414 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 refSeqComposite,1546 rmsk,355 transMapEnsemblV5,659 transMapEstV5,628 transMapRefSeqV5,628 transMapRnaV5,628 transMapV5,734 uniprot,1813 https uniprot,1905 uniprot,1915 hub uniprot,711 uniprot,1672 uniprot,1679 hubbard ensGene,44 ensGene,168 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 hum uniprot,2043 human HLTOGAannotvHg38v1,7 HLTOGAannotvHg38v1,53 augustusGene,205 augustusGene,210 augustusGene,276 blastHg18KG,1 blastHg18KG,3 blastHg18KG,42 blastHg18KG,50 chainCavPor3,1070 chainHg19,1 chainHg19,3 chainHg19,65 chainHg19,96 chainHg19,148 chainHg19,266 chainHg19,291 chainHg19,572 chainHg19,620 chainHg19,1061 chainMm10,1061 chainMm39,1061 chainMonDom5,1061 chainNetCavPor3,1073 chainNetHg19,3 chainNetHg19,67 chainNetHg19,98 chainNetHg19,150 chainNetHg19,268 chainNetHg19,293 chainNetHg19,574 chainNetHg19,622 chainNetHg19,1063 chainNetHg19Viewchain,2 chainNetHg19Viewnet,2 chainNetMm10,1063 chainNetMm39,1064 chainNetMonDom5,1064 chainNetRn6,1067 chainRn6,1064 genscan,217 nestedRepeats,404 netCavPor3,1070 netHg19,1 netHg19,3 netHg19,65 netHg19,96 netHg19,148 netHg19,266 netHg19,291 netHg19,572 netHg19,620 netHg19,1061 netMm10,1061 netMm39,1061 netMonDom5,1061 netRn6,1064 refSeqComposite,245 refSeqComposite,297 refSeqComposite,557 refSeqComposite,568 refSeqComposite,1072 rmsk,427 transMapEnsemblV5,42 transMapEnsemblV5,362 transMapEnsemblV5,471 transMapEnsemblV5,738 transMapEnsemblV5,806 transMapEstV5,331 transMapEstV5,440 transMapEstV5,707 transMapEstV5,775 transMapRefSeqV5,331 transMapRefSeqV5,440 transMapRefSeqV5,707 transMapRefSeqV5,775 transMapRnaV5,331 transMapRnaV5,440 transMapRnaV5,707 transMapRnaV5,775 transMapV5,104 transMapV5,133 transMapV5,437 transMapV5,546 transMapV5,813 transMapV5,881 uniprot,699 uniprot,940 uniprot,2040 human-mouse chainCavPor3,1105 chainHg19,1096 chainMm10,1096 chainMm39,1096 chainMonDom5,1096 chainNetCavPor3,1108 chainNetHg19,1098 chainNetMm10,1098 chainNetMm39,1099 chainNetMonDom5,1099 chainNetRn6,1102 chainRn6,1099 netCavPor3,1105 netHg19,1096 netMm10,1096 netMm39,1096 netMonDom5,1096 netRn6,1099 hybridizes est,497 intronEst,578 i est,750 est,774 intronEst,834 intronEst,858 mrna,467 mrna,491 xenoMrna,542 xenoMrna,566 i.e intronEst,70 tRNAs,148 icon refSeqComposite,750 id nestedRepeats,10 nestedRepeats,106 refSeqComposite,1129 uniprot,1026 uniprot,1051 uniprot,1060 uniprot,1282 identical uniprot,1106 uniprot,1144 uniprot,1147 identification tRNAs,480 identified blastHg18KG,28 chainCavPor3,946 chainHg19,937 chainMm10,937 chainMm39,937 chainMonDom5,937 chainNetCavPor3,949 chainNetHg19,939 chainNetMm10,939 chainNetMm39,940 chainNetMonDom5,940 chainNetRn6,943 chainRn6,940 est,696 intronEst,777 netCavPor3,946 netHg19,937 netMm10,937 netMm39,937 netMonDom5,937 netRn6,940 refGene,292 refSeqComposite,1260 tRNAs,6 transMapEnsemblV5,512 transMapEstV5,481 transMapRefSeqV5,481 transMapRnaV5,481 transMapV5,587 xenoRefGene,252 identifier refSeqComposite,781 refSeqComposite,800 transMapEnsemblV5,483 transMapEstV5,452 transMapRefSeqV5,452 transMapRnaV5,452 transMapV5,558 identifiers transMapEnsemblV5,384 transMapEnsemblV5,443 transMapEnsemblV5,461 transMapEstV5,353 transMapEstV5,412 transMapEstV5,430 transMapRefSeqV5,353 transMapRefSeqV5,412 transMapRefSeqV5,430 transMapRnaV5,353 transMapRnaV5,412 transMapRnaV5,430 transMapV5,459 transMapV5,518 transMapV5,536 identify geneid,165 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 tRNAs,421 identity est,694 est,702 est,714 intronEst,775 intronEst,783 intronEst,795 microsat,71 mrna,410 mrna,418 mrna,430 nestedRepeats,187 nestedRepeats,222 refGene,290 refGene,298 refGene,310 refSeqComposite,1258 refSeqComposite,1266 refSeqComposite,1278 xenoMrna,484 xenoMrna,493 xenoMrna,505 xenoRefGene,250 xenoRefGene,258 xenoRefGene,270 ideogram cytoBandIdeo,3 cytoBandIdeo,4 ids uniprot,1292 if est,276 est,288 est,304 est,340 est,357 gap,24 intronEst,357 intronEst,369 intronEst,385 intronEst,421 intronEst,438 mrna,222 mrna,234 mrna,250 mrna,286 mrna,303 nestedRepeats,137 refGene,243 transMapEnsemblV5,244 transMapEstV5,213 transMapRefSeqV5,213 transMapRnaV5,213 transMapV5,319 uniprot,602 uniprot,688 uniprot,1030 uniprot,1077 uniprot,1230 uniprot,1261 uniprot,1323 uniprot,1442 xenoMrna,297 xenoMrna,309 xenoMrna,325 xenoMrna,361 xenoMrna,378 xenoRefGene,203 ignored refSeqComposite,1451 uniprot,1426 ii215-25 augustusGene,338 images tRNAs,319 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 implements HLTOGAannotvHg38v1,73 important uniprot,900 improve augustusGene,302 transMapEnsemblV5,770 transMapEstV5,739 transMapRefSeqV5,739 transMapRnaV5,739 transMapV5,845 improved chainCavPor3,1019 chainHg19,1010 chainMm10,1010 chainMm39,1010 chainMonDom5,1010 chainNetCavPor3,1022 chainNetHg19,1012 chainNetMm10,1012 chainNetMm39,1013 chainNetMonDom5,1013 chainNetRn6,1016 chainRn6,1013 netCavPor3,1019 netHg19,1010 netMm10,1010 netMm39,1010 netMonDom5,1010 netRn6,1013 tRNAs,448 in HLTOGAannotvHg38v1,119 HLTOGAannotvHg38v1,124 HLTOGAannotvHg38v1,137 HLTOGAannotvHg38v1,173 HLTOGAannotvHg38v1,220 HLTOGAannotvHg38v1,242 augustusGene,101 blastHg18KG,29 chainCavPor3,33 chainCavPor3,97 chainCavPor3,118 chainCavPor3,150 chainCavPor3,158 chainCavPor3,172 chainCavPor3,191 chainCavPor3,194 chainCavPor3,233 chainCavPor3,254 chainCavPor3,301 chainCavPor3,334 chainCavPor3,364 chainCavPor3,376 chainCavPor3,385 chainCavPor3,403 chainCavPor3,408 chainCavPor3,417 chainCavPor3,429 chainCavPor3,443 chainCavPor3,485 chainCavPor3,502 chainCavPor3,533 chainCavPor3,551 chainCavPor3,565 chainCavPor3,601 chainCavPor3,698 chainCavPor3,786 chainCavPor3,827 chainCavPor3,835 chainCavPor3,851 chainCavPor3,884 chainCavPor3,896 chainCavPor3,1066 chainHg19,31 chainHg19,94 chainHg19,114 chainHg19,146 chainHg19,153 chainHg19,167 chainHg19,186 chainHg19,189 chainHg19,228 chainHg19,249 chainHg19,294 chainHg19,327 chainHg19,357 chainHg19,369 chainHg19,378 chainHg19,396 chainHg19,401 chainHg19,410 chainHg19,422 chainHg19,436 chainHg19,478 chainHg19,495 chainHg19,526 chainHg19,544 chainHg19,558 chainHg19,593 chainHg19,689 chainHg19,777 chainHg19,818 chainHg19,826 chainHg19,842 chainHg19,875 chainHg19,887 chainHg19,1057 chainMm10,31 chainMm10,94 chainMm10,114 chainMm10,146 chainMm10,153 chainMm10,167 chainMm10,186 chainMm10,189 chainMm10,228 chainMm10,249 chainMm10,294 chainMm10,327 chainMm10,357 chainMm10,369 chainMm10,378 chainMm10,396 chainMm10,401 chainMm10,410 chainMm10,422 chainMm10,436 chainMm10,478 chainMm10,495 chainMm10,526 chainMm10,544 chainMm10,558 chainMm10,593 chainMm10,689 chainMm10,777 chainMm10,818 chainMm10,826 chainMm10,842 chainMm10,875 chainMm10,887 chainMm10,1057 chainMm39,31 chainMm39,94 chainMm39,114 chainMm39,146 chainMm39,153 chainMm39,167 chainMm39,186 chainMm39,189 chainMm39,228 chainMm39,249 chainMm39,294 chainMm39,327 chainMm39,357 chainMm39,369 chainMm39,378 chainMm39,396 chainMm39,401 chainMm39,410 chainMm39,422 chainMm39,436 chainMm39,478 chainMm39,495 chainMm39,526 chainMm39,544 chainMm39,558 chainMm39,593 chainMm39,689 chainMm39,777 chainMm39,818 chainMm39,826 chainMm39,842 chainMm39,875 chainMm39,887 chainMm39,1057 chainMonDom5,31 chainMonDom5,94 chainMonDom5,114 chainMonDom5,146 chainMonDom5,153 chainMonDom5,167 chainMonDom5,186 chainMonDom5,189 chainMonDom5,228 chainMonDom5,249 chainMonDom5,294 chainMonDom5,327 chainMonDom5,357 chainMonDom5,369 chainMonDom5,378 chainMonDom5,396 chainMonDom5,401 chainMonDom5,410 chainMonDom5,422 chainMonDom5,436 chainMonDom5,478 chainMonDom5,495 chainMonDom5,526 chainMonDom5,544 chainMonDom5,558 chainMonDom5,593 chainMonDom5,689 chainMonDom5,777 chainMonDom5,818 chainMonDom5,826 chainMonDom5,842 chainMonDom5,875 chainMonDom5,887 chainMonDom5,1057 chainNetCavPor3,36 chainNetCavPor3,100 chainNetCavPor3,121 chainNetCavPor3,153 chainNetCavPor3,161 chainNetCavPor3,175 chainNetCavPor3,194 chainNetCavPor3,197 chainNetCavPor3,236 chainNetCavPor3,257 chainNetCavPor3,304 chainNetCavPor3,337 chainNetCavPor3,367 chainNetCavPor3,379 chainNetCavPor3,388 chainNetCavPor3,406 chainNetCavPor3,411 chainNetCavPor3,420 chainNetCavPor3,432 chainNetCavPor3,446 chainNetCavPor3,488 chainNetCavPor3,505 chainNetCavPor3,536 chainNetCavPor3,554 chainNetCavPor3,568 chainNetCavPor3,604 chainNetCavPor3,701 chainNetCavPor3,789 chainNetCavPor3,830 chainNetCavPor3,838 chainNetCavPor3,854 chainNetCavPor3,887 chainNetCavPor3,899 chainNetCavPor3,1069 chainNetHg19,33 chainNetHg19,96 chainNetHg19,116 chainNetHg19,148 chainNetHg19,155 chainNetHg19,169 chainNetHg19,188 chainNetHg19,191 chainNetHg19,230 chainNetHg19,251 chainNetHg19,296 chainNetHg19,329 chainNetHg19,359 chainNetHg19,371 chainNetHg19,380 chainNetHg19,398 chainNetHg19,403 chainNetHg19,412 chainNetHg19,424 chainNetHg19,438 chainNetHg19,480 chainNetHg19,497 chainNetHg19,528 chainNetHg19,546 chainNetHg19,560 chainNetHg19,595 chainNetHg19,691 chainNetHg19,779 chainNetHg19,820 chainNetHg19,828 chainNetHg19,844 chainNetHg19,877 chainNetHg19,889 chainNetHg19,1059 chainNetMm10,33 chainNetMm10,96 chainNetMm10,116 chainNetMm10,148 chainNetMm10,155 chainNetMm10,169 chainNetMm10,188 chainNetMm10,191 chainNetMm10,230 chainNetMm10,251 chainNetMm10,296 chainNetMm10,329 chainNetMm10,359 chainNetMm10,371 chainNetMm10,380 chainNetMm10,398 chainNetMm10,403 chainNetMm10,412 chainNetMm10,424 chainNetMm10,438 chainNetMm10,480 chainNetMm10,497 chainNetMm10,528 chainNetMm10,546 chainNetMm10,560 chainNetMm10,595 chainNetMm10,691 chainNetMm10,779 chainNetMm10,820 chainNetMm10,828 chainNetMm10,844 chainNetMm10,877 chainNetMm10,889 chainNetMm10,1059 chainNetMm39,34 chainNetMm39,97 chainNetMm39,117 chainNetMm39,149 chainNetMm39,156 chainNetMm39,170 chainNetMm39,189 chainNetMm39,192 chainNetMm39,231 chainNetMm39,252 chainNetMm39,297 chainNetMm39,330 chainNetMm39,360 chainNetMm39,372 chainNetMm39,381 chainNetMm39,399 chainNetMm39,404 chainNetMm39,413 chainNetMm39,425 chainNetMm39,439 chainNetMm39,481 chainNetMm39,498 chainNetMm39,529 chainNetMm39,547 chainNetMm39,561 chainNetMm39,596 chainNetMm39,692 chainNetMm39,780 chainNetMm39,821 chainNetMm39,829 chainNetMm39,845 chainNetMm39,878 chainNetMm39,890 chainNetMm39,1060 chainNetMonDom5,34 chainNetMonDom5,97 chainNetMonDom5,117 chainNetMonDom5,149 chainNetMonDom5,156 chainNetMonDom5,170 chainNetMonDom5,189 chainNetMonDom5,192 chainNetMonDom5,231 chainNetMonDom5,252 chainNetMonDom5,297 chainNetMonDom5,330 chainNetMonDom5,360 chainNetMonDom5,372 chainNetMonDom5,381 chainNetMonDom5,399 chainNetMonDom5,404 chainNetMonDom5,413 chainNetMonDom5,425 chainNetMonDom5,439 chainNetMonDom5,481 chainNetMonDom5,498 chainNetMonDom5,529 chainNetMonDom5,547 chainNetMonDom5,561 chainNetMonDom5,596 chainNetMonDom5,692 chainNetMonDom5,780 chainNetMonDom5,821 chainNetMonDom5,829 chainNetMonDom5,845 chainNetMonDom5,878 chainNetMonDom5,890 chainNetMonDom5,1060 chainNetRn6,35 chainNetRn6,99 chainNetRn6,119 chainNetRn6,151 chainNetRn6,158 chainNetRn6,172 chainNetRn6,191 chainNetRn6,194 chainNetRn6,233 chainNetRn6,254 chainNetRn6,299 chainNetRn6,333 chainNetRn6,363 chainNetRn6,375 chainNetRn6,384 chainNetRn6,402 chainNetRn6,407 chainNetRn6,416 chainNetRn6,428 chainNetRn6,442 chainNetRn6,484 chainNetRn6,501 chainNetRn6,532 chainNetRn6,550 chainNetRn6,564 chainNetRn6,599 chainNetRn6,695 chainNetRn6,783 chainNetRn6,824 chainNetRn6,832 chainNetRn6,848 chainNetRn6,881 chainNetRn6,893 chainNetRn6,1063 chainRn6,32 chainRn6,96 chainRn6,116 chainRn6,148 chainRn6,155 chainRn6,169 chainRn6,188 chainRn6,191 chainRn6,230 chainRn6,251 chainRn6,296 chainRn6,330 chainRn6,360 chainRn6,372 chainRn6,381 chainRn6,399 chainRn6,404 chainRn6,413 chainRn6,425 chainRn6,439 chainRn6,481 chainRn6,498 chainRn6,529 chainRn6,547 chainRn6,561 chainRn6,596 chainRn6,692 chainRn6,780 chainRn6,821 chainRn6,829 chainRn6,845 chainRn6,878 chainRn6,890 chainRn6,1060 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ensGene,37 ensGene,50 ensGene,83 ensGene,90 ensGene,95 est,21 est,34 est,57 est,148 est,169 est,192 est,202 est,220 est,273 est,395 est,528 est,576 est,685 gap,12 gap,21 gap,91 gap,94 gap,145 gap,158 gc5Base,5 gc5Base,26 gc5Base,43 geneid,45 geneid,57 geneid,66 geneid,186 genscan,101 genscan,150 genscan,162 genscan,165 genscan,184 genscan,188 genscan,198 genscan,216 gold,56 gold,117 intronEst,23 intronEst,46 intronEst,84 intronEst,98 intronEst,141 intronEst,229 intronEst,250 intronEst,273 intronEst,283 intronEst,301 intronEst,354 intronEst,476 intronEst,609 intronEst,657 intronEst,766 intronEst,802 microsat,42 microsat,49 mrna,19 mrna,38 mrna,94 mrna,115 mrna,138 mrna,148 mrna,166 mrna,219 mrna,401 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netCavPor3,33 netCavPor3,97 netCavPor3,118 netCavPor3,150 netCavPor3,158 netCavPor3,172 netCavPor3,191 netCavPor3,194 netCavPor3,233 netCavPor3,254 netCavPor3,301 netCavPor3,334 netCavPor3,364 netCavPor3,376 netCavPor3,385 netCavPor3,403 netCavPor3,408 netCavPor3,417 netCavPor3,429 netCavPor3,443 netCavPor3,485 netCavPor3,502 netCavPor3,533 netCavPor3,551 netCavPor3,565 netCavPor3,601 netCavPor3,698 netCavPor3,786 netCavPor3,827 netCavPor3,835 netCavPor3,851 netCavPor3,884 netCavPor3,896 netCavPor3,1066 netHg19,31 netHg19,94 netHg19,114 netHg19,146 netHg19,153 netHg19,167 netHg19,186 netHg19,189 netHg19,228 netHg19,249 netHg19,294 netHg19,327 netHg19,357 netHg19,369 netHg19,378 netHg19,396 netHg19,401 netHg19,410 netHg19,422 netHg19,436 netHg19,478 netHg19,495 netHg19,526 netHg19,544 netHg19,558 netHg19,593 netHg19,689 netHg19,777 netHg19,818 netHg19,826 netHg19,842 netHg19,875 netHg19,887 netHg19,1057 netMm10,31 netMm10,94 netMm10,114 netMm10,146 netMm10,153 netMm10,167 netMm10,186 netMm10,189 netMm10,228 netMm10,249 netMm10,294 netMm10,327 netMm10,357 netMm10,369 netMm10,378 netMm10,396 netMm10,401 netMm10,410 netMm10,422 netMm10,436 netMm10,478 netMm10,495 netMm10,526 netMm10,544 netMm10,558 netMm10,593 netMm10,689 netMm10,777 netMm10,818 netMm10,826 netMm10,842 netMm10,875 netMm10,887 netMm10,1057 netMm39,31 netMm39,94 netMm39,114 netMm39,146 netMm39,153 netMm39,167 netMm39,186 netMm39,189 netMm39,228 netMm39,249 netMm39,294 netMm39,327 netMm39,357 netMm39,369 netMm39,378 netMm39,396 netMm39,401 netMm39,410 netMm39,422 netMm39,436 netMm39,478 netMm39,495 netMm39,526 netMm39,544 netMm39,558 netMm39,593 netMm39,689 netMm39,777 netMm39,818 netMm39,826 netMm39,842 netMm39,875 netMm39,887 netMm39,1057 netMonDom5,31 netMonDom5,94 netMonDom5,114 netMonDom5,146 netMonDom5,153 netMonDom5,167 netMonDom5,186 netMonDom5,189 netMonDom5,228 netMonDom5,249 netMonDom5,294 netMonDom5,327 netMonDom5,357 netMonDom5,369 netMonDom5,378 netMonDom5,396 netMonDom5,401 netMonDom5,410 netMonDom5,422 netMonDom5,436 netMonDom5,478 netMonDom5,495 netMonDom5,526 netMonDom5,544 netMonDom5,558 netMonDom5,593 netMonDom5,689 netMonDom5,777 netMonDom5,818 netMonDom5,826 netMonDom5,842 netMonDom5,875 netMonDom5,887 netMonDom5,1057 netRn6,32 netRn6,96 netRn6,116 netRn6,148 netRn6,155 netRn6,169 netRn6,188 netRn6,191 netRn6,230 netRn6,251 netRn6,296 netRn6,330 netRn6,360 netRn6,372 netRn6,381 netRn6,399 netRn6,404 netRn6,413 netRn6,425 netRn6,439 netRn6,481 netRn6,498 netRn6,529 netRn6,547 netRn6,561 netRn6,596 netRn6,692 netRn6,780 netRn6,821 netRn6,829 netRn6,845 netRn6,878 netRn6,890 netRn6,1060 quality,23 quality,58 refGene,281 refSeqComposite,61 refSeqComposite,277 refSeqComposite,396 refSeqComposite,756 refSeqComposite,988 refSeqComposite,1035 refSeqComposite,1062 refSeqComposite,1139 refSeqComposite,1165 refSeqComposite,1180 refSeqComposite,1249 refSeqComposite,1296 refSeqComposite,1340 refSeqComposite,1355 refSeqComposite,1364 refSeqComposite,1374 refSeqComposite,1384 refSeqComposite,1443 refSeqComposite,1452 refSeqComposite,1467 refSeqComposite,1475 refSeqComposite,1535 refSeqComposite,1620 refSeqComposite,1657 refSeqComposite,1663 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 tRNAs,155 tRNAs,158 tRNAs,194 tRNAs,203 tRNAs,222 tRNAs,240 tRNAs,249 tRNAs,378 tRNAs,425 tRNAs,454 tRNAs,486 transMapEnsemblV5,33 transMapEnsemblV5,82 transMapEnsemblV5,89 transMapEnsemblV5,160 transMapEnsemblV5,335 transMapEnsemblV5,359 transMapEnsemblV5,367 transMapEnsemblV5,402 transMapEnsemblV5,412 transMapEnsemblV5,446 transMapEnsemblV5,492 transMapEnsemblV5,542 transMapEnsemblV5,584 transMapEstV5,31 transMapEstV5,51 transMapEstV5,58 transMapEstV5,129 transMapEstV5,304 transMapEstV5,328 transMapEstV5,336 transMapEstV5,371 transMapEstV5,381 transMapEstV5,415 transMapEstV5,461 transMapEstV5,511 transMapEstV5,553 transMapRefSeqV5,31 transMapRefSeqV5,51 transMapRefSeqV5,58 transMapRefSeqV5,129 transMapRefSeqV5,304 transMapRefSeqV5,328 transMapRefSeqV5,336 transMapRefSeqV5,371 transMapRefSeqV5,381 transMapRefSeqV5,415 transMapRefSeqV5,461 transMapRefSeqV5,511 transMapRefSeqV5,553 transMapRnaV5,31 transMapRnaV5,51 transMapRnaV5,58 transMapRnaV5,129 transMapRnaV5,304 transMapRnaV5,328 transMapRnaV5,336 transMapRnaV5,371 transMapRnaV5,381 transMapRnaV5,415 transMapRnaV5,461 transMapRnaV5,511 transMapRnaV5,553 transMapV5,30 transMapV5,52 transMapV5,59 transMapV5,76 transMapV5,235 transMapV5,410 transMapV5,434 transMapV5,442 transMapV5,477 transMapV5,487 transMapV5,521 transMapV5,567 transMapV5,617 transMapV5,659 uniprot,67 uniprot,148 uniprot,161 uniprot,177 uniprot,242 uniprot,291 uniprot,313 uniprot,427 uniprot,505 uniprot,509 uniprot,570 uniprot,581 uniprot,586 uniprot,591 uniprot,737 uniprot,755 uniprot,854 uniprot,870 uniprot,882 uniprot,1066 uniprot,1132 uniprot,1151 uniprot,1171 uniprot,1190 uniprot,1199 uniprot,1252 uniprot,1258 uniprot,1272 uniprot,1466 uniprot,1637 uniprot,1663 uniprot,1734 uniprot,1752 uniprot,1849 uniprot,1864 xenoMrna,22 xenoMrna,43 xenoMrna,66 xenoMrna,169 xenoMrna,190 xenoMrna,213 xenoMrna,223 xenoMrna,241 xenoMrna,294 xenoMrna,475 xenoRefGene,241 inactivating HLTOGAannotvHg38v1,185 HLTOGAannotvHg38v1,232 HLTOGAannotvHg38v1,240 HLTOGAannotvHg38v1,275 HLTOGAannotvHg38v1,305 include est,130 est,335 est,359 intronEst,211 intronEst,416 intronEst,440 mrna,76 mrna,281 mrna,305 refSeqComposite,187 rmsk,159 rmsk,172 xenoMrna,151 xenoMrna,356 xenoMrna,380 included augustusGene,160 blastHg18KG,113 blastHg18KG,136 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 includes refSeqComposite,216 refSeqComposite,262 refSeqComposite,346 refSeqComposite,648 rmsk,198 uniprot,1587 including est,5 intronEst,120 refSeqComposite,795 rmsk,188 uniprot,1700 inclusion refSeqComposite,395 inconsistency refSeqComposite,873 incorporate refSeqComposite,660 incorrect uniprot,1361 indels microsat,74 independently refSeqComposite,293 indexing refSeqComposite,1462 indicate chainCavPor3,141 chainCavPor3,248 chainHg19,137 chainHg19,243 chainMm10,137 chainMm10,243 chainMm39,137 chainMm39,243 chainMonDom5,137 chainMonDom5,243 chainNetCavPor3,144 chainNetCavPor3,251 chainNetHg19,139 chainNetHg19,245 chainNetMm10,139 chainNetMm10,245 chainNetMm39,140 chainNetMm39,246 chainNetMonDom5,140 chainNetMonDom5,246 chainNetRn6,142 chainNetRn6,248 chainRn6,139 chainRn6,245 est,68 mrna,49 nestedRepeats,153 netCavPor3,141 netCavPor3,248 netHg19,137 netHg19,243 netMm10,137 netMm10,243 netMm39,137 netMm39,243 netMonDom5,137 netMonDom5,243 netRn6,139 netRn6,245 tRNAs,137 tRNAs,187 xenoMrna,54 indicates est,76 intronEst,147 intronEst,157 quality,34 refGene,98 refSeqComposite,605 xenoMrna,71 xenoMrna,93 xenoRefGene,58 individual chainCavPor3,245 chainCavPor3,500 chainHg19,240 chainHg19,493 chainMm10,240 chainMm10,493 chainMm39,240 chainMm39,493 chainMonDom5,240 chainMonDom5,493 chainNetCavPor3,248 chainNetCavPor3,503 chainNetHg19,242 chainNetHg19,495 chainNetMm10,242 chainNetMm10,495 chainNetMm39,243 chainNetMm39,496 chainNetMonDom5,243 chainNetMonDom5,496 chainNetRn6,245 chainNetRn6,499 chainRn6,242 chainRn6,496 netCavPor3,245 netCavPor3,500 netHg19,240 netHg19,493 netMm10,240 netMm10,493 netMm39,240 netMm39,493 netMonDom5,240 netMonDom5,493 netRn6,242 netRn6,496 refSeqComposite,676 refSeqComposite,701 refSeqComposite,745 refSeqComposite,1490 transMapEnsemblV5,600 transMapEstV5,569 transMapRefSeqV5,569 transMapRnaV5,569 transMapV5,675 infer HLTOGAannotvHg38v1,19 inference HLTOGAannotvHg38v1,361 inferring HLTOGAannotvHg38v1,32 information HLTOGAannotvHg38v1,300 augustusGene,36 blastHg18KG,149 chainCavPor3,463 chainCavPor3,476 chainCavPor3,482 chainCavPor3,852 chainHg19,456 chainHg19,469 chainHg19,475 chainHg19,843 chainMm10,456 chainMm10,469 chainMm10,475 chainMm10,843 chainMm39,456 chainMm39,469 chainMm39,475 chainMm39,843 chainMonDom5,456 chainMonDom5,469 chainMonDom5,475 chainMonDom5,843 chainNetCavPor3,466 chainNetCavPor3,479 chainNetCavPor3,485 chainNetCavPor3,855 chainNetHg19,458 chainNetHg19,471 chainNetHg19,477 chainNetHg19,845 chainNetMm10,458 chainNetMm10,471 chainNetMm10,477 chainNetMm10,845 chainNetMm39,459 chainNetMm39,472 chainNetMm39,478 chainNetMm39,846 chainNetMonDom5,459 chainNetMonDom5,472 chainNetMonDom5,478 chainNetMonDom5,846 chainNetRn6,462 chainNetRn6,475 chainNetRn6,481 chainNetRn6,849 chainRn6,459 chainRn6,472 chainRn6,478 chainRn6,846 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 ensGene,19 ensGene,159 est,75 est,410 est,434 gc5Base,55 genscan,51 genscan,126 intronEst,156 intronEst,491 intronEst,515 microsat,97 mrna,347 mrna,373 nestedRepeats,53 nestedRepeats,301 netCavPor3,463 netCavPor3,476 netCavPor3,482 netCavPor3,852 netHg19,456 netHg19,469 netHg19,475 netHg19,843 netMm10,456 netMm10,469 netMm10,475 netMm10,843 netMm39,456 netMm39,469 netMm39,475 netMm39,843 netMonDom5,456 netMonDom5,469 netMonDom5,475 netMonDom5,843 netRn6,459 netRn6,472 netRn6,478 netRn6,846 quality,70 refGene,71 refGene,215 refSeqComposite,130 refSeqComposite,665 refSeqComposite,849 refSeqComposite,1184 refSeqComposite,1379 refSeqComposite,1383 rmsk,89 rmsk,324 simpleRepeat,58 transMapEnsemblV5,131 transMapEnsemblV5,148 transMapEnsemblV5,566 transMapEstV5,100 transMapEstV5,117 transMapEstV5,535 transMapRefSeqV5,100 transMapRefSeqV5,117 transMapRefSeqV5,535 transMapRnaV5,100 transMapRnaV5,117 transMapRnaV5,535 transMapV5,206 transMapV5,223 transMapV5,641 uniprot,678 uniprot,1842 uniprot,2038 xenoMrna,61 xenoMrna,422 xenoMrna,448 xenoRefGene,175 initial refSeqComposite,679 tRNAs,47 initiate rmsk,316 initio augustusGene,4 augustusGene,17 input HLTOGAannotvHg38v1,43 uniprot,1952 insdc ucscToINSDC,1 ucscToINSDC,4 ucscToINSDC,32 inserted chainCavPor3,576 chainCavPor3,908 chainHg19,569 chainHg19,899 chainMm10,569 chainMm10,899 chainMm39,569 chainMm39,899 chainMonDom5,569 chainMonDom5,899 chainNetCavPor3,579 chainNetCavPor3,911 chainNetHg19,571 chainNetHg19,901 chainNetMm10,571 chainNetMm10,901 chainNetMm39,572 chainNetMm39,902 chainNetMonDom5,572 chainNetMonDom5,902 chainNetRn6,575 chainNetRn6,905 chainRn6,572 chainRn6,902 netCavPor3,576 netCavPor3,908 netHg19,569 netHg19,899 netMm10,569 netMm10,899 netMm39,569 netMm39,899 netMonDom5,569 netMonDom5,899 netRn6,572 netRn6,902 insertion chainCavPor3,157 chainHg19,152 chainMm10,152 chainMm39,152 chainMonDom5,152 chainNetCavPor3,160 chainNetHg19,154 chainNetMm10,154 chainNetMm39,155 chainNetMonDom5,155 chainNetRn6,157 chainRn6,154 est,439 intronEst,520 mrna,378 netCavPor3,157 netHg19,152 netMm10,152 netMm39,152 netMonDom5,152 netRn6,154 rmsk,223 xenoMrna,453 insertions nestedRepeats,86 nestedRepeats,92 refSeqComposite,945 inside uniprot,560 inspected tRNAs,228 inspection uniprot,1653 instead refGene,158 refSeqComposite,782 xenoRefGene,118 institute gap,186 gold,156 nestedRepeats,55 rmsk,91 instructions ensGene,117 transMapEnsemblV5,631 transMapEstV5,600 transMapRefSeqV5,600 transMapRnaV5,600 transMapV5,706 uniprot,1785 intact HLTOGAannotvHg38v1,38 HLTOGAannotvHg38v1,143 HLTOGAannotvHg38v1,166 integrated tRNAs,27 integrates HLTOGAannotvHg38v1,29 integrating HLTOGAannotvHg38v1,356 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 ensGene,71 refSeqComposite,1312 transMapEnsemblV5,534 transMapEstV5,503 transMapRefSeqV5,503 transMapRnaV5,503 transMapV5,609 uniprot,1725 interactions uniprot,316 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 ensGene,63 refSeqComposite,1303 transMapEnsemblV5,526 transMapEstV5,495 transMapRefSeqV5,495 transMapRnaV5,495 transMapV5,601 uniprot,1717 interest unipInterest,1 unipInterest,5 uniprot,299 intergenic HLTOGAannotvHg38v1,84 genscan,47 international est,735 intronEst,819 mrna,452 transMapEnsemblV5,692 transMapEstV5,661 transMapRefSeqV5,661 transMapRnaV5,661 transMapV5,767 ucscToINSDC,5 ucscToINSDC,27 xenoMrna,527 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 into chainCavPor3,607 chainCavPor3,619 chainCavPor3,636 chainCavPor3,811 chainHg19,599 chainHg19,611 chainHg19,627 chainHg19,802 chainMm10,599 chainMm10,611 chainMm10,627 chainMm10,802 chainMm39,599 chainMm39,611 chainMm39,627 chainMm39,802 chainMonDom5,599 chainMonDom5,611 chainMonDom5,627 chainMonDom5,802 chainNetCavPor3,610 chainNetCavPor3,622 chainNetCavPor3,639 chainNetCavPor3,814 chainNetHg19,601 chainNetHg19,613 chainNetHg19,629 chainNetHg19,804 chainNetMm10,601 chainNetMm10,613 chainNetMm10,629 chainNetMm10,804 chainNetMm39,602 chainNetMm39,614 chainNetMm39,630 chainNetMm39,805 chainNetMonDom5,602 chainNetMonDom5,614 chainNetMonDom5,630 chainNetMonDom5,805 chainNetRn6,605 chainNetRn6,617 chainNetRn6,633 chainNetRn6,808 chainRn6,602 chainRn6,614 chainRn6,630 chainRn6,805 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 est,252 est,457 est,464 est,609 gold,24 gold,31 intronEst,333 intronEst,538 intronEst,545 intronEst,690 mrna,198 netCavPor3,607 netCavPor3,619 netCavPor3,636 netCavPor3,811 netHg19,599 netHg19,611 netHg19,627 netHg19,802 netMm10,599 netMm10,611 netMm10,627 netMm10,802 netMm39,599 netMm39,611 netMm39,627 netMm39,802 netMonDom5,599 netMonDom5,611 netMonDom5,627 netMonDom5,802 netRn6,602 netRn6,614 netRn6,630 netRn6,805 tRNAs,309 uniprot,57 xenoMrna,273 intron augustusGene,88 augustusGene,330 est,658 intronEst,69 intronEst,739 intronic HLTOGAannotvHg38v1,82 introns chainCavPor3,58 chainHg19,56 chainMm10,56 chainMm39,56 chainMonDom5,56 chainNetCavPor3,61 chainNetHg19,58 chainNetMm10,58 chainNetMm39,59 chainNetMonDom5,59 chainNetRn6,60 chainRn6,57 est,675 genscan,45 intronEst,756 netCavPor3,58 netHg19,56 netMm10,56 netMm39,56 netMonDom5,56 netRn6,57 refSeqComposite,936 refSeqComposite,1027 inv chainCavPor3,538 chainHg19,531 chainMm10,531 chainMm39,531 chainMonDom5,531 chainNetCavPor3,541 chainNetHg19,533 chainNetMm10,533 chainNetMm39,534 chainNetMonDom5,534 chainNetRn6,537 chainRn6,534 netCavPor3,538 netHg19,531 netMm10,531 netMm39,531 netMonDom5,531 netRn6,534 inversions chainCavPor3,114 chainCavPor3,179 chainHg19,110 chainHg19,174 chainMm10,110 chainMm10,174 chainMm39,110 chainMm39,174 chainMonDom5,110 chainMonDom5,174 chainNetCavPor3,117 chainNetCavPor3,182 chainNetHg19,112 chainNetHg19,176 chainNetMm10,112 chainNetMm10,176 chainNetMm39,113 chainNetMm39,177 chainNetMonDom5,113 chainNetMonDom5,177 chainNetRn6,115 chainNetRn6,179 chainRn6,112 chainRn6,176 netCavPor3,114 netCavPor3,179 netHg19,110 netHg19,174 netMm10,110 netMm10,174 netMm39,110 netMm39,174 netMonDom5,110 netMonDom5,174 netRn6,112 netRn6,176 invertebrate xenoMrna,20 inverted chainCavPor3,870 chainHg19,861 chainMm10,861 chainMm39,861 chainMonDom5,861 chainNetCavPor3,873 chainNetHg19,863 chainNetMm10,863 chainNetMm39,864 chainNetMonDom5,864 chainNetRn6,867 chainRn6,864 netCavPor3,870 netHg19,861 netMm10,861 netMm39,861 netMonDom5,861 netRn6,864 invisible refSeqComposite,1034 refSeqComposite,1061 involve chainCavPor3,169 chainHg19,164 chainMm10,164 chainMm39,164 chainMonDom5,164 chainNetCavPor3,172 chainNetHg19,166 chainNetMm10,166 chainNetMm39,167 chainNetMonDom5,167 chainNetRn6,169 chainRn6,166 netCavPor3,169 netHg19,164 netMm10,164 netMm39,164 netMonDom5,164 netRn6,166 involved tRNAs,193 is HLTOGAannotvHg38v1,24 HLTOGAannotvHg38v1,104 HLTOGAannotvHg38v1,135 HLTOGAannotvHg38v1,151 HLTOGAannotvHg38v1,171 HLTOGAannotvHg38v1,197 HLTOGAannotvHg38v1,218 HLTOGAannotvHg38v1,238 HLTOGAannotvHg38v1,251 HLTOGAannotvHg38v1,281 HLTOGAannotvHg38v1,287 HLTOGAannotvHg38v1,328 blastHg18KG,139 chainCavPor3,283 chainCavPor3,304 chainCavPor3,483 chainHg19,277 chainHg19,297 chainHg19,476 chainMm10,277 chainMm10,297 chainMm10,476 chainMm39,277 chainMm39,297 chainMm39,476 chainMonDom5,277 chainMonDom5,297 chainMonDom5,476 chainNetCavPor3,286 chainNetCavPor3,307 chainNetCavPor3,486 chainNetHg19,279 chainNetHg19,299 chainNetHg19,478 chainNetMm10,279 chainNetMm10,299 chainNetMm10,478 chainNetMm39,280 chainNetMm39,300 chainNetMm39,479 chainNetMonDom5,280 chainNetMonDom5,300 chainNetMonDom5,479 chainNetRn6,282 chainNetRn6,302 chainNetRn6,482 chainRn6,279 chainRn6,299 chainRn6,479 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 est,292 est,308 est,344 est,361 est,450 est,462 est,471 est,491 est,620 est,663 gap,39 gap,46 gap,54 gap,99 gap,109 gc5Base,32 geneid,33 geneid,51 geneid,130 gold,109 gold,115 gold,147 intronEst,102 intronEst,373 intronEst,389 intronEst,425 intronEst,442 intronEst,531 intronEst,543 intronEst,552 intronEst,572 intronEst,701 intronEst,744 microsat,88 mrna,238 mrna,254 mrna,290 mrna,307 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netCavPor3,283 netCavPor3,304 netCavPor3,483 netHg19,277 netHg19,297 netHg19,476 netMm10,277 netMm10,297 netMm10,476 netMm39,277 netMm39,297 netMm39,476 netMonDom5,277 netMonDom5,297 netMonDom5,476 netRn6,279 netRn6,299 netRn6,479 refSeqComposite,146 refSeqComposite,242 refSeqComposite,316 refSeqComposite,533 refSeqComposite,563 refSeqComposite,574 refSeqComposite,710 refSeqComposite,1055 refSeqComposite,1198 refSeqComposite,1213 refSeqComposite,1429 refSeqComposite,1435 rmsk,95 rmsk,360 simpleRepeat,28 tRNAs,25 tRNAs,125 transMapEnsemblV5,39 transMapEnsemblV5,275 transMapEnsemblV5,418 transMapEnsemblV5,422 transMapEnsemblV5,434 transMapEnsemblV5,480 transMapEstV5,244 transMapEstV5,387 transMapEstV5,391 transMapEstV5,403 transMapEstV5,449 transMapRefSeqV5,244 transMapRefSeqV5,387 transMapRefSeqV5,391 transMapRefSeqV5,403 transMapRefSeqV5,449 transMapRnaV5,244 transMapRnaV5,387 transMapRnaV5,391 transMapRnaV5,403 transMapRnaV5,449 transMapV5,350 transMapV5,493 transMapV5,497 transMapV5,509 transMapV5,555 uniprot,159 uniprot,222 uniprot,417 uniprot,626 uniprot,707 uniprot,839 uniprot,911 uniprot,958 uniprot,972 uniprot,1052 uniprot,1081 uniprot,1209 uniprot,1245 uniprot,1256 uniprot,1264 uniprot,1283 uniprot,1334 uniprot,1390 uniprot,1564 uniprot,1578 uniprot,1603 uniprot,1630 uniprot,1732 xenoMrna,65 xenoMrna,119 xenoMrna,125 xenoMrna,313 xenoMrna,329 xenoMrna,365 xenoMrna,382 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isoform unipAliSwissprot,13 uniprot,157 uniprot,186 uniprot,671 isoforms unipAliSwissprot,17 uniprot,145 uniprot,164 isolated est,451 intronEst,532 isotype tRNAs,248 issue est,765 est,791 intronEst,849 intronEst,875 mrna,482 mrna,508 refGene,394 refGene,428 refSeqComposite,1781 refSeqComposite,1815 tRNAs,388 uniprot,2004 xenoMrna,557 xenoMrna,583 xenoRefGene,353 xenoRefGene,387 it chainCavPor3,92 chainCavPor3,282 chainCavPor3,537 chainCavPor3,549 chainHg19,89 chainHg19,276 chainHg19,530 chainHg19,542 chainMm10,89 chainMm10,276 chainMm10,530 chainMm10,542 chainMm39,89 chainMm39,276 chainMm39,530 chainMm39,542 chainMonDom5,89 chainMonDom5,276 chainMonDom5,530 chainMonDom5,542 chainNetCavPor3,95 chainNetCavPor3,285 chainNetCavPor3,540 chainNetCavPor3,552 chainNetHg19,91 chainNetHg19,278 chainNetHg19,532 chainNetHg19,544 chainNetMm10,91 chainNetMm10,278 chainNetMm10,532 chainNetMm10,544 chainNetMm39,92 chainNetMm39,279 chainNetMm39,533 chainNetMm39,545 chainNetMonDom5,92 chainNetMonDom5,279 chainNetMonDom5,533 chainNetMonDom5,545 chainNetRn6,94 chainNetRn6,281 chainNetRn6,536 chainNetRn6,548 chainRn6,91 chainRn6,278 chainRn6,533 chainRn6,545 est,90 est,104 est,513 gap,45 genscan,143 intronEst,171 intronEst,185 intronEst,594 netCavPor3,92 netCavPor3,282 netCavPor3,537 netCavPor3,549 netHg19,89 netHg19,276 netHg19,530 netHg19,542 netMm10,89 netMm10,276 netMm10,530 netMm10,542 netMm39,89 netMm39,276 netMm39,530 netMm39,542 netMonDom5,89 netMonDom5,276 netMonDom5,530 netMonDom5,542 netRn6,91 netRn6,278 netRn6,533 netRn6,545 refSeqComposite,573 refSeqComposite,1299 uniprot,228 uniprot,625 uniprot,1586 item nestedRepeats,197 refGene,115 refSeqComposite,713 xenoRefGene,75 items chainCavPor3,501 chainHg19,494 chainMm10,494 chainMm39,494 chainMonDom5,494 chainNetCavPor3,504 chainNetHg19,496 chainNetMm10,496 chainNetMm39,497 chainNetMonDom5,497 chainNetRn6,500 chainRn6,497 est,62 est,135 est,145 est,339 intronEst,216 intronEst,226 intronEst,420 mrna,43 mrna,81 mrna,91 mrna,285 nestedRepeats,171 nestedRepeats,180 netCavPor3,501 netHg19,494 netMm10,494 netMm39,494 netMonDom5,494 netRn6,497 refGene,142 refSeqComposite,763 refSeqComposite,962 refSeqComposite,1662 xenoMrna,48 xenoMrna,156 xenoMrna,166 xenoMrna,360 xenoRefGene,102 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 uniprot,230 uniprot,762 uniprot,1316 uniprot,1348 itself uniprot,715 j blastHg18KG,168 cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 ensGene,183 est,754 est,778 genscan,220 intronEst,838 intronEst,862 mrna,471 mrna,495 nestedRepeats,341 refGene,373 refSeqComposite,1760 rmsk,364 tRNAs,429 transMapEnsemblV5,785 transMapEstV5,754 transMapRefSeqV5,754 transMapRnaV5,754 transMapV5,860 xenoMrna,546 xenoMrna,570 xenoRefGene,332 jan chainCavPor3,1112 chainHg19,1103 chainMm10,1103 chainMm39,1103 chainMonDom5,1103 chainNetCavPor3,1115 chainNetHg19,1105 chainNetMm10,1105 chainNetMm39,1106 chainNetMonDom5,1106 chainNetRn6,1109 chainRn6,1106 ensGene,199 est,762 est,787 intronEst,846 intronEst,871 microsat,129 mrna,479 mrna,504 netCavPor3,1112 netHg19,1103 netMm10,1103 netMm39,1103 netMonDom5,1103 netRn6,1106 refGene,391 refGene,424 refSeqComposite,1778 refSeqComposite,1811 simpleRepeat,89 tRNAs,385 uniprot,2001 xenoMrna,554 xenoMrna,579 xenoRefGene,350 xenoRefGene,383 jebb HLTOGAannotvHg38v1,340 jim blastHg18KG,181 blastHg18KG,194 chainCavPor3,968 chainCavPor3,995 chainCavPor3,1013 chainHg19,959 chainHg19,986 chainHg19,1004 chainMm10,959 chainMm10,986 chainMm10,1004 chainMm39,959 chainMm39,986 chainMm39,1004 chainMonDom5,959 chainMonDom5,986 chainMonDom5,1004 chainNetCavPor3,971 chainNetCavPor3,998 chainNetCavPor3,1016 chainNetHg19,961 chainNetHg19,988 chainNetHg19,1006 chainNetMm10,961 chainNetMm10,988 chainNetMm10,1006 chainNetMm39,962 chainNetMm39,989 chainNetMm39,1007 chainNetMonDom5,962 chainNetMonDom5,989 chainNetMonDom5,1007 chainNetRn6,965 chainNetRn6,992 chainNetRn6,1010 chainRn6,962 chainRn6,989 chainRn6,1007 netCavPor3,968 netCavPor3,995 netCavPor3,1013 netHg19,959 netHg19,986 netHg19,1004 netMm10,959 netMm10,986 netMm10,1004 netMm39,959 netMm39,986 netMm39,1004 netMonDom5,959 netMonDom5,986 netMonDom5,1004 netRn6,962 netRn6,989 netRn6,1007 joined chainCavPor3,126 chainHg19,122 chainMm10,122 chainMm39,122 chainMonDom5,122 chainNetCavPor3,129 chainNetHg19,124 chainNetMm10,124 chainNetMm39,125 chainNetMonDom5,125 chainNetRn6,127 chainRn6,124 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netCavPor3,126 netHg19,122 netMm10,122 netMm39,122 netMonDom5,122 netRn6,124 journal nestedRepeats,349 rmsk,372 json refSeqComposite,1356 refSeqComposite,1360 jul chainNetRn6,5 chainNetRn6,70 chainNetRn6,305 chainNetRn6Viewchain,3 chainNetRn6Viewnet,3 chainRn6,4 chainRn6,67 chainRn6,302 cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 netRn6,4 netRn6,67 netRn6,302 jun chainMm39,4 chainMm39,66 chainMm39,300 chainNetMm39,5 chainNetMm39,69 chainNetMm39,303 chainNetMm39Viewchain,3 chainNetMm39Viewnet,3 geneid,171 netMm39,4 netMm39,66 netMm39,300 tRNAs,408 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 jz transMapEnsemblV5,787 transMapEstV5,756 transMapRefSeqV5,756 transMapRnaV5,756 transMapV5,862 k augustusGene,268 est,748 intronEst,832 mrna,465 xenoMrna,540 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,148 genscan,209 karsch-mizrachi est,749 est,773 intronEst,833 intronEst,857 mrna,466 mrna,490 xenoMrna,541 xenoMrna,565 kasif genscan,193 kd refGene,359 refGene,401 refSeqComposite,1746 refSeqComposite,1788 xenoRefGene,318 xenoRefGene,360 kd-tree chainCavPor3,642 chainHg19,633 chainMm10,633 chainMm39,633 chainMonDom5,633 chainNetCavPor3,645 chainNetHg19,635 chainNetMm10,635 chainNetMm39,636 chainNetMonDom5,636 chainNetRn6,639 chainRn6,636 netCavPor3,642 netHg19,633 netMm10,633 netMm39,633 netMonDom5,633 netRn6,636 kd-trees chainCavPor3,660 chainHg19,651 chainMm10,651 chainMm39,651 chainMonDom5,651 chainNetCavPor3,663 chainNetHg19,653 chainNetMm10,653 chainNetMm39,654 chainNetMonDom5,654 chainNetRn6,657 chainRn6,654 netCavPor3,660 netHg19,651 netMm10,651 netMm39,651 netMonDom5,651 netRn6,654 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 uniprot,1486 kent blastHg18KG,182 blastHg18KG,195 chainCavPor3,969 chainCavPor3,996 chainCavPor3,1014 chainCavPor3,1049 chainCavPor3,1091 chainHg19,960 chainHg19,987 chainHg19,1005 chainHg19,1040 chainHg19,1082 chainMm10,960 chainMm10,987 chainMm10,1005 chainMm10,1040 chainMm10,1082 chainMm39,960 chainMm39,987 chainMm39,1005 chainMm39,1040 chainMm39,1082 chainMonDom5,960 chainMonDom5,987 chainMonDom5,1005 chainMonDom5,1040 chainMonDom5,1082 chainNetCavPor3,972 chainNetCavPor3,999 chainNetCavPor3,1017 chainNetCavPor3,1052 chainNetCavPor3,1094 chainNetHg19,962 chainNetHg19,989 chainNetHg19,1007 chainNetHg19,1042 chainNetHg19,1084 chainNetMm10,962 chainNetMm10,989 chainNetMm10,1007 chainNetMm10,1042 chainNetMm10,1084 chainNetMm39,963 chainNetMm39,990 chainNetMm39,1008 chainNetMm39,1043 chainNetMm39,1085 chainNetMonDom5,963 chainNetMonDom5,990 chainNetMonDom5,1008 chainNetMonDom5,1043 chainNetMonDom5,1085 chainNetRn6,966 chainNetRn6,993 chainNetRn6,1011 chainNetRn6,1046 chainNetRn6,1088 chainRn6,963 chainRn6,990 chainRn6,1008 chainRn6,1043 chainRn6,1085 est,797 intronEst,881 mrna,514 netCavPor3,969 netCavPor3,996 netCavPor3,1014 netCavPor3,1049 netCavPor3,1091 netHg19,960 netHg19,987 netHg19,1005 netHg19,1040 netHg19,1082 netMm10,960 netMm10,987 netMm10,1005 netMm10,1040 netMm10,1082 netMm39,960 netMm39,987 netMm39,1005 netMm39,1040 netMm39,1082 netMonDom5,960 netMonDom5,987 netMonDom5,1005 netMonDom5,1040 netMonDom5,1082 netRn6,963 netRn6,990 netRn6,1008 netRn6,1043 netRn6,1085 refGene,340 refSeqComposite,1727 xenoMrna,589 xenoRefGene,300 kept est,720 mrna,436 refGene,316 refSeqComposite,1284 xenoMrna,511 xenoRefGene,276 kirilenko HLTOGAannotvHg38v1,334 km refGene,377 refSeqComposite,1764 xenoRefGene,336 known blastHg18KG,26 chainCavPor3,919 chainHg19,910 chainMm10,910 chainMm39,910 chainMonDom5,910 chainNetCavPor3,922 chainNetHg19,912 chainNetMm10,912 chainNetMm39,913 chainNetMonDom5,913 chainNetRn6,916 chainRn6,913 gold,34 gold,111 netCavPor3,919 netHg19,910 netMm10,910 netMm39,910 netMonDom5,910 netRn6,913 refGene,21 refSeqComposite,501 xenoRefGene,14 kontopoulos HLTOGAannotvHg38v1,350 l HLTOGAannotvHg38v1,353 cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 ensGene,179 transMapEnsemblV5,719 transMapEstV5,688 transMapRefSeqV5,688 transMapRnaV5,688 transMapV5,794 lab HLTOGAannotvHg38v1,323 augustusGene,252 tRNAs,338 label genscan,98 refGene,139 refGene,151 refGene,174 refSeqComposite,760 refSeqComposite,772 refSeqComposite,808 xenoRefGene,99 xenoRefGene,111 xenoRefGene,134 labeled nestedRepeats,132 refGene,144 refSeqComposite,765 uniprot,457 xenoRefGene,104 labeling est,384 intronEst,465 labels nestedRepeats,161 refGene,116 refSeqComposite,714 refSeqComposite,794 xenoRefGene,76 landrum refGene,374 refSeqComposite,1761 xenoRefGene,333 langton transMapEnsemblV5,718 transMapEstV5,687 transMapRefSeqV5,687 transMapRnaV5,687 transMapV5,793 large quality,45 largely chainCavPor3,145 chainHg19,141 chainMm10,141 chainMm39,141 chainMonDom5,141 chainNetCavPor3,148 chainNetHg19,143 chainNetMm10,143 chainNetMm39,144 chainNetMonDom5,144 chainNetRn6,146 chainRn6,143 netCavPor3,145 netHg19,141 netMm10,141 netMm39,141 netMonDom5,141 netRn6,143 larger intronEst,149 largest chainCavPor3,396 chainHg19,389 chainMm10,389 chainMm39,389 chainMonDom5,389 chainNetCavPor3,399 chainNetHg19,391 chainNetMm10,391 chainNetMm39,392 chainNetMonDom5,392 chainNetRn6,395 chainRn6,392 netCavPor3,396 netHg19,389 netMm10,389 netMm39,389 netMonDom5,389 netRn6,392 lastz chainCavPor3,594 chainCavPor3,768 chainCavPor3,917 chainHg19,586 chainHg19,759 chainHg19,908 chainMm10,586 chainMm10,759 chainMm10,908 chainMm39,586 chainMm39,759 chainMm39,908 chainMonDom5,586 chainMonDom5,759 chainMonDom5,908 chainNetCavPor3,597 chainNetCavPor3,771 chainNetCavPor3,920 chainNetHg19,588 chainNetHg19,761 chainNetHg19,910 chainNetMm10,588 chainNetMm10,761 chainNetMm10,910 chainNetMm39,589 chainNetMm39,762 chainNetMm39,911 chainNetMonDom5,589 chainNetMonDom5,762 chainNetMonDom5,911 chainNetRn6,592 chainNetRn6,765 chainNetRn6,914 chainRn6,589 chainRn6,762 chainRn6,911 netCavPor3,594 netCavPor3,768 netCavPor3,917 netHg19,586 netHg19,759 netHg19,908 netMm10,586 netMm10,759 netMm10,908 netMm39,586 netMm39,759 netMm39,908 netMonDom5,586 netMonDom5,759 netMonDom5,908 netRn6,589 netRn6,762 netRn6,911 transMapV5,46 lau transMapEnsemblV5,730 transMapEstV5,699 transMapRefSeqV5,699 transMapRnaV5,699 transMapV5,805 lavtoaxt chainCavPor3,612 chainHg19,604 chainMm10,604 chainMm39,604 chainMonDom5,604 chainNetCavPor3,615 chainNetHg19,606 chainNetMm10,606 chainNetMm39,607 chainNetMonDom5,607 chainNetRn6,610 chainRn6,607 netCavPor3,612 netHg19,604 netMm10,604 netMm39,604 netMonDom5,604 netRn6,607 learning HLTOGAannotvHg38v1,89 least blastHg18KG,126 est,711 intronEst,66 intronEst,81 intronEst,792 microsat,29 microsat,78 mrna,427 refGene,307 refSeqComposite,1275 xenoMrna,502 xenoRefGene,267 lee uniprot,1955 left refSeqComposite,968 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 ctgPos2,41 est,35 est,659 genscan,39 intronEst,47 intronEst,85 intronEst,740 less refGene,271 refSeqComposite,1239 transMapEnsemblV5,372 transMapEstV5,341 transMapRefSeqV5,341 transMapRnaV5,341 transMapV5,447 uniprot,680 xenoRefGene,231 level chainCavPor3,391 chainCavPor3,425 chainCavPor3,430 chainCavPor3,437 chainCavPor3,495 chainCavPor3,522 chainCavPor3,535 chainCavPor3,567 chainHg19,384 chainHg19,418 chainHg19,423 chainHg19,430 chainHg19,488 chainHg19,515 chainHg19,528 chainHg19,560 chainMm10,384 chainMm10,418 chainMm10,423 chainMm10,430 chainMm10,488 chainMm10,515 chainMm10,528 chainMm10,560 chainMm39,384 chainMm39,418 chainMm39,423 chainMm39,430 chainMm39,488 chainMm39,515 chainMm39,528 chainMm39,560 chainMonDom5,384 chainMonDom5,418 chainMonDom5,423 chainMonDom5,430 chainMonDom5,488 chainMonDom5,515 chainMonDom5,528 chainMonDom5,560 chainNetCavPor3,394 chainNetCavPor3,428 chainNetCavPor3,433 chainNetCavPor3,440 chainNetCavPor3,498 chainNetCavPor3,525 chainNetCavPor3,538 chainNetCavPor3,570 chainNetHg19,386 chainNetHg19,420 chainNetHg19,425 chainNetHg19,432 chainNetHg19,490 chainNetHg19,517 chainNetHg19,530 chainNetHg19,562 chainNetMm10,386 chainNetMm10,420 chainNetMm10,425 chainNetMm10,432 chainNetMm10,490 chainNetMm10,517 chainNetMm10,530 chainNetMm10,562 chainNetMm39,387 chainNetMm39,421 chainNetMm39,426 chainNetMm39,433 chainNetMm39,491 chainNetMm39,518 chainNetMm39,531 chainNetMm39,563 chainNetMonDom5,387 chainNetMonDom5,421 chainNetMonDom5,426 chainNetMonDom5,433 chainNetMonDom5,491 chainNetMonDom5,518 chainNetMonDom5,531 chainNetMonDom5,563 chainNetRn6,390 chainNetRn6,424 chainNetRn6,429 chainNetRn6,436 chainNetRn6,494 chainNetRn6,521 chainNetRn6,534 chainNetRn6,566 chainRn6,387 chainRn6,421 chainRn6,426 chainRn6,433 chainRn6,491 chainRn6,518 chainRn6,531 chainRn6,563 est,703 intronEst,95 intronEst,784 mrna,419 netCavPor3,391 netCavPor3,425 netCavPor3,430 netCavPor3,437 netCavPor3,495 netCavPor3,522 netCavPor3,535 netCavPor3,567 netHg19,384 netHg19,418 netHg19,423 netHg19,430 netHg19,488 netHg19,515 netHg19,528 netHg19,560 netMm10,384 netMm10,418 netMm10,423 netMm10,430 netMm10,488 netMm10,515 netMm10,528 netMm10,560 netMm39,384 netMm39,418 netMm39,423 netMm39,430 netMm39,488 netMm39,515 netMm39,528 netMm39,560 netMonDom5,384 netMonDom5,418 netMonDom5,423 netMonDom5,430 netMonDom5,488 netMonDom5,515 netMonDom5,528 netMonDom5,560 netRn6,387 netRn6,421 netRn6,426 netRn6,433 netRn6,491 netRn6,518 netRn6,531 netRn6,563 refGene,100 refGene,299 refSeqComposite,607 refSeqComposite,627 refSeqComposite,1267 rmsk,205 xenoMrna,494 xenoRefGene,60 xenoRefGene,259 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 libraries est,557 intronEst,638 nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 lifted uniprot,1492 lifting uniprot,1843 liftover uniprot,887 uniprot,1878 uniprot,1897 uniprot,1920 uniprot,1924 uniprot,1932 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 refGene,109 refSeqComposite,616 unipAliSwissprot,14 uniprot,506 uniprot,592 xenoRefGene,69 light-blue uniprot,178 lighter rmsk,237 like chainCavPor3,49 chainCavPor3,57 chainHg19,47 chainHg19,55 chainMm10,47 chainMm10,55 chainMm39,47 chainMm39,55 chainMonDom5,47 chainMonDom5,55 chainNetCavPor3,52 chainNetCavPor3,60 chainNetHg19,49 chainNetHg19,57 chainNetMm10,49 chainNetMm10,57 chainNetMm39,50 chainNetMm39,58 chainNetMonDom5,50 chainNetMonDom5,58 chainNetRn6,51 chainNetRn6,59 chainRn6,48 chainRn6,56 ensGene,148 netCavPor3,49 netCavPor3,57 netHg19,47 netHg19,55 netMm10,47 netMm10,55 netMm39,47 netMm39,55 netMonDom5,47 netMonDom5,55 netRn6,48 netRn6,56 refSeqComposite,82 refSeqComposite,1610 uniprot,1541 likely HLTOGAannotvHg38v1,160 augustusGene,111 microsat,17 refSeqComposite,944 tRNAs,126 tRNAs,169 transMapV5,93 line chainCavPor3,473 chainHg19,466 chainMm10,466 chainMm39,466 chainMonDom5,466 chainNetCavPor3,476 chainNetHg19,468 chainNetMm10,468 chainNetMm39,469 chainNetMonDom5,469 chainNetRn6,472 chainRn6,469 gap,53 gold,114 nestedRepeats,151 netCavPor3,473 netHg19,466 netMm10,466 netMm39,466 netMonDom5,466 netRn6,469 refSeqComposite,999 refSeqComposite,1010 refSeqComposite,1609 rmsk,165 uniprot,1872 uniprot,1876 line-up chainCavPor3,540 chainHg19,533 chainMm10,533 chainMm39,533 chainMonDom5,533 chainNetCavPor3,543 chainNetHg19,535 chainNetMm10,535 chainNetMm39,536 chainNetMonDom5,536 chainNetRn6,539 chainRn6,536 netCavPor3,540 netHg19,533 netMm10,533 netMm39,533 netMonDom5,533 netRn6,536 line-ups chainCavPor3,525 chainHg19,518 chainMm10,518 chainMm39,518 chainMonDom5,518 chainNetCavPor3,528 chainNetHg19,520 chainNetMm10,520 chainNetMm39,521 chainNetMonDom5,521 chainNetRn6,524 chainRn6,521 netCavPor3,525 netHg19,518 netMm10,518 netMm39,518 netMonDom5,518 netRn6,521 lineage transMapEnsemblV5,807 transMapEstV5,776 transMapRefSeqV5,776 transMapRnaV5,776 transMapV5,882 lineage-specific chainCavPor3,943 chainHg19,934 chainMm10,934 chainMm39,934 chainMonDom5,934 chainNetCavPor3,946 chainNetHg19,936 chainNetMm10,936 chainNetMm39,937 chainNetMonDom5,937 chainNetRn6,940 chainRn6,937 netCavPor3,943 netHg19,934 netMm10,934 netMm39,934 netMonDom5,934 netRn6,937 linear chainCavPor3,702 chainHg19,693 chainMm10,693 chainMm39,693 chainMonDom5,693 chainNetCavPor3,705 chainNetHg19,695 chainNetMm10,695 chainNetMm39,696 chainNetMonDom5,696 chainNetRn6,699 chainRn6,696 netCavPor3,702 netHg19,693 netMm10,693 netMm39,693 netMonDom5,693 netRn6,696 lineargap chainCavPor3,708 chainHg19,699 chainMm10,699 chainMm39,699 chainMonDom5,699 chainNetCavPor3,711 chainNetHg19,701 chainNetMm10,701 chainNetMm39,702 chainNetMonDom5,702 chainNetRn6,705 chainRn6,702 netCavPor3,708 netHg19,699 netMm10,699 netMm39,699 netMonDom5,699 netRn6,702 lines chainCavPor3,133 chainCavPor3,140 chainCavPor3,163 chainCavPor3,453 chainHg19,129 chainHg19,136 chainHg19,158 chainHg19,446 chainMm10,129 chainMm10,136 chainMm10,158 chainMm10,446 chainMm39,129 chainMm39,136 chainMm39,158 chainMm39,446 chainMonDom5,129 chainMonDom5,136 chainMonDom5,158 chainMonDom5,446 chainNetCavPor3,136 chainNetCavPor3,143 chainNetCavPor3,166 chainNetCavPor3,456 chainNetHg19,131 chainNetHg19,138 chainNetHg19,160 chainNetHg19,448 chainNetMm10,131 chainNetMm10,138 chainNetMm10,160 chainNetMm10,448 chainNetMm39,132 chainNetMm39,139 chainNetMm39,161 chainNetMm39,449 chainNetMonDom5,132 chainNetMonDom5,139 chainNetMonDom5,161 chainNetMonDom5,449 chainNetRn6,134 chainNetRn6,141 chainNetRn6,163 chainNetRn6,452 chainRn6,131 chainRn6,138 chainRn6,160 chainRn6,449 nestedRepeats,131 netCavPor3,133 netCavPor3,140 netCavPor3,163 netCavPor3,453 netHg19,129 netHg19,136 netHg19,158 netHg19,446 netMm10,129 netMm10,136 netMm10,158 netMm10,446 netMm39,129 netMm39,136 netMm39,158 netMm39,446 netMonDom5,129 netMonDom5,136 netMonDom5,158 netMonDom5,446 netRn6,131 netRn6,138 netRn6,160 netRn6,449 refSeqComposite,994 link gc5Base,63 quality,76 uniprot,491 uniprot,1675 linked gap,140 refSeqComposite,1527 refSeqComposite,1642 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 uniprot,1919 lipid uniprot,346 lipman blastHg18KG,161 est,751 est,775 intronEst,835 intronEst,859 mrna,468 mrna,492 xenoMrna,543 xenoMrna,567 lipoification uniprot,577 list est,209 intronEst,290 mrna,155 refSeqComposite,759 refSeqComposite,1686 tRNAs,48 uniprot,979 uniprot,1165 uniprot,1831 xenoMrna,230 listed ensGene,49 literature refSeqComposite,282 refSeqComposite,655 uniprot,434 lm uniprot,2019 local blastHg18KG,164 chainCavPor3,113 chainCavPor3,185 chainHg19,109 chainHg19,180 chainMm10,109 chainMm10,180 chainMm39,109 chainMm39,180 chainMonDom5,109 chainMonDom5,180 chainNetCavPor3,116 chainNetCavPor3,188 chainNetHg19,111 chainNetHg19,182 chainNetMm10,111 chainNetMm10,182 chainNetMm39,112 chainNetMm39,183 chainNetMonDom5,112 chainNetMonDom5,183 chainNetRn6,114 chainNetRn6,185 chainRn6,111 chainRn6,182 ensGene,73 nestedRepeats,98 netCavPor3,113 netCavPor3,185 netHg19,109 netHg19,180 netMm10,109 netMm10,180 netMm39,109 netMm39,180 netMonDom5,109 netMonDom5,180 netRn6,111 netRn6,182 refSeqComposite,1332 located simpleRepeat,21 location chainCavPor3,253 chainHg19,248 chainMm10,248 chainMm39,248 chainMonDom5,248 chainNetCavPor3,256 chainNetHg19,250 chainNetMm10,250 chainNetMm39,251 chainNetMonDom5,251 chainNetRn6,253 chainRn6,250 netCavPor3,253 netHg19,248 netMm10,248 netMm39,248 netMonDom5,248 netRn6,250 transMapEnsemblV5,401 transMapEnsemblV5,411 transMapEnsemblV5,478 transMapEstV5,370 transMapEstV5,380 transMapEstV5,447 transMapRefSeqV5,370 transMapRefSeqV5,380 transMapRefSeqV5,447 transMapRnaV5,370 transMapRnaV5,380 transMapRnaV5,447 transMapV5,476 transMapV5,486 transMapV5,553 uniprot,554 uniprot,767 uniprot,1417 locations gap,3 transMapEnsemblV5,490 transMapEstV5,459 transMapRefSeqV5,459 transMapRnaV5,459 transMapV5,565 uniprot,451 locus HLTOGAannotvHg38v1,123 log-likelihood geneid,111 logic est,287 intronEst,368 mrna,233 xenoMrna,308 long est,674 intronEst,755 refSeqComposite,1023 rmsk,161 rmsk,166 long-established transMapEnsemblV5,802 transMapEstV5,771 transMapRefSeqV5,771 transMapRnaV5,771 transMapV5,877 longer chainCavPor3,84 chainHg19,81 chainMm10,81 chainMm39,81 chainMonDom5,81 chainNetCavPor3,87 chainNetHg19,83 chainNetMm10,83 chainNetMm39,84 chainNetMonDom5,84 chainNetRn6,86 chainRn6,83 netCavPor3,84 netHg19,81 netMm10,81 netMm39,81 netMonDom5,81 netRn6,83 tRNAs,192 longest chainCavPor3,518 chainHg19,511 chainMm10,511 chainMm39,511 chainMonDom5,511 chainNetCavPor3,521 chainNetHg19,513 chainNetMm10,513 chainNetMm39,514 chainNetMonDom5,514 chainNetRn6,517 chainRn6,514 netCavPor3,518 netHg19,511 netMm10,511 netMm39,511 netMonDom5,511 netRn6,514 look chainCavPor3,48 chainHg19,46 chainMm10,46 chainMm39,46 chainMonDom5,46 chainNetCavPor3,51 chainNetHg19,48 chainNetMm10,48 chainNetMm39,49 chainNetMonDom5,49 chainNetRn6,50 chainRn6,47 netCavPor3,48 netHg19,46 netMm10,46 netMm39,46 netMonDom5,46 netRn6,47 loss HLTOGAannotvHg38v1,236 tRNAs,231 losses transMapEnsemblV5,800 transMapEstV5,769 transMapRefSeqV5,769 transMapRnaV5,769 transMapV5,875 lost HLTOGAannotvHg38v1,40 HLTOGAannotvHg38v1,260 HLTOGAannotvHg38v1,272 lot uniprot,1950 low nestedRepeats,39 rmsk,29 rmsk,181 tRNAs,293 lowe tRNAs,337 tRNAs,368 tRNAs,440 transMapEnsemblV5,790 transMapEstV5,759 transMapRefSeqV5,759 transMapRnaV5,759 transMapV5,865 lower chainCavPor3,494 chainHg19,487 chainMm10,487 chainMm39,487 chainMonDom5,487 chainNetCavPor3,497 chainNetHg19,489 chainNetMm10,489 chainNetMm39,490 chainNetMonDom5,490 chainNetRn6,493 chainRn6,490 netCavPor3,494 netHg19,487 netMm10,487 netMm39,487 netMonDom5,487 netRn6,490 lower-level chainCavPor3,859 chainCavPor3,865 chainHg19,850 chainHg19,856 chainMm10,850 chainMm10,856 chainMm39,850 chainMm39,856 chainMonDom5,850 chainMonDom5,856 chainNetCavPor3,862 chainNetCavPor3,868 chainNetHg19,852 chainNetHg19,858 chainNetMm10,852 chainNetMm10,858 chainNetMm39,853 chainNetMm39,859 chainNetMonDom5,853 chainNetMonDom5,859 chainNetRn6,856 chainNetRn6,862 chainRn6,853 chainRn6,859 netCavPor3,859 netCavPor3,865 netHg19,850 netHg19,856 netMm10,850 netMm10,856 netMm39,850 netMm39,856 netMonDom5,850 netMonDom5,856 netRn6,853 netRn6,859 ls-snp uniprot,1536 lt HLTOGAannotvHg38v1,213 refSeqComposite,940 ltr rmsk,170 m HLTOGAannotvHg38v1,345 augustusGene,287 augustusGene,289 augustusGene,317 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 est,746 intronEst,830 mrna,463 transMapEnsemblV5,714 transMapEnsemblV5,721 transMapEnsemblV5,755 transMapEnsemblV5,757 transMapEnsemblV5,789 transMapEstV5,683 transMapEstV5,690 transMapEstV5,724 transMapEstV5,726 transMapEstV5,758 transMapRefSeqV5,683 transMapRefSeqV5,690 transMapRefSeqV5,724 transMapRefSeqV5,726 transMapRefSeqV5,758 transMapRnaV5,683 transMapRnaV5,690 transMapRnaV5,724 transMapRnaV5,726 transMapRnaV5,758 transMapV5,789 transMapV5,796 transMapV5,830 transMapV5,832 transMapV5,864 xenoMrna,538 machine HLTOGAannotvHg38v1,88 made rmsk,110 transMapEnsemblV5,393 transMapEstV5,362 transMapRefSeqV5,362 transMapRnaV5,362 transMapV5,468 uniprot,931 uniprot,938 maglott refGene,404 refSeqComposite,1791 xenoRefGene,363 mailing refSeqComposite,1685 uniprot,1830 main unipAliSwissprot,12 uniprot,156 uniprot,1548 maintained tRNAs,334 uniprot,719 make blastHg18KG,66 est,446 est,512 gold,65 intronEst,527 intronEst,593 refGene,56 refSeqComposite,115 refSeqComposite,1095 rmsk,123 tRNAs,252 transMapEnsemblV5,427 transMapEstV5,396 transMapRefSeqV5,396 transMapRnaV5,396 transMapV5,502 uniprot,1406 makedb rmsk,131 making tRNAs,356 uniprot,1978 mammalian nestedRepeats,368 nestedRepeats,382 refGene,384 refSeqComposite,1771 rmsk,391 rmsk,405 xenoRefGene,343 mammals HLTOGAannotvHg38v1,56 manner refSeqComposite,1622 uniprot,1469 manual refSeqComposite,257 uniprot,1652 manually refSeqComposite,249 refSeqComposite,420 many chainCavPor3,404 chainHg19,397 chainMm10,397 chainMm39,397 chainMonDom5,397 chainNetCavPor3,407 chainNetHg19,399 chainNetMm10,399 chainNetMm39,400 chainNetMonDom5,400 chainNetRn6,403 chainRn6,400 est,144 intronEst,110 intronEst,225 mrna,90 netCavPor3,404 netHg19,397 netMm10,397 netMm39,397 netMonDom5,397 netRn6,400 uniprot,932 uniprot,1124 xenoMrna,165 map chainCavPor3,332 chainHg19,325 chainMm10,325 chainMm39,325 chainMonDom5,325 chainNetCavPor3,335 chainNetHg19,327 chainNetMm10,327 chainNetMm39,328 chainNetMonDom5,328 chainNetRn6,331 chainRn6,328 gap,144 netCavPor3,332 netHg19,325 netMm10,325 netMm39,325 netMonDom5,325 netRn6,328 transMapEnsemblV5,292 transMapEstV5,261 transMapRefSeqV5,261 transMapRnaV5,261 transMapV5,367 uniprot,758 uniprot,1885 mapped augustusGene,298 blastHg18KG,5 nestedRepeats,233 refSeqComposite,1104 transMapEnsemblV5,378 transMapEnsemblV5,410 transMapEnsemblV5,468 transMapEnsemblV5,766 transMapEstV5,347 transMapEstV5,379 transMapEstV5,437 transMapEstV5,735 transMapRefSeqV5,347 transMapRefSeqV5,379 transMapRefSeqV5,437 transMapRefSeqV5,735 transMapRnaV5,347 transMapRnaV5,379 transMapRnaV5,437 transMapRnaV5,735 transMapV5,130 transMapV5,453 transMapV5,485 transMapV5,543 transMapV5,841 uniprot,26 uniprot,97 uniprot,117 uniprot,132 uniprot,200 uniprot,213 uniprot,632 uniprot,1517 mapping ctgPos2,4 cytoBandIdeo,7 gap,4 gc5Base,8 gold,5 quality,7 refSeqComposite,319 transMapEnsemblV5,265 transMapEnsemblV5,285 transMapEnsemblV5,298 transMapEstV5,234 transMapEstV5,254 transMapEstV5,267 transMapRefSeqV5,234 transMapRefSeqV5,254 transMapRefSeqV5,267 transMapRnaV5,234 transMapRnaV5,254 transMapRnaV5,267 transMapV5,340 transMapV5,360 transMapV5,373 ucscToINSDC,10 uniprot,725 uniprot,752 uniprot,775 uniprot,904 uniprot,1213 uniprot,1322 uniprot,1613 uniprot,1853 mappings transMapEnsemblV5,7 transMapEnsemblV5,500 transMapEstV5,5 transMapEstV5,469 transMapRefSeqV5,6 transMapRefSeqV5,469 transMapRnaV5,6 transMapRnaV5,469 transMapV5,575 uniprot,1362 maps transMapEnsemblV5,474 transMapEnsemblV5,487 transMapEstV5,443 transMapEstV5,456 transMapRefSeqV5,443 transMapRefSeqV5,456 transMapRnaV5,443 transMapRnaV5,456 transMapV5,71 transMapV5,549 transMapV5,562 mar augustusGene,309 tRNAs,461 transMapEnsemblV5,777 transMapEstV5,746 transMapRefSeqV5,746 transMapRnaV5,746 transMapV5,852 mario augustusGene,102 augustusGene,283 mark est,533 intronEst,614 transMapEnsemblV5,679 transMapEstV5,648 transMapRefSeqV5,648 transMapRnaV5,648 transMapV5,754 uniprot,1539 uniprot,1956 marked gap,173 refSeqComposite,521 tRNAs,287 markers microsat,23 markov augustusGene,325 geneid,115 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainCavPor3,258 chainCavPor3,519 chainCavPor3,557 chainHg19,253 chainHg19,512 chainHg19,550 chainMm10,253 chainMm10,512 chainMm10,550 chainMm39,253 chainMm39,512 chainMm39,550 chainMonDom5,253 chainMonDom5,512 chainMonDom5,550 chainNetCavPor3,261 chainNetCavPor3,522 chainNetCavPor3,560 chainNetHg19,255 chainNetHg19,514 chainNetHg19,552 chainNetMm10,255 chainNetMm10,514 chainNetMm10,552 chainNetMm39,256 chainNetMm39,515 chainNetMm39,553 chainNetMonDom5,256 chainNetMonDom5,515 chainNetMonDom5,553 chainNetRn6,258 chainNetRn6,518 chainNetRn6,556 chainRn6,255 chainRn6,515 chainRn6,553 est,81 est,297 est,312 est,353 est,371 intronEst,162 intronEst,378 intronEst,393 intronEst,434 intronEst,452 mrna,243 mrna,258 mrna,299 mrna,317 netCavPor3,258 netCavPor3,519 netCavPor3,557 netHg19,253 netHg19,512 netHg19,550 netMm10,253 netMm10,512 netMm10,550 netMm39,253 netMm39,512 netMm39,550 netMonDom5,253 netMonDom5,512 netMonDom5,550 netRn6,255 netRn6,515 netRn6,553 refSeqComposite,908 refSeqComposite,922 uniprot,1305 uniprot,1341 xenoMrna,83 xenoMrna,318 xenoMrna,333 xenoMrna,374 xenoMrna,392 matched blastHg18KG,124 matches est,69 mrna,50 xenoMrna,55 matching chainCavPor3,261 chainHg19,256 chainMm10,256 chainMm39,256 chainMonDom5,256 chainNetCavPor3,264 chainNetHg19,258 chainNetMm10,258 chainNetMm39,259 chainNetMonDom5,259 chainNetRn6,261 chainRn6,258 est,87 intronEst,168 netCavPor3,261 netHg19,256 netMm10,256 netMm39,256 netMonDom5,256 netRn6,258 uniprot,1068 uniprot,1075 xenoMrna,98 matrix chainCavPor3,672 chainCavPor3,704 chainHg19,663 chainHg19,695 chainMm10,663 chainMm10,695 chainMm39,663 chainMm39,695 chainMonDom5,663 chainMonDom5,695 chainNetCavPor3,675 chainNetCavPor3,707 chainNetHg19,665 chainNetHg19,697 chainNetMm10,665 chainNetMm10,697 chainNetMm39,666 chainNetMm39,698 chainNetMonDom5,666 chainNetMonDom5,698 chainNetRn6,669 chainNetRn6,701 chainRn6,666 chainRn6,698 netCavPor3,672 netCavPor3,704 netHg19,663 netHg19,695 netMm10,663 netMm10,695 netMm39,663 netMm39,695 netMonDom5,663 netMonDom5,695 netRn6,666 netRn6,698 tRNAs,494 mature est,503 intronEst,584 unipChain,3 uniprot,251 uniprot,292 maximally chainCavPor3,664 chainHg19,655 chainMm10,655 chainMm39,655 chainMonDom5,655 chainNetCavPor3,667 chainNetHg19,657 chainNetMm10,657 chainNetMm39,658 chainNetMonDom5,658 chainNetRn6,661 chainRn6,658 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netCavPor3,664 netHg19,655 netMm10,655 netMm39,655 netMonDom5,655 netRn6,658 maximilian uniprot,1944 maximizing geneid,132 maximum blastHg18KG,91 est,657 intronEst,738 maxtracks augustusGene,139 may HLTOGAannotvHg38v1,189 HLTOGAannotvHg38v1,263 HLTOGAannotvHg38v1,265 chainCavPor3,176 chainCavPor3,433 chainHg19,171 chainHg19,426 chainMm10,171 chainMm10,426 chainMm39,171 chainMm39,426 chainMonDom5,171 chainMonDom5,426 chainNetCavPor3,179 chainNetCavPor3,436 chainNetHg19,173 chainNetHg19,428 chainNetMm10,173 chainNetMm10,428 chainNetMm39,174 chainNetMm39,429 chainNetMonDom5,174 chainNetMonDom5,429 chainNetRn6,176 chainNetRn6,432 chainRn6,173 chainRn6,429 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 est,140 est,259 est,269 est,377 est,428 est,508 est,510 est,522 est,524 est,544 est,668 gc5Base,40 intronEst,221 intronEst,340 intronEst,350 intronEst,458 intronEst,509 intronEst,589 intronEst,591 intronEst,603 intronEst,605 intronEst,625 intronEst,749 mrna,86 mrna,205 mrna,215 mrna,323 mrna,367 nestedRepeats,268 nestedRepeats,290 netCavPor3,176 netCavPor3,433 netHg19,171 netHg19,426 netMm10,171 netMm10,426 netMm39,171 netMm39,426 netMonDom5,171 netMonDom5,426 netRn6,173 netRn6,429 quality,55 refSeqComposite,59 refSeqComposite,659 rmsk,297 rmsk,307 simpleRepeat,43 tRNAs,210 tRNAs,212 tRNAs,325 transMapEnsemblV5,107 transMapEnsemblV5,142 transMapEstV5,76 transMapEstV5,111 transMapRefSeqV5,76 transMapRefSeqV5,111 transMapRnaV5,76 transMapRnaV5,111 transMapV5,182 transMapV5,217 uniprot,2046 xenoMrna,161 xenoMrna,280 xenoMrna,290 xenoMrna,398 xenoMrna,442 mcgarvey refGene,376 refSeqComposite,1763 xenoRefGene,335 md5 uniprot,1601 mdash est,482 est,486 intronEst,563 intronEst,567 mean tRNAs,117 mediating uniprot,314 medium chainCavPor3,709 chainHg19,700 chainMm10,700 chainMm39,700 chainMonDom5,700 chainNetCavPor3,712 chainNetHg19,702 chainNetMm10,702 chainNetMm39,703 chainNetMonDom5,703 chainNetRn6,706 chainRn6,703 netCavPor3,709 netHg19,700 netMm10,700 netMm39,700 netMonDom5,700 netRn6,703 refGene,111 refSeqComposite,618 xenoRefGene,71 mellifera augustusGene,216 mementos nestedRepeats,377 rmsk,400 menu refGene,212 refSeqComposite,846 xenoRefGene,172 method HLTOGAannotvHg38v1,27 ensGene,120 uniprot,726 uniprot,753 uniprot,776 methods HLTOGAannotvHg38v1,41 augustusGene,46 blastHg18KG,35 chainCavPor3,569 chainCavPor3,772 chainHg19,562 chainHg19,763 chainMm10,562 chainMm10,763 chainMm39,562 chainMm39,763 chainMonDom5,562 chainMonDom5,763 chainNetCavPor3,572 chainNetCavPor3,775 chainNetHg19,564 chainNetHg19,765 chainNetMm10,564 chainNetMm10,765 chainNetMm39,565 chainNetMm39,766 chainNetMonDom5,565 chainNetMonDom5,766 chainNetRn6,568 chainNetRn6,769 chainRn6,565 chainRn6,766 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 ensGene,29 ensGene,35 est,444 geneid,49 genscan,130 genscan,197 intronEst,525 microsat,45 mrna,383 nestedRepeats,244 netCavPor3,569 netCavPor3,772 netHg19,562 netHg19,763 netMm10,562 netMm10,763 netMm39,562 netMm39,763 netMonDom5,562 netMonDom5,763 netRn6,565 netRn6,766 refGene,255 refSeqComposite,90 refSeqComposite,1136 refSeqComposite,1218 rmsk,286 simpleRepeat,55 transMapEnsemblV5,151 transMapEstV5,120 transMapRefSeqV5,120 transMapRnaV5,120 transMapV5,226 uniprot,777 xenoMrna,458 xenoRefGene,215 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 mica geneid,43 michael HLTOGAannotvHg38v1,321 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 middle HLTOGAannotvHg38v1,144 HLTOGAannotvHg38v1,178 HLTOGAannotvHg38v1,225 HLTOGAannotvHg38v1,244 might est,105 est,677 intronEst,186 intronEst,758 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller blastHg18KG,157 chainCavPor3,937 chainCavPor3,974 chainCavPor3,1035 chainCavPor3,1055 chainCavPor3,1103 chainHg19,928 chainHg19,965 chainHg19,1026 chainHg19,1046 chainHg19,1094 chainMm10,928 chainMm10,965 chainMm10,1026 chainMm10,1046 chainMm10,1094 chainMm39,928 chainMm39,965 chainMm39,1026 chainMm39,1046 chainMm39,1094 chainMonDom5,928 chainMonDom5,965 chainMonDom5,1026 chainMonDom5,1046 chainMonDom5,1094 chainNetCavPor3,940 chainNetCavPor3,977 chainNetCavPor3,1038 chainNetCavPor3,1058 chainNetCavPor3,1106 chainNetHg19,930 chainNetHg19,967 chainNetHg19,1028 chainNetHg19,1048 chainNetHg19,1096 chainNetMm10,930 chainNetMm10,967 chainNetMm10,1028 chainNetMm10,1048 chainNetMm10,1096 chainNetMm39,931 chainNetMm39,968 chainNetMm39,1029 chainNetMm39,1049 chainNetMm39,1097 chainNetMonDom5,931 chainNetMonDom5,968 chainNetMonDom5,1029 chainNetMonDom5,1049 chainNetMonDom5,1097 chainNetRn6,934 chainNetRn6,971 chainNetRn6,1032 chainNetRn6,1052 chainNetRn6,1100 chainRn6,931 chainRn6,968 chainRn6,1029 chainRn6,1049 chainRn6,1097 netCavPor3,937 netCavPor3,974 netCavPor3,1035 netCavPor3,1055 netCavPor3,1103 netHg19,928 netHg19,965 netHg19,1026 netHg19,1046 netHg19,1094 netMm10,928 netMm10,965 netMm10,1026 netMm10,1046 netMm10,1094 netMm39,928 netMm39,965 netMm39,1026 netMm39,1046 netMm39,1094 netMonDom5,928 netMonDom5,965 netMonDom5,1026 netMonDom5,1046 netMonDom5,1094 netRn6,931 netRn6,968 netRn6,1029 netRn6,1049 netRn6,1097 minexonintronprob augustusGene,135 minimum chainCavPor3,685 chainHg19,676 chainMm10,676 chainMm39,676 chainMonDom5,676 chainNetCavPor3,688 chainNetHg19,678 chainNetMm10,678 chainNetMm39,679 chainNetMonDom5,679 chainNetRn6,682 chainRn6,679 netCavPor3,685 netHg19,676 netMm10,676 netMm39,676 netMonDom5,676 netRn6,679 minmeanexonintronprob augustusGene,137 minmei chainCavPor3,929 chainHg19,920 chainMm10,920 chainMm39,920 chainMonDom5,920 chainNetCavPor3,932 chainNetHg19,922 chainNetMm10,922 chainNetMm39,923 chainNetMonDom5,923 chainNetRn6,926 chainRn6,923 netCavPor3,929 netHg19,920 netMm10,920 netMm39,920 netMonDom5,920 netRn6,923 mismatch refSeqComposite,892 rmsk,218 mismatching refSeqComposite,896 misplacements uniprot,853 missing HLTOGAannotvHg38v1,205 HLTOGAannotvHg38v1,212 mitochondrial gold,142 mitochondrion refSeqComposite,240 mj refGene,375 refSeqComposite,1762 xenoRefGene,334 mm10 chainMm10,7 chainMm10,69 chainMm10,303 chainNetMm10,1 chainNetMm10,7 chainNetMm10,71 chainNetMm10,305 chainNetMm10Viewchain,6 chainNetMm10Viewnet,6 netMm10,7 netMm10,69 netMm10,303 mm39 chainMm39,7 chainMm39,69 chainMm39,303 chainNetMm39,8 chainNetMm39,72 chainNetMm39,306 chainNetMm39Viewchain,6 chainNetMm39Viewnet,6 netMm39,7 netMm39,69 netMm39,303 mode chainCavPor3,388 chainHg19,381 chainMm10,381 chainMm39,381 chainMonDom5,381 chainNetCavPor3,391 chainNetHg19,383 chainNetMm10,383 chainNetMm39,384 chainNetMonDom5,384 chainNetRn6,387 chainRn6,384 est,60 est,125 gold,58 intronEst,144 intronEst,206 mrna,41 mrna,71 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netCavPor3,388 netHg19,381 netMm10,381 netMm39,381 netMonDom5,381 netRn6,384 rmsk,142 xenoMrna,46 xenoMrna,146 model augustusGene,121 augustusGene,326 geneid,116 genscan,140 model-based tRNAs,61 modeling genscan,182 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 genscan,158 tRNAs,403 uniprot,733 modes chainCavPor3,243 chainHg19,238 chainMm10,238 chainMm39,238 chainMonDom5,238 chainNetCavPor3,246 chainNetHg19,240 chainNetMm10,240 chainNetMm39,241 chainNetMonDom5,241 chainNetRn6,243 chainRn6,240 netCavPor3,243 netHg19,238 netMm10,238 netMm39,238 netMonDom5,238 netRn6,240 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modifications unipModif,2 unipModif,6 uniprot,340 uniprot,574 modified rmsk,57 uniprot,343 modsnp uniprot,2030 moiety-binding uniprot,347 mol blastHg18KG,169 cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,221 tRNAs,430 molecular genscan,199 molecule tRNAs,147 mondom5 chainMonDom5,7 chainMonDom5,69 chainMonDom5,303 chainNetMonDom5,8 chainNetMonDom5,72 chainNetMonDom5,306 chainNetMonDom5Viewchain,6 chainNetMonDom5Viewnet,6 netMonDom5,7 netMonDom5,69 netMonDom5,303 months uniprot,1573 morales HLTOGAannotvHg38v1,346 more augustusGene,35 blastHg18KG,105 blastHg18KG,148 chainCavPor3,165 chainCavPor3,225 chainHg19,160 chainHg19,220 chainMm10,160 chainMm10,220 chainMm39,160 chainMm39,220 chainMonDom5,160 chainMonDom5,220 chainNetCavPor3,168 chainNetCavPor3,228 chainNetHg19,162 chainNetHg19,222 chainNetMm10,162 chainNetMm10,222 chainNetMm39,163 chainNetMm39,223 chainNetMonDom5,163 chainNetMonDom5,223 chainNetRn6,165 chainNetRn6,225 chainRn6,162 chainRn6,222 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 ensGene,18 ensGene,158 est,65 est,172 est,279 est,409 est,433 genscan,50 genscan,125 genscan,163 intronEst,253 intronEst,360 intronEst,490 intronEst,514 microsat,96 mrna,46 mrna,118 mrna,225 mrna,346 mrna,372 nestedRepeats,211 nestedRepeats,300 netCavPor3,165 netCavPor3,225 netHg19,160 netHg19,220 netMm10,160 netMm10,220 netMm39,160 netMm39,220 netMonDom5,160 netMonDom5,220 netRn6,162 netRn6,222 refGene,70 refGene,214 refSeqComposite,93 refSeqComposite,129 refSeqComposite,848 refSeqComposite,1378 refSeqComposite,1458 rmsk,323 simpleRepeat,57 transMapEnsemblV5,130 transMapEnsemblV5,147 transMapEnsemblV5,222 transMapEnsemblV5,267 transMapEnsemblV5,289 transMapEnsemblV5,565 transMapEstV5,99 transMapEstV5,116 transMapEstV5,191 transMapEstV5,236 transMapEstV5,258 transMapEstV5,534 transMapRefSeqV5,99 transMapRefSeqV5,116 transMapRefSeqV5,191 transMapRefSeqV5,236 transMapRefSeqV5,258 transMapRefSeqV5,534 transMapRnaV5,99 transMapRnaV5,116 transMapRnaV5,191 transMapRnaV5,236 transMapRnaV5,258 transMapRnaV5,534 transMapV5,62 transMapV5,106 transMapV5,163 transMapV5,205 transMapV5,222 transMapV5,297 transMapV5,342 transMapV5,364 transMapV5,640 uniprot,498 uniprot,691 uniprot,984 uniprot,1841 xenoMrna,51 xenoMrna,193 xenoMrna,300 xenoMrna,421 xenoMrna,447 xenoRefGene,174 most augustusGene,93 augustusGene,110 est,481 intronEst,562 nestedRepeats,249 refSeqComposite,576 refSeqComposite,943 transMapV5,92 uniprot,683 uniprot,756 uniprot,1295 uniprot,1391 mostly tRNAs,298 uniprot,1365 motif tRNAs,38 motifs uniprot,388 mouse chainCavPor3,1068 chainHg19,1059 chainMm10,1 chainMm10,3 chainMm10,65 chainMm10,96 chainMm10,148 chainMm10,266 chainMm10,291 chainMm10,572 chainMm10,620 chainMm10,1059 chainMm39,1 chainMm39,3 chainMm39,65 chainMm39,96 chainMm39,148 chainMm39,266 chainMm39,291 chainMm39,572 chainMm39,620 chainMm39,1059 chainMonDom5,1059 chainNetCavPor3,1071 chainNetHg19,1061 chainNetMm10,3 chainNetMm10,67 chainNetMm10,98 chainNetMm10,150 chainNetMm10,268 chainNetMm10,293 chainNetMm10,574 chainNetMm10,622 chainNetMm10,1061 chainNetMm10Viewchain,2 chainNetMm10Viewnet,2 chainNetMm39,1 chainNetMm39,4 chainNetMm39,68 chainNetMm39,99 chainNetMm39,151 chainNetMm39,269 chainNetMm39,294 chainNetMm39,575 chainNetMm39,623 chainNetMm39,1062 chainNetMm39Viewchain,2 chainNetMm39Viewnet,2 chainNetMonDom5,1062 chainNetRn6,1065 chainRn6,1062 netCavPor3,1068 netHg19,1059 netMm10,1 netMm10,3 netMm10,65 netMm10,96 netMm10,148 netMm10,266 netMm10,291 netMm10,572 netMm10,620 netMm10,1059 netMm39,1 netMm39,3 netMm39,65 netMm39,96 netMm39,148 netMm39,266 netMm39,291 netMm39,572 netMm39,620 netMm39,1059 netMonDom5,1059 netRn6,1062 transMapEnsemblV5,44 transMapEnsemblV5,364 transMapEstV5,333 transMapRefSeqV5,333 transMapRnaV5,333 transMapV5,439 uniprot,521 uniprot,535 mrna est,7 est,504 est,520 est,603 intronEst,9 intronEst,585 intronEst,601 intronEst,684 mrna,7 mrna,12 mrna,126 mrna,399 mrna,439 mrna,446 transMapEnsemblV5,455 transMapEstV5,424 transMapRefSeqV5,424 transMapRnaV5,18 transMapRnaV5,424 transMapV5,99 transMapV5,530 xenoMrna,7 xenoMrna,21 xenoMrna,201 xenoMrna,473 xenoMrna,514 xenoMrna,521 mrnas mrna,2 mrna,4 mrna,18 mrna,136 mrna,241 mrna,256 mrna,297 mrna,315 mrna,340 mrna,386 transMapEnsemblV5,172 transMapEstV5,141 transMapRefSeqV5,141 transMapRnaV5,141 transMapV5,110 transMapV5,247 xenoMrna,2 xenoMrna,4 xenoMrna,211 xenoMrna,316 xenoMrna,331 xenoMrna,372 xenoMrna,390 xenoMrna,415 xenoMrna,460 much chainCavPor3,886 chainCavPor3,903 chainHg19,877 chainHg19,894 chainMm10,877 chainMm10,894 chainMm39,877 chainMm39,894 chainMonDom5,877 chainMonDom5,894 chainNetCavPor3,889 chainNetCavPor3,906 chainNetHg19,879 chainNetHg19,896 chainNetMm10,879 chainNetMm10,896 chainNetMm39,880 chainNetMm39,897 chainNetMonDom5,880 chainNetMonDom5,897 chainNetRn6,883 chainNetRn6,900 chainRn6,880 chainRn6,897 nestedRepeats,210 netCavPor3,886 netCavPor3,903 netHg19,877 netHg19,894 netMm10,877 netMm10,894 netMm39,877 netMm39,894 netMonDom5,877 netMonDom5,894 netRn6,880 netRn6,897 mujica uniprot,1967 multiple chainCavPor3,197 chainHg19,192 chainMm10,192 chainMm39,192 chainMonDom5,192 chainNetCavPor3,200 chainNetHg19,194 chainNetMm10,194 chainNetMm39,195 chainNetMonDom5,195 chainNetRn6,197 chainRn6,194 est,257 est,686 intronEst,338 intronEst,767 mrna,203 mrna,402 netCavPor3,197 netHg19,192 netMm10,192 netMm39,192 netMonDom5,192 netRn6,194 refGene,282 refSeqComposite,1250 refSeqComposite,1297 transMapEnsemblV5,498 transMapEstV5,467 transMapRefSeqV5,467 transMapRnaV5,467 transMapV5,573 uniprot,58 uniprot,1067 uniprot,1095 xenoMrna,278 xenoMrna,476 xenoRefGene,242 multistep tRNAs,492 munegowda HLTOGAannotvHg38v1,336 must intronEst,61 intronEst,78 refSeqComposite,302 refSeqComposite,1631 mutagenesis uniprot,353 mutat uniprot,2044 mutated uniprot,618 mutation HLTOGAannotvHg38v1,157 HLTOGAannotvHg38v1,186 HLTOGAannotvHg38v1,233 HLTOGAannotvHg38v1,241 chainCavPor3,186 chainHg19,181 chainMm10,181 chainMm39,181 chainMonDom5,181 chainNetCavPor3,189 chainNetHg19,183 chainNetMm10,183 chainNetMm39,184 chainNetMonDom5,184 chainNetRn6,186 chainRn6,183 netCavPor3,186 netHg19,181 netMm10,181 netMm39,181 netMonDom5,181 netRn6,183 refSeqComposite,559 mutation-related uniprot,408 mutations HLTOGAannotvHg38v1,276 HLTOGAannotvHg38v1,306 unipMut,1 unipMut,5 uniprot,352 myers blastHg18KG,159 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 ensGene,115 ensGene,125 refSeqComposite,1323 refSeqComposite,1626 refSeqComposite,1640 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 refSeqComposite,914 refSeqComposite,955 refSeqComposite,982 refSeqComposite,1041 refSeqComposite,1068 refSeqComposite,1083 n50 ctgPos2,50 name chainCavPor3,370 chainHg19,363 chainMm10,363 chainMm39,363 chainMonDom5,363 chainNetCavPor3,373 chainNetHg19,365 chainNetMm10,365 chainNetMm39,366 chainNetMonDom5,366 chainNetRn6,369 chainRn6,366 est,198 intronEst,279 mrna,144 nestedRepeats,136 netCavPor3,370 netHg19,363 netMm10,363 netMm39,363 netMonDom5,363 netRn6,366 refGene,147 refGene,157 refGene,162 refSeqComposite,755 refSeqComposite,768 refSeqComposite,778 refSeqComposite,786 refSeqComposite,798 uniprot,105 uniprot,461 uniprot,541 uniprot,1577 xenoMrna,219 xenoRefGene,107 xenoRefGene,117 xenoRefGene,122 names chainCavPor3,247 chainHg19,242 chainMm10,242 chainMm39,242 chainMonDom5,242 chainNetCavPor3,250 chainNetHg19,244 chainNetMm10,244 chainNetMm39,245 chainNetMonDom5,245 chainNetRn6,247 chainRn6,244 netCavPor3,247 netHg19,242 netMm10,242 netMm39,242 netMonDom5,242 netRn6,244 refGene,169 refSeqComposite,803 ucscToINSDC,21 ucscToINSDC,24 xenoRefGene,129 native augustusGene,295 transMapEnsemblV5,763 transMapEstV5,732 transMapRefSeqV5,732 transMapRnaV5,732 transMapV5,122 transMapV5,838 natl chainCavPor3,1073 chainHg19,1064 chainMm10,1064 chainMm39,1064 chainMonDom5,1064 chainNetCavPor3,1076 chainNetHg19,1066 chainNetMm10,1066 chainNetMm39,1067 chainNetMonDom5,1067 chainNetRn6,1070 chainRn6,1067 netCavPor3,1073 netHg19,1064 netMm10,1064 netMm39,1064 netMonDom5,1064 netRn6,1067 natural chainCavPor3,824 chainHg19,815 chainMm10,815 chainMm39,815 chainMonDom5,815 chainNetCavPor3,827 chainNetHg19,817 chainNetMm10,817 chainNetMm39,818 chainNetMonDom5,818 chainNetRn6,821 chainRn6,818 netCavPor3,824 netHg19,815 netMm10,815 netMm39,815 netMonDom5,815 netRn6,818 naview tRNAs,348 nbci uniprot,822 nbsp HLTOGAannotvHg38v1,142 HLTOGAannotvHg38v1,164 HLTOGAannotvHg38v1,211 HLTOGAannotvHg38v1,234 HLTOGAannotvHg38v1,271 chainCavPor3,675 chainHg19,666 chainMm10,666 chainMm39,666 chainMonDom5,666 chainNetCavPor3,678 chainNetHg19,668 chainNetMm10,668 chainNetMm39,669 chainNetMonDom5,669 chainNetRn6,672 chainRn6,669 netCavPor3,675 netHg19,666 netMm10,666 netMm39,666 netMonDom5,666 netRn6,669 nc_001913 gold,146 ncbi blastHg18KG,143 ncbiRefSeq,3 ncbiRefSeqCurated,3 ncbiRefSeqGenomicDiff,5 ncbiRefSeqOther,3 ncbiRefSeqPredicted,3 refGene,30 refGene,336 refGene,406 refSeqComposite,1 refSeqComposite,6 refSeqComposite,13 refSeqComposite,27 refSeqComposite,72 refSeqComposite,79 refSeqComposite,104 refSeqComposite,317 refSeqComposite,373 refSeqComposite,542 refSeqComposite,638 refSeqComposite,645 refSeqComposite,689 refSeqComposite,1156 refSeqComposite,1187 refSeqComposite,1203 refSeqComposite,1723 refSeqComposite,1793 ucscToINSDC,39 uniprot,840 uniprot,856 uniprot,1024 uniprot,1046 uniprot,1049 uniprot,1079 uniprot,1204 uniprot,1274 uniprot,1280 uniprot,1289 uniprot,1299 xenoRefGene,27 xenoRefGene,296 xenoRefGene,365 ncbirefseq refSeqComposite,1406 refSeqComposite,1550 refSeqComposite,1694 ncbirefseqcurated refSeqComposite,1409 ncbirefseqdiffs.bb refSeqComposite,1489 ncbirefseqother.bb refSeqComposite,1487 refSeqComposite,1551 ncbirefseqpredicted refSeqComposite,1412 refSeqComposite,1614 ncbirefseqpredicted.gtf refSeqComposite,1615 ncbirefseqpsl refSeqComposite,1420 ndash refSeqComposite,199 refSeqComposite,210 refSeqComposite,340 refSeqComposite,379 refSeqComposite,434 refSeqComposite,457 refSeqComposite,479 refSeqComposite,515 refSeqComposite,548 refSeqComposite,893 refSeqComposite,927 refSeqComposite,960 refSeqComposite,1018 refSeqComposite,1044 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 refSeqComposite,1643 near-best transMapEnsemblV5,355 transMapEstV5,324 transMapRefSeqV5,324 transMapRnaV5,324 transMapV5,430 necessary chainCavPor3,808 chainHg19,799 chainMm10,799 chainMm39,799 chainMonDom5,799 chainNetCavPor3,811 chainNetHg19,801 chainNetMm10,801 chainNetMm39,802 chainNetMonDom5,802 chainNetRn6,805 chainRn6,802 netCavPor3,808 netHg19,799 netMm10,799 netMm39,799 netMonDom5,799 netRn6,802 nematodes augustusGene,211 net chainCavPor3,36 chainCavPor3,263 chainCavPor3,266 chainCavPor3,383 chainCavPor3,762 chainHg19,34 chainHg19,258 chainHg19,261 chainHg19,376 chainHg19,753 chainMm10,34 chainMm10,258 chainMm10,261 chainMm10,376 chainMm10,753 chainMm39,34 chainMm39,258 chainMm39,261 chainMm39,376 chainMm39,753 chainMonDom5,34 chainMonDom5,258 chainMonDom5,261 chainMonDom5,376 chainMonDom5,753 chainNetCavPor3,4 chainNetCavPor3,13 chainNetCavPor3,39 chainNetCavPor3,266 chainNetCavPor3,269 chainNetCavPor3,386 chainNetCavPor3,765 chainNetCavPor3Viewchain,10 chainNetCavPor3Viewnet,1 chainNetCavPor3Viewnet,10 chainNetHg19,10 chainNetHg19,36 chainNetHg19,260 chainNetHg19,263 chainNetHg19,378 chainNetHg19,755 chainNetHg19Viewchain,9 chainNetHg19Viewnet,1 chainNetHg19Viewnet,9 chainNetMm10,10 chainNetMm10,36 chainNetMm10,260 chainNetMm10,263 chainNetMm10,378 chainNetMm10,755 chainNetMm10Viewchain,9 chainNetMm10Viewnet,1 chainNetMm10Viewnet,9 chainNetMm39,3 chainNetMm39,11 chainNetMm39,37 chainNetMm39,261 chainNetMm39,264 chainNetMm39,379 chainNetMm39,756 chainNetMm39Viewchain,9 chainNetMm39Viewnet,1 chainNetMm39Viewnet,9 chainNetMonDom5,3 chainNetMonDom5,11 chainNetMonDom5,37 chainNetMonDom5,261 chainNetMonDom5,264 chainNetMonDom5,379 chainNetMonDom5,756 chainNetMonDom5Viewchain,9 chainNetMonDom5Viewnet,1 chainNetMonDom5Viewnet,9 chainNetRn6,3 chainNetRn6,12 chainNetRn6,38 chainNetRn6,263 chainNetRn6,266 chainNetRn6,382 chainNetRn6,759 chainNetRn6Viewchain,10 chainNetRn6Viewnet,1 chainNetRn6Viewnet,10 chainRn6,35 chainRn6,260 chainRn6,263 chainRn6,379 chainRn6,756 netCavPor3,3 netCavPor3,11 netCavPor3,36 netCavPor3,263 netCavPor3,266 netCavPor3,383 netCavPor3,762 netHg19,2 netHg19,9 netHg19,34 netHg19,258 netHg19,261 netHg19,376 netHg19,753 netMm10,2 netMm10,9 netMm10,34 netMm10,258 netMm10,261 netMm10,376 netMm10,753 netMm39,2 netMm39,9 netMm39,34 netMm39,258 netMm39,261 netMm39,376 netMm39,753 netMonDom5,2 netMonDom5,9 netMonDom5,34 netMonDom5,258 netMonDom5,261 netMonDom5,376 netMonDom5,753 netRn6,2 netRn6,10 netRn6,35 netRn6,260 netRn6,263 netRn6,379 netRn6,756 transMapV5,139 netclass chainCavPor3,878 chainCavPor3,1001 chainHg19,869 chainHg19,992 chainMm10,869 chainMm10,992 chainMm39,869 chainMm39,992 chainMonDom5,869 chainMonDom5,992 chainNetCavPor3,881 chainNetCavPor3,1004 chainNetHg19,871 chainNetHg19,994 chainNetMm10,871 chainNetMm10,994 chainNetMm39,872 chainNetMm39,995 chainNetMonDom5,872 chainNetMonDom5,995 chainNetRn6,875 chainNetRn6,998 chainRn6,872 chainRn6,995 netCavPor3,878 netCavPor3,1001 netHg19,869 netHg19,992 netMm10,869 netMm10,992 netMm39,869 netMm39,992 netMonDom5,869 netMonDom5,992 netRn6,872 netRn6,995 netfilter transMapEnsemblV5,252 transMapEstV5,221 transMapRefSeqV5,221 transMapRnaV5,221 transMapV5,327 nets chainCavPor3,988 chainHg19,979 chainMm10,979 chainMm39,979 chainMonDom5,979 chainNetCavPor3,991 chainNetHg19,981 chainNetMm10,981 chainNetMm39,982 chainNetMonDom5,982 chainNetRn6,985 chainRn6,982 netCavPor3,988 netHg19,979 netMm10,979 netMm39,979 netMonDom5,979 netRn6,982 transMapEnsemblV5,199 transMapEnsemblV5,241 transMapEnsemblV5,247 transMapEnsemblV5,261 transMapEstV5,168 transMapEstV5,210 transMapEstV5,216 transMapEstV5,230 transMapRefSeqV5,168 transMapRefSeqV5,210 transMapRefSeqV5,216 transMapRefSeqV5,230 transMapRnaV5,168 transMapRnaV5,210 transMapRnaV5,216 transMapRnaV5,230 transMapV5,88 transMapV5,274 transMapV5,316 transMapV5,322 transMapV5,336 netsyntenic chainCavPor3,846 chainCavPor3,999 chainHg19,837 chainHg19,990 chainMm10,837 chainMm10,990 chainMm39,837 chainMm39,990 chainMonDom5,837 chainMonDom5,990 chainNetCavPor3,849 chainNetCavPor3,1002 chainNetHg19,839 chainNetHg19,992 chainNetMm10,839 chainNetMm10,992 chainNetMm39,840 chainNetMm39,993 chainNetMonDom5,840 chainNetMonDom5,993 chainNetRn6,843 chainNetRn6,996 chainRn6,840 chainRn6,993 netCavPor3,846 netCavPor3,999 netHg19,837 netHg19,990 netMm10,837 netMm10,990 netMm39,837 netMm39,990 netMonDom5,837 netMonDom5,990 netRn6,840 netRn6,993 new augustusGene,329 tRNAs,482 newer est,555 intronEst,636 nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next blastHg18KG,60 chainCavPor3,349 chainCavPor3,378 chainHg19,342 chainHg19,371 chainMm10,342 chainMm10,371 chainMm39,342 chainMm39,371 chainMonDom5,342 chainMonDom5,371 chainNetCavPor3,352 chainNetCavPor3,381 chainNetHg19,344 chainNetHg19,373 chainNetMm10,344 chainNetMm10,373 chainNetMm39,345 chainNetMm39,374 chainNetMonDom5,345 chainNetMonDom5,374 chainNetRn6,348 chainNetRn6,377 chainRn6,345 chainRn6,374 geneid,88 netCavPor3,349 netCavPor3,378 netHg19,342 netHg19,371 netMm10,342 netMm10,371 netMm39,342 netMm39,371 netMonDom5,342 netMonDom5,371 netRn6,345 netRn6,374 refSeqComposite,166 refSeqComposite,751 nig augustusGene,270 nm refSeqComposite,224 refSeqComposite,489 nm_ ncbiRefSeq,9 ncbiRefSeqCurated,8 ncbiRefSeqOther,8 refGene,8 nm_012309 refSeqComposite,1135 nm_012309.4 refSeqComposite,1133 no HLTOGAannotvHg38v1,155 HLTOGAannotvHg38v1,184 HLTOGAannotvHg38v1,231 blastHg18KG,95 est,92 intronEst,173 microsat,73 tRNAs,191 transMapEnsemblV5,221 transMapEstV5,190 transMapRefSeqV5,190 transMapRnaV5,190 transMapV5,296 uniprot,1031 uniprot,1078 uniprot,1262 uniprot,1324 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainCavPor3,51 chainHg19,49 chainMm10,49 chainMm39,49 chainMonDom5,49 chainNetCavPor3,54 chainNetHg19,51 chainNetMm10,51 chainNetMm39,52 chainNetMonDom5,52 chainNetRn6,53 chainRn6,50 netCavPor3,51 netHg19,49 netMm10,49 netMm39,49 netMonDom5,49 netRn6,50 non-bridged gap,175 non-coding augustusGene,75 refGene,231 refSeqComposite,1084 xenoRefGene,191 non-mrna est,624 intronEst,705 non-protein-coding refGene,25 refGene,239 refSeqComposite,22 xenoRefGene,17 xenoRefGene,199 non-rabbit xenoMrna,3 xenoRefGene,3 non-redundant refGene,412 refSeqComposite,1799 xenoRefGene,371 nonsyn chainCavPor3,555 chainHg19,548 chainMm10,548 chainMm39,548 chainMonDom5,548 chainNetCavPor3,558 chainNetHg19,550 chainNetMm10,550 chainNetMm39,551 chainNetMonDom5,551 chainNetRn6,554 chainRn6,551 netCavPor3,555 netHg19,548 netMm10,548 netMm39,548 netMonDom5,548 netRn6,551 nor tRNAs,265 xenoMrna,124 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not HLTOGAannotvHg38v1,252 HLTOGAannotvHg38v1,266 chainCavPor3,813 chainHg19,804 chainMm10,804 chainMm39,804 chainMonDom5,804 chainNetCavPor3,816 chainNetHg19,806 chainNetMm10,806 chainNetMm39,807 chainNetMonDom5,807 chainNetRn6,810 chainRn6,807 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 est,349 est,484 est,511 est,525 intronEst,430 intronEst,565 intronEst,592 intronEst,606 mrna,295 ncbiRefSeqOther,7 netCavPor3,813 netHg19,804 netMm10,804 netMm39,804 netMonDom5,804 netRn6,807 refSeqComposite,176 refSeqComposite,390 refSeqComposite,428 refSeqComposite,471 refSeqComposite,671 refSeqComposite,696 refSeqComposite,1056 refSeqComposite,1134 rmsk,113 rmsk,313 tRNAs,136 tRNAs,153 tRNAs,213 tRNAs,263 tRNAs,306 transMapEnsemblV5,62 uniprot,169 uniprot,627 uniprot,959 uniprot,1130 uniprot,1455 xenoMrna,120 xenoMrna,370 note est,654 intronEst,735 nestedRepeats,264 refSeqComposite,175 refSeqComposite,1616 tRNAs,283 transMapEnsemblV5,496 transMapEstV5,465 transMapRefSeqV5,465 transMapRnaV5,465 transMapV5,571 uniprot,695 novel HLTOGAannotvHg38v1,75 transMapEnsemblV5,737 transMapEstV5,706 transMapRefSeqV5,706 transMapRnaV5,706 transMapV5,812 novo augustusGene,304 transMapEnsemblV5,772 transMapEstV5,741 transMapRefSeqV5,741 transMapRnaV5,741 transMapV5,847 now uniprot,1680 np refSeqComposite,226 refSeqComposite,229 np_ ncbiRefSeq,13 ncbiRefSeqCurated,10 ncbiRefSeqOther,12 nr refSeqComposite,225 refSeqComposite,491 nr_ ncbiRefSeq,11 ncbiRefSeqCurated,9 ncbiRefSeqOther,9 refGene,10 ns chainCavPor3,893 chainHg19,884 chainMm10,884 chainMm39,884 chainMonDom5,884 chainNetCavPor3,896 chainNetHg19,886 chainNetMm10,886 chainNetMm39,887 chainNetMonDom5,887 chainNetRn6,890 chainRn6,887 gap,90 gap,157 gap,182 netCavPor3,893 netHg19,884 netMm10,884 netMm39,884 netMonDom5,884 netRn6,887 nuclear rmsk,155 rmsk,163 nucleic ensGene,195 est,758 est,783 intronEst,842 intronEst,867 microsat,125 mrna,475 mrna,500 refGene,387 refGene,420 refSeqComposite,1774 refSeqComposite,1807 simpleRepeat,85 tRNAs,381 tRNAs,404 tRNAs,457 tRNAs,500 uniprot,1997 xenoMrna,550 xenoMrna,575 xenoRefGene,346 xenoRefGene,379 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 ucscToINSDC,6 ucscToINSDC,28 number augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 intronEst,150 rmsk,233 transMapEnsemblV5,424 transMapEnsemblV5,547 transMapEstV5,393 transMapEstV5,516 transMapRefSeqV5,393 transMapRefSeqV5,516 transMapRnaV5,393 transMapRnaV5,516 transMapV5,499 transMapV5,622 numbers gap,88 o refGene,369 refSeqComposite,1756 xenoRefGene,328 oacute geneid,24 geneid,40 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 uniprot,1114 obtain tRNAs,45 tRNAs,67 transMapEnsemblV5,649 transMapEstV5,618 transMapRefSeqV5,618 transMapRnaV5,618 transMapV5,724 uniprot,1803 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 refSeqComposite,1481 refSeqComposite,1501 transMapEnsemblV5,156 transMapEnsemblV5,609 transMapEstV5,125 transMapEstV5,578 transMapRefSeqV5,125 transMapRefSeqV5,578 transMapRnaV5,125 transMapRnaV5,578 transMapV5,231 transMapV5,684 uniprot,1506 uniprot,1695 occasional refSeqComposite,62 occur simpleRepeat,36 oct augustusGene,334 blastHg18KG,172 chainMonDom5,4 chainMonDom5,66 chainMonDom5,300 chainNetMonDom5,5 chainNetMonDom5,69 chainNetMonDom5,303 chainNetMonDom5Viewchain,3 chainNetMonDom5Viewnet,3 netMonDom5,4 netMonDom5,66 netMonDom5,300 of HLTOGAannotvHg38v1,49 HLTOGAannotvHg38v1,81 HLTOGAannotvHg38v1,112 HLTOGAannotvHg38v1,115 HLTOGAannotvHg38v1,146 HLTOGAannotvHg38v1,168 HLTOGAannotvHg38v1,180 HLTOGAannotvHg38v1,201 HLTOGAannotvHg38v1,215 HLTOGAannotvHg38v1,227 HLTOGAannotvHg38v1,246 augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 blastHg18KG,19 blastHg18KG,108 blastHg18KG,120 blastHg18KG,128 blastHg18KG,141 chainCavPor3,19 chainCavPor3,66 chainCavPor3,184 chainCavPor3,204 chainCavPor3,256 chainCavPor3,278 chainCavPor3,361 chainCavPor3,371 chainCavPor3,489 chainCavPor3,509 chainCavPor3,644 chainCavPor3,649 chainCavPor3,667 chainCavPor3,687 chainCavPor3,887 chainCavPor3,962 chainCavPor3,984 chainCavPor3,1008 chainCavPor3,1022 chainHg19,17 chainHg19,64 chainHg19,179 chainHg19,199 chainHg19,251 chainHg19,272 chainHg19,354 chainHg19,364 chainHg19,482 chainHg19,502 chainHg19,635 chainHg19,640 chainHg19,658 chainHg19,678 chainHg19,878 chainHg19,953 chainHg19,975 chainHg19,999 chainHg19,1013 chainMm10,17 chainMm10,64 chainMm10,179 chainMm10,199 chainMm10,251 chainMm10,272 chainMm10,354 chainMm10,364 chainMm10,482 chainMm10,502 chainMm10,635 chainMm10,640 chainMm10,658 chainMm10,678 chainMm10,878 chainMm10,953 chainMm10,975 chainMm10,999 chainMm10,1013 chainMm39,17 chainMm39,64 chainMm39,179 chainMm39,199 chainMm39,251 chainMm39,272 chainMm39,354 chainMm39,364 chainMm39,482 chainMm39,502 chainMm39,635 chainMm39,640 chainMm39,658 chainMm39,678 chainMm39,878 chainMm39,953 chainMm39,975 chainMm39,999 chainMm39,1013 chainMonDom5,17 chainMonDom5,64 chainMonDom5,179 chainMonDom5,199 chainMonDom5,251 chainMonDom5,272 chainMonDom5,354 chainMonDom5,364 chainMonDom5,482 chainMonDom5,502 chainMonDom5,635 chainMonDom5,640 chainMonDom5,658 chainMonDom5,678 chainMonDom5,878 chainMonDom5,953 chainMonDom5,975 chainMonDom5,999 chainMonDom5,1013 chainNetCavPor3,22 chainNetCavPor3,69 chainNetCavPor3,187 chainNetCavPor3,207 chainNetCavPor3,259 chainNetCavPor3,281 chainNetCavPor3,364 chainNetCavPor3,374 chainNetCavPor3,492 chainNetCavPor3,512 chainNetCavPor3,647 chainNetCavPor3,652 chainNetCavPor3,670 chainNetCavPor3,690 chainNetCavPor3,890 chainNetCavPor3,965 chainNetCavPor3,987 chainNetCavPor3,1011 chainNetCavPor3,1025 chainNetHg19,19 chainNetHg19,66 chainNetHg19,181 chainNetHg19,201 chainNetHg19,253 chainNetHg19,274 chainNetHg19,356 chainNetHg19,366 chainNetHg19,484 chainNetHg19,504 chainNetHg19,637 chainNetHg19,642 chainNetHg19,660 chainNetHg19,680 chainNetHg19,880 chainNetHg19,955 chainNetHg19,977 chainNetHg19,1001 chainNetHg19,1015 chainNetMm10,19 chainNetMm10,66 chainNetMm10,181 chainNetMm10,201 chainNetMm10,253 chainNetMm10,274 chainNetMm10,356 chainNetMm10,366 chainNetMm10,484 chainNetMm10,504 chainNetMm10,637 chainNetMm10,642 chainNetMm10,660 chainNetMm10,680 chainNetMm10,880 chainNetMm10,955 chainNetMm10,977 chainNetMm10,1001 chainNetMm10,1015 chainNetMm39,20 chainNetMm39,67 chainNetMm39,182 chainNetMm39,202 chainNetMm39,254 chainNetMm39,275 chainNetMm39,357 chainNetMm39,367 chainNetMm39,485 chainNetMm39,505 chainNetMm39,638 chainNetMm39,643 chainNetMm39,661 chainNetMm39,681 chainNetMm39,881 chainNetMm39,956 chainNetMm39,978 chainNetMm39,1002 chainNetMm39,1016 chainNetMonDom5,20 chainNetMonDom5,67 chainNetMonDom5,182 chainNetMonDom5,202 chainNetMonDom5,254 chainNetMonDom5,275 chainNetMonDom5,357 chainNetMonDom5,367 chainNetMonDom5,485 chainNetMonDom5,505 chainNetMonDom5,638 chainNetMonDom5,643 chainNetMonDom5,661 chainNetMonDom5,681 chainNetMonDom5,881 chainNetMonDom5,956 chainNetMonDom5,978 chainNetMonDom5,1002 chainNetMonDom5,1016 chainNetRn6,21 chainNetRn6,68 chainNetRn6,184 chainNetRn6,204 chainNetRn6,256 chainNetRn6,277 chainNetRn6,360 chainNetRn6,370 chainNetRn6,488 chainNetRn6,508 chainNetRn6,641 chainNetRn6,646 chainNetRn6,664 chainNetRn6,684 chainNetRn6,884 chainNetRn6,959 chainNetRn6,981 chainNetRn6,1005 chainNetRn6,1019 chainRn6,18 chainRn6,65 chainRn6,181 chainRn6,201 chainRn6,253 chainRn6,274 chainRn6,357 chainRn6,367 chainRn6,485 chainRn6,505 chainRn6,638 chainRn6,643 chainRn6,661 chainRn6,681 chainRn6,881 chainRn6,956 chainRn6,978 chainRn6,1002 chainRn6,1016 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ctgPos2,17 ctgPos2,42 ctgPos2,51 ensGene,33 ensGene,134 est,40 est,70 est,79 est,97 est,99 est,134 est,173 est,199 est,210 est,246 est,315 est,425 est,502 est,518 est,536 est,553 est,615 est,623 est,627 est,706 gap,30 gap,36 gap,70 gap,80 gap,89 gap,102 gap,112 gap,163 gap,178 gc5Base,19 gc5Base,46 gc5Base,52 gc5Base,67 gc5Base,76 geneid,28 geneid,35 geneid,101 geneid,104 geneid,113 geneid,124 geneid,135 geneid,138 geneid,147 genscan,43 genscan,110 genscan,134 genscan,212 gold,15 gold,78 gold,103 gold,131 intronEst,31 intronEst,52 intronEst,64 intronEst,96 intronEst,108 intronEst,117 intronEst,151 intronEst,160 intronEst,178 intronEst,180 intronEst,215 intronEst,254 intronEst,280 intronEst,291 intronEst,327 intronEst,396 intronEst,506 intronEst,583 intronEst,599 intronEst,617 intronEst,634 intronEst,696 intronEst,704 intronEst,708 intronEst,787 microsat,27 microsat,55 microsat,64 microsat,81 mrna,51 mrna,80 mrna,119 mrna,145 mrna,156 mrna,192 mrna,261 mrna,364 mrna,422 ncbiRefSeqPsl,5 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netCavPor3,19 netCavPor3,66 netCavPor3,184 netCavPor3,204 netCavPor3,256 netCavPor3,278 netCavPor3,361 netCavPor3,371 netCavPor3,489 netCavPor3,509 netCavPor3,644 netCavPor3,649 netCavPor3,667 netCavPor3,687 netCavPor3,887 netCavPor3,962 netCavPor3,984 netCavPor3,1008 netCavPor3,1022 netHg19,17 netHg19,64 netHg19,179 netHg19,199 netHg19,251 netHg19,272 netHg19,354 netHg19,364 netHg19,482 netHg19,502 netHg19,635 netHg19,640 netHg19,658 netHg19,678 netHg19,878 netHg19,953 netHg19,975 netHg19,999 netHg19,1013 netMm10,17 netMm10,64 netMm10,179 netMm10,199 netMm10,251 netMm10,272 netMm10,354 netMm10,364 netMm10,482 netMm10,502 netMm10,635 netMm10,640 netMm10,658 netMm10,678 netMm10,878 netMm10,953 netMm10,975 netMm10,999 netMm10,1013 netMm39,17 netMm39,64 netMm39,179 netMm39,199 netMm39,251 netMm39,272 netMm39,354 netMm39,364 netMm39,482 netMm39,502 netMm39,635 netMm39,640 netMm39,658 netMm39,678 netMm39,878 netMm39,953 netMm39,975 netMm39,999 netMm39,1013 netMonDom5,17 netMonDom5,64 netMonDom5,179 netMonDom5,199 netMonDom5,251 netMonDom5,272 netMonDom5,354 netMonDom5,364 netMonDom5,482 netMonDom5,502 netMonDom5,635 netMonDom5,640 netMonDom5,658 netMonDom5,678 netMonDom5,878 netMonDom5,953 netMonDom5,975 netMonDom5,999 netMonDom5,1013 netRn6,18 netRn6,65 netRn6,181 netRn6,201 netRn6,253 netRn6,274 netRn6,357 netRn6,367 netRn6,485 netRn6,505 netRn6,638 netRn6,643 netRn6,661 netRn6,681 netRn6,881 netRn6,956 netRn6,978 netRn6,1002 netRn6,1016 quality,20 quality,31 quality,37 quality,61 quality,67 quality,80 quality,92 refGene,5 refGene,101 refGene,120 refGene,134 refGene,159 refGene,270 refGene,302 refGene,415 refSeqComposite,161 refSeqComposite,194 refSeqComposite,212 refSeqComposite,259 refSeqComposite,320 refSeqComposite,342 refSeqComposite,436 refSeqComposite,486 refSeqComposite,517 refSeqComposite,524 refSeqComposite,550 refSeqComposite,608 refSeqComposite,628 refSeqComposite,706 refSeqComposite,734 refSeqComposite,783 refSeqComposite,792 refSeqComposite,872 refSeqComposite,887 refSeqComposite,939 refSeqComposite,985 refSeqComposite,1003 refSeqComposite,1051 refSeqComposite,1238 refSeqComposite,1270 refSeqComposite,1343 refSeqComposite,1424 refSeqComposite,1426 refSeqComposite,1496 refSeqComposite,1566 refSeqComposite,1646 refSeqComposite,1692 refSeqComposite,1696 refSeqComposite,1802 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 tRNAs,49 tRNAs,72 tRNAs,82 tRNAs,90 tRNAs,164 tRNAs,232 tRNAs,245 tRNAs,273 tRNAs,320 tRNAs,358 tRNAs,373 tRNAs,450 tRNAs,481 tRNAs,496 transMapEnsemblV5,85 transMapEnsemblV5,139 transMapEnsemblV5,168 transMapEnsemblV5,207 transMapEnsemblV5,273 transMapEnsemblV5,280 transMapEnsemblV5,296 transMapEnsemblV5,308 transMapEnsemblV5,321 transMapEnsemblV5,338 transMapEnsemblV5,357 transMapEnsemblV5,375 transMapEnsemblV5,454 transMapEnsemblV5,505 transMapEnsemblV5,548 transMapEnsemblV5,736 transMapEnsemblV5,801 transMapEstV5,54 transMapEstV5,108 transMapEstV5,137 transMapEstV5,176 transMapEstV5,242 transMapEstV5,249 transMapEstV5,265 transMapEstV5,277 transMapEstV5,290 transMapEstV5,307 transMapEstV5,326 transMapEstV5,344 transMapEstV5,423 transMapEstV5,474 transMapEstV5,517 transMapEstV5,705 transMapEstV5,770 transMapRefSeqV5,54 transMapRefSeqV5,108 transMapRefSeqV5,137 transMapRefSeqV5,176 transMapRefSeqV5,242 transMapRefSeqV5,249 transMapRefSeqV5,265 transMapRefSeqV5,277 transMapRefSeqV5,290 transMapRefSeqV5,307 transMapRefSeqV5,326 transMapRefSeqV5,344 transMapRefSeqV5,423 transMapRefSeqV5,474 transMapRefSeqV5,517 transMapRefSeqV5,705 transMapRefSeqV5,770 transMapRnaV5,54 transMapRnaV5,108 transMapRnaV5,137 transMapRnaV5,176 transMapRnaV5,242 transMapRnaV5,249 transMapRnaV5,265 transMapRnaV5,277 transMapRnaV5,290 transMapRnaV5,307 transMapRnaV5,326 transMapRnaV5,344 transMapRnaV5,423 transMapRnaV5,474 transMapRnaV5,517 transMapRnaV5,705 transMapRnaV5,770 transMapV5,55 transMapV5,214 transMapV5,243 transMapV5,282 transMapV5,348 transMapV5,355 transMapV5,371 transMapV5,383 transMapV5,396 transMapV5,413 transMapV5,432 transMapV5,450 transMapV5,529 transMapV5,580 transMapV5,623 transMapV5,811 transMapV5,876 unipAliSwissprot,5 unipAliTrembl,5 unipInterest,4 uniprot,83 uniprot,269 uniprot,298 uniprot,310 uniprot,385 uniprot,407 uniprot,420 uniprot,452 uniprot,465 uniprot,542 uniprot,561 uniprot,652 uniprot,677 uniprot,877 uniprot,902 uniprot,980 uniprot,1111 uniprot,1125 uniprot,1159 uniprot,1166 uniprot,1181 uniprot,1288 uniprot,1298 uniprot,1306 uniprot,1315 uniprot,1347 uniprot,1360 uniprot,1363 uniprot,1397 uniprot,1436 uniprot,1457 uniprot,1590 uniprot,1594 uniprot,1639 uniprot,1646 uniprot,1656 uniprot,1666 uniprot,1684 uniprot,1687 uniprot,1710 uniprot,1951 xenoMrna,17 xenoMrna,56 xenoMrna,74 xenoMrna,96 xenoMrna,106 xenoMrna,155 xenoMrna,194 xenoMrna,220 xenoMrna,231 xenoMrna,267 xenoMrna,336 xenoMrna,439 xenoMrna,497 xenoRefGene,61 xenoRefGene,80 xenoRefGene,94 xenoRefGene,119 xenoRefGene,230 xenoRefGene,262 xenoRefGene,374 off chainCavPor3,340 chainCavPor3,346 chainHg19,333 chainHg19,339 chainMm10,333 chainMm10,339 chainMm39,333 chainMm39,339 chainMonDom5,333 chainMonDom5,339 chainNetCavPor3,343 chainNetCavPor3,349 chainNetHg19,335 chainNetHg19,341 chainNetMm10,335 chainNetMm10,341 chainNetMm39,336 chainNetMm39,342 chainNetMonDom5,336 chainNetMonDom5,342 chainNetRn6,339 chainNetRn6,345 chainRn6,336 chainRn6,342 netCavPor3,340 netCavPor3,346 netHg19,333 netHg19,339 netMm10,333 netMm10,339 netMm39,333 netMm39,339 netMonDom5,333 netMonDom5,339 netRn6,336 netRn6,342 refGene,172 refSeqComposite,806 xenoRefGene,132 offers genscan,79 often HLTOGAannotvHg38v1,206 chainCavPor3,214 chainCavPor3,226 chainHg19,209 chainHg19,221 chainMm10,209 chainMm10,221 chainMm39,209 chainMm39,221 chainMonDom5,209 chainMonDom5,221 chainNetCavPor3,217 chainNetCavPor3,229 chainNetHg19,211 chainNetHg19,223 chainNetMm10,211 chainNetMm10,223 chainNetMm39,212 chainNetMm39,224 chainNetMonDom5,212 chainNetMonDom5,224 chainNetRn6,214 chainNetRn6,226 chainRn6,211 chainRn6,223 netCavPor3,214 netCavPor3,226 netHg19,209 netHg19,221 netMm10,209 netMm10,221 netMm39,209 netMm39,221 netMonDom5,209 netMonDom5,221 netRn6,211 netRn6,223 ograve geneid,42 older uniprot,1560 uniprot,1647 oligo-dt est,495 intronEst,576 omim refSeqComposite,780 refSeqComposite,799 omitted nestedRepeats,165 on HLTOGAannotvHg38v1,79 HLTOGAannotvHg38v1,295 augustusGene,29 augustusGene,37 augustusGene,151 blastHg18KG,150 chainCavPor3,328 chainCavPor3,354 chainCavPor3,457 chainCavPor3,471 chainCavPor3,521 chainCavPor3,526 chainCavPor3,541 chainCavPor3,774 chainHg19,321 chainHg19,347 chainHg19,450 chainHg19,464 chainHg19,514 chainHg19,519 chainHg19,534 chainHg19,765 chainMm10,321 chainMm10,347 chainMm10,450 chainMm10,464 chainMm10,514 chainMm10,519 chainMm10,534 chainMm10,765 chainMm39,321 chainMm39,347 chainMm39,450 chainMm39,464 chainMm39,514 chainMm39,519 chainMm39,534 chainMm39,765 chainMonDom5,321 chainMonDom5,347 chainMonDom5,450 chainMonDom5,464 chainMonDom5,514 chainMonDom5,519 chainMonDom5,534 chainMonDom5,765 chainNetCavPor3,331 chainNetCavPor3,357 chainNetCavPor3,460 chainNetCavPor3,474 chainNetCavPor3,524 chainNetCavPor3,529 chainNetCavPor3,544 chainNetCavPor3,777 chainNetHg19,323 chainNetHg19,349 chainNetHg19,452 chainNetHg19,466 chainNetHg19,516 chainNetHg19,521 chainNetHg19,536 chainNetHg19,767 chainNetMm10,323 chainNetMm10,349 chainNetMm10,452 chainNetMm10,466 chainNetMm10,516 chainNetMm10,521 chainNetMm10,536 chainNetMm10,767 chainNetMm39,324 chainNetMm39,350 chainNetMm39,453 chainNetMm39,467 chainNetMm39,517 chainNetMm39,522 chainNetMm39,537 chainNetMm39,768 chainNetMonDom5,324 chainNetMonDom5,350 chainNetMonDom5,453 chainNetMonDom5,467 chainNetMonDom5,517 chainNetMonDom5,522 chainNetMonDom5,537 chainNetMonDom5,768 chainNetRn6,327 chainNetRn6,353 chainNetRn6,456 chainNetRn6,470 chainNetRn6,520 chainNetRn6,525 chainNetRn6,540 chainNetRn6,771 chainRn6,324 chainRn6,350 chainRn6,453 chainRn6,467 chainRn6,517 chainRn6,522 chainRn6,537 chainRn6,768 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 ensGene,20 ensGene,118 ensGene,123 ensGene,129 ensGene,140 est,229 est,278 gap,33 genscan,27 genscan,52 gold,52 intronEst,310 intronEst,359 mrna,175 mrna,224 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netCavPor3,328 netCavPor3,354 netCavPor3,457 netCavPor3,471 netCavPor3,521 netCavPor3,526 netCavPor3,541 netCavPor3,774 netHg19,321 netHg19,347 netHg19,450 netHg19,464 netHg19,514 netHg19,519 netHg19,534 netHg19,765 netMm10,321 netMm10,347 netMm10,450 netMm10,464 netMm10,514 netMm10,519 netMm10,534 netMm10,765 netMm39,321 netMm39,347 netMm39,450 netMm39,464 netMm39,514 netMm39,519 netMm39,534 netMm39,765 netMonDom5,321 netMonDom5,347 netMonDom5,450 netMonDom5,464 netMonDom5,514 netMonDom5,519 netMonDom5,534 netMonDom5,765 netRn6,324 netRn6,350 netRn6,453 netRn6,467 netRn6,517 netRn6,522 netRn6,537 netRn6,768 refGene,72 refGene,383 refSeqComposite,131 refSeqComposite,181 refSeqComposite,238 refSeqComposite,252 refSeqComposite,360 refSeqComposite,513 refSeqComposite,566 refSeqComposite,972 refSeqComposite,1116 refSeqComposite,1596 refSeqComposite,1638 refSeqComposite,1676 refSeqComposite,1701 refSeqComposite,1770 rmsk,74 tRNAs,269 transMapEnsemblV5,567 transMapEnsemblV5,804 transMapEstV5,536 transMapEstV5,773 transMapRefSeqV5,536 transMapRefSeqV5,773 transMapRnaV5,536 transMapRnaV5,773 transMapV5,102 transMapV5,642 transMapV5,879 uniprot,19 uniprot,61 uniprot,129 uniprot,172 uniprot,232 uniprot,443 uniprot,482 uniprot,648 uniprot,728 uniprot,772 uniprot,809 uniprot,859 uniprot,1035 uniprot,1139 uniprot,1176 uniprot,1366 uniprot,1446 uniprot,1534 uniprot,1558 uniprot,1567 uniprot,1581 uniprot,1605 uniprot,1887 uniprot,2039 xenoMrna,250 xenoMrna,299 xenoRefGene,342 once est,263 intronEst,344 mrna,209 uniprot,647 xenoMrna,284 one augustusGene,169 chainCavPor3,192 chainCavPor3,362 chainCavPor3,508 chainCavPor3,801 chainCavPor3,897 chainHg19,187 chainHg19,355 chainHg19,501 chainHg19,792 chainHg19,888 chainMm10,187 chainMm10,355 chainMm10,501 chainMm10,792 chainMm10,888 chainMm39,187 chainMm39,355 chainMm39,501 chainMm39,792 chainMm39,888 chainMonDom5,187 chainMonDom5,355 chainMonDom5,501 chainMonDom5,792 chainMonDom5,888 chainNetCavPor3,195 chainNetCavPor3,365 chainNetCavPor3,511 chainNetCavPor3,804 chainNetCavPor3,900 chainNetHg19,189 chainNetHg19,357 chainNetHg19,503 chainNetHg19,794 chainNetHg19,890 chainNetMm10,189 chainNetMm10,357 chainNetMm10,503 chainNetMm10,794 chainNetMm10,890 chainNetMm39,190 chainNetMm39,358 chainNetMm39,504 chainNetMm39,795 chainNetMm39,891 chainNetMonDom5,190 chainNetMonDom5,358 chainNetMonDom5,504 chainNetMonDom5,795 chainNetMonDom5,891 chainNetRn6,192 chainNetRn6,361 chainNetRn6,507 chainNetRn6,798 chainNetRn6,894 chainRn6,189 chainRn6,358 chainRn6,504 chainRn6,795 chainRn6,891 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 est,170 est,281 est,314 intronEst,67 intronEst,251 intronEst,362 intronEst,395 mrna,116 mrna,227 mrna,260 netCavPor3,192 netCavPor3,362 netCavPor3,508 netCavPor3,801 netCavPor3,897 netHg19,187 netHg19,355 netHg19,501 netHg19,792 netHg19,888 netMm10,187 netMm10,355 netMm10,501 netMm10,792 netMm10,888 netMm39,187 netMm39,355 netMm39,501 netMm39,792 netMm39,888 netMonDom5,187 netMonDom5,355 netMonDom5,501 netMonDom5,792 netMonDom5,888 netRn6,189 netRn6,358 netRn6,504 netRn6,795 netRn6,891 transMapV5,77 uniprot,74 uniprot,77 uniprot,155 uniprot,981 uniprot,1098 uniprot,1638 xenoMrna,191 xenoMrna,302 xenoMrna,335 ones transMapEnsemblV5,50 uniprot,1041 ongoing uniprot,1569 only chainCavPor3,358 chainHg19,351 chainMm10,351 chainMm39,351 chainMonDom5,351 chainNetCavPor3,361 chainNetHg19,353 chainNetMm10,353 chainNetMm39,354 chainNetMonDom5,354 chainNetRn6,357 chainRn6,354 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 est,154 est,294 est,367 est,400 est,697 intronEst,235 intronEst,375 intronEst,448 intronEst,481 intronEst,778 microsat,61 mrna,100 mrna,240 mrna,313 mrna,413 netCavPor3,358 netHg19,351 netMm10,351 netMm39,351 netMonDom5,351 netRn6,354 refGene,248 refGene,293 refSeqComposite,157 refSeqComposite,217 refSeqComposite,234 refSeqComposite,246 refSeqComposite,512 refSeqComposite,564 refSeqComposite,1261 refSeqComposite,1533 transMapEnsemblV5,49 transMapEnsemblV5,650 transMapEstV5,619 transMapRefSeqV5,619 transMapRnaV5,619 transMapV5,725 uniprot,645 uniprot,975 uniprot,1178 uniprot,1302 uniprot,1804 xenoMrna,175 xenoMrna,315 xenoMrna,388 xenoMrna,487 xenoRefGene,208 xenoRefGene,253 oommen transMapEnsemblV5,728 transMapEstV5,697 transMapRefSeqV5,697 transMapRnaV5,697 transMapV5,803 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opossum chainMonDom5,1 chainMonDom5,3 chainMonDom5,65 chainMonDom5,96 chainMonDom5,148 chainMonDom5,266 chainMonDom5,291 chainMonDom5,572 chainMonDom5,620 chainNetMonDom5,1 chainNetMonDom5,4 chainNetMonDom5,68 chainNetMonDom5,99 chainNetMonDom5,151 chainNetMonDom5,269 chainNetMonDom5,294 chainNetMonDom5,575 chainNetMonDom5,623 chainNetMonDom5Viewchain,2 chainNetMonDom5Viewnet,2 netMonDom5,1 netMonDom5,3 netMonDom5,65 netMonDom5,96 netMonDom5,148 netMonDom5,266 netMonDom5,291 netMonDom5,572 netMonDom5,620 opposite chainCavPor3,553 chainHg19,546 chainMm10,546 chainMm39,546 chainMonDom5,546 chainNetCavPor3,556 chainNetHg19,548 chainNetMm10,548 chainNetMm39,549 chainNetMonDom5,549 chainNetRn6,552 chainRn6,549 netCavPor3,553 netHg19,546 netMm10,546 netMm39,546 netMonDom5,546 netRn6,549 option augustusGene,167 augustusGene,187 est,413 genscan,94 intronEst,494 mrna,350 refGene,152 refGene,204 refSeqComposite,773 refSeqComposite,838 transMapEnsemblV5,134 transMapEstV5,103 transMapRefSeqV5,103 transMapRnaV5,103 transMapV5,209 xenoMrna,425 xenoRefGene,112 xenoRefGene,164 optional refGene,182 refSeqComposite,816 xenoRefGene,142 options est,442 gc5Base,70 genscan,85 intronEst,523 mrna,381 quality,83 xenoMrna,456 or HLTOGAannotvHg38v1,39 HLTOGAannotvHg38v1,96 HLTOGAannotvHg38v1,264 blastHg18KG,196 chainCavPor3,32 chainCavPor3,131 chainCavPor3,155 chainCavPor3,187 chainCavPor3,492 chainCavPor3,869 chainCavPor3,898 chainHg19,30 chainHg19,127 chainHg19,150 chainHg19,182 chainHg19,485 chainHg19,860 chainHg19,889 chainMm10,30 chainMm10,127 chainMm10,150 chainMm10,182 chainMm10,485 chainMm10,860 chainMm10,889 chainMm39,30 chainMm39,127 chainMm39,150 chainMm39,182 chainMm39,485 chainMm39,860 chainMm39,889 chainMonDom5,30 chainMonDom5,127 chainMonDom5,150 chainMonDom5,182 chainMonDom5,485 chainMonDom5,860 chainMonDom5,889 chainNetCavPor3,35 chainNetCavPor3,134 chainNetCavPor3,158 chainNetCavPor3,190 chainNetCavPor3,495 chainNetCavPor3,872 chainNetCavPor3,901 chainNetHg19,32 chainNetHg19,129 chainNetHg19,152 chainNetHg19,184 chainNetHg19,487 chainNetHg19,862 chainNetHg19,891 chainNetMm10,32 chainNetMm10,129 chainNetMm10,152 chainNetMm10,184 chainNetMm10,487 chainNetMm10,862 chainNetMm10,891 chainNetMm39,33 chainNetMm39,130 chainNetMm39,153 chainNetMm39,185 chainNetMm39,488 chainNetMm39,863 chainNetMm39,892 chainNetMonDom5,33 chainNetMonDom5,130 chainNetMonDom5,153 chainNetMonDom5,185 chainNetMonDom5,488 chainNetMonDom5,863 chainNetMonDom5,892 chainNetRn6,34 chainNetRn6,132 chainNetRn6,155 chainNetRn6,187 chainNetRn6,491 chainNetRn6,866 chainNetRn6,895 chainRn6,31 chainRn6,129 chainRn6,152 chainRn6,184 chainRn6,488 chainRn6,863 chainRn6,892 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 ensGene,68 ensGene,89 ensGene,110 est,171 est,306 est,325 est,334 est,399 est,477 est,509 est,523 intronEst,252 intronEst,387 intronEst,406 intronEst,415 intronEst,480 intronEst,558 intronEst,590 intronEst,604 mrna,117 mrna,252 mrna,271 mrna,280 ncbiRefSeqCurated,11 ncbiRefSeqOther,13 ncbiRefSeqPredicted,9 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netCavPor3,32 netCavPor3,131 netCavPor3,155 netCavPor3,187 netCavPor3,492 netCavPor3,869 netCavPor3,898 netHg19,30 netHg19,127 netHg19,150 netHg19,182 netHg19,485 netHg19,860 netHg19,889 netMm10,30 netMm10,127 netMm10,150 netMm10,182 netMm10,485 netMm10,860 netMm10,889 netMm39,30 netMm39,127 netMm39,150 netMm39,182 netMm39,485 netMm39,860 netMm39,889 netMonDom5,30 netMonDom5,127 netMonDom5,150 netMonDom5,182 netMonDom5,485 netMonDom5,860 netMonDom5,889 netRn6,31 netRn6,129 netRn6,152 netRn6,184 netRn6,488 netRn6,863 netRn6,892 refGene,62 refGene,170 refSeqComposite,85 refSeqComposite,121 refSeqComposite,227 refSeqComposite,279 refSeqComposite,354 refSeqComposite,400 refSeqComposite,409 refSeqComposite,415 refSeqComposite,424 refSeqComposite,619 refSeqComposite,640 refSeqComposite,688 refSeqComposite,779 refSeqComposite,789 refSeqComposite,804 refSeqComposite,948 refSeqComposite,970 refSeqComposite,1049 refSeqComposite,1310 refSeqComposite,1325 refSeqComposite,1492 refSeqComposite,1514 rmsk,251 rmsk,280 tRNAs,183 tRNAs,211 tRNAs,235 tRNAs,300 transMapEnsemblV5,19 transMapEnsemblV5,531 transMapEnsemblV5,559 transMapEnsemblV5,602 transMapEnsemblV5,622 transMapEstV5,500 transMapEstV5,528 transMapEstV5,571 transMapEstV5,591 transMapRefSeqV5,500 transMapRefSeqV5,528 transMapRefSeqV5,571 transMapRefSeqV5,591 transMapRnaV5,500 transMapRnaV5,528 transMapRnaV5,571 transMapRnaV5,591 transMapV5,47 transMapV5,606 transMapV5,634 transMapV5,677 transMapV5,697 uniprot,317 uniprot,389 uniprot,436 uniprot,829 uniprot,888 uniprot,982 uniprot,1038 uniprot,1205 uniprot,1266 uniprot,1401 uniprot,1449 uniprot,1722 uniprot,1776 uniprot,1835 uniprot,1879 xenoMrna,92 xenoMrna,192 xenoMrna,327 xenoMrna,346 xenoMrna,355 xenoRefGene,130 order gap,27 gold,40 gold,100 tRNAs,250 uniprot,872 ordered gap,114 organ est,195 est,201 intronEst,276 intronEst,282 mrna,141 mrna,147 xenoMrna,216 xenoMrna,222 organism chainCavPor3,337 chainCavPor3,367 chainHg19,330 chainHg19,360 chainMm10,330 chainMm10,360 chainMm39,330 chainMm39,360 chainMonDom5,330 chainMonDom5,360 chainNetCavPor3,340 chainNetCavPor3,370 chainNetHg19,332 chainNetHg19,362 chainNetMm10,332 chainNetMm10,362 chainNetMm39,333 chainNetMm39,363 chainNetMonDom5,333 chainNetMonDom5,363 chainNetRn6,336 chainNetRn6,366 chainRn6,333 chainRn6,363 netCavPor3,337 netCavPor3,367 netHg19,330 netHg19,360 netMm10,330 netMm10,360 netMm39,330 netMm39,360 netMonDom5,330 netMonDom5,360 netRn6,333 netRn6,363 organism-specific blastHg18KG,90 organisms chainCavPor3,914 chainHg19,905 chainMm10,905 chainMm39,905 chainMonDom5,905 chainNetCavPor3,917 chainNetHg19,907 chainNetMm10,907 chainNetMm39,908 chainNetMonDom5,908 chainNetRn6,911 chainRn6,908 nestedRepeats,295 netCavPor3,914 netHg19,905 netMm10,905 netMm39,905 netMonDom5,905 netRn6,908 rmsk,302 transMapEnsemblV5,159 transMapEnsemblV5,216 transMapEstV5,128 transMapEstV5,185 transMapRefSeqV5,128 transMapRefSeqV5,185 transMapRnaV5,128 transMapRnaV5,185 transMapV5,64 transMapV5,152 transMapV5,234 transMapV5,291 uniprot,998 xenoMrna,25 xenoRefGene,20 organized refSeqComposite,1373 organizes chainCavPor3,622 chainHg19,614 chainMm10,614 chainMm39,614 chainMonDom5,614 chainNetCavPor3,625 chainNetHg19,616 chainNetMm10,616 chainNetMm39,617 chainNetMonDom5,617 chainNetRn6,620 chainRn6,617 netCavPor3,622 netHg19,614 netMm10,614 netMm39,614 netMonDom5,614 netRn6,617 orientation chainCavPor3,554 chainHg19,547 chainMm10,547 chainMm39,547 chainMonDom5,547 chainNetCavPor3,557 chainNetHg19,549 chainNetMm10,549 chainNetMm39,550 chainNetMonDom5,550 chainNetRn6,553 chainRn6,550 cytoBandIdeo,6 gap,29 gold,41 gold,102 netCavPor3,554 netHg19,547 netMm10,547 netMm39,547 netMonDom5,547 netRn6,550 xenoMrna,73 xenoMrna,95 orientations xenoMrna,105 oriented gap,116 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 orthologous HLTOGAannotvHg38v1,121 transMapEnsemblV5,87 transMapEstV5,56 transMapRefSeqV5,56 transMapRnaV5,56 transMapV5,57 orthologs HLTOGAannotvHg38v1,20 HLTOGAannotvHg38v1,33 HLTOGAannotvHg38v1,93 chainCavPor3,290 chainHg19,284 chainMm10,284 chainMm39,284 chainMonDom5,284 chainNetCavPor3,293 chainNetHg19,286 chainNetMm10,286 chainNetMm39,287 chainNetMonDom5,287 chainNetRn6,289 chainRn6,286 netCavPor3,290 netHg19,284 netMm10,284 netMm39,284 netMonDom5,284 netRn6,286 transMapV5,94 orthology HLTOGAannotvHg38v1,303 HLTOGAannotvHg38v1,360 orycun2 ensGene,80 refSeqComposite,1549 refSeqComposite,1613 transMapEnsemblV5,203 transMapEnsemblV5,662 transMapEstV5,172 transMapEstV5,631 transMapRefSeqV5,172 transMapRefSeqV5,631 transMapRnaV5,172 transMapRnaV5,631 transMapV5,278 transMapV5,737 uniprot,1816 orycun2.ensembl.transmapv4.bigpsl transMapEnsemblV5,590 transMapEstV5,559 transMapRefSeqV5,559 transMapRnaV5,559 orycun2.ensembl.transmapv5.bigpsl transMapV5,665 orycun2.est.transmapv4.bigpsl transMapEnsemblV5,599 transMapEstV5,568 transMapRefSeqV5,568 transMapRnaV5,568 orycun2.est.transmapv5.bigpsl transMapV5,674 orycun2.refseq.transmapv4.bigpsl transMapEnsemblV5,593 transMapEnsemblV5,665 transMapEstV5,562 transMapEstV5,634 transMapRefSeqV5,562 transMapRefSeqV5,634 transMapRnaV5,562 transMapRnaV5,634 orycun2.refseq.transmapv5.bigpsl transMapV5,668 transMapV5,740 orycun2.rna.transmapv4.bigpsl transMapEnsemblV5,596 transMapEstV5,565 transMapRefSeqV5,565 transMapRnaV5,565 orycun2.rna.transmapv5.bigpsl transMapV5,671 osipova HLTOGAannotvHg38v1,338 ostell est,753 est,777 intronEst,837 intronEst,861 mrna,470 mrna,494 xenoMrna,545 xenoMrna,569 other augustusGene,208 chainCavPor3,26 chainCavPor3,419 chainCavPor3,512 chainHg19,24 chainHg19,412 chainHg19,505 chainMm10,24 chainMm10,412 chainMm10,505 chainMm39,24 chainMm39,412 chainMm39,505 chainMonDom5,24 chainMonDom5,412 chainMonDom5,505 chainNetCavPor3,29 chainNetCavPor3,422 chainNetCavPor3,515 chainNetHg19,26 chainNetHg19,414 chainNetHg19,507 chainNetMm10,26 chainNetMm10,414 chainNetMm10,507 chainNetMm39,27 chainNetMm39,415 chainNetMm39,508 chainNetMonDom5,27 chainNetMonDom5,415 chainNetMonDom5,508 chainNetRn6,28 chainNetRn6,418 chainNetRn6,511 chainRn6,25 chainRn6,415 chainRn6,508 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 ncbiRefSeqOther,2 ncbiRefSeqOther,5 nestedRepeats,376 netCavPor3,26 netCavPor3,419 netCavPor3,512 netHg19,24 netHg19,412 netHg19,505 netMm10,24 netMm10,412 netMm10,505 netMm39,24 netMm39,412 netMm39,505 netMonDom5,24 netMonDom5,412 netMonDom5,505 netRn6,25 netRn6,415 netRn6,508 refSeqComposite,274 refSeqComposite,378 refSeqComposite,381 refSeqComposite,1367 refSeqComposite,1393 rmsk,195 rmsk,399 tRNAs,243 transMapEnsemblV5,30 transMapEnsemblV5,46 transMapEnsemblV5,368 transMapEstV5,28 transMapEstV5,337 transMapRefSeqV5,28 transMapRefSeqV5,337 transMapRnaV5,28 transMapRnaV5,337 transMapV5,27 transMapV5,443 unipOther,1 unipOther,4 uniprot,90 uniprot,122 uniprot,205 uniprot,319 uniprot,393 uniprot,396 uniprot,862 uniprot,1200 xenoMrna,1 xenoMrna,26 xenoRefGene,1 xenoRefGene,21 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 uniprot,1312 uniprot,1344 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 est,678 intronEst,759 transMapEnsemblV5,246 transMapEstV5,215 transMapRefSeqV5,215 transMapRnaV5,215 transMapV5,321 ottonello tRNAs,478 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 ensGene,26 ensGene,84 ensGene,91 ensGene,113 ensGene,124 ensGene,130 ensGene,141 genscan,58 refGene,78 refSeqComposite,137 refSeqComposite,1321 refSeqComposite,1328 refSeqComposite,1344 refSeqComposite,1359 refSeqComposite,1483 refSeqComposite,1503 refSeqComposite,1624 refSeqComposite,1677 refSeqComposite,1684 refSeqComposite,1702 rmsk,124 rmsk,129 transMapEnsemblV5,556 transMapEnsemblV5,562 transMapEnsemblV5,572 transMapEnsemblV5,611 transMapEstV5,525 transMapEstV5,531 transMapEstV5,541 transMapEstV5,580 transMapRefSeqV5,525 transMapRefSeqV5,531 transMapRefSeqV5,541 transMapRefSeqV5,580 transMapRnaV5,525 transMapRnaV5,531 transMapRnaV5,541 transMapRnaV5,580 transMapV5,631 transMapV5,637 transMapV5,647 transMapV5,686 uniprot,891 uniprot,1697 uniprot,1765 uniprot,1829 uniprot,1836 uniprot,1870 uniprot,1874 out chainCavPor3,643 chainHg19,634 chainMm10,634 chainMm39,634 chainMonDom5,634 chainNetCavPor3,646 chainNetHg19,636 chainNetMm10,636 chainNetMm39,637 chainNetMonDom5,637 chainNetRn6,640 chainRn6,637 netCavPor3,643 netHg19,634 netMm10,634 netMm39,634 netMonDom5,634 netRn6,637 quality,42 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 outputs rmsk,35 outside est,614 intronEst,695 refSeqComposite,686 uniprot,558 over blastHg18KG,104 blastHg18KG,118 chainCavPor3,200 chainCavPor3,658 chainHg19,195 chainHg19,649 chainMm10,195 chainMm10,649 chainMm39,195 chainMm39,649 chainMonDom5,195 chainMonDom5,649 chainNetCavPor3,203 chainNetCavPor3,661 chainNetHg19,197 chainNetHg19,651 chainNetMm10,197 chainNetMm10,651 chainNetMm39,198 chainNetMm39,652 chainNetMonDom5,198 chainNetMonDom5,652 chainNetRn6,200 chainNetRn6,655 chainRn6,197 chainRn6,652 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netCavPor3,200 netCavPor3,658 netHg19,195 netHg19,649 netMm10,195 netMm10,649 netMm39,195 netMm39,649 netMonDom5,195 netMonDom5,649 netRn6,197 netRn6,652 refSeqComposite,1031 uniprot,522 uniprot,536 overlapping chainCavPor3,116 chainCavPor3,180 chainHg19,112 chainHg19,175 chainMm10,112 chainMm10,175 chainMm39,112 chainMm39,175 chainMonDom5,112 chainMonDom5,175 chainNetCavPor3,119 chainNetCavPor3,183 chainNetHg19,114 chainNetHg19,177 chainNetMm10,114 chainNetMm10,177 chainNetMm39,115 chainNetMm39,178 chainNetMonDom5,115 chainNetMonDom5,178 chainNetRn6,117 chainNetRn6,180 chainRn6,114 chainRn6,177 gap,103 netCavPor3,116 netCavPor3,180 netHg19,112 netHg19,175 netMm10,112 netMm10,175 netMm39,112 netMm39,175 netMonDom5,112 netMonDom5,175 netRn6,114 netRn6,177 own uniprot,724 p genscan,205 nestedRepeats,329 rmsk,352 pac chainCavPor3,1042 chainHg19,1033 chainMm10,1033 chainMm39,1033 chainMonDom5,1033 chainNetCavPor3,1045 chainNetHg19,1035 chainNetMm10,1035 chainNetMm39,1036 chainNetMonDom5,1036 chainNetRn6,1039 chainRn6,1036 netCavPor3,1042 netHg19,1033 netMm10,1033 netMm39,1033 netMonDom5,1033 netRn6,1036 pack chainCavPor3,236 chainHg19,231 chainMm10,231 chainMm39,231 chainMonDom5,231 chainNetCavPor3,239 chainNetHg19,233 chainNetMm10,233 chainNetMm39,234 chainNetMonDom5,234 chainNetRn6,236 chainRn6,233 nestedRepeats,116 netCavPor3,236 netHg19,231 netMm10,231 netMm39,231 netMonDom5,231 netRn6,233 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 ensGene,127 ensGene,166 est,110 est,422 est,443 genscan,78 genscan,123 intronEst,191 intronEst,503 intronEst,524 mrna,56 mrna,361 mrna,382 refGene,54 refGene,138 refGene,229 refSeqComposite,113 refSeqComposite,738 refSeqComposite,863 refSeqComposite,1123 refSeqComposite,1641 rmsk,77 uniprot,236 uniprot,651 uniprot,1158 uniprot,1585 uniprot,2027 xenoMrna,131 xenoMrna,436 xenoMrna,457 xenoRefGene,98 xenoRefGene,189 pages chainCavPor3,779 chainHg19,770 chainMm10,770 chainMm39,770 chainMonDom5,770 chainNetCavPor3,782 chainNetHg19,772 chainNetMm10,772 chainNetMm39,773 chainNetMonDom5,773 chainNetRn6,776 chainRn6,773 netCavPor3,779 netHg19,770 netMm10,770 netMm39,770 netMonDom5,770 netRn6,773 pair gap,43 gap,134 paired-end gap,124 gold,53 pairwise chainCavPor3,1020 chainCavPor3,1038 chainHg19,1011 chainHg19,1029 chainMm10,1011 chainMm10,1029 chainMm39,1011 chainMm39,1029 chainMonDom5,1011 chainMonDom5,1029 chainNetCavPor3,1023 chainNetCavPor3,1041 chainNetHg19,1013 chainNetHg19,1031 chainNetMm10,1013 chainNetMm10,1031 chainNetMm39,1014 chainNetMm39,1032 chainNetMonDom5,1014 chainNetMonDom5,1032 chainNetRn6,1017 chainNetRn6,1035 chainRn6,1014 chainRn6,1032 netCavPor3,1020 netCavPor3,1038 netHg19,1011 netHg19,1029 netMm10,1011 netMm10,1029 netMm39,1011 netMm39,1029 netMonDom5,1011 netMonDom5,1029 netRn6,1014 netRn6,1032 transMapEnsemblV5,336 transMapEstV5,305 transMapRefSeqV5,305 transMapRnaV5,305 transMapV5,83 transMapV5,411 paradigm HLTOGAannotvHg38v1,76 paralogous transMapEnsemblV5,300 transMapEstV5,269 transMapRefSeqV5,269 transMapRnaV5,269 transMapV5,375 paralogs HLTOGAannotvHg38v1,95 chainCavPor3,229 chainHg19,224 chainMm10,224 chainMm39,224 chainMonDom5,224 chainNetCavPor3,232 chainNetHg19,226 chainNetMm10,226 chainNetMm39,227 chainNetMonDom5,227 chainNetRn6,229 chainRn6,226 netCavPor3,229 netHg19,224 netMm10,224 netMm39,224 netMonDom5,224 netRn6,226 transMapV5,160 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 parra geneid,157 geneid,178 part blastHg18KG,140 chainCavPor3,277 chainHg19,271 chainMm10,271 chainMm39,271 chainMonDom5,271 chainNetCavPor3,280 chainNetHg19,273 chainNetMm10,273 chainNetMm39,274 chainNetMonDom5,274 chainNetRn6,276 chainRn6,273 geneid,34 netCavPor3,277 netHg19,271 netMm10,271 netMm39,271 netMonDom5,271 netRn6,273 quality,91 refSeqComposite,523 partially HLTOGAannotvHg38v1,165 particular augustusGene,234 chainCavPor3,202 chainHg19,197 chainMm10,197 chainMm39,197 chainMonDom5,197 chainNetCavPor3,205 chainNetHg19,199 chainNetMm10,199 chainNetMm39,200 chainNetMonDom5,200 chainNetRn6,202 chainRn6,199 netCavPor3,202 netHg19,197 netMm10,197 netMm39,197 netMonDom5,197 netRn6,199 refSeqComposite,296 uniprot,1019 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts HLTOGAannotvHg38v1,200 chainCavPor3,41 chainCavPor3,52 chainHg19,39 chainHg19,50 chainMm10,39 chainMm10,50 chainMm39,39 chainMm39,50 chainMonDom5,39 chainMonDom5,50 chainNetCavPor3,44 chainNetCavPor3,55 chainNetHg19,41 chainNetHg19,52 chainNetMm10,41 chainNetMm10,52 chainNetMm39,42 chainNetMm39,53 chainNetMonDom5,42 chainNetMonDom5,53 chainNetRn6,43 chainNetRn6,54 chainRn6,40 chainRn6,51 netCavPor3,41 netCavPor3,52 netHg19,39 netHg19,50 netMm10,39 netMm10,50 netMm39,39 netMm39,50 netMonDom5,39 netMonDom5,50 netRn6,40 netRn6,51 xenoMrna,68 past uniprot,1690 patch uniprot,1423 patches uniprot,1432 patterns augustusGene,56 pavesi tRNAs,41 tRNAs,470 penalty blastHg18KG,97 pennsylvania chainCavPor3,925 chainCavPor3,1028 chainHg19,916 chainHg19,1019 chainMm10,916 chainMm10,1019 chainMm39,916 chainMm39,1019 chainMonDom5,916 chainMonDom5,1019 chainNetCavPor3,928 chainNetCavPor3,1031 chainNetHg19,918 chainNetHg19,1021 chainNetMm10,918 chainNetMm10,1021 chainNetMm39,919 chainNetMm39,1022 chainNetMonDom5,919 chainNetMonDom5,1022 chainNetRn6,922 chainNetRn6,1025 chainRn6,919 chainRn6,1022 netCavPor3,925 netCavPor3,1028 netHg19,916 netHg19,1019 netMm10,916 netMm10,1019 netMm39,916 netMm39,1019 netMonDom5,916 netMonDom5,1019 netRn6,919 netRn6,1022 peptide unipLocSignal,2 uniprot,477 uniprot,565 peptides blastHg18KG,21 unipLocSignal,5 uniprot,239 uniprot,512 per tRNAs,94 percent gc5Base,2 gc5Base,4 gc5Base,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5Base,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 est,605 intronEst,686 period microsat,65 permitted rmsk,314 ph.d chainCavPor3,1025 chainHg19,1016 chainMm10,1016 chainMm39,1016 chainMonDom5,1016 chainNetCavPor3,1028 chainNetHg19,1018 chainNetMm10,1018 chainNetMm39,1019 chainNetMonDom5,1019 chainNetRn6,1022 chainRn6,1019 netCavPor3,1025 netHg19,1016 netMm10,1016 netMm39,1016 netMonDom5,1016 netRn6,1019 pharmaceuticals uniprot,1969 phenotype uniprot,432 phosphorylation uniprot,590 phylofit transMapEnsemblV5,228 transMapEstV5,197 transMapRefSeqV5,197 transMapRnaV5,197 transMapV5,303 pia uniprot,1971 pick uniprot,1089 pig chainCavPor3,2 chainCavPor3,5 chainCavPor3,68 chainCavPor3,100 chainCavPor3,153 chainCavPor3,272 chainCavPor3,298 chainCavPor3,580 chainCavPor3,629 chainNetCavPor3,2 chainNetCavPor3,6 chainNetCavPor3,71 chainNetCavPor3,103 chainNetCavPor3,156 chainNetCavPor3,275 chainNetCavPor3,301 chainNetCavPor3,583 chainNetCavPor3,632 chainNetCavPor3Viewchain,3 chainNetCavPor3Viewnet,3 netCavPor3,2 netCavPor3,5 netCavPor3,68 netCavPor3,100 netCavPor3,153 netCavPor3,272 netCavPor3,298 netCavPor3,580 netCavPor3,629 pipeline refSeqComposite,1189 uniprot,1537 pipelines uniprot,1850 place chainCavPor3,798 chainHg19,789 chainMm10,789 chainMm39,789 chainMonDom5,789 chainNetCavPor3,801 chainNetHg19,791 chainNetMm10,791 chainNetMm39,792 chainNetMonDom5,792 chainNetRn6,795 chainRn6,792 netCavPor3,798 netHg19,789 netMm10,789 netMm39,789 netMonDom5,789 netRn6,792 placed chainCavPor3,840 chainHg19,831 chainMm10,831 chainMm39,831 chainMonDom5,831 chainNetCavPor3,843 chainNetHg19,833 chainNetMm10,833 chainNetMm39,834 chainNetMonDom5,834 chainNetRn6,837 chainRn6,834 netCavPor3,840 netHg19,831 netMm10,831 netMm39,831 netMonDom5,831 netRn6,834 placement refSeqComposite,964 places est,687 intronEst,768 mrna,403 refGene,283 refSeqComposite,1251 xenoMrna,477 xenoRefGene,243 plasmid est,466 intronEst,547 please ensGene,41 ensGene,160 refGene,44 refSeqComposite,102 refSeqComposite,1109 refSeqComposite,1681 tRNAs,278 tRNAs,282 tRNAs,361 uniprot,685 uniprot,1439 uniprot,1826 plos transMapEnsemblV5,808 transMapEstV5,777 transMapRefSeqV5,777 transMapRnaV5,777 transMapV5,883 plus geneid,108 refSeqComposite,898 pmc HLTOGAannotvHg38v1,373 chainCavPor3,1087 chainCavPor3,1118 chainHg19,1078 chainHg19,1109 chainMm10,1078 chainMm10,1109 chainMm39,1078 chainMm39,1109 chainMonDom5,1078 chainMonDom5,1109 chainNetCavPor3,1090 chainNetCavPor3,1121 chainNetHg19,1080 chainNetHg19,1111 chainNetMm10,1080 chainNetMm10,1111 chainNetMm39,1081 chainNetMm39,1112 chainNetMonDom5,1081 chainNetMonDom5,1112 chainNetRn6,1084 chainNetRn6,1115 chainRn6,1081 chainRn6,1112 ensGene,206 est,769 est,795 est,813 geneid,197 intronEst,853 intronEst,879 intronEst,897 microsat,136 mrna,486 mrna,512 mrna,530 netCavPor3,1087 netCavPor3,1118 netHg19,1078 netHg19,1109 netMm10,1078 netMm10,1109 netMm39,1078 netMm39,1109 netMonDom5,1078 netMonDom5,1109 netRn6,1081 netRn6,1112 refGene,356 refGene,398 refGene,432 refSeqComposite,1743 refSeqComposite,1785 refSeqComposite,1819 simpleRepeat,96 tRNAs,392 tRNAs,415 tRNAs,468 tRNAs,511 transMapEnsemblV5,752 transMapEnsemblV5,818 transMapEstV5,721 transMapEstV5,787 transMapRefSeqV5,721 transMapRefSeqV5,787 transMapRnaV5,721 transMapRnaV5,787 transMapV5,827 transMapV5,893 uniprot,2008 xenoMrna,561 xenoMrna,587 xenoMrna,605 xenoRefGene,315 xenoRefGene,357 xenoRefGene,391 pmc10193443 HLTOGAannotvHg38v1,374 pmc146525 tRNAs,469 pmc148217 microsat,137 simpleRepeat,97 pmc187518 est,814 intronEst,898 mrna,531 refGene,357 refSeqComposite,1744 xenoMrna,606 xenoRefGene,316 pmc208784 chainCavPor3,1088 chainHg19,1079 chainMm10,1079 chainMm39,1079 chainMonDom5,1079 chainNetCavPor3,1091 chainNetHg19,1081 chainNetMm10,1081 chainNetMm39,1082 chainNetMonDom5,1082 chainNetRn6,1085 chainRn6,1082 netCavPor3,1088 netHg19,1079 netMm10,1079 netMm39,1079 netMonDom5,1079 netRn6,1082 pmc2099585 transMapEnsemblV5,753 transMapEstV5,722 transMapRefSeqV5,722 transMapRnaV5,722 transMapV5,828 pmc2134963 transMapEnsemblV5,819 transMapEstV5,788 transMapRefSeqV5,788 transMapRnaV5,788 transMapV5,894 pmc2686519 tRNAs,393 pmc308124 tRNAs,416 pmc308779 est,796 intronEst,880 mrna,513 xenoMrna,588 pmc310871 geneid,198 pmc3245120 uniprot,2009 pmc3531190 est,770 intronEst,854 mrna,487 xenoMrna,562 pmc3965018 refGene,399 refSeqComposite,1786 xenoRefGene,358 pmc430961 chainCavPor3,1119 chainHg19,1110 chainMm10,1110 chainMm39,1110 chainMonDom5,1110 chainNetCavPor3,1122 chainNetHg19,1112 chainNetMm10,1112 chainNetMm39,1113 chainNetMonDom5,1113 chainNetRn6,1116 chainRn6,1113 netCavPor3,1119 netHg19,1110 netMm10,1110 netMm39,1110 netMonDom5,1110 netRn6,1113 pmc523650 tRNAs,512 pmc539979 refGene,433 refSeqComposite,1820 xenoRefGene,392 pmc99161 ensGene,207 pmid HLTOGAannotvHg38v1,371 augustusGene,314 augustusGene,339 chainCavPor3,1047 chainCavPor3,1085 chainCavPor3,1116 chainHg19,1038 chainHg19,1076 chainHg19,1107 chainMm10,1038 chainMm10,1076 chainMm10,1107 chainMm39,1038 chainMm39,1076 chainMm39,1107 chainMonDom5,1038 chainMonDom5,1076 chainMonDom5,1107 chainNetCavPor3,1050 chainNetCavPor3,1088 chainNetCavPor3,1119 chainNetHg19,1040 chainNetHg19,1078 chainNetHg19,1109 chainNetMm10,1040 chainNetMm10,1078 chainNetMm10,1109 chainNetMm39,1041 chainNetMm39,1079 chainNetMm39,1110 chainNetMonDom5,1041 chainNetMonDom5,1079 chainNetMonDom5,1110 chainNetRn6,1044 chainNetRn6,1082 chainNetRn6,1113 chainRn6,1041 chainRn6,1079 chainRn6,1110 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 ensGene,204 est,767 est,793 est,811 geneid,176 geneid,195 genscan,229 intronEst,851 intronEst,877 intronEst,895 microsat,134 mrna,484 mrna,510 mrna,528 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netCavPor3,1047 netCavPor3,1085 netCavPor3,1116 netHg19,1038 netHg19,1076 netHg19,1107 netMm10,1038 netMm10,1076 netMm10,1107 netMm39,1038 netMm39,1076 netMm39,1107 netMonDom5,1038 netMonDom5,1076 netMonDom5,1107 netRn6,1041 netRn6,1079 netRn6,1110 refGene,354 refGene,396 refGene,430 refSeqComposite,1741 refSeqComposite,1783 refSeqComposite,1817 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 tRNAs,390 tRNAs,413 tRNAs,438 tRNAs,466 tRNAs,509 transMapEnsemblV5,750 transMapEnsemblV5,782 transMapEnsemblV5,816 transMapEstV5,719 transMapEstV5,751 transMapEstV5,785 transMapRefSeqV5,719 transMapRefSeqV5,751 transMapRefSeqV5,785 transMapRnaV5,719 transMapRnaV5,751 transMapRnaV5,785 transMapV5,825 transMapV5,857 transMapV5,891 uniprot,2006 uniprot,2050 xenoMrna,559 xenoMrna,585 xenoMrna,603 xenoRefGene,313 xenoRefGene,355 xenoRefGene,389 point est,548 intronEst,629 rmsk,269 poly-a augustusGene,62 est,500 est,574 intronEst,581 intronEst,655 polymorphic microsat,41 simpleRepeat,46 polypeptide unipChain,6 uniprot,287 uniprot,289 population microsat,44 position chainCavPor3,714 chainHg19,705 chainMm10,705 chainMm39,705 chainMonDom5,705 chainNetCavPor3,717 chainNetHg19,707 chainNetMm10,707 chainNetMm39,708 chainNetMonDom5,708 chainNetRn6,711 chainRn6,708 geneid,84 netCavPor3,714 netHg19,705 netMm10,705 netMm39,705 netMonDom5,705 netRn6,708 quality,30 refSeqComposite,983 uniprot,610 positions HLTOGAannotvHg38v1,109 uniprot,1495 positive tRNAs,88 possible chainCavPor3,413 chainHg19,406 chainMm10,406 chainMm39,406 chainMonDom5,406 chainNetCavPor3,416 chainNetHg19,408 chainNetMm10,408 chainNetMm39,409 chainNetMonDom5,409 chainNetRn6,412 chainRn6,409 gold,27 netCavPor3,413 netHg19,406 netMm10,406 netMm39,406 netMonDom5,406 netRn6,409 refSeqComposite,185 uniprot,601 possibly chainCavPor3,289 chainHg19,283 chainMm10,283 chainMm39,283 chainMonDom5,283 chainNetCavPor3,292 chainNetHg19,285 chainNetMm10,285 chainNetMm39,286 chainNetMonDom5,286 chainNetRn6,288 chainRn6,285 netCavPor3,289 netHg19,283 netMm10,283 netMm39,283 netMonDom5,283 netRn6,285 simpleRepeat,18 post-alignment transMapEnsemblV5,303 transMapEstV5,272 transMapRefSeqV5,272 transMapRnaV5,272 transMapV5,378 post-processing uniprot,295 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 tRNAs,422 pp tRNAs,367 pre-filters tRNAs,43 pre-mrna genscan,185 precompiled refSeqComposite,1518 transMapEnsemblV5,626 transMapEstV5,595 transMapRefSeqV5,595 transMapRnaV5,595 transMapV5,701 uniprot,1780 predict geneid,55 predicted blastHg18KG,24 blastHg18KG,38 cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 geneid,77 geneid,125 ncbiRefSeq,8 ncbiRefSeqPredicted,2 ncbiRefSeqPredicted,6 refGene,108 refSeqComposite,203 refSeqComposite,339 refSeqComposite,358 refSeqComposite,403 refSeqComposite,589 refSeqComposite,615 refSeqComposite,691 refSeqComposite,711 refSeqComposite,1411 refSeqComposite,1671 tRNAs,19 tRNAs,322 uniprot,48 uniprot,193 xenoMrna,112 xenoRefGene,68 prediction augustusGene,321 genscan,73 genscan,211 refGene,93 refSeqComposite,375 refSeqComposite,600 transMapEnsemblV5,84 transMapEstV5,53 transMapRefSeqV5,53 transMapRnaV5,53 transMapV5,54 xenoRefGene,53 predictions HLTOGAannotvHg38v1,14 augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 blastHg18KG,12 ensGene,8 ensGene,12 ensGene,40 geneid,5 geneid,9 geneid,15 genscan,5 genscan,9 genscan,14 genscan,24 genscan,112 genscan,118 ncbiRefSeq,18 ncbiRefSeqCurated,16 ncbiRefSeqGenomicDiff,15 ncbiRefSeqOther,18 ncbiRefSeqPredicted,14 ncbiRefSeqPsl,10 refGene,14 refGene,195 refGene,224 refSeqComposite,10 refSeqComposite,829 refSeqComposite,858 tRNAs,12 tRNAs,78 tRNAs,295 transMapEnsemblV5,13 transMapEstV5,11 transMapRefSeqV5,12 transMapRnaV5,12 transMapV5,10 unipAliSwissprot,21 unipAliTrembl,13 unipChain,11 unipConflict,9 unipDisulfBond,9 unipDomain,7 unipInterest,9 unipLocCytopl,8 unipLocExtra,8 unipLocSignal,9 unipLocTransMemb,8 unipModif,10 unipMut,9 unipOther,9 unipRepeat,7 unipStruct,11 uniprot,10 xenoRefGene,9 xenoRefGene,155 xenoRefGene,184 prepared HLTOGAannotvHg38v1,318 gc5Base,80 ucscToINSDC,49 uniprot,712 present HLTOGAannotvHg38v1,152 HLTOGAannotvHg38v1,172 HLTOGAannotvHg38v1,219 HLTOGAannotvHg38v1,278 cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5Base,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous ensGene,132 refSeqComposite,1220 refSeqComposite,1335 refSeqComposite,1690 uniprot,1654 previously chainCavPor3,918 chainHg19,909 chainMm10,909 chainMm39,909 chainMonDom5,909 chainNetCavPor3,921 chainNetHg19,911 chainNetMm10,911 chainNetMm39,912 chainNetMonDom5,912 chainNetRn6,915 chainRn6,912 netCavPor3,918 netHg19,909 netMm10,909 netMm39,909 netMonDom5,909 netRn6,912 refSeqComposite,500 primary tRNAs,73 tRNAs,234 unipStruct,4 uniprot,360 primed est,492 intronEst,573 primer est,479 intronEst,560 priming est,575 intronEst,656 principal gap,68 pringle transMapEnsemblV5,792 transMapEstV5,761 transMapRefSeqV5,761 transMapRnaV5,761 transMapV5,867 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 probably tRNAs,151 tRNAs,189 problem uniprot,1359 uniprot,1389 proc chainCavPor3,1072 chainHg19,1063 chainMm10,1063 chainMm39,1063 chainMonDom5,1063 chainNetCavPor3,1075 chainNetHg19,1065 chainNetMm10,1065 chainNetMm39,1066 chainNetMonDom5,1066 chainNetRn6,1069 chainRn6,1066 netCavPor3,1072 netHg19,1063 netMm10,1063 netMm39,1063 netMonDom5,1063 netRn6,1066 procedure uniprot,990 process chainCavPor3,822 chainHg19,813 chainMm10,813 chainMm39,813 chainMonDom5,813 chainNetCavPor3,825 chainNetHg19,815 chainNetMm10,815 chainNetMm39,816 chainNetMonDom5,816 chainNetRn6,819 chainRn6,816 gap,122 netCavPor3,822 netHg19,813 netMm10,813 netMm39,813 netMonDom5,813 netRn6,816 refSeqComposite,647 uniprot,321 uniprot,879 uniprot,905 uniprot,1229 uniprot,1448 processed HLTOGAannotvHg38v1,97 chainCavPor3,217 chainHg19,212 chainMm10,212 chainMm39,212 chainMonDom5,212 chainNetCavPor3,220 chainNetHg19,214 chainNetMm10,214 chainNetMm39,215 chainNetMonDom5,215 chainNetRn6,217 chainRn6,214 netCavPor3,217 netHg19,212 netMm10,212 netMm39,212 netMonDom5,212 netRn6,214 processing geneid,30 geneid,149 refSeqComposite,1333 produce blastHg18KG,188 produced est,725 intronEst,809 mrna,442 refGene,321 refSeqComposite,383 refSeqComposite,1710 transMapEnsemblV5,22 transMapEnsemblV5,677 transMapEnsemblV5,701 transMapEstV5,20 transMapEstV5,646 transMapEstV5,670 transMapRefSeqV5,20 transMapRefSeqV5,646 transMapRefSeqV5,670 transMapRnaV5,20 transMapRnaV5,646 transMapRnaV5,670 transMapV5,19 transMapV5,141 transMapV5,752 transMapV5,776 xenoMrna,81 xenoMrna,517 xenoRefGene,281 produces refSeqComposite,48 products unipChain,5 program augustusGene,21 augustusGene,257 blastHg18KG,55 blastHg18KG,79 chainCavPor3,613 chainCavPor3,654 chainCavPor3,792 chainCavPor3,845 chainCavPor3,877 chainCavPor3,953 chainCavPor3,956 chainHg19,605 chainHg19,645 chainHg19,783 chainHg19,836 chainHg19,868 chainHg19,944 chainHg19,947 chainMm10,605 chainMm10,645 chainMm10,783 chainMm10,836 chainMm10,868 chainMm10,944 chainMm10,947 chainMm39,605 chainMm39,645 chainMm39,783 chainMm39,836 chainMm39,868 chainMm39,944 chainMm39,947 chainMonDom5,605 chainMonDom5,645 chainMonDom5,783 chainMonDom5,836 chainMonDom5,868 chainMonDom5,944 chainMonDom5,947 chainNetCavPor3,616 chainNetCavPor3,657 chainNetCavPor3,795 chainNetCavPor3,848 chainNetCavPor3,880 chainNetCavPor3,956 chainNetCavPor3,959 chainNetHg19,607 chainNetHg19,647 chainNetHg19,785 chainNetHg19,838 chainNetHg19,870 chainNetHg19,946 chainNetHg19,949 chainNetMm10,607 chainNetMm10,647 chainNetMm10,785 chainNetMm10,838 chainNetMm10,870 chainNetMm10,946 chainNetMm10,949 chainNetMm39,608 chainNetMm39,648 chainNetMm39,786 chainNetMm39,839 chainNetMm39,871 chainNetMm39,947 chainNetMm39,950 chainNetMonDom5,608 chainNetMonDom5,648 chainNetMonDom5,786 chainNetMonDom5,839 chainNetMonDom5,871 chainNetMonDom5,947 chainNetMonDom5,950 chainNetRn6,611 chainNetRn6,651 chainNetRn6,789 chainNetRn6,842 chainNetRn6,874 chainNetRn6,950 chainNetRn6,953 chainRn6,608 chainRn6,648 chainRn6,786 chainRn6,839 chainRn6,871 chainRn6,947 chainRn6,950 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 geneid,19 geneid,53 genscan,18 genscan,137 genscan,178 microsat,100 microsat,120 mrna,395 nestedRepeats,30 netCavPor3,613 netCavPor3,654 netCavPor3,792 netCavPor3,845 netCavPor3,877 netCavPor3,953 netCavPor3,956 netHg19,605 netHg19,645 netHg19,783 netHg19,836 netHg19,868 netHg19,944 netHg19,947 netMm10,605 netMm10,645 netMm10,783 netMm10,836 netMm10,868 netMm10,944 netMm10,947 netMm39,605 netMm39,645 netMm39,783 netMm39,836 netMm39,868 netMm39,944 netMm39,947 netMonDom5,605 netMonDom5,645 netMonDom5,783 netMonDom5,836 netMonDom5,868 netMonDom5,944 netMonDom5,947 netRn6,608 netRn6,648 netRn6,786 netRn6,839 netRn6,871 netRn6,947 netRn6,950 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 tRNAs,28 tRNAs,53 tRNAs,63 tRNAs,446 transMapEnsemblV5,313 transMapEstV5,282 transMapRefSeqV5,282 transMapRnaV5,282 transMapV5,388 uniprot,1529 programmatic ensGene,99 programmatically refSeqComposite,1319 programs chainCavPor3,1002 chainHg19,993 chainMm10,993 chainMm39,993 chainMonDom5,993 chainNetCavPor3,1005 chainNetHg19,995 chainNetMm10,995 chainNetMm39,996 chainNetMonDom5,996 chainNetRn6,999 chainRn6,996 netCavPor3,1002 netHg19,993 netMm10,993 netMm39,993 netMonDom5,993 netRn6,996 uniprot,1877 project ensGene,194 refGene,338 refSeqComposite,1158 refSeqComposite,1725 xenoRefGene,298 projected uniprot,800 projection transMapEnsemblV5,57 transMapEnsemblV5,320 transMapEstV5,289 transMapRefSeqV5,289 transMapRnaV5,289 transMapV5,395 projects est,569 est,588 est,618 intronEst,650 intronEst,669 intronEst,699 transMapEnsemblV5,709 transMapEstV5,678 transMapRefSeqV5,678 transMapRnaV5,678 transMapV5,784 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 pronounced uniprot,1392 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 properties refSeqComposite,718 prot.bed uniprot,1931 uniprot,1933 protein HLTOGAannotvHg38v1,270 HLTOGAannotvHg38v1,293 HLTOGAannotvHg38v1,308 HLTOGAannotvHg38v1,311 blastHg18KG,111 blastHg18KG,130 refSeqComposite,268 refSeqComposite,361 unipChain,4 unipStruct,3 uniprot,5 uniprot,15 uniprot,84 uniprot,95 uniprot,111 uniprot,113 uniprot,137 uniprot,153 uniprot,194 uniprot,196 uniprot,252 uniprot,256 uniprot,267 uniprot,278 uniprot,293 uniprot,324 uniprot,359 uniprot,635 uniprot,672 uniprot,742 uniprot,760 uniprot,780 uniprot,790 uniprot,906 uniprot,916 uniprot,954 uniprot,966 uniprot,970 uniprot,1020 uniprot,1037 uniprot,1072 uniprot,1099 uniprot,1218 uniprot,1241 uniprot,1244 uniprot,1333 uniprot,1607 uniprot,1635 uniprot,1854 uniprot,1888 uniprot,1989 uniprot,1994 uniprot,2041 xenoMrna,80 xenoMrna,113 protein-coding augustusGene,73 refGene,23 refGene,237 refSeqComposite,20 refSeqComposite,236 refSeqComposite,539 xenoRefGene,15 xenoRefGene,197 protein-genome uniprot,875 uniprot,1174 protein-protein uniprot,315 protein-to-genome uniprot,1703 proteins HLTOGAannotvHg38v1,163 HLTOGAannotvHg38v1,193 blastHg18KG,2 blastHg18KG,4 blastHg18KG,39 refGene,419 refSeqComposite,1806 unipAliSwissprot,7 unipAliTrembl,7 uniprot,243 uniprot,744 uniprot,925 uniprot,929 uniprot,1005 uniprot,1188 uniprot,1364 uniprot,1385 uniprot,1404 uniprot,1470 xenoRefGene,378 protoc geneid,168 protocadherin refSeqComposite,416 provide uniprot,1860 provided quality,89 refSeqComposite,37 refSeqComposite,68 refSeqComposite,205 refSeqComposite,443 tRNAs,318 uniprot,817 provides HLTOGAannotvHg38v1,298 uniprot,489 providing augustusGene,254 ensGene,153 geneid,151 genscan,175 nestedRepeats,312 rmsk,335 provisional refGene,110 refSeqComposite,617 refSeqComposite,666 xenoRefGene,70 pruitt refGene,358 refGene,400 refSeqComposite,1745 refSeqComposite,1787 xenoRefGene,317 xenoRefGene,359 pseudo tRNAs,290 pseudogenes HLTOGAannotvHg38v1,98 chainCavPor3,218 chainCavPor3,232 chainHg19,213 chainHg19,227 chainMm10,213 chainMm10,227 chainMm39,213 chainMm39,227 chainMonDom5,213 chainMonDom5,227 chainNetCavPor3,221 chainNetCavPor3,235 chainNetHg19,215 chainNetHg19,229 chainNetMm10,215 chainNetMm10,229 chainNetMm39,216 chainNetMm39,230 chainNetMonDom5,216 chainNetMonDom5,230 chainNetRn6,218 chainNetRn6,232 chainRn6,215 chainRn6,229 netCavPor3,218 netCavPor3,232 netHg19,213 netHg19,227 netMm10,213 netMm10,227 netMm39,213 netMm39,227 netMonDom5,213 netMonDom5,227 netRn6,215 netRn6,229 refSeqComposite,408 tRNAs,299 uniprot,1184 psl est,54 intronEst,138 mrna,35 refSeqComposite,453 refSeqComposite,1175 refSeqComposite,1416 transMapEnsemblV5,102 transMapEstV5,71 transMapRefSeqV5,71 transMapRnaV5,71 transMapV5,177 uniprot,1479 xenoMrna,40 pslcdnafilter transMapEnsemblV5,351 transMapEstV5,320 transMapRefSeqV5,320 transMapRnaV5,320 transMapV5,426 pslmap transMapEnsemblV5,312 transMapEstV5,281 transMapRefSeqV5,281 transMapRnaV5,281 transMapV5,387 uniprot,889 uniprot,1497 uniprot,1528 uniprot,1880 uniprot,1900 pslreps uniprot,1482 uniprot,1502 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 ensGene,114 est,736 intronEst,820 mrna,453 refSeqComposite,1322 refSeqComposite,1625 transMapEnsemblV5,693 transMapEstV5,662 transMapRefSeqV5,662 transMapRnaV5,662 transMapV5,768 uniprot,709 xenoMrna,528 publications refSeqComposite,253 refSeqComposite,423 uniprot,38 publicly nestedRepeats,275 pull-down refGene,211 refSeqComposite,845 xenoRefGene,171 purpose simpleRepeat,32 putative blastHg18KG,82 pwas geneid,87 q uniprot,1904 uniprot,1914 q99697 uniprot,1926 qgap chainCavPor3,726 chainHg19,717 chainMm10,717 chainMm39,717 chainMonDom5,717 chainNetCavPor3,729 chainNetHg19,719 chainNetMm10,719 chainNetMm39,720 chainNetMonDom5,720 chainNetRn6,723 chainRn6,720 netCavPor3,726 netHg19,717 netMm10,717 netMm39,717 netMonDom5,717 netRn6,720 quality est,72 mrna,53 quality,1 quality,5 quality,12 quality,18 quality,36 quality,86 xenoMrna,58 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 ensGene,105 transMapEnsemblV5,560 transMapEstV5,529 transMapRefSeqV5,529 transMapRnaV5,529 transMapV5,635 query HLTOGAannotvHg38v1,70 HLTOGAannotvHg38v1,126 HLTOGAannotvHg38v1,175 HLTOGAannotvHg38v1,222 blastHg18KG,110 blastHg18KG,122 rmsk,47 rmsk,61 uniprot,1484 xenoMrna,76 questions refSeqComposite,1689 uniprot,1834 quickly mrna,338 refGene,190 refSeqComposite,824 transMapEnsemblV5,122 transMapEstV5,91 transMapRefSeqV5,91 transMapRnaV5,91 transMapV5,197 xenoMrna,413 xenoRefGene,150 quite simpleRepeat,45 quot chainCavPor3,28 chainCavPor3,30 chainCavPor3,35 chainCavPor3,37 chainCavPor3,105 chainCavPor3,107 chainCavPor3,235 chainCavPor3,237 chainCavPor3,239 chainCavPor3,241 chainCavPor3,345 chainCavPor3,347 chainCavPor3,688 chainCavPor3,690 chainHg19,26 chainHg19,28 chainHg19,33 chainHg19,35 chainHg19,101 chainHg19,103 chainHg19,230 chainHg19,232 chainHg19,234 chainHg19,236 chainHg19,338 chainHg19,340 chainHg19,679 chainHg19,681 chainMm10,26 chainMm10,28 chainMm10,33 chainMm10,35 chainMm10,101 chainMm10,103 chainMm10,230 chainMm10,232 chainMm10,234 chainMm10,236 chainMm10,338 chainMm10,340 chainMm10,679 chainMm10,681 chainMm39,26 chainMm39,28 chainMm39,33 chainMm39,35 chainMm39,101 chainMm39,103 chainMm39,230 chainMm39,232 chainMm39,234 chainMm39,236 chainMm39,338 chainMm39,340 chainMm39,679 chainMm39,681 chainMonDom5,26 chainMonDom5,28 chainMonDom5,33 chainMonDom5,35 chainMonDom5,101 chainMonDom5,103 chainMonDom5,230 chainMonDom5,232 chainMonDom5,234 chainMonDom5,236 chainMonDom5,338 chainMonDom5,340 chainMonDom5,679 chainMonDom5,681 chainNetCavPor3,31 chainNetCavPor3,33 chainNetCavPor3,38 chainNetCavPor3,40 chainNetCavPor3,108 chainNetCavPor3,110 chainNetCavPor3,238 chainNetCavPor3,240 chainNetCavPor3,242 chainNetCavPor3,244 chainNetCavPor3,348 chainNetCavPor3,350 chainNetCavPor3,691 chainNetCavPor3,693 chainNetHg19,28 chainNetHg19,30 chainNetHg19,35 chainNetHg19,37 chainNetHg19,103 chainNetHg19,105 chainNetHg19,232 chainNetHg19,234 chainNetHg19,236 chainNetHg19,238 chainNetHg19,340 chainNetHg19,342 chainNetHg19,681 chainNetHg19,683 chainNetMm10,28 chainNetMm10,30 chainNetMm10,35 chainNetMm10,37 chainNetMm10,103 chainNetMm10,105 chainNetMm10,232 chainNetMm10,234 chainNetMm10,236 chainNetMm10,238 chainNetMm10,340 chainNetMm10,342 chainNetMm10,681 chainNetMm10,683 chainNetMm39,29 chainNetMm39,31 chainNetMm39,36 chainNetMm39,38 chainNetMm39,104 chainNetMm39,106 chainNetMm39,233 chainNetMm39,235 chainNetMm39,237 chainNetMm39,239 chainNetMm39,341 chainNetMm39,343 chainNetMm39,682 chainNetMm39,684 chainNetMonDom5,29 chainNetMonDom5,31 chainNetMonDom5,36 chainNetMonDom5,38 chainNetMonDom5,104 chainNetMonDom5,106 chainNetMonDom5,233 chainNetMonDom5,235 chainNetMonDom5,237 chainNetMonDom5,239 chainNetMonDom5,341 chainNetMonDom5,343 chainNetMonDom5,682 chainNetMonDom5,684 chainNetRn6,30 chainNetRn6,32 chainNetRn6,37 chainNetRn6,39 chainNetRn6,106 chainNetRn6,108 chainNetRn6,235 chainNetRn6,237 chainNetRn6,239 chainNetRn6,241 chainNetRn6,344 chainNetRn6,346 chainNetRn6,685 chainNetRn6,687 chainRn6,27 chainRn6,29 chainRn6,34 chainRn6,36 chainRn6,103 chainRn6,105 chainRn6,232 chainRn6,234 chainRn6,236 chainRn6,238 chainRn6,341 chainRn6,343 chainRn6,682 chainRn6,684 est,238 est,240 est,289 est,291 est,305 est,307 est,341 est,343 est,358 est,360 gc5Base,58 gc5Base,62 gold,36 gold,38 gold,134 gold,136 gold,149 gold,151 intronEst,319 intronEst,321 intronEst,370 intronEst,372 intronEst,386 intronEst,388 intronEst,422 intronEst,424 intronEst,439 intronEst,441 mrna,184 mrna,186 mrna,235 mrna,237 mrna,251 mrna,253 mrna,287 mrna,289 mrna,304 mrna,306 netCavPor3,28 netCavPor3,30 netCavPor3,35 netCavPor3,37 netCavPor3,105 netCavPor3,107 netCavPor3,235 netCavPor3,237 netCavPor3,239 netCavPor3,241 netCavPor3,345 netCavPor3,347 netCavPor3,688 netCavPor3,690 netHg19,26 netHg19,28 netHg19,33 netHg19,35 netHg19,101 netHg19,103 netHg19,230 netHg19,232 netHg19,234 netHg19,236 netHg19,338 netHg19,340 netHg19,679 netHg19,681 netMm10,26 netMm10,28 netMm10,33 netMm10,35 netMm10,101 netMm10,103 netMm10,230 netMm10,232 netMm10,234 netMm10,236 netMm10,338 netMm10,340 netMm10,679 netMm10,681 netMm39,26 netMm39,28 netMm39,33 netMm39,35 netMm39,101 netMm39,103 netMm39,230 netMm39,232 netMm39,234 netMm39,236 netMm39,338 netMm39,340 netMm39,679 netMm39,681 netMonDom5,26 netMonDom5,28 netMonDom5,33 netMonDom5,35 netMonDom5,101 netMonDom5,103 netMonDom5,230 netMonDom5,232 netMonDom5,234 netMonDom5,236 netMonDom5,338 netMonDom5,340 netMonDom5,679 netMonDom5,681 netRn6,27 netRn6,29 netRn6,34 netRn6,36 netRn6,103 netRn6,105 netRn6,232 netRn6,234 netRn6,236 netRn6,238 netRn6,341 netRn6,343 netRn6,682 netRn6,684 refSeqComposite,504 refSeqComposite,507 refSeqComposite,1430 refSeqComposite,1432 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 tRNAs,205 tRNAs,207 tRNAs,289 tRNAs,291 uniprot,63 uniprot,66 uniprot,261 uniprot,263 uniprot,272 uniprot,274 uniprot,283 uniprot,285 uniprot,412 uniprot,416 uniprot,423 uniprot,426 uniprot,431 uniprot,435 uniprot,437 uniprot,441 uniprot,468 uniprot,470 uniprot,471 uniprot,474 uniprot,475 uniprot,478 uniprot,572 uniprot,575 xenoMrna,259 xenoMrna,261 xenoMrna,310 xenoMrna,312 xenoMrna,326 xenoMrna,328 xenoMrna,362 xenoMrna,364 xenoMrna,379 xenoMrna,381 r augustusGene,291 chainCavPor3,1052 chainCavPor3,1098 chainHg19,1043 chainHg19,1089 chainMm10,1043 chainMm10,1089 chainMm39,1043 chainMm39,1089 chainMonDom5,1043 chainMonDom5,1089 chainNetCavPor3,1055 chainNetCavPor3,1101 chainNetHg19,1045 chainNetHg19,1091 chainNetMm10,1045 chainNetMm10,1091 chainNetMm39,1046 chainNetMm39,1092 chainNetMonDom5,1046 chainNetMonDom5,1092 chainNetRn6,1049 chainNetRn6,1095 chainRn6,1046 chainRn6,1092 geneid,161 geneid,184 nestedRepeats,327 netCavPor3,1052 netCavPor3,1098 netHg19,1043 netHg19,1089 netMm10,1043 netMm10,1089 netMm39,1043 netMm39,1089 netMonDom5,1043 netMonDom5,1089 netRn6,1046 netRn6,1092 rmsk,350 tRNAs,397 transMapEnsemblV5,759 transMapEstV5,728 transMapRefSeqV5,728 transMapRnaV5,728 transMapV5,834 r.s chainCavPor3,1017 chainHg19,1008 chainMm10,1008 chainMm39,1008 chainMonDom5,1008 chainNetCavPor3,1020 chainNetHg19,1010 chainNetMm10,1010 chainNetMm39,1011 chainNetMonDom5,1011 chainNetRn6,1014 chainRn6,1011 netCavPor3,1017 netHg19,1008 netMm10,1008 netMm39,1008 netMonDom5,1008 netRn6,1011 rabbit blastHg18KG,74 blastHg18KG,83 chainCavPor3,75 chainCavPor3,102 chainCavPor3,160 chainCavPor3,206 chainCavPor3,273 chainCavPor3,280 chainCavPor3,581 chainCavPor3,634 chainHg19,72 chainHg19,98 chainHg19,155 chainHg19,201 chainHg19,267 chainHg19,274 chainHg19,573 chainHg19,625 chainMm10,72 chainMm10,98 chainMm10,155 chainMm10,201 chainMm10,267 chainMm10,274 chainMm10,573 chainMm10,625 chainMm39,72 chainMm39,98 chainMm39,155 chainMm39,201 chainMm39,267 chainMm39,274 chainMm39,573 chainMm39,625 chainMonDom5,72 chainMonDom5,98 chainMonDom5,155 chainMonDom5,201 chainMonDom5,267 chainMonDom5,274 chainMonDom5,573 chainMonDom5,625 chainNetCavPor3,78 chainNetCavPor3,105 chainNetCavPor3,163 chainNetCavPor3,209 chainNetCavPor3,276 chainNetCavPor3,283 chainNetCavPor3,584 chainNetCavPor3,637 chainNetHg19,74 chainNetHg19,100 chainNetHg19,157 chainNetHg19,203 chainNetHg19,269 chainNetHg19,276 chainNetHg19,575 chainNetHg19,627 chainNetMm10,74 chainNetMm10,100 chainNetMm10,157 chainNetMm10,203 chainNetMm10,269 chainNetMm10,276 chainNetMm10,575 chainNetMm10,627 chainNetMm39,75 chainNetMm39,101 chainNetMm39,158 chainNetMm39,204 chainNetMm39,270 chainNetMm39,277 chainNetMm39,576 chainNetMm39,628 chainNetMonDom5,75 chainNetMonDom5,101 chainNetMonDom5,158 chainNetMonDom5,204 chainNetMonDom5,270 chainNetMonDom5,277 chainNetMonDom5,576 chainNetMonDom5,628 chainNetRn6,77 chainNetRn6,103 chainNetRn6,160 chainNetRn6,206 chainNetRn6,272 chainNetRn6,279 chainNetRn6,579 chainNetRn6,631 chainRn6,74 chainRn6,100 chainRn6,157 chainRn6,203 chainRn6,269 chainRn6,276 chainRn6,576 chainRn6,628 ctgPos2,23 est,1 est,3 est,16 est,643 gold,17 intronEst,3 intronEst,18 intronEst,124 intronEst,724 mrna,1 mrna,3 mrna,17 mrna,385 netCavPor3,75 netCavPor3,102 netCavPor3,160 netCavPor3,206 netCavPor3,273 netCavPor3,280 netCavPor3,581 netCavPor3,634 netHg19,72 netHg19,98 netHg19,155 netHg19,201 netHg19,267 netHg19,274 netHg19,573 netHg19,625 netMm10,72 netMm10,98 netMm10,155 netMm10,201 netMm10,267 netMm10,274 netMm10,573 netMm10,625 netMm39,72 netMm39,98 netMm39,155 netMm39,201 netMm39,267 netMm39,274 netMm39,573 netMm39,625 netMonDom5,72 netMonDom5,98 netMonDom5,155 netMonDom5,201 netMonDom5,267 netMonDom5,274 netMonDom5,573 netMonDom5,625 netRn6,74 netRn6,100 netRn6,157 netRn6,203 netRn6,269 netRn6,276 netRn6,576 netRn6,628 quality,3 quality,94 refGene,22 refGene,262 refSeqComposite,19 refSeqComposite,441 refSeqComposite,462 refSeqComposite,495 refSeqComposite,1230 transMapEnsemblV5,90 transMapEnsemblV5,202 transMapEnsemblV5,332 transMapEstV5,59 transMapEstV5,171 transMapEstV5,301 transMapRefSeqV5,59 transMapRefSeqV5,171 transMapRefSeqV5,301 transMapRnaV5,59 transMapRnaV5,171 transMapRnaV5,301 transMapV5,60 transMapV5,277 transMapV5,407 xenoMrna,28 xenoMrna,465 xenoRefGene,23 xenoRefGene,222 random augustusGene,119 est,571 intronEst,652 random-primed est,617 intronEst,698 raney blastHg18KG,198 uniprot,1960 range nestedRepeats,227 nestedRepeats,236 quality,46 refSeqComposite,984 tRNAs,260 transMapEnsemblV5,655 transMapEstV5,624 transMapRefSeqV5,624 transMapRnaV5,624 transMapV5,730 uniprot,1809 ranked chainCavPor3,789 chainHg19,780 chainMm10,780 chainMm39,780 chainMonDom5,780 chainNetCavPor3,792 chainNetHg19,782 chainNetMm10,782 chainNetMm39,783 chainNetMonDom5,783 chainNetRn6,786 chainRn6,783 netCavPor3,789 netHg19,780 netMm10,780 netMm39,780 netMonDom5,780 netRn6,783 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rat chainNetRn6,1 chainNetRn6,4 chainNetRn6,69 chainNetRn6,101 chainNetRn6,153 chainNetRn6,271 chainNetRn6,296 chainNetRn6,578 chainNetRn6,626 chainNetRn6Viewchain,2 chainNetRn6Viewnet,2 chainRn6,1 chainRn6,3 chainRn6,66 chainRn6,98 chainRn6,150 chainRn6,268 chainRn6,293 chainRn6,575 chainRn6,623 netRn6,1 netRn6,3 netRn6,66 netRn6,98 netRn6,150 netRn6,268 netRn6,293 netRn6,575 netRn6,623 rate tRNAs,89 rather est,572 intronEst,653 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 geneid,112 raw refSeqComposite,1288 transMapEnsemblV5,518 transMapEstV5,487 transMapRefSeqV5,487 transMapRnaV5,487 transMapV5,593 uniprot,1708 rc chainCavPor3,1100 chainHg19,1091 chainMm10,1091 chainMm39,1091 chainMonDom5,1091 chainNetCavPor3,1103 chainNetHg19,1093 chainNetMm10,1093 chainNetMm39,1094 chainNetMonDom5,1094 chainNetRn6,1097 chainRn6,1094 netCavPor3,1100 netHg19,1091 netMm10,1091 netMm39,1091 netMonDom5,1091 netRn6,1094 rmsk,200 read est,470 gap,42 gap,133 gold,54 intronEst,551 refSeqComposite,1457 reads gap,105 gap,125 gold,21 realigning refSeqComposite,50 realignment refSeqComposite,58 refSeqComposite,485 rearrangement chainCavPor3,295 chainCavPor3,499 chainCavPor3,1065 chainHg19,289 chainHg19,492 chainHg19,1056 chainMm10,289 chainMm10,492 chainMm10,1056 chainMm39,289 chainMm39,492 chainMm39,1056 chainMonDom5,289 chainMonDom5,492 chainMonDom5,1056 chainNetCavPor3,298 chainNetCavPor3,502 chainNetCavPor3,1068 chainNetHg19,291 chainNetHg19,494 chainNetHg19,1058 chainNetMm10,291 chainNetMm10,494 chainNetMm10,1058 chainNetMm39,292 chainNetMm39,495 chainNetMm39,1059 chainNetMonDom5,292 chainNetMonDom5,495 chainNetMonDom5,1059 chainNetRn6,294 chainNetRn6,498 chainNetRn6,1062 chainRn6,291 chainRn6,495 chainRn6,1059 netCavPor3,295 netCavPor3,499 netCavPor3,1065 netHg19,289 netHg19,492 netHg19,1056 netMm10,289 netMm10,492 netMm10,1056 netMm39,289 netMm39,492 netMm39,1056 netMonDom5,289 netMonDom5,492 netMonDom5,1056 netRn6,291 netRn6,495 netRn6,1059 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably est,538 est,561 intronEst,619 intronEst,642 recently uniprot,1186 reciprocal transMapEnsemblV5,239 transMapEstV5,208 transMapRefSeqV5,208 transMapRnaV5,208 transMapV5,65 transMapV5,314 record refGene,105 refSeqComposite,612 refSeqComposite,633 refSeqComposite,669 refSeqComposite,694 refSeqComposite,709 uniprot,496 xenoRefGene,65 records refGene,68 refSeqComposite,127 refSeqComposite,658 reduced intronEst,104 refer ensGene,42 genscan,144 refSeqComposite,1682 uniprot,1827 reference HLTOGAannotvHg38v1,10 HLTOGAannotvHg38v1,51 HLTOGAannotvHg38v1,68 HLTOGAannotvHg38v1,117 ncbiRefSeqGenomicDiff,10 refGene,32 refGene,51 refGene,385 refGene,407 refSeqComposite,29 refSeqComposite,110 refSeqComposite,463 refSeqComposite,876 refSeqComposite,1086 refSeqComposite,1772 refSeqComposite,1794 uniprot,1378 uniprot,1422 xenoRefGene,29 xenoRefGene,344 xenoRefGene,366 references HLTOGAannotvHg38v1,324 augustusGene,285 chainCavPor3,1015 chainHg19,1006 chainMm10,1006 chainMm39,1006 chainMonDom5,1006 chainNetCavPor3,1018 chainNetHg19,1008 chainNetMm10,1008 chainNetMm39,1009 chainNetMonDom5,1009 chainNetRn6,1012 chainRn6,1009 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 ensGene,52 ensGene,167 est,742 geneid,154 genscan,152 genscan,179 intronEst,826 microsat,113 mrna,459 nestedRepeats,66 nestedRepeats,323 netCavPor3,1015 netHg19,1006 netMm10,1006 netMm39,1006 netMonDom5,1006 netRn6,1009 refGene,339 refSeqComposite,1726 rmsk,102 rmsk,346 simpleRepeat,73 tRNAs,354 transMapEnsemblV5,710 transMapEstV5,679 transMapRefSeqV5,679 transMapRnaV5,679 transMapV5,785 uniprot,1984 xenoMrna,534 xenoRefGene,299 refgene refSeqComposite,1415 transMapEnsemblV5,592 transMapEstV5,561 transMapRefSeqV5,2 transMapRefSeqV5,561 transMapRnaV5,561 transMapV5,667 reflect quality,49 reflects rmsk,213 refseq ncbiRefSeq,1 ncbiRefSeq,4 ncbiRefSeqCurated,1 ncbiRefSeqCurated,4 ncbiRefSeqGenomicDiff,1 ncbiRefSeqGenomicDiff,6 ncbiRefSeqOther,1 ncbiRefSeqOther,4 ncbiRefSeqPredicted,1 ncbiRefSeqPredicted,4 ncbiRefSeqPsl,1 ncbiRefSeqPsl,3 refGene,2 refGene,6 refGene,17 refGene,35 refGene,53 refGene,67 refGene,104 refGene,256 refGene,337 refGene,380 refGene,409 refSeqComposite,2 refSeqComposite,3 refSeqComposite,14 refSeqComposite,32 refSeqComposite,39 refSeqComposite,44 refSeqComposite,52 refSeqComposite,83 refSeqComposite,86 refSeqComposite,112 refSeqComposite,126 refSeqComposite,188 refSeqComposite,195 refSeqComposite,197 refSeqComposite,207 refSeqComposite,208 refSeqComposite,213 refSeqComposite,313 refSeqComposite,334 refSeqComposite,338 refSeqComposite,343 refSeqComposite,377 refSeqComposite,386 refSeqComposite,398 refSeqComposite,402 refSeqComposite,432 refSeqComposite,437 refSeqComposite,446 refSeqComposite,455 refSeqComposite,467 refSeqComposite,478 refSeqComposite,505 refSeqComposite,509 refSeqComposite,518 refSeqComposite,526 refSeqComposite,543 refSeqComposite,545 refSeqComposite,551 refSeqComposite,578 refSeqComposite,584 refSeqComposite,586 refSeqComposite,588 refSeqComposite,592 refSeqComposite,611 refSeqComposite,625 refSeqComposite,632 refSeqComposite,657 refSeqComposite,668 refSeqComposite,693 refSeqComposite,708 refSeqComposite,865 refSeqComposite,881 refSeqComposite,1092 refSeqComposite,1112 refSeqComposite,1127 refSeqComposite,1141 refSeqComposite,1144 refSeqComposite,1157 refSeqComposite,1164 refSeqComposite,1195 refSeqComposite,1205 refSeqComposite,1210 refSeqComposite,1221 refSeqComposite,1224 refSeqComposite,1352 refSeqComposite,1366 refSeqComposite,1369 refSeqComposite,1404 refSeqComposite,1407 refSeqComposite,1410 refSeqComposite,1414 refSeqComposite,1418 refSeqComposite,1568 refSeqComposite,1665 refSeqComposite,1667 refSeqComposite,1670 refSeqComposite,1724 refSeqComposite,1767 refSeqComposite,1796 transMapEnsemblV5,169 transMapEnsemblV5,704 transMapEstV5,138 transMapEstV5,673 transMapRefSeqV5,4 transMapRefSeqV5,17 transMapRefSeqV5,138 transMapRefSeqV5,673 transMapRnaV5,138 transMapRnaV5,673 transMapV5,244 transMapV5,779 uniprot,823 uniprot,828 uniprot,841 uniprot,845 uniprot,857 uniprot,864 uniprot,1002 uniprot,1010 uniprot,1055 uniprot,1207 uniprot,1236 uniprot,1276 uniprot,1290 xenoRefGene,2 xenoRefGene,4 xenoRefGene,32 xenoRefGene,64 xenoRefGene,297 xenoRefGene,339 xenoRefGene,368 refseqdiffs refSeqComposite,1471 refseqother refSeqComposite,1469 regeneron uniprot,1968 region chainCavPor3,203 chainCavPor3,402 chainHg19,198 chainHg19,395 chainMm10,198 chainMm10,395 chainMm39,198 chainMm39,395 chainMonDom5,198 chainMonDom5,395 chainNetCavPor3,206 chainNetCavPor3,405 chainNetHg19,200 chainNetHg19,397 chainNetMm10,200 chainNetMm10,397 chainNetMm39,201 chainNetMm39,398 chainNetMonDom5,201 chainNetMonDom5,398 chainNetRn6,203 chainNetRn6,401 chainRn6,200 chainRn6,398 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netCavPor3,203 netCavPor3,402 netHg19,198 netHg19,395 netMm10,198 netMm10,395 netMm39,198 netMm39,395 netMonDom5,198 netMonDom5,395 netRn6,200 netRn6,398 refSeqComposite,987 refSeqComposite,1538 uniprot,312 regions HLTOGAannotvHg38v1,85 augustusGene,76 chainCavPor3,18 chainCavPor3,138 chainCavPor3,288 chainHg19,16 chainHg19,134 chainHg19,282 chainMm10,16 chainMm10,134 chainMm10,282 chainMm39,16 chainMm39,134 chainMm39,282 chainMonDom5,16 chainMonDom5,134 chainMonDom5,282 chainNetCavPor3,21 chainNetCavPor3,141 chainNetCavPor3,291 chainNetHg19,18 chainNetHg19,136 chainNetHg19,284 chainNetMm10,18 chainNetMm10,136 chainNetMm10,284 chainNetMm39,19 chainNetMm39,137 chainNetMm39,285 chainNetMonDom5,19 chainNetMonDom5,137 chainNetMonDom5,285 chainNetRn6,20 chainNetRn6,139 chainNetRn6,287 chainRn6,17 chainRn6,136 chainRn6,284 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 genscan,48 microsat,14 netCavPor3,18 netCavPor3,138 netCavPor3,288 netHg19,16 netHg19,134 netHg19,282 netMm10,16 netMm10,134 netMm10,282 netMm39,16 netMm39,134 netMm39,282 netMonDom5,16 netMonDom5,134 netMonDom5,282 netRn6,17 netRn6,136 netRn6,284 refSeqComposite,1491 simpleRepeat,39 tRNAs,499 transMapEnsemblV5,301 transMapEnsemblV5,601 transMapEstV5,270 transMapEstV5,570 transMapRefSeqV5,270 transMapRefSeqV5,570 transMapRnaV5,270 transMapRnaV5,570 transMapV5,376 transMapV5,676 unipInterest,3 uniprot,240 uniprot,297 uniprot,300 uniprot,328 uniprot,348 uniprot,368 uniprot,384 regulaci geneid,39 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 transMapV5,74 uniprot,551 relationship chainCavPor3,855 chainHg19,846 chainMm10,846 chainMm39,846 chainMonDom5,846 chainNetCavPor3,858 chainNetHg19,848 chainNetMm10,848 chainNetMm39,849 chainNetMonDom5,849 chainNetRn6,852 chainRn6,849 est,93 intronEst,174 netCavPor3,855 netHg19,846 netMm10,846 netMm39,846 netMonDom5,846 netRn6,849 relative chainCavPor3,871 chainHg19,862 chainMm10,862 chainMm39,862 chainMonDom5,862 chainNetCavPor3,874 chainNetHg19,864 chainNetMm10,864 chainNetMm39,865 chainNetMonDom5,865 chainNetRn6,868 chainRn6,865 gap,26 gold,99 netCavPor3,871 netHg19,862 netMm10,862 netMm39,862 netMonDom5,862 netRn6,865 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 release refSeqComposite,1114 uniprot,1589 releases uniprot,1561 uniprot,1686 relevant est,157 intronEst,238 mrna,103 uniprot,681 xenoMrna,178 relies HLTOGAannotvHg38v1,78 remain uniprot,1189 remaining blastHg18KG,184 chainCavPor3,694 chainHg19,685 chainMm10,685 chainMm39,685 chainMonDom5,685 chainNetCavPor3,697 chainNetHg19,687 chainNetMm10,687 chainNetMm39,688 chainNetMonDom5,688 chainNetRn6,691 chainRn6,688 netCavPor3,694 netHg19,685 netMm10,685 netMm39,685 netMonDom5,685 netRn6,688 removed chainCavPor3,584 chainHg19,576 chainMm10,576 chainMm39,576 chainMonDom5,576 chainNetCavPor3,587 chainNetHg19,578 chainNetMm10,578 chainNetMm39,579 chainNetMonDom5,579 chainNetRn6,582 chainRn6,579 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netCavPor3,584 netHg19,576 netMm10,576 netMm39,576 netMonDom5,576 netRn6,579 rmsk,279 uniprot,597 uniprot,1150 removes transMapEnsemblV5,306 transMapEstV5,275 transMapRefSeqV5,275 transMapRnaV5,275 transMapV5,381 rendered tRNAs,346 reorganizing uniprot,1987 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeated uniprot,386 uniprot,390 repeating rmsk,2 repeatmasker chainCavPor3,952 chainHg19,943 chainMm10,943 chainMm39,943 chainMonDom5,943 chainNetCavPor3,955 chainNetHg19,945 chainNetMm10,945 chainNetMm39,946 chainNetMonDom5,946 chainNetRn6,949 chainRn6,946 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netCavPor3,952 netHg19,943 netMm10,943 netMm39,943 netMonDom5,943 netRn6,946 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats chainCavPor3,944 chainHg19,935 chainMm10,935 chainMm39,935 chainMonDom5,935 chainNetCavPor3,947 chainNetHg19,937 chainNetMm10,937 chainNetMm39,938 chainNetMonDom5,938 chainNetRn6,941 chainRn6,938 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netCavPor3,944 netHg19,935 netMm10,935 netMm39,935 netMonDom5,935 netRn6,938 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 unipRepeat,1 unipRepeat,3 uniprot,383 uniprot,440 repetitive nestedRepeats,351 refSeqComposite,977 refSeqComposite,1005 rmsk,374 uniprot,1400 reporting refSeqComposite,1089 represent chainCavPor3,136 chainCavPor3,164 chainCavPor3,449 chainCavPor3,454 chainHg19,132 chainHg19,159 chainHg19,442 chainHg19,447 chainMm10,132 chainMm10,159 chainMm10,442 chainMm10,447 chainMm39,132 chainMm39,159 chainMm39,442 chainMm39,447 chainMonDom5,132 chainMonDom5,159 chainMonDom5,442 chainMonDom5,447 chainNetCavPor3,139 chainNetCavPor3,167 chainNetCavPor3,452 chainNetCavPor3,457 chainNetHg19,134 chainNetHg19,161 chainNetHg19,444 chainNetHg19,449 chainNetMm10,134 chainNetMm10,161 chainNetMm10,444 chainNetMm10,449 chainNetMm39,135 chainNetMm39,162 chainNetMm39,445 chainNetMm39,450 chainNetMonDom5,135 chainNetMonDom5,162 chainNetMonDom5,445 chainNetMonDom5,450 chainNetRn6,137 chainNetRn6,164 chainNetRn6,448 chainNetRn6,453 chainRn6,134 chainRn6,161 chainRn6,445 chainRn6,450 est,38 intronEst,50 netCavPor3,136 netCavPor3,164 netCavPor3,449 netCavPor3,454 netHg19,132 netHg19,159 netHg19,442 netHg19,447 netMm10,132 netMm10,159 netMm10,442 netMm10,447 netMm39,132 netMm39,159 netMm39,442 netMm39,447 netMonDom5,132 netMonDom5,159 netMonDom5,442 netMonDom5,447 netRn6,134 netRn6,161 netRn6,445 netRn6,450 tRNAs,80 representation quality,98 representative refSeqComposite,536 represented gap,17 gap,85 gap,149 rmsk,49 representing gap,60 reproducibility uniprot,1645 required refSeqComposite,906 refSeqComposite,920 tRNAs,217 requirements refSeqComposite,393 requiring intronEst,92 res chainCavPor3,1110 chainHg19,1101 chainMm10,1101 chainMm39,1101 chainMonDom5,1101 chainNetCavPor3,1113 chainNetHg19,1103 chainNetMm10,1103 chainNetMm39,1104 chainNetMonDom5,1104 chainNetRn6,1107 chainRn6,1104 ensGene,197 est,760 est,785 est,805 geneid,189 intronEst,844 intronEst,869 intronEst,889 microsat,127 mrna,477 mrna,502 mrna,522 netCavPor3,1110 netHg19,1101 netMm10,1101 netMm39,1101 netMonDom5,1101 netRn6,1104 refGene,348 refGene,389 refGene,422 refSeqComposite,1735 refSeqComposite,1776 refSeqComposite,1809 simpleRepeat,87 tRNAs,383 tRNAs,406 tRNAs,459 tRNAs,502 transMapEnsemblV5,744 transMapEstV5,713 transMapRefSeqV5,713 transMapRnaV5,713 transMapV5,819 uniprot,1999 xenoMrna,552 xenoMrna,577 xenoMrna,597 xenoRefGene,307 xenoRefGene,348 xenoRefGene,381 research nestedRepeats,54 refSeqComposite,1100 rmsk,90 residues uniprot,344 resolve uniprot,1357 resolved uniprot,1284 resource uniprot,1995 uniprot,2033 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 ensGene,108 refSeqComposite,1306 restricted refSeqComposite,577 result chainCavPor3,177 chainHg19,172 chainMm10,172 chainMm39,172 chainMonDom5,172 chainNetCavPor3,180 chainNetHg19,174 chainNetMm10,174 chainNetMm39,175 chainNetMonDom5,175 chainNetRn6,177 chainRn6,174 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netCavPor3,177 netHg19,172 netMm10,172 netMm39,172 netMonDom5,172 netRn6,174 refSeqComposite,60 transMapEnsemblV5,504 transMapEstV5,473 transMapRefSeqV5,473 transMapRnaV5,473 transMapV5,579 uniprot,798 uniprot,1065 uniprot,1170 resulting chainCavPor3,603 chainHg19,595 chainMm10,595 chainMm39,595 chainMonDom5,595 chainNetCavPor3,606 chainNetHg19,597 chainNetMm10,597 chainNetMm39,598 chainNetMonDom5,598 chainNetRn6,601 chainRn6,598 netCavPor3,603 netHg19,595 netMm10,595 netMm39,595 netMonDom5,595 netRn6,598 refSeqComposite,284 transMapEnsemblV5,81 transMapEnsemblV5,334 transMapEnsemblV5,346 transMapEnsemblV5,491 transMapEstV5,50 transMapEstV5,303 transMapEstV5,315 transMapEstV5,460 transMapRefSeqV5,50 transMapRefSeqV5,303 transMapRefSeqV5,315 transMapRefSeqV5,460 transMapRnaV5,50 transMapRnaV5,303 transMapRnaV5,315 transMapRnaV5,460 transMapV5,51 transMapV5,409 transMapV5,421 transMapV5,566 uniprot,874 uniprot,1137 uniprot,1308 results refSeqComposite,1098 uniprot,1463 uniprot,1649 retained uniprot,795 retrieve est,580 intronEst,661 retroposons rmsk,173 reverse est,455 est,489 est,506 intronEst,536 intronEst,570 intronEst,587 review refGene,102 refSeqComposite,609 refSeqComposite,629 refSeqComposite,646 refSeqComposite,677 refSeqComposite,702 xenoRefGene,62 reviewed refGene,112 refSeqComposite,620 refSeqComposite,630 refSeqComposite,636 xenoRefGene,72 reviews refSeqComposite,258 rgsc chainNetRn6,7 chainNetRn6,72 chainNetRn6,307 chainNetRn6Viewchain,5 chainNetRn6Viewnet,5 chainRn6,6 chainRn6,69 chainRn6,304 netRn6,6 netRn6,69 netRn6,304 ribosome tRNAs,157 riestra uniprot,1972 right refSeqComposite,971 rightmost refSeqComposite,1013 rn6 chainNetRn6,9 chainNetRn6,74 chainNetRn6,309 chainNetRn6Viewchain,7 chainNetRn6Viewnet,7 chainRn6,8 chainRn6,71 chainRn6,306 netRn6,8 netRn6,71 netRn6,306 rna est,101 est,449 geneid,29 geneid,148 intronEst,182 intronEst,530 refGene,31 refGene,279 refGene,325 refSeqComposite,28 refSeqComposite,1085 refSeqComposite,1145 refSeqComposite,1206 refSeqComposite,1247 refSeqComposite,1655 rmsk,186 rmsk,189 tRNAs,4 tRNAs,375 tRNAs,398 tRNAs,452 transMapEnsemblV5,595 transMapEstV5,564 transMapRefSeqV5,564 transMapRnaV5,2 transMapRnaV5,5 transMapRnaV5,564 transMapV5,670 xenoRefGene,28 xenoRefGene,239 xenoRefGene,285 rna-seq refSeqComposite,74 refSeqComposite,365 rnas ncbiRefSeqPsl,6 refGene,7 refGene,257 refSeqComposite,53 refSeqComposite,438 refSeqComposite,487 refSeqComposite,1225 xenoRefGene,217 robert chainCavPor3,992 chainHg19,983 chainMm10,983 chainMm39,983 chainMonDom5,983 chainNetCavPor3,995 chainNetHg19,985 chainNetMm10,985 chainNetMm39,986 chainNetMonDom5,986 chainNetRn6,989 chainRn6,986 nestedRepeats,307 netCavPor3,992 netHg19,983 netMm10,983 netMm39,983 netMonDom5,983 netRn6,986 rmsk,330 tRNAs,351 roderic geneid,22 role uniprot,309 rolling rmsk,201 ross chainCavPor3,941 chainHg19,932 chainMm10,932 chainMm39,932 chainMonDom5,932 chainNetCavPor3,944 chainNetHg19,934 chainNetMm10,934 chainNetMm39,935 chainNetMonDom5,935 chainNetRn6,938 chainRn6,935 netCavPor3,941 netHg19,932 netMm10,932 netMm39,932 netMonDom5,932 netRn6,935 rotated tRNAs,327 rough tRNAs,258 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 run chainCavPor3,657 chainHg19,648 chainMm10,648 chainMm39,648 chainMonDom5,648 chainNetCavPor3,660 chainNetHg19,650 chainNetMm10,650 chainNetMm39,651 chainNetMonDom5,651 chainNetRn6,654 chainRn6,651 netCavPor3,657 netHg19,648 netMm10,648 netMm39,648 netMonDom5,648 netRn6,651 refSeqComposite,1605 s augustusGene,104 augustusGene,221 augustusGene,319 blastHg18KG,131 chainCavPor3,1060 chainCavPor3,1077 chainCavPor3,1090 chainHg19,1051 chainHg19,1068 chainHg19,1081 chainMm10,1051 chainMm10,1068 chainMm10,1081 chainMm39,1051 chainMm39,1068 chainMm39,1081 chainMonDom5,1051 chainMonDom5,1068 chainMonDom5,1081 chainNetCavPor3,1063 chainNetCavPor3,1080 chainNetCavPor3,1093 chainNetHg19,1053 chainNetHg19,1070 chainNetHg19,1083 chainNetMm10,1053 chainNetMm10,1070 chainNetMm10,1083 chainNetMm39,1054 chainNetMm39,1071 chainNetMm39,1084 chainNetMonDom5,1054 chainNetMonDom5,1071 chainNetMonDom5,1084 chainNetRn6,1057 chainNetRn6,1074 chainNetRn6,1087 chainRn6,1054 chainRn6,1071 chainRn6,1084 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 geneid,25 genscan,190 genscan,194 genscan,210 nestedRepeats,286 netCavPor3,1060 netCavPor3,1077 netCavPor3,1090 netHg19,1051 netHg19,1068 netHg19,1081 netMm10,1051 netMm10,1068 netMm10,1081 netMm39,1051 netMm39,1068 netMm39,1081 netMonDom5,1051 netMonDom5,1068 netMonDom5,1081 netRn6,1054 netRn6,1071 netRn6,1084 refSeqComposite,105 refSeqComposite,318 refSeqComposite,465 refSeqComposite,484 refSeqComposite,1119 refSeqComposite,1204 rmsk,18 rmsk,293 tRNAs,479 transMapEnsemblV5,729 transMapEstV5,698 transMapRefSeqV5,698 transMapRnaV5,698 transMapV5,804 uniprot,751 uniprot,774 saccharomyces augustusGene,223 safely refSeqComposite,1450 salzberg genscan,189 same chainCavPor3,528 chainCavPor3,543 chainHg19,521 chainHg19,536 chainMm10,521 chainMm10,536 chainMm39,521 chainMm39,536 chainMonDom5,521 chainMonDom5,536 chainNetCavPor3,531 chainNetCavPor3,546 chainNetHg19,523 chainNetHg19,538 chainNetMm10,523 chainNetMm10,538 chainNetMm39,524 chainNetMm39,539 chainNetMonDom5,524 chainNetMonDom5,539 chainNetRn6,527 chainNetRn6,542 chainRn6,524 chainRn6,539 nestedRepeats,143 netCavPor3,528 netCavPor3,543 netHg19,521 netHg19,536 netMm10,521 netMm10,536 netMm39,521 netMm39,536 netMonDom5,521 netMonDom5,536 netRn6,524 netRn6,539 refSeqComposite,1217 tRNAs,247 uniprot,608 uniprot,612 uniprot,641 uniprot,1173 xenoMrna,122 xenoMrna,127 sample augustusGene,133 sampling augustusGene,129 sanborn transMapEnsemblV5,786 transMapEstV5,755 transMapRefSeqV5,755 transMapRnaV5,755 transMapV5,861 santa chainCavPor3,965 chainCavPor3,1010 chainHg19,956 chainHg19,1001 chainMm10,956 chainMm10,1001 chainMm39,956 chainMm39,1001 chainMonDom5,956 chainMonDom5,1001 chainNetCavPor3,968 chainNetCavPor3,1013 chainNetHg19,958 chainNetHg19,1003 chainNetMm10,958 chainNetMm10,1003 chainNetMm39,959 chainNetMm39,1004 chainNetMonDom5,959 chainNetMonDom5,1004 chainNetRn6,962 chainNetRn6,1007 chainRn6,959 chainRn6,1004 netCavPor3,965 netCavPor3,1010 netHg19,956 netHg19,1001 netMm10,956 netMm10,1001 netMm39,956 netMm39,1001 netMonDom5,956 netMonDom5,1001 netRn6,959 netRn6,1004 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 sayers est,755 intronEst,839 mrna,472 xenoMrna,547 scaffold gold,49 gold,108 scaffolds ctgPos2,1 ctgPos2,3 ctgPos2,16 gold,32 scale HLTOGAannotvHg38v1,363 scheib uniprot,2012 schwartz chainCavPor3,932 chainCavPor3,1089 chainHg19,923 chainHg19,1080 chainMm10,923 chainMm10,1080 chainMm39,923 chainMm39,1080 chainMonDom5,923 chainMonDom5,1080 chainNetCavPor3,935 chainNetCavPor3,1092 chainNetHg19,925 chainNetHg19,1082 chainNetMm10,925 chainNetMm10,1082 chainNetMm39,926 chainNetMm39,1083 chainNetMonDom5,926 chainNetMonDom5,1083 chainNetRn6,929 chainNetRn6,1086 chainRn6,926 chainRn6,1083 netCavPor3,932 netCavPor3,1089 netHg19,923 netHg19,1080 netMm10,923 netMm10,1080 netMm39,923 netMm39,1080 netMonDom5,923 netMonDom5,1080 netRn6,926 netRn6,1083 sci chainCavPor3,1075 chainHg19,1066 chainMm10,1066 chainMm39,1066 chainMonDom5,1066 chainNetCavPor3,1078 chainNetHg19,1068 chainNetMm10,1068 chainNetMm39,1069 chainNetMonDom5,1069 chainNetRn6,1072 chainRn6,1069 netCavPor3,1075 netHg19,1066 netMm10,1066 netMm39,1066 netMonDom5,1066 netRn6,1069 science HLTOGAannotvHg38v1,364 genscan,203 scientific refSeqComposite,281 uniprot,37 scientists est,740 intronEst,824 mrna,457 refGene,330 refSeqComposite,1717 transMapEnsemblV5,697 transMapEstV5,666 transMapRefSeqV5,666 transMapRnaV5,666 transMapV5,772 xenoMrna,532 xenoRefGene,290 score chainCavPor3,686 chainHg19,677 chainMm10,677 chainMm39,677 chainMonDom5,677 chainNetCavPor3,689 chainNetHg19,679 chainNetMm10,679 chainNetMm39,680 chainNetMonDom5,680 chainNetRn6,683 chainRn6,680 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netCavPor3,686 netHg19,677 netMm10,677 netMm39,677 netMonDom5,677 netRn6,680 quality,19 tRNAs,116 tRNAs,121 tRNAs,259 uniprot,950 uniprot,1116 uniprot,1317 uniprot,1349 uniprot,1491 scored geneid,79 geneid,97 scores geneid,103 geneid,137 quality,2 quality,6 quality,13 quality,52 quality,87 tRNAs,163 tRNAs,178 tRNAs,198 uniprot,1085 scoring chainCavPor3,80 chainCavPor3,90 chainCavPor3,665 chainCavPor3,682 chainCavPor3,1037 chainHg19,77 chainHg19,87 chainHg19,656 chainHg19,673 chainHg19,1028 chainMm10,77 chainMm10,87 chainMm10,656 chainMm10,673 chainMm10,1028 chainMm39,77 chainMm39,87 chainMm39,656 chainMm39,673 chainMm39,1028 chainMonDom5,77 chainMonDom5,87 chainMonDom5,656 chainMonDom5,673 chainMonDom5,1028 chainNetCavPor3,83 chainNetCavPor3,93 chainNetCavPor3,668 chainNetCavPor3,685 chainNetCavPor3,1040 chainNetHg19,79 chainNetHg19,89 chainNetHg19,658 chainNetHg19,675 chainNetHg19,1030 chainNetMm10,79 chainNetMm10,89 chainNetMm10,658 chainNetMm10,675 chainNetMm10,1030 chainNetMm39,80 chainNetMm39,90 chainNetMm39,659 chainNetMm39,676 chainNetMm39,1031 chainNetMonDom5,80 chainNetMonDom5,90 chainNetMonDom5,659 chainNetMonDom5,676 chainNetMonDom5,1031 chainNetRn6,82 chainNetRn6,92 chainNetRn6,662 chainNetRn6,679 chainNetRn6,1034 chainRn6,79 chainRn6,89 chainRn6,659 chainRn6,676 chainRn6,1031 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netCavPor3,80 netCavPor3,90 netCavPor3,665 netCavPor3,682 netCavPor3,1037 netHg19,77 netHg19,87 netHg19,656 netHg19,673 netHg19,1028 netMm10,77 netMm10,87 netMm10,656 netMm10,673 netMm10,1028 netMm39,77 netMm39,87 netMm39,656 netMm39,673 netMm39,1028 netMonDom5,77 netMonDom5,87 netMonDom5,656 netMonDom5,673 netMonDom5,1028 netRn6,79 netRn6,89 netRn6,659 netRn6,676 netRn6,1031 tRNAs,294 scott chainCavPor3,931 chainHg19,922 chainMm10,922 chainMm39,922 chainMonDom5,922 chainNetCavPor3,934 chainNetHg19,924 chainNetMm10,924 chainNetMm39,925 chainNetMonDom5,925 chainNetRn6,928 chainRn6,925 netCavPor3,931 netHg19,922 netMm10,922 netMm39,922 netMonDom5,922 netRn6,925 screens nestedRepeats,32 rmsk,22 script uniprot,1549 scrna rmsk,193 search blastHg18KG,166 tRNAs,62 transMapEnsemblV5,798 transMapEstV5,767 transMapRefSeqV5,767 transMapRnaV5,767 transMapV5,873 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 searls genscan,191 second xenoMrna,91 secondary tRNAs,76 tRNAs,236 tRNAs,314 tRNAs,323 tRNAs,343 unipStruct,5 uniprot,361 secreted uniprot,247 section ensGene,53 genscan,153 nestedRepeats,67 refSeqComposite,91 refSeqComposite,1650 rmsk,103 uniprot,897 sections chainCavPor3,812 chainHg19,803 chainMm10,803 chainMm39,803 chainMonDom5,803 chainNetCavPor3,815 chainNetHg19,805 chainNetMm10,805 chainNetMm39,806 chainNetMonDom5,806 chainNetRn6,809 chainRn6,806 netCavPor3,812 netHg19,803 netMm10,803 netMm39,803 netMonDom5,803 netRn6,806 see augustusGene,42 blastHg18KG,152 ensGene,25 ensGene,161 gap,183 genscan,57 gold,153 intronEst,122 microsat,101 nestedRepeats,296 nestedRepeats,370 refGene,77 refGene,247 refSeqComposite,88 refSeqComposite,136 refSeqComposite,336 refSeqComposite,541 rmsk,319 rmsk,393 simpleRepeat,63 transMapEnsemblV5,229 transMapEnsemblV5,571 transMapEstV5,198 transMapEstV5,540 transMapRefSeqV5,198 transMapRefSeqV5,540 transMapRnaV5,198 transMapRnaV5,540 transMapV5,304 transMapV5,646 uniprot,188 uniprot,526 uniprot,768 uniprot,894 xenoRefGene,207 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select genscan,90 refGene,200 refSeqComposite,510 refSeqComposite,527 refSeqComposite,531 refSeqComposite,544 refSeqComposite,834 xenoRefGene,160 selected est,293 est,309 est,362 intronEst,374 intronEst,390 intronEst,443 mrna,239 mrna,255 mrna,308 refSeqComposite,159 transMapEnsemblV5,212 transMapEnsemblV5,249 transMapEnsemblV5,260 transMapEnsemblV5,328 transMapEstV5,181 transMapEstV5,218 transMapEstV5,229 transMapEstV5,297 transMapRefSeqV5,181 transMapRefSeqV5,218 transMapRefSeqV5,229 transMapRefSeqV5,297 transMapRnaV5,181 transMapRnaV5,218 transMapRnaV5,229 transMapRnaV5,297 transMapV5,287 transMapV5,324 transMapV5,335 transMapV5,403 uniprot,986 xenoMrna,314 xenoMrna,330 xenoMrna,383 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sensitivity transMapV5,147 sep chainCavPor3,1080 chainHg19,1071 chainMm10,1071 chainMm39,1071 chainMonDom5,1071 chainNetCavPor3,1083 chainNetHg19,1073 chainNetMm10,1073 chainNetMm39,1074 chainNetMonDom5,1074 chainNetRn6,1077 chainRn6,1074 nestedRepeats,356 netCavPor3,1080 netHg19,1071 netMm10,1071 netMm39,1071 netMonDom5,1071 netRn6,1074 rmsk,379 separated est,264 intronEst,345 mrna,210 xenoMrna,285 seq unipConflict,1 sequence HLTOGAannotvHg38v1,150 HLTOGAannotvHg38v1,309 augustusGene,32 augustusGene,70 blastHg18KG,75 chainCavPor3,171 chainCavPor3,299 chainCavPor3,1040 chainHg19,166 chainHg19,292 chainHg19,1031 chainMm10,166 chainMm10,292 chainMm10,1031 chainMm39,166 chainMm39,292 chainMm39,1031 chainMonDom5,166 chainMonDom5,292 chainMonDom5,1031 chainNetCavPor3,174 chainNetCavPor3,302 chainNetCavPor3,1043 chainNetHg19,168 chainNetHg19,294 chainNetHg19,1033 chainNetMm10,168 chainNetMm10,294 chainNetMm10,1033 chainNetMm39,169 chainNetMm39,295 chainNetMm39,1034 chainNetMonDom5,169 chainNetMonDom5,295 chainNetMonDom5,1034 chainNetRn6,171 chainNetRn6,297 chainNetRn6,1037 chainRn6,168 chainRn6,294 chainRn6,1034 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 est,18 est,89 est,398 est,407 est,581 est,718 est,730 est,737 gap,104 geneid,82 gold,144 intronEst,20 intronEst,73 intronEst,170 intronEst,479 intronEst,488 intronEst,662 intronEst,799 intronEst,814 intronEst,821 mrna,344 mrna,434 mrna,447 mrna,454 netCavPor3,171 netCavPor3,299 netCavPor3,1040 netHg19,166 netHg19,292 netHg19,1031 netMm10,166 netMm10,292 netMm10,1031 netMm39,166 netMm39,292 netMm39,1031 netMonDom5,166 netMonDom5,292 netMonDom5,1031 netRn6,168 netRn6,294 netRn6,1034 refGene,314 refGene,326 refGene,408 refGene,413 refSeqComposite,651 refSeqComposite,662 refSeqComposite,878 refSeqComposite,978 refSeqComposite,1006 refSeqComposite,1033 refSeqComposite,1045 refSeqComposite,1078 refSeqComposite,1082 refSeqComposite,1087 refSeqComposite,1282 refSeqComposite,1795 refSeqComposite,1800 rmsk,48 rmsk,62 tRNAs,74 tRNAs,182 tRNAs,380 tRNAs,399 tRNAs,456 transMapEnsemblV5,128 transMapEnsemblV5,687 transMapEnsemblV5,694 transMapEstV5,97 transMapEstV5,656 transMapEstV5,663 transMapRefSeqV5,97 transMapRefSeqV5,656 transMapRefSeqV5,663 transMapRnaV5,97 transMapRnaV5,656 transMapRnaV5,663 transMapV5,203 transMapV5,762 transMapV5,769 ucscToINSDC,7 ucscToINSDC,29 unipConflict,4 uniprot,356 uniprot,372 uniprot,381 uniprot,387 uniprot,636 uniprot,967 uniprot,971 uniprot,1134 uniprot,1219 uniprot,1242 uniprot,1379 uniprot,2035 xenoMrna,77 xenoMrna,101 xenoMrna,109 xenoMrna,419 xenoMrna,509 xenoMrna,522 xenoMrna,529 xenoRefGene,274 xenoRefGene,286 xenoRefGene,367 xenoRefGene,372 sequence-to-gene refSeqComposite,680 sequenced ctgPos2,29 sequences blastHg18KG,64 est,29 est,600 est,608 geneid,60 intronEst,41 intronEst,681 intronEst,689 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 refGene,33 refGene,52 refGene,386 refSeqComposite,30 refSeqComposite,111 refSeqComposite,269 refSeqComposite,285 refSeqComposite,883 refSeqComposite,1093 refSeqComposite,1656 refSeqComposite,1773 rmsk,24 rmsk,32 simpleRepeat,84 tRNAs,428 uniprot,16 uniprot,85 uniprot,112 uniprot,114 uniprot,131 uniprot,138 uniprot,166 uniprot,195 uniprot,197 uniprot,377 uniprot,673 uniprot,781 uniprot,1103 uniprot,1374 uniprot,1424 uniprot,1608 uniprot,1611 uniprot,1889 xenoMrna,114 xenoRefGene,30 xenoRefGene,345 sequencing chainCavPor3,894 chainHg19,885 chainMm10,885 chainMm39,885 chainMonDom5,885 chainNetCavPor3,897 chainNetHg19,887 chainNetMm10,887 chainNetMm39,888 chainNetMonDom5,888 chainNetRn6,891 chainRn6,888 ctgPos2,6 cytoBandIdeo,9 gap,6 gc5Base,10 gold,7 netCavPor3,894 netHg19,885 netMm10,885 netMm39,885 netMonDom5,885 netRn6,888 quality,4 quality,9 quality,17 ucscToINSDC,12 server ensGene,144 refSeqComposite,1324 refSeqComposite,1330 refSeqComposite,1346 refSeqComposite,1485 refSeqComposite,1600 refSeqComposite,1627 refSeqComposite,1679 refSeqComposite,1705 transMapEnsemblV5,558 transMapEstV5,527 transMapRefSeqV5,527 transMapRnaV5,527 transMapV5,633 uniprot,1699 uniprot,1745 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 ensGene,116 set blastHg18KG,146 gap,101 gap,111 geneid,123 refSeqComposite,160 refSeqComposite,1495 refSeqComposite,1632 refSeqComposite,1695 tRNAs,71 transMapEnsemblV5,279 transMapEstV5,248 transMapRefSeqV5,248 transMapRnaV5,248 transMapV5,354 uniprot,838 uniprot,858 uniprot,1287 uniprot,1597 sets augustusGene,158 refSeqComposite,154 setting refSeqComposite,1037 refSeqComposite,1064 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 refSeqComposite,742 several HLTOGAannotvHg38v1,274 est,423 intronEst,504 mrna,362 transMapEnsemblV5,137 transMapEstV5,106 transMapRefSeqV5,106 transMapRnaV5,106 transMapV5,212 xenoMrna,437 sf blastHg18KG,154 shade nestedRepeats,194 shaded est,67 mrna,48 nestedRepeats,182 xenoMrna,53 shades nestedRepeats,202 shading intronEst,146 nestedRepeats,240 refGene,97 refSeqComposite,604 rmsk,208 rmsk,239 xenoRefGene,57 sharma HLTOGAannotvHg38v1,342 shift refSeqComposite,958 shifted refSeqComposite,967 refSeqComposite,1014 short refSeqComposite,925 rmsk,153 uniprot,460 uniprot,978 shortgap refSeqComposite,961 shotgun ctgPos2,14 gap,78 gap,121 gold,20 gold,139 should est,329 est,633 intronEst,410 intronEst,714 mrna,275 tRNAs,226 xenoMrna,350 show intronEst,29 intronEst,62 refGene,163 refSeqComposite,156 refSeqComposite,787 refSeqComposite,902 refSeqComposite,916 uniprot,80 uniprot,227 uniprot,538 xenoRefGene,123 showing refSeqComposite,956 shown HLTOGAannotvHg38v1,136 chainCavPor3,43 chainCavPor3,56 chainHg19,41 chainHg19,54 chainMm10,41 chainMm10,54 chainMm39,41 chainMm39,54 chainMonDom5,41 chainMonDom5,54 chainNetCavPor3,46 chainNetCavPor3,59 chainNetHg19,43 chainNetHg19,56 chainNetMm10,43 chainNetMm10,56 chainNetMm39,44 chainNetMm39,57 chainNetMonDom5,44 chainNetMonDom5,57 chainNetRn6,45 chainNetRn6,58 chainRn6,42 chainRn6,55 est,147 gold,91 intronEst,228 microsat,48 mrna,93 netCavPor3,43 netCavPor3,56 netHg19,41 netHg19,54 netMm10,41 netMm10,54 netMm39,41 netMm39,54 netMonDom5,41 netMonDom5,54 netRn6,42 netRn6,55 uniprot,504 uniprot,628 uniprot,646 uniprot,1580 uniprot,1631 xenoMrna,168 shows augustusGene,15 augustusGene,108 chainCavPor3,17 chainCavPor3,64 chainCavPor3,268 chainHg19,15 chainHg19,62 chainHg19,263 chainMm10,15 chainMm10,62 chainMm10,263 chainMm39,15 chainMm39,62 chainMm39,263 chainMonDom5,15 chainMonDom5,62 chainMonDom5,263 chainNetCavPor3,20 chainNetCavPor3,67 chainNetCavPor3,271 chainNetHg19,17 chainNetHg19,64 chainNetHg19,265 chainNetMm10,17 chainNetMm10,64 chainNetMm10,265 chainNetMm39,18 chainNetMm39,65 chainNetMm39,266 chainNetMonDom5,18 chainNetMonDom5,65 chainNetMonDom5,266 chainNetRn6,19 chainNetRn6,66 chainNetRn6,268 chainRn6,16 chainRn6,63 chainRn6,265 ctgPos2,10 est,13 gc5Base,16 geneid,13 genscan,13 gold,11 intronEst,15 mrna,14 nestedRepeats,17 nestedRepeats,81 netCavPor3,17 netCavPor3,64 netCavPor3,268 netHg19,15 netHg19,62 netHg19,263 netMm10,15 netMm10,62 netMm10,263 netMm39,15 netMm39,62 netMm39,263 netMonDom5,15 netMonDom5,62 netMonDom5,263 netRn6,16 netRn6,63 netRn6,265 quality,15 refGene,20 refSeqComposite,18 refSeqComposite,1000 refSeqComposite,1011 uniprot,14 uniprot,484 xenoRefGene,13 side est,596 gap,35 intronEst,677 siepel transMapEnsemblV5,711 transMapEstV5,680 transMapRefSeqV5,680 transMapRnaV5,680 transMapV5,786 signal augustusGene,48 augustusGene,63 unipLocSignal,1 unipLocSignal,4 uniprot,238 uniprot,476 uniprot,511 uniprot,564 signals genscan,34 genscan,187 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 signs intronEst,30 similar nestedRepeats,199 uniprot,1403 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainCavPor3,103 chainHg19,99 chainMm10,99 chainMm39,99 chainMonDom5,99 chainNetCavPor3,106 chainNetHg19,101 chainNetMm10,101 chainNetMm39,102 chainNetMonDom5,102 chainNetRn6,104 chainRn6,101 netCavPor3,103 netHg19,99 netMm10,99 netMm39,99 netMonDom5,99 netRn6,101 since chainCavPor3,577 chainHg19,570 chainMm10,570 chainMm39,570 chainMonDom5,570 chainNetCavPor3,580 chainNetHg19,572 chainNetMm10,572 chainNetMm39,573 chainNetMonDom5,573 chainNetRn6,576 chainRn6,573 netCavPor3,577 netHg19,570 netMm10,570 netMm39,570 netMonDom5,570 netRn6,573 uniprot,1383 sine rmsk,157 sines tRNAs,150 single blastHg18KG,99 chainCavPor3,130 chainCavPor3,139 chainCavPor3,627 chainCavPor3,633 chainHg19,126 chainHg19,135 chainHg19,619 chainHg19,624 chainMm10,126 chainMm10,135 chainMm10,619 chainMm10,624 chainMm39,126 chainMm39,135 chainMm39,619 chainMm39,624 chainMonDom5,126 chainMonDom5,135 chainMonDom5,619 chainMonDom5,624 chainNetCavPor3,133 chainNetCavPor3,142 chainNetCavPor3,630 chainNetCavPor3,636 chainNetHg19,128 chainNetHg19,137 chainNetHg19,621 chainNetHg19,626 chainNetMm10,128 chainNetMm10,137 chainNetMm10,621 chainNetMm10,626 chainNetMm39,129 chainNetMm39,138 chainNetMm39,622 chainNetMm39,627 chainNetMonDom5,129 chainNetMonDom5,138 chainNetMonDom5,622 chainNetMonDom5,627 chainNetRn6,131 chainNetRn6,140 chainNetRn6,625 chainNetRn6,630 chainRn6,128 chainRn6,137 chainRn6,622 chainRn6,627 est,630 est,682 intronEst,711 intronEst,763 mrna,398 nestedRepeats,178 netCavPor3,130 netCavPor3,139 netCavPor3,627 netCavPor3,633 netHg19,126 netHg19,135 netHg19,619 netHg19,624 netMm10,126 netMm10,135 netMm10,619 netMm10,624 netMm39,126 netMm39,135 netMm39,619 netMm39,624 netMonDom5,126 netMonDom5,135 netMonDom5,619 netMonDom5,624 netRn6,128 netRn6,137 netRn6,622 netRn6,627 refGene,278 refSeqComposite,530 refSeqComposite,1246 transMapEnsemblV5,477 transMapEstV5,446 transMapRefSeqV5,446 transMapRnaV5,446 transMapV5,552 uniprot,141 xenoMrna,472 xenoRefGene,238 single-lined chainCavPor3,211 chainHg19,206 chainMm10,206 chainMm39,206 chainMonDom5,206 chainNetCavPor3,214 chainNetHg19,208 chainNetMm10,208 chainNetMm39,209 chainNetMonDom5,209 chainNetRn6,211 chainRn6,208 netCavPor3,211 netHg19,206 netMm10,206 netMm39,206 netMonDom5,206 netRn6,208 single-read est,28 intronEst,40 site genscan,157 sites augustusGene,54 augustusGene,59 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 geneid,71 geneid,94 geneid,107 refSeqComposite,271 uniprot,342 uniprot,354 uniprot,578 uniprot,585 size blastHg18KG,93 sizes gap,128 gold,44 skepticism est,638 intronEst,719 skip refSeqComposite,1030 skipped refSeqComposite,1043 sm refGene,363 refSeqComposite,1750 xenoRefGene,322 small refSeqComposite,933 smallsize chainCavPor3,712 chainHg19,703 chainMm10,703 chainMm39,703 chainMonDom5,703 chainNetCavPor3,715 chainNetHg19,705 chainNetMm10,705 chainNetMm39,706 chainNetMonDom5,706 chainNetRn6,709 chainRn6,706 netCavPor3,712 netHg19,703 netMm10,703 netMm39,703 netMonDom5,703 netRn6,706 smit chainCavPor3,949 chainCavPor3,1093 chainHg19,940 chainHg19,1084 chainMm10,940 chainMm10,1084 chainMm39,940 chainMm39,1084 chainMonDom5,940 chainMonDom5,1084 chainNetCavPor3,952 chainNetCavPor3,1096 chainNetHg19,942 chainNetHg19,1086 chainNetMm10,942 chainNetMm10,1086 chainNetMm39,943 chainNetMm39,1087 chainNetMonDom5,943 chainNetMonDom5,1087 chainNetRn6,946 chainNetRn6,1090 chainRn6,943 chainRn6,1087 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netCavPor3,949 netCavPor3,1093 netHg19,940 netHg19,1084 netMm10,940 netMm10,1084 netMm39,940 netMm39,1084 netMonDom5,940 netMonDom5,1084 netRn6,943 netRn6,1087 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 snrna rmsk,192 so chainCavPor3,441 chainHg19,434 chainMm10,434 chainMm39,434 chainMonDom5,434 chainNetCavPor3,444 chainNetHg19,436 chainNetMm10,436 chainNetMm39,437 chainNetMonDom5,437 chainNetRn6,440 chainRn6,437 netCavPor3,441 netHg19,434 netMm10,434 netMm39,434 netMonDom5,434 netRn6,437 refSeqComposite,301 refSeqComposite,1611 tRNAs,277 uniprot,1135 uniprot,1430 society refSeqComposite,1075 soft-masked rmsk,305 software HLTOGAannotvHg38v1,327 nestedRepeats,255 refSeqComposite,376 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 est,155 est,552 est,568 est,670 intronEst,236 intronEst,633 intronEst,649 intronEst,751 mrna,101 nestedRepeats,207 refSeqComposite,656 refSeqComposite,704 rmsk,105 rmsk,268 transMapEnsemblV5,297 transMapEnsemblV5,307 transMapEstV5,266 transMapEstV5,276 transMapRefSeqV5,266 transMapRefSeqV5,276 transMapRnaV5,266 transMapRnaV5,276 transMapV5,372 transMapV5,382 uniprot,318 xenoMrna,176 sometimes simpleRepeat,50 uniprot,983 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainCavPor3,781 chainHg19,772 chainMm10,772 chainMm39,772 chainMonDom5,772 chainNetCavPor3,784 chainNetHg19,774 chainNetMm10,774 chainNetMm39,775 chainNetMonDom5,775 chainNetRn6,778 chainRn6,775 netCavPor3,781 netHg19,772 netMm10,772 netMm39,772 netMonDom5,772 netRn6,775 uniprot,556 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 refSeqComposite,1512 transMapEnsemblV5,152 transMapEnsemblV5,323 transMapEnsemblV5,340 transMapEnsemblV5,404 transMapEnsemblV5,429 transMapEnsemblV5,620 transMapEnsemblV5,634 transMapEstV5,121 transMapEstV5,292 transMapEstV5,309 transMapEstV5,373 transMapEstV5,398 transMapEstV5,589 transMapEstV5,603 transMapRefSeqV5,121 transMapRefSeqV5,292 transMapRefSeqV5,309 transMapRefSeqV5,373 transMapRefSeqV5,398 transMapRefSeqV5,589 transMapRefSeqV5,603 transMapRnaV5,121 transMapRnaV5,292 transMapRnaV5,309 transMapRnaV5,373 transMapRnaV5,398 transMapRnaV5,589 transMapRnaV5,603 transMapV5,227 transMapV5,398 transMapV5,415 transMapV5,479 transMapV5,504 transMapV5,695 transMapV5,709 uniprot,820 uniprot,1545 uniprot,1774 uniprot,1788 sources transMapEnsemblV5,48 transMapEnsemblV5,66 space est,267 intronEst,348 mrna,213 uniprot,1990 xenoMrna,288 spaces gold,89 spain geneid,48 span chainCavPor3,400 chainHg19,393 chainMm10,393 chainMm39,393 chainMonDom5,393 chainNetCavPor3,403 chainNetHg19,395 chainNetMm10,395 chainNetMm39,396 chainNetMonDom5,396 chainNetRn6,399 chainRn6,396 netCavPor3,400 netHg19,393 netMm10,393 netMm39,393 netMonDom5,393 netRn6,396 refSeqComposite,1002 specialized simpleRepeat,29 species HLTOGAannotvHg38v1,52 HLTOGAannotvHg38v1,127 augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainCavPor3,120 chainCavPor3,174 chainCavPor3,193 chainCavPor3,900 chainHg19,116 chainHg19,169 chainHg19,188 chainHg19,891 chainMm10,116 chainMm10,169 chainMm10,188 chainMm10,891 chainMm39,116 chainMm39,169 chainMm39,188 chainMm39,891 chainMonDom5,116 chainMonDom5,169 chainMonDom5,188 chainMonDom5,891 chainNetCavPor3,123 chainNetCavPor3,177 chainNetCavPor3,196 chainNetCavPor3,903 chainNetHg19,118 chainNetHg19,171 chainNetHg19,190 chainNetHg19,893 chainNetMm10,118 chainNetMm10,171 chainNetMm10,190 chainNetMm10,893 chainNetMm39,119 chainNetMm39,172 chainNetMm39,191 chainNetMm39,894 chainNetMonDom5,119 chainNetMonDom5,172 chainNetMonDom5,191 chainNetMonDom5,894 chainNetRn6,121 chainNetRn6,174 chainNetRn6,193 chainNetRn6,897 chainRn6,118 chainRn6,171 chainRn6,190 chainRn6,894 netCavPor3,120 netCavPor3,174 netCavPor3,193 netCavPor3,900 netHg19,116 netHg19,169 netHg19,188 netHg19,891 netMm10,116 netMm10,169 netMm10,188 netMm10,891 netMm39,116 netMm39,169 netMm39,188 netMm39,891 netMonDom5,116 netMonDom5,169 netMonDom5,188 netMonDom5,891 netRn6,118 netRn6,171 netRn6,190 netRn6,894 transMapEnsemblV5,32 transMapEnsemblV5,269 transMapEstV5,30 transMapEstV5,238 transMapRefSeqV5,30 transMapRefSeqV5,238 transMapRnaV5,30 transMapRnaV5,238 transMapV5,29 transMapV5,78 transMapV5,114 transMapV5,344 species-specific augustusGene,156 specific est,194 intronEst,275 mrna,140 simpleRepeat,53 tRNAs,70 tRNAs,233 tRNAs,270 xenoMrna,215 specify refSeqComposite,1110 speed refSeqComposite,1438 splice augustusGene,53 geneid,70 genscan,156 refSeqComposite,270 uniprot,144 spliced intronEst,1 intronEst,8 intronEst,58 transMapEnsemblV5,175 transMapEstV5,17 transMapEstV5,144 transMapRefSeqV5,144 transMapRnaV5,144 transMapV5,250 splicing augustusGene,123 genscan,33 genscan,186 intronEst,32 intronEst,93 split chainCavPor3,582 chainHg19,574 chainMm10,574 chainMm39,574 chainMonDom5,574 chainNetCavPor3,585 chainNetHg19,576 chainNetMm10,576 chainNetMm39,577 chainNetMonDom5,577 chainNetRn6,580 chainRn6,577 netCavPor3,582 netHg19,574 netMm10,574 netMm39,574 netMonDom5,574 netRn6,577 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 sr tRNAs,395 tRNAs,443 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srcuniq transMapEnsemblV5,421 transMapEstV5,390 transMapRefSeqV5,390 transMapRnaV5,390 transMapV5,496 srprna rmsk,194 staff refSeqComposite,639 refSeqComposite,690 uniprot,42 uniprot,1965 stage uniprot,1228 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 transMapEnsemblV5,754 transMapEstV5,723 transMapRefSeqV5,723 transMapRnaV5,723 transMapV5,829 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 est,560 geneid,72 intronEst,641 refSeqComposite,1554 transMapEnsemblV5,668 transMapEstV5,637 transMapRefSeqV5,637 transMapRnaV5,637 transMapV5,743 uniprot,125 uniprot,209 uniprot,1821 state chainCavPor3,926 chainCavPor3,1029 chainHg19,917 chainHg19,1020 chainMm10,917 chainMm10,1020 chainMm39,917 chainMm39,1020 chainMonDom5,917 chainMonDom5,1020 chainNetCavPor3,929 chainNetCavPor3,1032 chainNetHg19,919 chainNetHg19,1022 chainNetMm10,919 chainNetMm10,1022 chainNetMm39,920 chainNetMm39,1023 chainNetMonDom5,920 chainNetMonDom5,1023 chainNetRn6,923 chainNetRn6,1026 chainRn6,920 chainRn6,1023 netCavPor3,926 netCavPor3,1029 netHg19,917 netHg19,1020 netMm10,917 netMm10,1020 netMm39,917 netMm39,1020 netMonDom5,917 netMonDom5,1020 netRn6,920 netRn6,1023 statistical augustusGene,47 statistics gap,188 gold,158 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 refSeqComposite,1558 transMapEnsemblV5,672 transMapEstV5,641 transMapRefSeqV5,641 transMapRnaV5,641 transMapV5,747 uniprot,1825 stefanie augustusGene,267 step geneid,69 transMapEnsemblV5,305 transMapEstV5,274 transMapRefSeqV5,274 transMapRnaV5,274 transMapV5,380 uniprot,901 uniprot,1155 uniprot,1330 stevens transMapEnsemblV5,720 transMapEstV5,689 transMapRefSeqV5,689 transMapRnaV5,689 transMapV5,795 still tRNAs,142 stop geneid,74 storage chainCavPor3,983 chainHg19,974 chainMm10,974 chainMm39,974 chainMonDom5,974 chainNetCavPor3,986 chainNetHg19,976 chainNetMm10,976 chainNetMm39,977 chainNetMonDom5,977 chainNetRn6,980 chainRn6,977 netCavPor3,983 netHg19,974 netMm10,974 netMm39,974 netMonDom5,974 netRn6,977 stored refSeqComposite,1474 transMapEnsemblV5,541 transMapEstV5,510 transMapRefSeqV5,510 transMapRnaV5,510 transMapV5,616 uniprot,1733 strand chainCavPor3,251 chainHg19,246 chainMm10,246 chainMm39,246 chainMonDom5,246 chainNetCavPor3,254 chainNetHg19,248 chainNetMm10,248 chainNetMm39,249 chainNetMonDom5,249 chainNetRn6,251 chainRn6,248 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 est,74 intronEst,155 nestedRepeats,144 nestedRepeats,155 netCavPor3,251 netHg19,246 netMm10,246 netMm39,246 netMonDom5,246 netRn6,248 xenoMrna,60 strands uniprot,365 strategy uniprot,1120 uniprot,1193 stringency transMapV5,119 strong HLTOGAannotvHg38v1,253 HLTOGAannotvHg38v1,282 structural tRNAs,184 structure augustusGene,113 geneid,65 geneid,129 tRNAs,77 tRNAs,237 tRNAs,315 unipStruct,1 unipStruct,6 uniprot,362 uniprot,2037 structures augustusGene,164 genscan,215 tRNAs,324 tRNAs,344 studies tRNAs,272 studying chainCavPor3,293 chainHg19,287 chainMm10,287 chainMm39,287 chainMonDom5,287 chainNetCavPor3,296 chainNetHg19,289 chainNetMm10,289 chainNetMm39,290 chainNetMonDom5,290 chainNetRn6,292 chainRn6,289 netCavPor3,293 netHg19,287 netMm10,287 netMm39,287 netMonDom5,287 netRn6,289 subcellular uniprot,553 subject refSeqComposite,674 refSeqComposite,699 submit refGene,58 refSeqComposite,117 submitted est,732 intronEst,816 mrna,449 transMapEnsemblV5,689 transMapEstV5,658 transMapRefSeqV5,658 transMapRnaV5,658 transMapV5,764 xenoMrna,524 submodel augustusGene,331 subsections chainCavPor3,647 chainHg19,638 chainMm10,638 chainMm39,638 chainMonDom5,638 chainNetCavPor3,650 chainNetHg19,640 chainNetMm10,640 chainNetMm39,641 chainNetMonDom5,641 chainNetRn6,644 chainRn6,641 netCavPor3,647 netHg19,638 netMm10,638 netMm39,638 netMonDom5,638 netRn6,641 subsequent transMapEnsemblV5,439 transMapEstV5,408 transMapRefSeqV5,408 transMapRnaV5,408 transMapV5,514 subset est,133 intronEst,214 microsat,54 mrna,79 ncbiRefSeqCurated,7 ncbiRefSeqPredicted,7 refSeqComposite,211 refSeqComposite,341 refSeqComposite,511 refSeqComposite,516 refSeqComposite,547 refSeqComposite,549 refSeqComposite,579 refSeqComposite,791 transMapEnsemblV5,206 transMapEstV5,175 transMapRefSeqV5,175 transMapRnaV5,175 transMapV5,281 xenoMrna,154 substantial chainCavPor3,170 chainHg19,165 chainMm10,165 chainMm39,165 chainMonDom5,165 chainNetCavPor3,173 chainNetHg19,167 chainNetMm10,167 chainNetMm39,168 chainNetMonDom5,168 chainNetRn6,170 chainRn6,167 netCavPor3,170 netHg19,165 netMm10,165 netMm39,165 netMonDom5,165 netRn6,167 subtrack refSeqComposite,746 refSeqComposite,758 uniprot,411 subtracks chainCavPor3,31 chainCavPor3,38 chainHg19,29 chainHg19,36 chainMm10,29 chainMm10,36 chainMm39,29 chainMm39,36 chainMonDom5,29 chainMonDom5,36 chainNetCavPor3,34 chainNetCavPor3,41 chainNetHg19,31 chainNetHg19,38 chainNetMm10,31 chainNetMm10,38 chainNetMm39,32 chainNetMm39,39 chainNetMonDom5,32 chainNetMonDom5,39 chainNetRn6,33 chainNetRn6,40 chainRn6,30 chainRn6,37 netCavPor3,31 netCavPor3,38 netHg19,29 netHg19,36 netMm10,29 netMm10,36 netMm39,29 netMm39,36 netMonDom5,29 netMonDom5,36 netRn6,30 netRn6,37 refSeqComposite,34 refSeqComposite,162 refSeqComposite,186 refSeqComposite,1394 uniprot,59 uniprot,72 uniprot,520 uniprot,548 subtracts refSeqComposite,178 successful est,590 intronEst,671 such chainCavPor3,861 chainHg19,852 chainMm10,852 chainMm39,852 chainMonDom5,852 chainNetCavPor3,864 chainNetHg19,854 chainNetMm10,854 chainNetMm39,855 chainNetMonDom5,855 chainNetRn6,858 chainRn6,855 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netCavPor3,861 netHg19,852 netMm10,852 netMm39,852 netMonDom5,852 netRn6,855 refSeqComposite,412 uniprot,306 suffix transMapEnsemblV5,398 transMapEstV5,367 transMapRefSeqV5,367 transMapRnaV5,367 transMapV5,473 uniprot,1255 suggestions refGene,57 refSeqComposite,116 suitable uniprot,1868 sum geneid,100 geneid,134 supercontig gap,82 gap,108 supercontigs ctgPos2,37 gap,139 gold,37 suppl augustusGene,336 supported gap,40 sure refSeqComposite,1096 uniprot,1407 swiss-prot uniprot,2025 swissprot unipAliSwissprot,1 unipAliSwissprot,6 uniprot,3 uniprot,24 uniprot,31 uniprot,76 uniprot,109 uniprot,116 uniprot,127 uniprot,414 uniprot,454 uniprot,495 uniprot,623 uniprot,703 uniprot,1373 symp chainCavPor3,1043 chainHg19,1034 chainMm10,1034 chainMm39,1034 chainMonDom5,1034 chainNetCavPor3,1046 chainNetHg19,1036 chainNetMm10,1036 chainNetMm39,1037 chainNetMonDom5,1037 chainNetRn6,1040 chainRn6,1037 netCavPor3,1043 netHg19,1034 netMm10,1034 netMm39,1034 netMonDom5,1034 netRn6,1037 syn chainCavPor3,524 chainHg19,517 chainMm10,517 chainMm39,517 chainMonDom5,517 chainNetCavPor3,527 chainNetHg19,519 chainNetMm10,519 chainNetMm39,520 chainNetMonDom5,520 chainNetRn6,523 chainRn6,520 netCavPor3,524 netHg19,517 netMm10,517 netMm39,517 netMonDom5,517 netRn6,520 transMapEnsemblV5,253 transMapEstV5,222 transMapRefSeqV5,222 transMapRnaV5,222 transMapV5,328 syntenic chainCavPor3,287 chainCavPor3,868 chainHg19,281 chainHg19,859 chainMm10,281 chainMm10,859 chainMm39,281 chainMm39,859 chainMonDom5,281 chainMonDom5,859 chainNetCavPor3,290 chainNetCavPor3,871 chainNetHg19,283 chainNetHg19,861 chainNetMm10,283 chainNetMm10,861 chainNetMm39,284 chainNetMm39,862 chainNetMonDom5,284 chainNetMonDom5,862 chainNetRn6,286 chainNetRn6,865 chainRn6,283 chainRn6,862 netCavPor3,287 netCavPor3,868 netHg19,281 netHg19,859 netMm10,281 netMm10,859 netMm39,281 netMm39,859 netMonDom5,281 netMonDom5,859 netRn6,283 netRn6,862 transMapEnsemblV5,235 transMapEnsemblV5,514 transMapEstV5,204 transMapEstV5,483 transMapRefSeqV5,204 transMapRefSeqV5,483 transMapRnaV5,204 transMapRnaV5,483 transMapV5,310 transMapV5,589 syntenically augustusGene,297 transMapEnsemblV5,76 transMapEnsemblV5,765 transMapEstV5,45 transMapEstV5,734 transMapRefSeqV5,45 transMapRefSeqV5,734 transMapRnaV5,45 transMapRnaV5,734 transMapV5,44 transMapV5,840 synteny chainCavPor3,34 chainHg19,32 chainMm10,32 chainMm39,32 chainMonDom5,32 chainNetCavPor3,37 chainNetHg19,34 chainNetMm10,34 chainNetMm39,35 chainNetMonDom5,35 chainNetRn6,36 chainRn6,33 netCavPor3,34 netHg19,32 netMm10,32 netMm39,32 netMonDom5,32 netRn6,33 transMapEnsemblV5,274 transMapEstV5,243 transMapRefSeqV5,243 transMapRnaV5,243 transMapV5,349 synteny-filtered transMapV5,82 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainCavPor3,81 chainHg19,78 chainMm10,78 chainMm39,78 chainMonDom5,78 chainNetCavPor3,84 chainNetHg19,80 chainNetMm10,80 chainNetMm39,81 chainNetMonDom5,81 chainNetRn6,83 chainRn6,80 netCavPor3,81 netHg19,78 netMm10,78 netMm39,78 netMonDom5,78 netRn6,80 refSeqComposite,1463 refSeqComposite,1522 transMapEnsemblV5,630 transMapEstV5,599 transMapRefSeqV5,599 transMapRnaV5,599 transMapV5,705 uniprot,1353 uniprot,1784 systems chainCavPor3,91 chainHg19,88 chainMm10,88 chainMm39,88 chainMonDom5,88 chainNetCavPor3,94 chainNetHg19,90 chainNetMm10,90 chainNetMm39,91 chainNetMonDom5,91 chainNetRn6,93 chainRn6,90 netCavPor3,91 netHg19,88 netMm10,88 netMm39,88 netMonDom5,88 netRn6,90 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 ensGene,169 ensGene,181 ensGene,187 refGene,403 refSeqComposite,1790 xenoRefGene,362 t-123-31-11491 chainCavPor3,680 chainMm10,671 chainMm39,671 chainMonDom5,671 chainNetCavPor3,683 chainNetMm10,673 chainNetMm39,674 chainNetMonDom5,674 chainNetRn6,677 chainRn6,674 netCavPor3,680 netMm10,671 netMm39,671 netMonDom5,671 netRn6,674 t-356-236-33090 chainHg19,671 chainNetHg19,673 netHg19,671 table augustusGene,225 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 ensGene,66 est,219 est,222 est,241 intronEst,300 intronEst,303 intronEst,322 mrna,165 mrna,168 mrna,187 refSeqComposite,1176 refSeqComposite,1308 refSeqComposite,1353 refSeqComposite,1570 transMapEnsemblV5,529 transMapEstV5,498 transMapRefSeqV5,498 transMapRnaV5,498 transMapV5,604 uniprot,1720 xenoMrna,240 xenoMrna,243 xenoMrna,262 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 refSeqComposite,81 refSeqComposite,1314 refSeqComposite,1399 refSeqComposite,1428 uniprot,1301 tablesize chainCavPor3,710 chainHg19,701 chainMm10,701 chainMm39,701 chainMonDom5,701 chainNetCavPor3,713 chainNetHg19,703 chainNetMm10,703 chainNetMm39,704 chainNetMonDom5,704 chainNetRn6,707 chainRn6,704 netCavPor3,710 netHg19,701 netMm10,701 netMm39,701 netMonDom5,701 netRn6,704 tags est,19 intronEst,21 tail est,501 intronEst,582 taken est,472 gap,131 intronEst,553 refGene,27 refSeqComposite,24 xenoRefGene,24 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 transMapEnsemblV5,506 transMapEstV5,475 transMapRefSeqV5,475 transMapRnaV5,475 transMapV5,581 targeted transMapEnsemblV5,734 transMapEstV5,703 transMapRefSeqV5,703 transMapRnaV5,703 transMapV5,809 targeting refSeqComposite,580 task est,161 intronEst,242 mrna,107 xenoMrna,182 tatusova refGene,402 refSeqComposite,1789 xenoRefGene,361 tblastn blastHg18KG,8 blastHg18KG,17 blastHg18KG,78 blastHg18KG,138 uniprot,1476 techniques est,566 intronEst,647 temperature augustusGene,141 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 term est,168 intronEst,249 mrna,114 xenoMrna,189 terminal rmsk,167 terminology refSeqComposite,1071 terms est,212 est,258 intronEst,293 intronEst,339 mrna,158 mrna,204 xenoMrna,233 xenoMrna,279 text est,175 est,215 est,255 intronEst,256 intronEst,296 intronEst,336 mrna,121 mrna,161 mrna,201 uniprot,1763 xenoMrna,196 xenoMrna,236 xenoMrna,276 tgap chainCavPor3,738 chainHg19,729 chainMm10,729 chainMm39,729 chainMonDom5,729 chainNetCavPor3,741 chainNetHg19,731 chainNetMm10,731 chainNetMm39,732 chainNetMonDom5,732 chainNetRn6,735 chainRn6,732 netCavPor3,738 netHg19,729 netMm10,729 netMm39,729 netMonDom5,729 netRn6,732 th transMapEnsemblV5,793 transMapEstV5,762 transMapRefSeqV5,762 transMapRnaV5,762 transMapV5,868 than blastHg18KG,106 chainCavPor3,86 chainCavPor3,513 chainHg19,83 chainHg19,506 chainMm10,83 chainMm10,506 chainMm39,83 chainMm39,506 chainMonDom5,83 chainMonDom5,506 chainNetCavPor3,89 chainNetCavPor3,516 chainNetHg19,85 chainNetHg19,508 chainNetMm10,85 chainNetMm10,508 chainNetMm39,86 chainNetMm39,509 chainNetMonDom5,86 chainNetMonDom5,509 chainNetRn6,88 chainNetRn6,512 chainRn6,85 chainRn6,509 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 est,280 est,573 intronEst,361 intronEst,654 mrna,226 nestedRepeats,213 nestedRepeats,271 netCavPor3,86 netCavPor3,513 netHg19,83 netHg19,506 netMm10,83 netMm10,506 netMm39,83 netMm39,506 netMonDom5,83 netMonDom5,506 netRn6,85 netRn6,509 refGene,272 refSeqComposite,1240 tRNAs,92 transMapEnsemblV5,223 transMapEnsemblV5,373 transMapEstV5,192 transMapEstV5,342 transMapRefSeqV5,192 transMapRefSeqV5,342 transMapRnaV5,192 transMapRnaV5,342 transMapV5,107 transMapV5,148 transMapV5,298 transMapV5,448 xenoMrna,27 xenoMrna,301 xenoRefGene,22 xenoRefGene,232 thank ensGene,150 thanks augustusGene,248 geneid,143 genscan,170 nestedRepeats,303 rmsk,326 uniprot,1974 that HLTOGAannotvHg38v1,28 HLTOGAannotvHg38v1,77 HLTOGAannotvHg38v1,284 blastHg18KG,65 blastHg18KG,116 chainCavPor3,22 chainCavPor3,47 chainCavPor3,82 chainCavPor3,143 chainCavPor3,168 chainCavPor3,372 chainCavPor3,399 chainCavPor3,421 chainCavPor3,573 chainCavPor3,831 chainCavPor3,842 chainHg19,20 chainHg19,45 chainHg19,79 chainHg19,139 chainHg19,163 chainHg19,365 chainHg19,392 chainHg19,414 chainHg19,566 chainHg19,822 chainHg19,833 chainMm10,20 chainMm10,45 chainMm10,79 chainMm10,139 chainMm10,163 chainMm10,365 chainMm10,392 chainMm10,414 chainMm10,566 chainMm10,822 chainMm10,833 chainMm39,20 chainMm39,45 chainMm39,79 chainMm39,139 chainMm39,163 chainMm39,365 chainMm39,392 chainMm39,414 chainMm39,566 chainMm39,822 chainMm39,833 chainMonDom5,20 chainMonDom5,45 chainMonDom5,79 chainMonDom5,139 chainMonDom5,163 chainMonDom5,365 chainMonDom5,392 chainMonDom5,414 chainMonDom5,566 chainMonDom5,822 chainMonDom5,833 chainNetCavPor3,25 chainNetCavPor3,50 chainNetCavPor3,85 chainNetCavPor3,146 chainNetCavPor3,171 chainNetCavPor3,375 chainNetCavPor3,402 chainNetCavPor3,424 chainNetCavPor3,576 chainNetCavPor3,834 chainNetCavPor3,845 chainNetHg19,22 chainNetHg19,47 chainNetHg19,81 chainNetHg19,141 chainNetHg19,165 chainNetHg19,367 chainNetHg19,394 chainNetHg19,416 chainNetHg19,568 chainNetHg19,824 chainNetHg19,835 chainNetMm10,22 chainNetMm10,47 chainNetMm10,81 chainNetMm10,141 chainNetMm10,165 chainNetMm10,367 chainNetMm10,394 chainNetMm10,416 chainNetMm10,568 chainNetMm10,824 chainNetMm10,835 chainNetMm39,23 chainNetMm39,48 chainNetMm39,82 chainNetMm39,142 chainNetMm39,166 chainNetMm39,368 chainNetMm39,395 chainNetMm39,417 chainNetMm39,569 chainNetMm39,825 chainNetMm39,836 chainNetMonDom5,23 chainNetMonDom5,48 chainNetMonDom5,82 chainNetMonDom5,142 chainNetMonDom5,166 chainNetMonDom5,368 chainNetMonDom5,395 chainNetMonDom5,417 chainNetMonDom5,569 chainNetMonDom5,825 chainNetMonDom5,836 chainNetRn6,24 chainNetRn6,49 chainNetRn6,84 chainNetRn6,144 chainNetRn6,168 chainNetRn6,371 chainNetRn6,398 chainNetRn6,420 chainNetRn6,572 chainNetRn6,828 chainNetRn6,839 chainRn6,21 chainRn6,46 chainRn6,81 chainRn6,141 chainRn6,165 chainRn6,368 chainRn6,395 chainRn6,417 chainRn6,569 chainRn6,825 chainRn6,836 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 est,36 est,63 est,117 est,224 est,248 est,296 est,311 est,328 est,352 est,370 est,387 est,402 est,655 est,676 genscan,141 gold,64 intronEst,5 intronEst,28 intronEst,48 intronEst,198 intronEst,305 intronEst,329 intronEst,377 intronEst,392 intronEst,409 intronEst,433 intronEst,451 intronEst,468 intronEst,483 intronEst,736 intronEst,757 microsat,15 mrna,44 mrna,63 mrna,170 mrna,194 mrna,242 mrna,257 mrna,274 mrna,298 mrna,316 mrna,333 nestedRepeats,265 nestedRepeats,273 netCavPor3,22 netCavPor3,47 netCavPor3,82 netCavPor3,143 netCavPor3,168 netCavPor3,372 netCavPor3,399 netCavPor3,421 netCavPor3,573 netCavPor3,831 netCavPor3,842 netHg19,20 netHg19,45 netHg19,79 netHg19,139 netHg19,163 netHg19,365 netHg19,392 netHg19,414 netHg19,566 netHg19,822 netHg19,833 netMm10,20 netMm10,45 netMm10,79 netMm10,139 netMm10,163 netMm10,365 netMm10,392 netMm10,414 netMm10,566 netMm10,822 netMm10,833 netMm39,20 netMm39,45 netMm39,79 netMm39,139 netMm39,163 netMm39,365 netMm39,392 netMm39,414 netMm39,566 netMm39,822 netMm39,833 netMonDom5,20 netMonDom5,45 netMonDom5,79 netMonDom5,139 netMonDom5,163 netMonDom5,365 netMonDom5,392 netMonDom5,414 netMonDom5,566 netMonDom5,822 netMonDom5,833 netRn6,21 netRn6,46 netRn6,81 netRn6,141 netRn6,165 netRn6,368 netRn6,395 netRn6,417 netRn6,569 netRn6,825 netRn6,836 refGene,186 refSeqComposite,150 refSeqComposite,170 refSeqComposite,215 refSeqComposite,345 refSeqComposite,388 refSeqComposite,820 refSeqComposite,930 refSeqComposite,1021 refSeqComposite,1029 refSeqComposite,1054 refSeqComposite,1097 refSeqComposite,1617 rmsk,42 rmsk,259 tRNAs,29 tRNAs,79 tRNAs,186 tRNAs,284 tRNAs,296 transMapEnsemblV5,117 transMapEnsemblV5,193 transMapEnsemblV5,497 transMapEstV5,86 transMapEstV5,162 transMapEstV5,466 transMapRefSeqV5,86 transMapRefSeqV5,162 transMapRefSeqV5,466 transMapRnaV5,86 transMapRnaV5,162 transMapRnaV5,466 transMapV5,192 transMapV5,268 transMapV5,572 uniprot,167 uniprot,301 uniprot,696 uniprot,734 uniprot,745 uniprot,999 uniprot,1012 uniprot,1169 uniprot,1408 uniprot,1602 uniprot,1624 uniprot,1738 uniprot,1866 xenoMrna,49 xenoMrna,138 xenoMrna,245 xenoMrna,269 xenoMrna,317 xenoMrna,332 xenoMrna,349 xenoMrna,373 xenoMrna,391 xenoMrna,408 xenoRefGene,146 the HLTOGAannotvHg38v1,67 HLTOGAannotvHg38v1,108 HLTOGAannotvHg38v1,120 HLTOGAannotvHg38v1,125 HLTOGAannotvHg38v1,147 HLTOGAannotvHg38v1,169 HLTOGAannotvHg38v1,174 HLTOGAannotvHg38v1,177 HLTOGAannotvHg38v1,181 HLTOGAannotvHg38v1,195 HLTOGAannotvHg38v1,202 HLTOGAannotvHg38v1,216 HLTOGAannotvHg38v1,221 HLTOGAannotvHg38v1,224 HLTOGAannotvHg38v1,228 HLTOGAannotvHg38v1,243 HLTOGAannotvHg38v1,247 HLTOGAannotvHg38v1,257 HLTOGAannotvHg38v1,285 HLTOGAannotvHg38v1,302 HLTOGAannotvHg38v1,307 HLTOGAannotvHg38v1,320 HLTOGAannotvHg38v1,325 augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 blastHg18KG,20 blastHg18KG,23 blastHg18KG,30 blastHg18KG,37 blastHg18KG,41 blastHg18KG,49 blastHg18KG,53 blastHg18KG,61 blastHg18KG,73 blastHg18KG,77 blastHg18KG,81 blastHg18KG,98 blastHg18KG,109 blastHg18KG,121 blastHg18KG,129 blastHg18KG,142 blastHg18KG,183 chainCavPor3,20 chainCavPor3,39 chainCavPor3,61 chainCavPor3,74 chainCavPor3,121 chainCavPor3,134 chainCavPor3,151 chainCavPor3,159 chainCavPor3,205 chainCavPor3,208 chainCavPor3,234 chainCavPor3,244 chainCavPor3,249 chainCavPor3,257 chainCavPor3,265 chainCavPor3,269 chainCavPor3,279 chainCavPor3,296 chainCavPor3,306 chainCavPor3,320 chainCavPor3,335 chainCavPor3,341 chainCavPor3,344 chainCavPor3,359 chainCavPor3,365 chainCavPor3,369 chainCavPor3,389 chainCavPor3,395 chainCavPor3,409 chainCavPor3,427 chainCavPor3,444 chainCavPor3,447 chainCavPor3,452 chainCavPor3,465 chainCavPor3,478 chainCavPor3,480 chainCavPor3,487 chainCavPor3,490 chainCavPor3,497 chainCavPor3,503 chainCavPor3,516 chainCavPor3,527 chainCavPor3,531 chainCavPor3,534 chainCavPor3,542 chainCavPor3,546 chainCavPor3,552 chainCavPor3,563 chainCavPor3,566 chainCavPor3,578 chainCavPor3,586 chainCavPor3,588 chainCavPor3,596 chainCavPor3,602 chainCavPor3,611 chainCavPor3,614 chainCavPor3,645 chainCavPor3,650 chainCavPor3,659 chainCavPor3,663 chainCavPor3,670 chainCavPor3,693 chainCavPor3,701 chainCavPor3,771 chainCavPor3,775 chainCavPor3,783 chainCavPor3,787 chainCavPor3,791 chainCavPor3,799 chainCavPor3,844 chainCavPor3,854 chainCavPor3,873 chainCavPor3,876 chainCavPor3,888 chainCavPor3,912 chainCavPor3,954 chainCavPor3,960 chainCavPor3,978 chainCavPor3,985 chainCavPor3,997 chainCavPor3,1006 chainCavPor3,1027 chainCavPor3,1067 chainHg19,18 chainHg19,37 chainHg19,59 chainHg19,71 chainHg19,117 chainHg19,130 chainHg19,147 chainHg19,154 chainHg19,200 chainHg19,203 chainHg19,229 chainHg19,239 chainHg19,244 chainHg19,252 chainHg19,260 chainHg19,264 chainHg19,273 chainHg19,290 chainHg19,299 chainHg19,313 chainHg19,328 chainHg19,334 chainHg19,337 chainHg19,352 chainHg19,358 chainHg19,362 chainHg19,382 chainHg19,388 chainHg19,402 chainHg19,420 chainHg19,437 chainHg19,440 chainHg19,445 chainHg19,458 chainHg19,471 chainHg19,473 chainHg19,480 chainHg19,483 chainHg19,490 chainHg19,496 chainHg19,509 chainHg19,520 chainHg19,524 chainHg19,527 chainHg19,535 chainHg19,539 chainHg19,545 chainHg19,556 chainHg19,559 chainHg19,571 chainHg19,578 chainHg19,580 chainHg19,588 chainHg19,594 chainHg19,603 chainHg19,606 chainHg19,636 chainHg19,641 chainHg19,650 chainHg19,654 chainHg19,661 chainHg19,684 chainHg19,692 chainHg19,762 chainHg19,766 chainHg19,774 chainHg19,778 chainHg19,782 chainHg19,790 chainHg19,835 chainHg19,845 chainHg19,864 chainHg19,867 chainHg19,879 chainHg19,903 chainHg19,945 chainHg19,951 chainHg19,969 chainHg19,976 chainHg19,988 chainHg19,997 chainHg19,1018 chainHg19,1058 chainMm10,18 chainMm10,37 chainMm10,59 chainMm10,71 chainMm10,117 chainMm10,130 chainMm10,147 chainMm10,154 chainMm10,200 chainMm10,203 chainMm10,229 chainMm10,239 chainMm10,244 chainMm10,252 chainMm10,260 chainMm10,264 chainMm10,273 chainMm10,290 chainMm10,299 chainMm10,313 chainMm10,328 chainMm10,334 chainMm10,337 chainMm10,352 chainMm10,358 chainMm10,362 chainMm10,382 chainMm10,388 chainMm10,402 chainMm10,420 chainMm10,437 chainMm10,440 chainMm10,445 chainMm10,458 chainMm10,471 chainMm10,473 chainMm10,480 chainMm10,483 chainMm10,490 chainMm10,496 chainMm10,509 chainMm10,520 chainMm10,524 chainMm10,527 chainMm10,535 chainMm10,539 chainMm10,545 chainMm10,556 chainMm10,559 chainMm10,571 chainMm10,578 chainMm10,580 chainMm10,588 chainMm10,594 chainMm10,603 chainMm10,606 chainMm10,636 chainMm10,641 chainMm10,650 chainMm10,654 chainMm10,661 chainMm10,684 chainMm10,692 chainMm10,762 chainMm10,766 chainMm10,774 chainMm10,778 chainMm10,782 chainMm10,790 chainMm10,835 chainMm10,845 chainMm10,864 chainMm10,867 chainMm10,879 chainMm10,903 chainMm10,945 chainMm10,951 chainMm10,969 chainMm10,976 chainMm10,988 chainMm10,997 chainMm10,1018 chainMm10,1058 chainMm39,18 chainMm39,37 chainMm39,59 chainMm39,71 chainMm39,117 chainMm39,130 chainMm39,147 chainMm39,154 chainMm39,200 chainMm39,203 chainMm39,229 chainMm39,239 chainMm39,244 chainMm39,252 chainMm39,260 chainMm39,264 chainMm39,273 chainMm39,290 chainMm39,299 chainMm39,313 chainMm39,328 chainMm39,334 chainMm39,337 chainMm39,352 chainMm39,358 chainMm39,362 chainMm39,382 chainMm39,388 chainMm39,402 chainMm39,420 chainMm39,437 chainMm39,440 chainMm39,445 chainMm39,458 chainMm39,471 chainMm39,473 chainMm39,480 chainMm39,483 chainMm39,490 chainMm39,496 chainMm39,509 chainMm39,520 chainMm39,524 chainMm39,527 chainMm39,535 chainMm39,539 chainMm39,545 chainMm39,556 chainMm39,559 chainMm39,571 chainMm39,578 chainMm39,580 chainMm39,588 chainMm39,594 chainMm39,603 chainMm39,606 chainMm39,636 chainMm39,641 chainMm39,650 chainMm39,654 chainMm39,661 chainMm39,684 chainMm39,692 chainMm39,762 chainMm39,766 chainMm39,774 chainMm39,778 chainMm39,782 chainMm39,790 chainMm39,835 chainMm39,845 chainMm39,864 chainMm39,867 chainMm39,879 chainMm39,903 chainMm39,945 chainMm39,951 chainMm39,969 chainMm39,976 chainMm39,988 chainMm39,997 chainMm39,1018 chainMm39,1058 chainMonDom5,18 chainMonDom5,37 chainMonDom5,59 chainMonDom5,71 chainMonDom5,117 chainMonDom5,130 chainMonDom5,147 chainMonDom5,154 chainMonDom5,200 chainMonDom5,203 chainMonDom5,229 chainMonDom5,239 chainMonDom5,244 chainMonDom5,252 chainMonDom5,260 chainMonDom5,264 chainMonDom5,273 chainMonDom5,290 chainMonDom5,299 chainMonDom5,313 chainMonDom5,328 chainMonDom5,334 chainMonDom5,337 chainMonDom5,352 chainMonDom5,358 chainMonDom5,362 chainMonDom5,382 chainMonDom5,388 chainMonDom5,402 chainMonDom5,420 chainMonDom5,437 chainMonDom5,440 chainMonDom5,445 chainMonDom5,458 chainMonDom5,471 chainMonDom5,473 chainMonDom5,480 chainMonDom5,483 chainMonDom5,490 chainMonDom5,496 chainMonDom5,509 chainMonDom5,520 chainMonDom5,524 chainMonDom5,527 chainMonDom5,535 chainMonDom5,539 chainMonDom5,545 chainMonDom5,556 chainMonDom5,559 chainMonDom5,571 chainMonDom5,578 chainMonDom5,580 chainMonDom5,588 chainMonDom5,594 chainMonDom5,603 chainMonDom5,606 chainMonDom5,636 chainMonDom5,641 chainMonDom5,650 chainMonDom5,654 chainMonDom5,661 chainMonDom5,684 chainMonDom5,692 chainMonDom5,762 chainMonDom5,766 chainMonDom5,774 chainMonDom5,778 chainMonDom5,782 chainMonDom5,790 chainMonDom5,835 chainMonDom5,845 chainMonDom5,864 chainMonDom5,867 chainMonDom5,879 chainMonDom5,903 chainMonDom5,945 chainMonDom5,951 chainMonDom5,969 chainMonDom5,976 chainMonDom5,988 chainMonDom5,997 chainMonDom5,1018 chainMonDom5,1058 chainNetCavPor3,23 chainNetCavPor3,42 chainNetCavPor3,64 chainNetCavPor3,77 chainNetCavPor3,124 chainNetCavPor3,137 chainNetCavPor3,154 chainNetCavPor3,162 chainNetCavPor3,208 chainNetCavPor3,211 chainNetCavPor3,237 chainNetCavPor3,247 chainNetCavPor3,252 chainNetCavPor3,260 chainNetCavPor3,268 chainNetCavPor3,272 chainNetCavPor3,282 chainNetCavPor3,299 chainNetCavPor3,309 chainNetCavPor3,323 chainNetCavPor3,338 chainNetCavPor3,344 chainNetCavPor3,347 chainNetCavPor3,362 chainNetCavPor3,368 chainNetCavPor3,372 chainNetCavPor3,392 chainNetCavPor3,398 chainNetCavPor3,412 chainNetCavPor3,430 chainNetCavPor3,447 chainNetCavPor3,450 chainNetCavPor3,455 chainNetCavPor3,468 chainNetCavPor3,481 chainNetCavPor3,483 chainNetCavPor3,490 chainNetCavPor3,493 chainNetCavPor3,500 chainNetCavPor3,506 chainNetCavPor3,519 chainNetCavPor3,530 chainNetCavPor3,534 chainNetCavPor3,537 chainNetCavPor3,545 chainNetCavPor3,549 chainNetCavPor3,555 chainNetCavPor3,566 chainNetCavPor3,569 chainNetCavPor3,581 chainNetCavPor3,589 chainNetCavPor3,591 chainNetCavPor3,599 chainNetCavPor3,605 chainNetCavPor3,614 chainNetCavPor3,617 chainNetCavPor3,648 chainNetCavPor3,653 chainNetCavPor3,662 chainNetCavPor3,666 chainNetCavPor3,673 chainNetCavPor3,696 chainNetCavPor3,704 chainNetCavPor3,774 chainNetCavPor3,778 chainNetCavPor3,786 chainNetCavPor3,790 chainNetCavPor3,794 chainNetCavPor3,802 chainNetCavPor3,847 chainNetCavPor3,857 chainNetCavPor3,876 chainNetCavPor3,879 chainNetCavPor3,891 chainNetCavPor3,915 chainNetCavPor3,957 chainNetCavPor3,963 chainNetCavPor3,981 chainNetCavPor3,988 chainNetCavPor3,1000 chainNetCavPor3,1009 chainNetCavPor3,1030 chainNetCavPor3,1070 chainNetHg19,20 chainNetHg19,39 chainNetHg19,61 chainNetHg19,73 chainNetHg19,119 chainNetHg19,132 chainNetHg19,149 chainNetHg19,156 chainNetHg19,202 chainNetHg19,205 chainNetHg19,231 chainNetHg19,241 chainNetHg19,246 chainNetHg19,254 chainNetHg19,262 chainNetHg19,266 chainNetHg19,275 chainNetHg19,292 chainNetHg19,301 chainNetHg19,315 chainNetHg19,330 chainNetHg19,336 chainNetHg19,339 chainNetHg19,354 chainNetHg19,360 chainNetHg19,364 chainNetHg19,384 chainNetHg19,390 chainNetHg19,404 chainNetHg19,422 chainNetHg19,439 chainNetHg19,442 chainNetHg19,447 chainNetHg19,460 chainNetHg19,473 chainNetHg19,475 chainNetHg19,482 chainNetHg19,485 chainNetHg19,492 chainNetHg19,498 chainNetHg19,511 chainNetHg19,522 chainNetHg19,526 chainNetHg19,529 chainNetHg19,537 chainNetHg19,541 chainNetHg19,547 chainNetHg19,558 chainNetHg19,561 chainNetHg19,573 chainNetHg19,580 chainNetHg19,582 chainNetHg19,590 chainNetHg19,596 chainNetHg19,605 chainNetHg19,608 chainNetHg19,638 chainNetHg19,643 chainNetHg19,652 chainNetHg19,656 chainNetHg19,663 chainNetHg19,686 chainNetHg19,694 chainNetHg19,764 chainNetHg19,768 chainNetHg19,776 chainNetHg19,780 chainNetHg19,784 chainNetHg19,792 chainNetHg19,837 chainNetHg19,847 chainNetHg19,866 chainNetHg19,869 chainNetHg19,881 chainNetHg19,905 chainNetHg19,947 chainNetHg19,953 chainNetHg19,971 chainNetHg19,978 chainNetHg19,990 chainNetHg19,999 chainNetHg19,1020 chainNetHg19,1060 chainNetMm10,20 chainNetMm10,39 chainNetMm10,61 chainNetMm10,73 chainNetMm10,119 chainNetMm10,132 chainNetMm10,149 chainNetMm10,156 chainNetMm10,202 chainNetMm10,205 chainNetMm10,231 chainNetMm10,241 chainNetMm10,246 chainNetMm10,254 chainNetMm10,262 chainNetMm10,266 chainNetMm10,275 chainNetMm10,292 chainNetMm10,301 chainNetMm10,315 chainNetMm10,330 chainNetMm10,336 chainNetMm10,339 chainNetMm10,354 chainNetMm10,360 chainNetMm10,364 chainNetMm10,384 chainNetMm10,390 chainNetMm10,404 chainNetMm10,422 chainNetMm10,439 chainNetMm10,442 chainNetMm10,447 chainNetMm10,460 chainNetMm10,473 chainNetMm10,475 chainNetMm10,482 chainNetMm10,485 chainNetMm10,492 chainNetMm10,498 chainNetMm10,511 chainNetMm10,522 chainNetMm10,526 chainNetMm10,529 chainNetMm10,537 chainNetMm10,541 chainNetMm10,547 chainNetMm10,558 chainNetMm10,561 chainNetMm10,573 chainNetMm10,580 chainNetMm10,582 chainNetMm10,590 chainNetMm10,596 chainNetMm10,605 chainNetMm10,608 chainNetMm10,638 chainNetMm10,643 chainNetMm10,652 chainNetMm10,656 chainNetMm10,663 chainNetMm10,686 chainNetMm10,694 chainNetMm10,764 chainNetMm10,768 chainNetMm10,776 chainNetMm10,780 chainNetMm10,784 chainNetMm10,792 chainNetMm10,837 chainNetMm10,847 chainNetMm10,866 chainNetMm10,869 chainNetMm10,881 chainNetMm10,905 chainNetMm10,947 chainNetMm10,953 chainNetMm10,971 chainNetMm10,978 chainNetMm10,990 chainNetMm10,999 chainNetMm10,1020 chainNetMm10,1060 chainNetMm39,21 chainNetMm39,40 chainNetMm39,62 chainNetMm39,74 chainNetMm39,120 chainNetMm39,133 chainNetMm39,150 chainNetMm39,157 chainNetMm39,203 chainNetMm39,206 chainNetMm39,232 chainNetMm39,242 chainNetMm39,247 chainNetMm39,255 chainNetMm39,263 chainNetMm39,267 chainNetMm39,276 chainNetMm39,293 chainNetMm39,302 chainNetMm39,316 chainNetMm39,331 chainNetMm39,337 chainNetMm39,340 chainNetMm39,355 chainNetMm39,361 chainNetMm39,365 chainNetMm39,385 chainNetMm39,391 chainNetMm39,405 chainNetMm39,423 chainNetMm39,440 chainNetMm39,443 chainNetMm39,448 chainNetMm39,461 chainNetMm39,474 chainNetMm39,476 chainNetMm39,483 chainNetMm39,486 chainNetMm39,493 chainNetMm39,499 chainNetMm39,512 chainNetMm39,523 chainNetMm39,527 chainNetMm39,530 chainNetMm39,538 chainNetMm39,542 chainNetMm39,548 chainNetMm39,559 chainNetMm39,562 chainNetMm39,574 chainNetMm39,581 chainNetMm39,583 chainNetMm39,591 chainNetMm39,597 chainNetMm39,606 chainNetMm39,609 chainNetMm39,639 chainNetMm39,644 chainNetMm39,653 chainNetMm39,657 chainNetMm39,664 chainNetMm39,687 chainNetMm39,695 chainNetMm39,765 chainNetMm39,769 chainNetMm39,777 chainNetMm39,781 chainNetMm39,785 chainNetMm39,793 chainNetMm39,838 chainNetMm39,848 chainNetMm39,867 chainNetMm39,870 chainNetMm39,882 chainNetMm39,906 chainNetMm39,948 chainNetMm39,954 chainNetMm39,972 chainNetMm39,979 chainNetMm39,991 chainNetMm39,1000 chainNetMm39,1021 chainNetMm39,1061 chainNetMonDom5,21 chainNetMonDom5,40 chainNetMonDom5,62 chainNetMonDom5,74 chainNetMonDom5,120 chainNetMonDom5,133 chainNetMonDom5,150 chainNetMonDom5,157 chainNetMonDom5,203 chainNetMonDom5,206 chainNetMonDom5,232 chainNetMonDom5,242 chainNetMonDom5,247 chainNetMonDom5,255 chainNetMonDom5,263 chainNetMonDom5,267 chainNetMonDom5,276 chainNetMonDom5,293 chainNetMonDom5,302 chainNetMonDom5,316 chainNetMonDom5,331 chainNetMonDom5,337 chainNetMonDom5,340 chainNetMonDom5,355 chainNetMonDom5,361 chainNetMonDom5,365 chainNetMonDom5,385 chainNetMonDom5,391 chainNetMonDom5,405 chainNetMonDom5,423 chainNetMonDom5,440 chainNetMonDom5,443 chainNetMonDom5,448 chainNetMonDom5,461 chainNetMonDom5,474 chainNetMonDom5,476 chainNetMonDom5,483 chainNetMonDom5,486 chainNetMonDom5,493 chainNetMonDom5,499 chainNetMonDom5,512 chainNetMonDom5,523 chainNetMonDom5,527 chainNetMonDom5,530 chainNetMonDom5,538 chainNetMonDom5,542 chainNetMonDom5,548 chainNetMonDom5,559 chainNetMonDom5,562 chainNetMonDom5,574 chainNetMonDom5,581 chainNetMonDom5,583 chainNetMonDom5,591 chainNetMonDom5,597 chainNetMonDom5,606 chainNetMonDom5,609 chainNetMonDom5,639 chainNetMonDom5,644 chainNetMonDom5,653 chainNetMonDom5,657 chainNetMonDom5,664 chainNetMonDom5,687 chainNetMonDom5,695 chainNetMonDom5,765 chainNetMonDom5,769 chainNetMonDom5,777 chainNetMonDom5,781 chainNetMonDom5,785 chainNetMonDom5,793 chainNetMonDom5,838 chainNetMonDom5,848 chainNetMonDom5,867 chainNetMonDom5,870 chainNetMonDom5,882 chainNetMonDom5,906 chainNetMonDom5,948 chainNetMonDom5,954 chainNetMonDom5,972 chainNetMonDom5,979 chainNetMonDom5,991 chainNetMonDom5,1000 chainNetMonDom5,1021 chainNetMonDom5,1061 chainNetRn6,22 chainNetRn6,41 chainNetRn6,63 chainNetRn6,76 chainNetRn6,122 chainNetRn6,135 chainNetRn6,152 chainNetRn6,159 chainNetRn6,205 chainNetRn6,208 chainNetRn6,234 chainNetRn6,244 chainNetRn6,249 chainNetRn6,257 chainNetRn6,265 chainNetRn6,269 chainNetRn6,278 chainNetRn6,295 chainNetRn6,304 chainNetRn6,319 chainNetRn6,334 chainNetRn6,340 chainNetRn6,343 chainNetRn6,358 chainNetRn6,364 chainNetRn6,368 chainNetRn6,388 chainNetRn6,394 chainNetRn6,408 chainNetRn6,426 chainNetRn6,443 chainNetRn6,446 chainNetRn6,451 chainNetRn6,464 chainNetRn6,477 chainNetRn6,479 chainNetRn6,486 chainNetRn6,489 chainNetRn6,496 chainNetRn6,502 chainNetRn6,515 chainNetRn6,526 chainNetRn6,530 chainNetRn6,533 chainNetRn6,541 chainNetRn6,545 chainNetRn6,551 chainNetRn6,562 chainNetRn6,565 chainNetRn6,577 chainNetRn6,584 chainNetRn6,586 chainNetRn6,594 chainNetRn6,600 chainNetRn6,609 chainNetRn6,612 chainNetRn6,642 chainNetRn6,647 chainNetRn6,656 chainNetRn6,660 chainNetRn6,667 chainNetRn6,690 chainNetRn6,698 chainNetRn6,768 chainNetRn6,772 chainNetRn6,780 chainNetRn6,784 chainNetRn6,788 chainNetRn6,796 chainNetRn6,841 chainNetRn6,851 chainNetRn6,870 chainNetRn6,873 chainNetRn6,885 chainNetRn6,909 chainNetRn6,951 chainNetRn6,957 chainNetRn6,975 chainNetRn6,982 chainNetRn6,994 chainNetRn6,1003 chainNetRn6,1024 chainNetRn6,1064 chainRn6,19 chainRn6,38 chainRn6,60 chainRn6,73 chainRn6,119 chainRn6,132 chainRn6,149 chainRn6,156 chainRn6,202 chainRn6,205 chainRn6,231 chainRn6,241 chainRn6,246 chainRn6,254 chainRn6,262 chainRn6,266 chainRn6,275 chainRn6,292 chainRn6,301 chainRn6,316 chainRn6,331 chainRn6,337 chainRn6,340 chainRn6,355 chainRn6,361 chainRn6,365 chainRn6,385 chainRn6,391 chainRn6,405 chainRn6,423 chainRn6,440 chainRn6,443 chainRn6,448 chainRn6,461 chainRn6,474 chainRn6,476 chainRn6,483 chainRn6,486 chainRn6,493 chainRn6,499 chainRn6,512 chainRn6,523 chainRn6,527 chainRn6,530 chainRn6,538 chainRn6,542 chainRn6,548 chainRn6,559 chainRn6,562 chainRn6,574 chainRn6,581 chainRn6,583 chainRn6,591 chainRn6,597 chainRn6,606 chainRn6,609 chainRn6,639 chainRn6,644 chainRn6,653 chainRn6,657 chainRn6,664 chainRn6,687 chainRn6,695 chainRn6,765 chainRn6,769 chainRn6,777 chainRn6,781 chainRn6,785 chainRn6,793 chainRn6,838 chainRn6,848 chainRn6,867 chainRn6,870 chainRn6,882 chainRn6,906 chainRn6,948 chainRn6,954 chainRn6,972 chainRn6,979 chainRn6,991 chainRn6,1000 chainRn6,1021 chainRn6,1061 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ctgPos2,11 ctgPos2,18 ctgPos2,25 ensGene,21 ensGene,34 ensGene,51 ensGene,65 ensGene,69 ensGene,75 ensGene,101 ensGene,107 ensGene,190 est,24 est,50 est,61 est,73 est,77 est,80 est,83 est,86 est,95 est,100 est,108 est,123 est,127 est,137 est,149 est,159 est,164 est,174 est,179 est,186 est,197 est,200 est,203 est,208 est,218 est,221 est,227 est,237 est,244 est,253 est,274 est,284 est,316 est,323 est,337 est,346 est,354 est,363 est,372 est,389 est,396 est,405 est,416 est,437 est,460 est,474 est,488 est,499 est,505 est,515 est,519 est,530 est,534 est,541 est,550 est,554 est,564 est,584 est,610 est,616 est,650 est,656 est,688 est,691 est,707 est,716 est,734 est,800 gap,13 gap,25 gap,31 gap,37 gap,57 gap,61 gap,66 gap,75 gap,92 gap,118 gap,142 gap,159 gap,161 gc5Base,12 gc5Base,17 gc5Base,53 gc5Base,57 gc5Base,68 gc5Base,72 geneid,17 geneid,36 geneid,67 geneid,81 geneid,93 geneid,99 geneid,102 geneid,105 geneid,109 geneid,110 geneid,122 geneid,127 geneid,133 geneid,136 geneid,139 genscan,16 genscan,23 genscan,38 genscan,53 genscan,68 genscan,75 genscan,80 genscan,91 genscan,115 genscan,135 genscan,139 genscan,151 genscan,155 genscan,176 gold,12 gold,16 gold,39 gold,62 gold,67 gold,76 gold,93 gold,98 gold,104 gold,118 gold,123 gold,141 intronEst,26 intronEst,36 intronEst,71 intronEst,94 intronEst,99 intronEst,106 intronEst,123 intronEst,134 intronEst,154 intronEst,158 intronEst,161 intronEst,164 intronEst,167 intronEst,176 intronEst,181 intronEst,189 intronEst,204 intronEst,208 intronEst,218 intronEst,230 intronEst,240 intronEst,245 intronEst,255 intronEst,260 intronEst,267 intronEst,278 intronEst,281 intronEst,284 intronEst,289 intronEst,299 intronEst,302 intronEst,308 intronEst,318 intronEst,325 intronEst,334 intronEst,355 intronEst,365 intronEst,397 intronEst,404 intronEst,418 intronEst,427 intronEst,435 intronEst,444 intronEst,453 intronEst,470 intronEst,477 intronEst,486 intronEst,497 intronEst,518 intronEst,541 intronEst,555 intronEst,569 intronEst,580 intronEst,586 intronEst,596 intronEst,600 intronEst,611 intronEst,615 intronEst,622 intronEst,631 intronEst,635 intronEst,645 intronEst,665 intronEst,691 intronEst,697 intronEst,731 intronEst,737 intronEst,769 intronEst,772 intronEst,788 intronEst,797 intronEst,818 intronEst,884 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,11 mrna,22 mrna,31 mrna,42 mrna,54 mrna,69 mrna,73 mrna,83 mrna,95 mrna,105 mrna,110 mrna,120 mrna,125 mrna,132 mrna,143 mrna,146 mrna,149 mrna,154 mrna,164 mrna,167 mrna,173 mrna,183 mrna,190 mrna,199 mrna,220 mrna,230 mrna,262 mrna,269 mrna,283 mrna,292 mrna,300 mrna,309 mrna,318 mrna,335 mrna,342 mrna,353 mrna,376 mrna,390 mrna,393 mrna,404 mrna,407 mrna,423 mrna,432 mrna,438 mrna,451 mrna,517 ncbiRefSeqGenomicDiff,9 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netCavPor3,20 netCavPor3,39 netCavPor3,61 netCavPor3,74 netCavPor3,121 netCavPor3,134 netCavPor3,151 netCavPor3,159 netCavPor3,205 netCavPor3,208 netCavPor3,234 netCavPor3,244 netCavPor3,249 netCavPor3,257 netCavPor3,265 netCavPor3,269 netCavPor3,279 netCavPor3,296 netCavPor3,306 netCavPor3,320 netCavPor3,335 netCavPor3,341 netCavPor3,344 netCavPor3,359 netCavPor3,365 netCavPor3,369 netCavPor3,389 netCavPor3,395 netCavPor3,409 netCavPor3,427 netCavPor3,444 netCavPor3,447 netCavPor3,452 netCavPor3,465 netCavPor3,478 netCavPor3,480 netCavPor3,487 netCavPor3,490 netCavPor3,497 netCavPor3,503 netCavPor3,516 netCavPor3,527 netCavPor3,531 netCavPor3,534 netCavPor3,542 netCavPor3,546 netCavPor3,552 netCavPor3,563 netCavPor3,566 netCavPor3,578 netCavPor3,586 netCavPor3,588 netCavPor3,596 netCavPor3,602 netCavPor3,611 netCavPor3,614 netCavPor3,645 netCavPor3,650 netCavPor3,659 netCavPor3,663 netCavPor3,670 netCavPor3,693 netCavPor3,701 netCavPor3,771 netCavPor3,775 netCavPor3,783 netCavPor3,787 netCavPor3,791 netCavPor3,799 netCavPor3,844 netCavPor3,854 netCavPor3,873 netCavPor3,876 netCavPor3,888 netCavPor3,912 netCavPor3,954 netCavPor3,960 netCavPor3,978 netCavPor3,985 netCavPor3,997 netCavPor3,1006 netCavPor3,1027 netCavPor3,1067 netHg19,18 netHg19,37 netHg19,59 netHg19,71 netHg19,117 netHg19,130 netHg19,147 netHg19,154 netHg19,200 netHg19,203 netHg19,229 netHg19,239 netHg19,244 netHg19,252 netHg19,260 netHg19,264 netHg19,273 netHg19,290 netHg19,299 netHg19,313 netHg19,328 netHg19,334 netHg19,337 netHg19,352 netHg19,358 netHg19,362 netHg19,382 netHg19,388 netHg19,402 netHg19,420 netHg19,437 netHg19,440 netHg19,445 netHg19,458 netHg19,471 netHg19,473 netHg19,480 netHg19,483 netHg19,490 netHg19,496 netHg19,509 netHg19,520 netHg19,524 netHg19,527 netHg19,535 netHg19,539 netHg19,545 netHg19,556 netHg19,559 netHg19,571 netHg19,578 netHg19,580 netHg19,588 netHg19,594 netHg19,603 netHg19,606 netHg19,636 netHg19,641 netHg19,650 netHg19,654 netHg19,661 netHg19,684 netHg19,692 netHg19,762 netHg19,766 netHg19,774 netHg19,778 netHg19,782 netHg19,790 netHg19,835 netHg19,845 netHg19,864 netHg19,867 netHg19,879 netHg19,903 netHg19,945 netHg19,951 netHg19,969 netHg19,976 netHg19,988 netHg19,997 netHg19,1018 netHg19,1058 netMm10,18 netMm10,37 netMm10,59 netMm10,71 netMm10,117 netMm10,130 netMm10,147 netMm10,154 netMm10,200 netMm10,203 netMm10,229 netMm10,239 netMm10,244 netMm10,252 netMm10,260 netMm10,264 netMm10,273 netMm10,290 netMm10,299 netMm10,313 netMm10,328 netMm10,334 netMm10,337 netMm10,352 netMm10,358 netMm10,362 netMm10,382 netMm10,388 netMm10,402 netMm10,420 netMm10,437 netMm10,440 netMm10,445 netMm10,458 netMm10,471 netMm10,473 netMm10,480 netMm10,483 netMm10,490 netMm10,496 netMm10,509 netMm10,520 netMm10,524 netMm10,527 netMm10,535 netMm10,539 netMm10,545 netMm10,556 netMm10,559 netMm10,571 netMm10,578 netMm10,580 netMm10,588 netMm10,594 netMm10,603 netMm10,606 netMm10,636 netMm10,641 netMm10,650 netMm10,654 netMm10,661 netMm10,684 netMm10,692 netMm10,762 netMm10,766 netMm10,774 netMm10,778 netMm10,782 netMm10,790 netMm10,835 netMm10,845 netMm10,864 netMm10,867 netMm10,879 netMm10,903 netMm10,945 netMm10,951 netMm10,969 netMm10,976 netMm10,988 netMm10,997 netMm10,1018 netMm10,1058 netMm39,18 netMm39,37 netMm39,59 netMm39,71 netMm39,117 netMm39,130 netMm39,147 netMm39,154 netMm39,200 netMm39,203 netMm39,229 netMm39,239 netMm39,244 netMm39,252 netMm39,260 netMm39,264 netMm39,273 netMm39,290 netMm39,299 netMm39,313 netMm39,328 netMm39,334 netMm39,337 netMm39,352 netMm39,358 netMm39,362 netMm39,382 netMm39,388 netMm39,402 netMm39,420 netMm39,437 netMm39,440 netMm39,445 netMm39,458 netMm39,471 netMm39,473 netMm39,480 netMm39,483 netMm39,490 netMm39,496 netMm39,509 netMm39,520 netMm39,524 netMm39,527 netMm39,535 netMm39,539 netMm39,545 netMm39,556 netMm39,559 netMm39,571 netMm39,578 netMm39,580 netMm39,588 netMm39,594 netMm39,603 netMm39,606 netMm39,636 netMm39,641 netMm39,650 netMm39,654 netMm39,661 netMm39,684 netMm39,692 netMm39,762 netMm39,766 netMm39,774 netMm39,778 netMm39,782 netMm39,790 netMm39,835 netMm39,845 netMm39,864 netMm39,867 netMm39,879 netMm39,903 netMm39,945 netMm39,951 netMm39,969 netMm39,976 netMm39,988 netMm39,997 netMm39,1018 netMm39,1058 netMonDom5,18 netMonDom5,37 netMonDom5,59 netMonDom5,71 netMonDom5,117 netMonDom5,130 netMonDom5,147 netMonDom5,154 netMonDom5,200 netMonDom5,203 netMonDom5,229 netMonDom5,239 netMonDom5,244 netMonDom5,252 netMonDom5,260 netMonDom5,264 netMonDom5,273 netMonDom5,290 netMonDom5,299 netMonDom5,313 netMonDom5,328 netMonDom5,334 netMonDom5,337 netMonDom5,352 netMonDom5,358 netMonDom5,362 netMonDom5,382 netMonDom5,388 netMonDom5,402 netMonDom5,420 netMonDom5,437 netMonDom5,440 netMonDom5,445 netMonDom5,458 netMonDom5,471 netMonDom5,473 netMonDom5,480 netMonDom5,483 netMonDom5,490 netMonDom5,496 netMonDom5,509 netMonDom5,520 netMonDom5,524 netMonDom5,527 netMonDom5,535 netMonDom5,539 netMonDom5,545 netMonDom5,556 netMonDom5,559 netMonDom5,571 netMonDom5,578 netMonDom5,580 netMonDom5,588 netMonDom5,594 netMonDom5,603 netMonDom5,606 netMonDom5,636 netMonDom5,641 netMonDom5,650 netMonDom5,654 netMonDom5,661 netMonDom5,684 netMonDom5,692 netMonDom5,762 netMonDom5,766 netMonDom5,774 netMonDom5,778 netMonDom5,782 netMonDom5,790 netMonDom5,835 netMonDom5,845 netMonDom5,864 netMonDom5,867 netMonDom5,879 netMonDom5,903 netMonDom5,945 netMonDom5,951 netMonDom5,969 netMonDom5,976 netMonDom5,988 netMonDom5,997 netMonDom5,1018 netMonDom5,1058 netRn6,19 netRn6,38 netRn6,60 netRn6,73 netRn6,119 netRn6,132 netRn6,149 netRn6,156 netRn6,202 netRn6,205 netRn6,231 netRn6,241 netRn6,246 netRn6,254 netRn6,262 netRn6,266 netRn6,275 netRn6,292 netRn6,301 netRn6,316 netRn6,331 netRn6,337 netRn6,340 netRn6,355 netRn6,361 netRn6,365 netRn6,385 netRn6,391 netRn6,405 netRn6,423 netRn6,440 netRn6,443 netRn6,448 netRn6,461 netRn6,474 netRn6,476 netRn6,483 netRn6,486 netRn6,493 netRn6,499 netRn6,512 netRn6,523 netRn6,527 netRn6,530 netRn6,538 netRn6,542 netRn6,548 netRn6,559 netRn6,562 netRn6,574 netRn6,581 netRn6,583 netRn6,591 netRn6,597 netRn6,606 netRn6,609 netRn6,639 netRn6,644 netRn6,653 netRn6,657 netRn6,664 netRn6,687 netRn6,695 netRn6,765 netRn6,769 netRn6,777 netRn6,781 netRn6,785 netRn6,793 netRn6,838 netRn6,848 netRn6,867 netRn6,870 netRn6,882 netRn6,906 netRn6,948 netRn6,954 netRn6,972 netRn6,979 netRn6,991 netRn6,1000 netRn6,1021 netRn6,1061 quality,11 quality,16 quality,24 quality,26 quality,32 quality,35 quality,38 quality,47 quality,50 quality,68 quality,72 quality,81 quality,85 quality,93 quality,96 refGene,16 refGene,29 refGene,36 refGene,46 refGene,73 refGene,88 refGene,95 refGene,99 refGene,103 refGene,114 refGene,129 refGene,132 refGene,135 refGene,149 refGene,155 refGene,160 refGene,165 refGene,173 refGene,201 refGene,206 refGene,221 refGene,236 refGene,249 refGene,261 refGene,284 refGene,287 refGene,303 refGene,312 refGene,335 refGene,343 refSeqComposite,12 refSeqComposite,26 refSeqComposite,42 refSeqComposite,51 refSeqComposite,55 refSeqComposite,65 refSeqComposite,89 refSeqComposite,97 refSeqComposite,132 refSeqComposite,164 refSeqComposite,168 refSeqComposite,184 refSeqComposite,239 refSeqComposite,280 refSeqComposite,283 refSeqComposite,289 refSeqComposite,306 refSeqComposite,312 refSeqComposite,324 refSeqComposite,332 refSeqComposite,368 refSeqComposite,372 refSeqComposite,385 refSeqComposite,392 refSeqComposite,397 refSeqComposite,401 refSeqComposite,440 refSeqComposite,445 refSeqComposite,449 refSeqComposite,461 refSeqComposite,494 refSeqComposite,503 refSeqComposite,525 refSeqComposite,556 refSeqComposite,567 refSeqComposite,575 refSeqComposite,583 refSeqComposite,595 refSeqComposite,602 refSeqComposite,606 refSeqComposite,610 refSeqComposite,631 refSeqComposite,644 refSeqComposite,654 refSeqComposite,667 refSeqComposite,678 refSeqComposite,692 refSeqComposite,707 refSeqComposite,712 refSeqComposite,728 refSeqComposite,732 refSeqComposite,735 refSeqComposite,741 refSeqComposite,748 refSeqComposite,753 refSeqComposite,757 refSeqComposite,770 refSeqComposite,776 refSeqComposite,784 refSeqComposite,796 refSeqComposite,807 refSeqComposite,835 refSeqComposite,840 refSeqComposite,855 refSeqComposite,864 refSeqComposite,875 refSeqComposite,880 refSeqComposite,884 refSeqComposite,903 refSeqComposite,909 refSeqComposite,917 refSeqComposite,923 refSeqComposite,973 refSeqComposite,997 refSeqComposite,1001 refSeqComposite,1004 refSeqComposite,1008 refSeqComposite,1012 refSeqComposite,1047 refSeqComposite,1059 refSeqComposite,1106 refSeqComposite,1111 refSeqComposite,1117 refSeqComposite,1126 refSeqComposite,1140 refSeqComposite,1155 refSeqComposite,1172 refSeqComposite,1181 refSeqComposite,1186 refSeqComposite,1194 refSeqComposite,1208 refSeqComposite,1216 refSeqComposite,1229 refSeqComposite,1252 refSeqComposite,1255 refSeqComposite,1271 refSeqComposite,1280 refSeqComposite,1287 refSeqComposite,1305 refSeqComposite,1313 refSeqComposite,1334 refSeqComposite,1341 refSeqComposite,1362 refSeqComposite,1365 refSeqComposite,1382 refSeqComposite,1392 refSeqComposite,1421 refSeqComposite,1444 refSeqComposite,1460 refSeqComposite,1465 refSeqComposite,1468 refSeqComposite,1493 refSeqComposite,1511 refSeqComposite,1524 refSeqComposite,1542 refSeqComposite,1567 refSeqComposite,1572 refSeqComposite,1576 refSeqComposite,1588 refSeqComposite,1593 refSeqComposite,1597 refSeqComposite,1601 refSeqComposite,1607 refSeqComposite,1639 refSeqComposite,1644 refSeqComposite,1647 refSeqComposite,1654 refSeqComposite,1664 refSeqComposite,1693 refSeqComposite,1722 refSeqComposite,1730 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 tRNAs,52 tRNAs,114 tRNAs,139 tRNAs,156 tRNAs,204 tRNAs,216 tRNAs,246 tRNAs,317 tRNAs,321 tRNAs,336 tRNAs,363 transMapEnsemblV5,24 transMapEnsemblV5,34 transMapEnsemblV5,71 transMapEnsemblV5,86 transMapEnsemblV5,98 transMapEnsemblV5,119 transMapEnsemblV5,126 transMapEnsemblV5,161 transMapEnsemblV5,178 transMapEnsemblV5,201 transMapEnsemblV5,208 transMapEnsemblV5,251 transMapEnsemblV5,255 transMapEnsemblV5,259 transMapEnsemblV5,271 transMapEnsemblV5,277 transMapEnsemblV5,294 transMapEnsemblV5,302 transMapEnsemblV5,309 transMapEnsemblV5,311 transMapEnsemblV5,322 transMapEnsemblV5,327 transMapEnsemblV5,331 transMapEnsemblV5,339 transMapEnsemblV5,343 transMapEnsemblV5,345 transMapEnsemblV5,376 transMapEnsemblV5,403 transMapEnsemblV5,413 transMapEnsemblV5,416 transMapEnsemblV5,438 transMapEnsemblV5,447 transMapEnsemblV5,460 transMapEnsemblV5,470 transMapEnsemblV5,482 transMapEnsemblV5,503 transMapEnsemblV5,517 transMapEnsemblV5,528 transMapEnsemblV5,532 transMapEnsemblV5,538 transMapEnsemblV5,577 transMapEnsemblV5,585 transMapEnsemblV5,603 transMapEnsemblV5,619 transMapEnsemblV5,642 transMapEnsemblV5,691 transMapEnsemblV5,703 transMapEnsemblV5,805 transMapEstV5,22 transMapEstV5,32 transMapEstV5,40 transMapEstV5,55 transMapEstV5,67 transMapEstV5,88 transMapEstV5,95 transMapEstV5,130 transMapEstV5,147 transMapEstV5,170 transMapEstV5,177 transMapEstV5,220 transMapEstV5,224 transMapEstV5,228 transMapEstV5,240 transMapEstV5,246 transMapEstV5,263 transMapEstV5,271 transMapEstV5,278 transMapEstV5,280 transMapEstV5,291 transMapEstV5,296 transMapEstV5,300 transMapEstV5,308 transMapEstV5,312 transMapEstV5,314 transMapEstV5,345 transMapEstV5,372 transMapEstV5,382 transMapEstV5,385 transMapEstV5,407 transMapEstV5,416 transMapEstV5,429 transMapEstV5,439 transMapEstV5,451 transMapEstV5,472 transMapEstV5,486 transMapEstV5,497 transMapEstV5,501 transMapEstV5,507 transMapEstV5,546 transMapEstV5,554 transMapEstV5,572 transMapEstV5,588 transMapEstV5,611 transMapEstV5,660 transMapEstV5,672 transMapEstV5,774 transMapRefSeqV5,22 transMapRefSeqV5,32 transMapRefSeqV5,40 transMapRefSeqV5,55 transMapRefSeqV5,67 transMapRefSeqV5,88 transMapRefSeqV5,95 transMapRefSeqV5,130 transMapRefSeqV5,147 transMapRefSeqV5,170 transMapRefSeqV5,177 transMapRefSeqV5,220 transMapRefSeqV5,224 transMapRefSeqV5,228 transMapRefSeqV5,240 transMapRefSeqV5,246 transMapRefSeqV5,263 transMapRefSeqV5,271 transMapRefSeqV5,278 transMapRefSeqV5,280 transMapRefSeqV5,291 transMapRefSeqV5,296 transMapRefSeqV5,300 transMapRefSeqV5,308 transMapRefSeqV5,312 transMapRefSeqV5,314 transMapRefSeqV5,345 transMapRefSeqV5,372 transMapRefSeqV5,382 transMapRefSeqV5,385 transMapRefSeqV5,407 transMapRefSeqV5,416 transMapRefSeqV5,429 transMapRefSeqV5,439 transMapRefSeqV5,451 transMapRefSeqV5,472 transMapRefSeqV5,486 transMapRefSeqV5,497 transMapRefSeqV5,501 transMapRefSeqV5,507 transMapRefSeqV5,546 transMapRefSeqV5,554 transMapRefSeqV5,572 transMapRefSeqV5,588 transMapRefSeqV5,611 transMapRefSeqV5,660 transMapRefSeqV5,672 transMapRefSeqV5,774 transMapRnaV5,22 transMapRnaV5,32 transMapRnaV5,40 transMapRnaV5,55 transMapRnaV5,67 transMapRnaV5,88 transMapRnaV5,95 transMapRnaV5,130 transMapRnaV5,147 transMapRnaV5,170 transMapRnaV5,177 transMapRnaV5,220 transMapRnaV5,224 transMapRnaV5,228 transMapRnaV5,240 transMapRnaV5,246 transMapRnaV5,263 transMapRnaV5,271 transMapRnaV5,278 transMapRnaV5,280 transMapRnaV5,291 transMapRnaV5,296 transMapRnaV5,300 transMapRnaV5,308 transMapRnaV5,312 transMapRnaV5,314 transMapRnaV5,345 transMapRnaV5,372 transMapRnaV5,382 transMapRnaV5,385 transMapRnaV5,407 transMapRnaV5,416 transMapRnaV5,429 transMapRnaV5,439 transMapRnaV5,451 transMapRnaV5,472 transMapRnaV5,486 transMapRnaV5,497 transMapRnaV5,501 transMapRnaV5,507 transMapRnaV5,546 transMapRnaV5,554 transMapRnaV5,572 transMapRnaV5,588 transMapRnaV5,611 transMapRnaV5,660 transMapRnaV5,672 transMapRnaV5,774 transMapV5,21 transMapV5,31 transMapV5,39 transMapV5,56 transMapV5,91 transMapV5,98 transMapV5,103 transMapV5,121 transMapV5,126 transMapV5,132 transMapV5,136 transMapV5,173 transMapV5,194 transMapV5,201 transMapV5,236 transMapV5,253 transMapV5,276 transMapV5,283 transMapV5,326 transMapV5,330 transMapV5,334 transMapV5,346 transMapV5,352 transMapV5,369 transMapV5,377 transMapV5,384 transMapV5,386 transMapV5,397 transMapV5,402 transMapV5,406 transMapV5,414 transMapV5,418 transMapV5,420 transMapV5,451 transMapV5,478 transMapV5,488 transMapV5,491 transMapV5,513 transMapV5,522 transMapV5,535 transMapV5,545 transMapV5,557 transMapV5,578 transMapV5,592 transMapV5,603 transMapV5,607 transMapV5,613 transMapV5,652 transMapV5,660 transMapV5,678 transMapV5,694 transMapV5,717 transMapV5,766 transMapV5,778 transMapV5,880 ucscToINSDC,26 ucscToINSDC,33 ucscToINSDC,38 ucscToINSDC,43 uniprot,22 uniprot,40 uniprot,53 uniprot,69 uniprot,81 uniprot,87 uniprot,94 uniprot,102 uniprot,119 uniprot,184 uniprot,202 uniprot,215 uniprot,233 uniprot,259 uniprot,270 uniprot,281 uniprot,308 uniprot,379 uniprot,410 uniprot,421 uniprot,428 uniprot,444 uniprot,463 uniprot,485 uniprot,493 uniprot,510 uniprot,527 uniprot,534 uniprot,539 uniprot,543 uniprot,547 uniprot,562 uniprot,571 uniprot,607 uniprot,640 uniprot,649 uniprot,668 uniprot,698 uniprot,748 uniprot,785 uniprot,789 uniprot,791 uniprot,797 uniprot,802 uniprot,810 uniprot,812 uniprot,819 uniprot,832 uniprot,836 uniprot,855 uniprot,873 uniprot,883 uniprot,903 uniprot,913 uniprot,923 uniprot,927 uniprot,935 uniprot,944 uniprot,947 uniprot,953 uniprot,961 uniprot,969 uniprot,1009 uniprot,1036 uniprot,1039 uniprot,1054 uniprot,1090 uniprot,1112 uniprot,1126 uniprot,1136 uniprot,1140 uniprot,1156 uniprot,1172 uniprot,1212 uniprot,1221 uniprot,1243 uniprot,1253 uniprot,1267 uniprot,1273 uniprot,1278 uniprot,1294 uniprot,1303 uniprot,1307 uniprot,1321 uniprot,1332 uniprot,1339 uniprot,1358 uniprot,1372 uniprot,1376 uniprot,1384 uniprot,1388 uniprot,1409 uniprot,1414 uniprot,1428 uniprot,1431 uniprot,1462 uniprot,1508 uniprot,1512 uniprot,1519 uniprot,1522 uniprot,1527 uniprot,1535 uniprot,1547 uniprot,1574 uniprot,1582 uniprot,1588 uniprot,1592 uniprot,1595 uniprot,1606 uniprot,1609 uniprot,1612 uniprot,1618 uniprot,1621 uniprot,1628 uniprot,1640 uniprot,1664 uniprot,1667 uniprot,1678 uniprot,1681 uniprot,1701 uniprot,1707 uniprot,1711 uniprot,1719 uniprot,1723 uniprot,1729 uniprot,1743 uniprot,1746 uniprot,1753 uniprot,1773 uniprot,1796 uniprot,1857 uniprot,1861 uniprot,1893 uniprot,1963 uniprot,1988 uniprot,1992 uniprot,2024 uniprot,2029 xenoMrna,36 xenoMrna,47 xenoMrna,59 xenoMrna,69 xenoMrna,72 xenoMrna,75 xenoMrna,82 xenoMrna,90 xenoMrna,94 xenoMrna,97 xenoMrna,103 xenoMrna,121 xenoMrna,126 xenoMrna,129 xenoMrna,144 xenoMrna,148 xenoMrna,158 xenoMrna,170 xenoMrna,180 xenoMrna,185 xenoMrna,195 xenoMrna,200 xenoMrna,207 xenoMrna,218 xenoMrna,221 xenoMrna,224 xenoMrna,229 xenoMrna,239 xenoMrna,242 xenoMrna,248 xenoMrna,258 xenoMrna,265 xenoMrna,274 xenoMrna,295 xenoMrna,305 xenoMrna,337 xenoMrna,344 xenoMrna,358 xenoMrna,367 xenoMrna,375 xenoMrna,384 xenoMrna,393 xenoMrna,410 xenoMrna,417 xenoMrna,428 xenoMrna,451 xenoMrna,459 xenoMrna,464 xenoMrna,478 xenoMrna,481 xenoMrna,498 xenoMrna,507 xenoMrna,513 xenoMrna,526 xenoMrna,592 xenoRefGene,26 xenoRefGene,33 xenoRefGene,48 xenoRefGene,55 xenoRefGene,59 xenoRefGene,63 xenoRefGene,74 xenoRefGene,89 xenoRefGene,92 xenoRefGene,95 xenoRefGene,109 xenoRefGene,115 xenoRefGene,120 xenoRefGene,125 xenoRefGene,133 xenoRefGene,161 xenoRefGene,166 xenoRefGene,181 xenoRefGene,196 xenoRefGene,209 xenoRefGene,216 xenoRefGene,221 xenoRefGene,244 xenoRefGene,247 xenoRefGene,263 xenoRefGene,272 xenoRefGene,295 their nestedRepeats,190 uniprot,62 uniprot,723 uniprot,1101 them chainCavPor3,806 chainHg19,797 chainMm10,797 chainMm39,797 chainMonDom5,797 chainNetCavPor3,809 chainNetHg19,799 chainNetMm10,799 chainNetMm39,800 chainNetMonDom5,800 chainNetRn6,803 chainRn6,800 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netCavPor3,806 netHg19,797 netMm10,797 netMm39,797 netMonDom5,797 netRn6,800 rmsk,318 tRNAs,280 uniprot,20 uniprot,173 uniprot,483 then chainCavPor3,656 chainCavPor3,795 chainCavPor3,880 chainHg19,647 chainHg19,786 chainHg19,871 chainMm10,647 chainMm10,786 chainMm10,871 chainMm39,647 chainMm39,786 chainMm39,871 chainMonDom5,647 chainMonDom5,786 chainMonDom5,871 chainNetCavPor3,659 chainNetCavPor3,798 chainNetCavPor3,883 chainNetHg19,649 chainNetHg19,788 chainNetHg19,873 chainNetMm10,649 chainNetMm10,788 chainNetMm10,873 chainNetMm39,650 chainNetMm39,789 chainNetMm39,874 chainNetMonDom5,650 chainNetMonDom5,789 chainNetMonDom5,874 chainNetRn6,653 chainNetRn6,792 chainNetRn6,877 chainRn6,650 chainRn6,789 chainRn6,874 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netCavPor3,656 netCavPor3,795 netCavPor3,880 netHg19,647 netHg19,786 netHg19,871 netMm10,647 netMm10,786 netMm10,871 netMm39,647 netMm39,786 netMm39,871 netMonDom5,647 netMonDom5,786 netMonDom5,871 netRn6,650 netRn6,789 netRn6,874 tRNAs,54 transMapV5,129 uniprot,1083 uniprot,1516 there HLTOGAannotvHg38v1,237 HLTOGAannotvHg38v1,280 cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 ctgPos2,33 est,619 intronEst,700 transMapEnsemblV5,450 transMapEstV5,419 transMapRefSeqV5,419 transMapRnaV5,419 transMapV5,525 uniprot,705 uniprot,1092 xenoMrna,115 therefore gold,112 refSeqComposite,1630 uniprot,968 uniprot,1145 these HLTOGAannotvHg38v1,158 HLTOGAannotvHg38v1,187 HLTOGAannotvHg38v1,261 augustusGene,95 augustusGene,190 chainCavPor3,54 chainCavPor3,104 chainCavPor3,414 chainCavPor3,668 chainHg19,52 chainHg19,100 chainHg19,407 chainHg19,659 chainMm10,52 chainMm10,100 chainMm10,407 chainMm10,659 chainMm39,52 chainMm39,100 chainMm39,407 chainMm39,659 chainMonDom5,52 chainMonDom5,100 chainMonDom5,407 chainMonDom5,659 chainNetCavPor3,57 chainNetCavPor3,107 chainNetCavPor3,417 chainNetCavPor3,671 chainNetHg19,54 chainNetHg19,102 chainNetHg19,409 chainNetHg19,661 chainNetMm10,54 chainNetMm10,102 chainNetMm10,409 chainNetMm10,661 chainNetMm39,55 chainNetMm39,103 chainNetMm39,410 chainNetMm39,662 chainNetMonDom5,55 chainNetMonDom5,103 chainNetMonDom5,410 chainNetMonDom5,662 chainNetRn6,56 chainNetRn6,105 chainNetRn6,413 chainNetRn6,665 chainRn6,53 chainRn6,102 chainRn6,410 chainRn6,662 ensGene,10 ensGene,154 est,587 gap,83 gap,147 geneid,152 intronEst,668 microsat,24 nestedRepeats,262 nestedRepeats,266 netCavPor3,54 netCavPor3,104 netCavPor3,414 netCavPor3,668 netHg19,52 netHg19,100 netHg19,407 netHg19,659 netMm10,52 netMm10,100 netMm10,407 netMm10,659 netMm39,52 netMm39,100 netMm39,407 netMm39,659 netMonDom5,52 netMonDom5,100 netMonDom5,407 netMonDom5,659 netRn6,53 netRn6,102 netRn6,410 netRn6,662 refSeqComposite,321 refSeqComposite,331 refSeqComposite,793 refSeqComposite,1291 refSeqComposite,1427 rmsk,235 simpleRepeat,33 tRNAs,56 tRNAs,223 tRNAs,257 tRNAs,303 tRNAs,359 transMapEnsemblV5,457 transMapEnsemblV5,466 transMapEnsemblV5,521 transMapEnsemblV5,582 transMapEstV5,426 transMapEstV5,435 transMapEstV5,490 transMapEstV5,551 transMapRefSeqV5,426 transMapRefSeqV5,435 transMapRefSeqV5,490 transMapRefSeqV5,551 transMapRnaV5,426 transMapRnaV5,435 transMapRnaV5,490 transMapRnaV5,551 transMapV5,12 transMapV5,532 transMapV5,541 transMapV5,596 transMapV5,657 uniprot,99 uniprot,130 uniprot,1160 thesis chainCavPor3,1026 chainHg19,1017 chainMm10,1017 chainMm39,1017 chainMonDom5,1017 chainNetCavPor3,1029 chainNetHg19,1019 chainNetMm10,1019 chainNetMm39,1020 chainNetMonDom5,1020 chainNetRn6,1023 chainRn6,1020 netCavPor3,1026 netHg19,1017 netMm10,1017 netMm39,1017 netMonDom5,1017 netRn6,1020 they chainCavPor3,331 chainHg19,324 chainMm10,324 chainMm39,324 chainMonDom5,324 chainNetCavPor3,334 chainNetHg19,326 chainNetMm10,326 chainNetMm39,327 chainNetMonDom5,327 chainNetRn6,330 chainRn6,327 netCavPor3,331 netHg19,324 netMm10,324 netMm39,324 netMonDom5,324 netRn6,327 refSeqComposite,247 refSeqComposite,291 refSeqComposite,356 refSeqComposite,418 tRNAs,188 tRNAs,267 uniprot,179 thibaud-nissen refGene,364 refSeqComposite,1751 xenoRefGene,323 thick chainCavPor3,45 chainHg19,43 chainMm10,43 chainMm39,43 chainMonDom5,43 chainNetCavPor3,48 chainNetHg19,45 chainNetMm10,45 chainNetMm39,46 chainNetMonDom5,46 chainNetRn6,47 chainRn6,44 netCavPor3,45 netHg19,43 netMm10,43 netMm39,43 netMonDom5,43 netRn6,44 refSeqComposite,993 refSeqComposite,1009 thin refSeqComposite,991 refSeqComposite,998 this HLTOGAannotvHg38v1,315 augustusGene,13 augustusGene,106 augustusGene,224 blastHg18KG,14 blastHg18KG,189 chainCavPor3,15 chainCavPor3,175 chainCavPor3,302 chainCavPor3,401 chainCavPor3,699 chainCavPor3,821 chainHg19,13 chainHg19,170 chainHg19,295 chainHg19,394 chainHg19,690 chainHg19,812 chainMm10,13 chainMm10,170 chainMm10,295 chainMm10,394 chainMm10,690 chainMm10,812 chainMm39,13 chainMm39,170 chainMm39,295 chainMm39,394 chainMm39,690 chainMm39,812 chainMonDom5,13 chainMonDom5,170 chainMonDom5,295 chainMonDom5,394 chainMonDom5,690 chainMonDom5,812 chainNetCavPor3,18 chainNetCavPor3,178 chainNetCavPor3,305 chainNetCavPor3,404 chainNetCavPor3,702 chainNetCavPor3,824 chainNetHg19,15 chainNetHg19,172 chainNetHg19,297 chainNetHg19,396 chainNetHg19,692 chainNetHg19,814 chainNetMm10,15 chainNetMm10,172 chainNetMm10,297 chainNetMm10,396 chainNetMm10,692 chainNetMm10,814 chainNetMm39,16 chainNetMm39,173 chainNetMm39,298 chainNetMm39,397 chainNetMm39,693 chainNetMm39,815 chainNetMonDom5,16 chainNetMonDom5,173 chainNetMonDom5,298 chainNetMonDom5,397 chainNetMonDom5,693 chainNetMonDom5,815 chainNetRn6,17 chainNetRn6,175 chainNetRn6,300 chainNetRn6,400 chainNetRn6,696 chainNetRn6,818 chainRn6,14 chainRn6,172 chainRn6,297 chainRn6,397 chainRn6,693 chainRn6,815 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ctgPos2,8 ensGene,119 ensGene,135 est,11 est,47 est,112 est,139 est,375 est,412 est,592 est,628 est,641 est,722 gap,8 gap,22 gap,63 gap,95 gc5Base,38 gc5Base,77 geneid,11 genscan,11 genscan,65 genscan,128 gold,9 gold,59 gold,128 intronEst,13 intronEst,131 intronEst,193 intronEst,220 intronEst,456 intronEst,493 intronEst,673 intronEst,709 intronEst,722 intronEst,803 intronEst,806 microsat,11 microsat,50 microsat,99 mrna,28 mrna,58 mrna,85 mrna,321 mrna,349 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netCavPor3,15 netCavPor3,175 netCavPor3,302 netCavPor3,401 netCavPor3,699 netCavPor3,821 netHg19,13 netHg19,170 netHg19,295 netHg19,394 netHg19,690 netHg19,812 netMm10,13 netMm10,170 netMm10,295 netMm10,394 netMm10,690 netMm10,812 netMm39,13 netMm39,170 netMm39,295 netMm39,394 netMm39,690 netMm39,812 netMonDom5,13 netMonDom5,170 netMonDom5,295 netMonDom5,394 netMonDom5,690 netMonDom5,812 netRn6,14 netRn6,172 netRn6,297 netRn6,397 netRn6,693 netRn6,815 quality,53 refGene,39 refGene,85 refGene,123 refGene,178 refGene,217 refGene,253 refGene,318 refSeqComposite,57 refSeqComposite,144 refSeqComposite,497 refSeqComposite,561 refSeqComposite,722 refSeqComposite,812 refSeqComposite,851 refSeqComposite,1385 refSeqComposite,1433 refSeqComposite,1621 refSeqComposite,1707 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 tRNAs,14 tRNAs,134 transMapEnsemblV5,15 transMapEnsemblV5,95 transMapEnsemblV5,105 transMapEnsemblV5,133 transMapEnsemblV5,286 transMapEnsemblV5,674 transMapEstV5,13 transMapEstV5,64 transMapEstV5,74 transMapEstV5,102 transMapEstV5,255 transMapEstV5,643 transMapRefSeqV5,14 transMapRefSeqV5,64 transMapRefSeqV5,74 transMapRefSeqV5,102 transMapRefSeqV5,255 transMapRefSeqV5,643 transMapRnaV5,14 transMapRnaV5,64 transMapRnaV5,74 transMapRnaV5,102 transMapRnaV5,255 transMapRnaV5,643 transMapV5,170 transMapV5,180 transMapV5,208 transMapV5,361 transMapV5,749 ucscToINSDC,14 ucscToINSDC,46 uniprot,12 uniprot,134 uniprot,149 uniprot,218 uniprot,220 uniprot,653 uniprot,663 uniprot,871 uniprot,878 uniprot,1018 uniprot,1058 uniprot,1063 uniprot,1248 uniprot,1259 uniprot,1352 uniprot,1447 uniprot,1530 uniprot,1553 uniprot,1562 uniprot,1657 uniprot,1674 uniprot,1688 uniprot,1939 xenoMrna,11 xenoMrna,33 xenoMrna,63 xenoMrna,133 xenoMrna,160 xenoMrna,396 xenoMrna,424 xenoRefGene,11 xenoRefGene,36 xenoRefGene,45 xenoRefGene,83 xenoRefGene,138 xenoRefGene,177 xenoRefGene,213 xenoRefGene,278 those est,368 est,401 intronEst,449 intronEst,482 microsat,62 mrna,314 nestedRepeats,272 refGene,266 refSeqComposite,218 refSeqComposite,347 refSeqComposite,1234 tRNAs,176 uniprot,729 xenoMrna,389 xenoMrna,488 xenoRefGene,226 thousands chainCavPor3,255 chainHg19,250 chainMm10,250 chainMm39,250 chainMonDom5,250 chainNetCavPor3,258 chainNetHg19,252 chainNetMm10,252 chainNetMm39,253 chainNetMonDom5,253 chainNetRn6,255 chainRn6,252 netCavPor3,255 netHg19,250 netMm10,250 netMm39,250 netMonDom5,250 netRn6,252 three uniprot,1227 three-step uniprot,989 through gap,56 nestedRepeats,97 refGene,128 refSeqComposite,727 refSeqComposite,1320 refSeqComposite,1358 rmsk,309 transMapEnsemblV5,527 transMapEstV5,496 transMapRefSeqV5,496 transMapRnaV5,496 transMapV5,602 uniprot,98 uniprot,133 uniprot,633 uniprot,804 uniprot,1521 xenoRefGene,88 thus HLTOGAannotvHg38v1,279 time chainCavPor3,804 chainHg19,795 chainMm10,795 chainMm39,795 chainMonDom5,795 chainNetCavPor3,807 chainNetHg19,797 chainNetMm10,797 chainNetMm39,798 chainNetMonDom5,798 chainNetRn6,801 chainRn6,798 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netCavPor3,804 netHg19,795 netMm10,795 netMm39,795 netMonDom5,795 netRn6,798 tissue est,204 est,239 est,254 intronEst,285 intronEst,320 intronEst,335 mrna,150 mrna,185 mrna,200 xenoMrna,225 xenoMrna,260 xenoMrna,275 tissues est,247 intronEst,328 mrna,193 xenoMrna,268 tm tRNAs,369 tRNAs,441 to HLTOGAannotvHg38v1,18 HLTOGAannotvHg38v1,90 HLTOGAannotvHg38v1,99 HLTOGAannotvHg38v1,106 HLTOGAannotvHg38v1,208 HLTOGAannotvHg38v1,255 HLTOGAannotvHg38v1,289 augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 blastHg18KG,56 blastHg18KG,187 chainCavPor3,25 chainCavPor3,73 chainCavPor3,147 chainCavPor3,216 chainCavPor3,228 chainCavPor3,322 chainCavPor3,333 chainCavPor3,338 chainCavPor3,350 chainCavPor3,356 chainCavPor3,379 chainCavPor3,460 chainCavPor3,474 chainCavPor3,558 chainCavPor3,661 chainCavPor3,797 chainCavPor3,809 chainCavPor3,849 chainCavPor3,872 chainCavPor3,882 chainHg19,23 chainHg19,70 chainHg19,143 chainHg19,211 chainHg19,223 chainHg19,315 chainHg19,326 chainHg19,331 chainHg19,343 chainHg19,349 chainHg19,372 chainHg19,453 chainHg19,467 chainHg19,551 chainHg19,652 chainHg19,788 chainHg19,800 chainHg19,840 chainHg19,863 chainHg19,873 chainMm10,23 chainMm10,70 chainMm10,143 chainMm10,211 chainMm10,223 chainMm10,315 chainMm10,326 chainMm10,331 chainMm10,343 chainMm10,349 chainMm10,372 chainMm10,453 chainMm10,467 chainMm10,551 chainMm10,652 chainMm10,788 chainMm10,800 chainMm10,840 chainMm10,863 chainMm10,873 chainMm39,23 chainMm39,70 chainMm39,143 chainMm39,211 chainMm39,223 chainMm39,315 chainMm39,326 chainMm39,331 chainMm39,343 chainMm39,349 chainMm39,372 chainMm39,453 chainMm39,467 chainMm39,551 chainMm39,652 chainMm39,788 chainMm39,800 chainMm39,840 chainMm39,863 chainMm39,873 chainMonDom5,23 chainMonDom5,70 chainMonDom5,143 chainMonDom5,211 chainMonDom5,223 chainMonDom5,315 chainMonDom5,326 chainMonDom5,331 chainMonDom5,343 chainMonDom5,349 chainMonDom5,372 chainMonDom5,453 chainMonDom5,467 chainMonDom5,551 chainMonDom5,652 chainMonDom5,788 chainMonDom5,800 chainMonDom5,840 chainMonDom5,863 chainMonDom5,873 chainNetCavPor3,28 chainNetCavPor3,76 chainNetCavPor3,150 chainNetCavPor3,219 chainNetCavPor3,231 chainNetCavPor3,325 chainNetCavPor3,336 chainNetCavPor3,341 chainNetCavPor3,353 chainNetCavPor3,359 chainNetCavPor3,382 chainNetCavPor3,463 chainNetCavPor3,477 chainNetCavPor3,561 chainNetCavPor3,664 chainNetCavPor3,800 chainNetCavPor3,812 chainNetCavPor3,852 chainNetCavPor3,875 chainNetCavPor3,885 chainNetHg19,25 chainNetHg19,72 chainNetHg19,145 chainNetHg19,213 chainNetHg19,225 chainNetHg19,317 chainNetHg19,328 chainNetHg19,333 chainNetHg19,345 chainNetHg19,351 chainNetHg19,374 chainNetHg19,455 chainNetHg19,469 chainNetHg19,553 chainNetHg19,654 chainNetHg19,790 chainNetHg19,802 chainNetHg19,842 chainNetHg19,865 chainNetHg19,875 chainNetMm10,25 chainNetMm10,72 chainNetMm10,145 chainNetMm10,213 chainNetMm10,225 chainNetMm10,317 chainNetMm10,328 chainNetMm10,333 chainNetMm10,345 chainNetMm10,351 chainNetMm10,374 chainNetMm10,455 chainNetMm10,469 chainNetMm10,553 chainNetMm10,654 chainNetMm10,790 chainNetMm10,802 chainNetMm10,842 chainNetMm10,865 chainNetMm10,875 chainNetMm39,26 chainNetMm39,73 chainNetMm39,146 chainNetMm39,214 chainNetMm39,226 chainNetMm39,318 chainNetMm39,329 chainNetMm39,334 chainNetMm39,346 chainNetMm39,352 chainNetMm39,375 chainNetMm39,456 chainNetMm39,470 chainNetMm39,554 chainNetMm39,655 chainNetMm39,791 chainNetMm39,803 chainNetMm39,843 chainNetMm39,866 chainNetMm39,876 chainNetMonDom5,26 chainNetMonDom5,73 chainNetMonDom5,146 chainNetMonDom5,214 chainNetMonDom5,226 chainNetMonDom5,318 chainNetMonDom5,329 chainNetMonDom5,334 chainNetMonDom5,346 chainNetMonDom5,352 chainNetMonDom5,375 chainNetMonDom5,456 chainNetMonDom5,470 chainNetMonDom5,554 chainNetMonDom5,655 chainNetMonDom5,791 chainNetMonDom5,803 chainNetMonDom5,843 chainNetMonDom5,866 chainNetMonDom5,876 chainNetRn6,27 chainNetRn6,75 chainNetRn6,148 chainNetRn6,216 chainNetRn6,228 chainNetRn6,321 chainNetRn6,332 chainNetRn6,337 chainNetRn6,349 chainNetRn6,355 chainNetRn6,378 chainNetRn6,459 chainNetRn6,473 chainNetRn6,557 chainNetRn6,658 chainNetRn6,794 chainNetRn6,806 chainNetRn6,846 chainNetRn6,869 chainNetRn6,879 chainRn6,24 chainRn6,72 chainRn6,145 chainRn6,213 chainRn6,225 chainRn6,318 chainRn6,329 chainRn6,334 chainRn6,346 chainRn6,352 chainRn6,375 chainRn6,456 chainRn6,470 chainRn6,554 chainRn6,655 chainRn6,791 chainRn6,803 chainRn6,843 chainRn6,866 chainRn6,876 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 ctgPos2,30 ensGene,43 ensGene,149 est,94 est,121 est,158 est,162 est,177 est,184 est,188 est,206 est,226 est,233 est,332 est,381 est,391 est,415 est,436 est,445 est,514 est,579 est,639 est,733 gc5Base,48 geneid,54 geneid,144 geneid,164 genscan,95 genscan,105 genscan,114 genscan,145 genscan,171 gold,121 intronEst,55 intronEst,175 intronEst,202 intronEst,239 intronEst,243 intronEst,258 intronEst,265 intronEst,269 intronEst,287 intronEst,307 intronEst,314 intronEst,413 intronEst,462 intronEst,472 intronEst,496 intronEst,517 intronEst,526 intronEst,595 intronEst,660 intronEst,720 intronEst,817 microsat,18 microsat,38 microsat,121 mrna,67 mrna,104 mrna,108 mrna,123 mrna,130 mrna,134 mrna,152 mrna,172 mrna,179 mrna,278 mrna,327 mrna,337 mrna,352 mrna,375 mrna,450 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netCavPor3,25 netCavPor3,73 netCavPor3,147 netCavPor3,216 netCavPor3,228 netCavPor3,322 netCavPor3,333 netCavPor3,338 netCavPor3,350 netCavPor3,356 netCavPor3,379 netCavPor3,460 netCavPor3,474 netCavPor3,558 netCavPor3,661 netCavPor3,797 netCavPor3,809 netCavPor3,849 netCavPor3,872 netCavPor3,882 netHg19,23 netHg19,70 netHg19,143 netHg19,211 netHg19,223 netHg19,315 netHg19,326 netHg19,331 netHg19,343 netHg19,349 netHg19,372 netHg19,453 netHg19,467 netHg19,551 netHg19,652 netHg19,788 netHg19,800 netHg19,840 netHg19,863 netHg19,873 netMm10,23 netMm10,70 netMm10,143 netMm10,211 netMm10,223 netMm10,315 netMm10,326 netMm10,331 netMm10,343 netMm10,349 netMm10,372 netMm10,453 netMm10,467 netMm10,551 netMm10,652 netMm10,788 netMm10,800 netMm10,840 netMm10,863 netMm10,873 netMm39,23 netMm39,70 netMm39,143 netMm39,211 netMm39,223 netMm39,315 netMm39,326 netMm39,331 netMm39,343 netMm39,349 netMm39,372 netMm39,453 netMm39,467 netMm39,551 netMm39,652 netMm39,788 netMm39,800 netMm39,840 netMm39,863 netMm39,873 netMonDom5,23 netMonDom5,70 netMonDom5,143 netMonDom5,211 netMonDom5,223 netMonDom5,315 netMonDom5,326 netMonDom5,331 netMonDom5,343 netMonDom5,349 netMonDom5,372 netMonDom5,453 netMonDom5,467 netMonDom5,551 netMonDom5,652 netMonDom5,788 netMonDom5,800 netMonDom5,840 netMonDom5,863 netMonDom5,873 netRn6,24 netRn6,72 netRn6,145 netRn6,213 netRn6,225 netRn6,318 netRn6,329 netRn6,334 netRn6,346 netRn6,352 netRn6,375 netRn6,456 netRn6,470 netRn6,554 netRn6,655 netRn6,791 netRn6,803 netRn6,843 netRn6,866 netRn6,876 quality,43 quality,63 refGene,55 refGene,153 refGene,189 refGene,196 refGene,220 refGene,246 refSeqComposite,54 refSeqComposite,114 refSeqComposite,155 refSeqComposite,167 refSeqComposite,173 refSeqComposite,305 refSeqComposite,308 refSeqComposite,323 refSeqComposite,367 refSeqComposite,439 refSeqComposite,493 refSeqComposite,675 refSeqComposite,700 refSeqComposite,739 refSeqComposite,752 refSeqComposite,774 refSeqComposite,823 refSeqComposite,830 refSeqComposite,854 refSeqComposite,901 refSeqComposite,907 refSeqComposite,915 refSeqComposite,921 refSeqComposite,934 refSeqComposite,976 refSeqComposite,1025 refSeqComposite,1058 refSeqComposite,1094 refSeqComposite,1105 refSeqComposite,1171 refSeqComposite,1437 refSeqComposite,1531 refSeqComposite,1584 refSeqComposite,1683 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 tRNAs,44 tRNAs,66 tRNAs,127 tRNAs,170 tRNAs,219 tRNAs,251 transMapEnsemblV5,111 transMapEnsemblV5,121 transMapEnsemblV5,177 transMapEnsemblV5,200 transMapEnsemblV5,258 transMapEnsemblV5,291 transMapEnsemblV5,299 transMapEnsemblV5,316 transMapEnsemblV5,330 transMapEnsemblV5,342 transMapEnsemblV5,381 transMapEnsemblV5,426 transMapEnsemblV5,436 transMapEnsemblV5,469 transMapEnsemblV5,475 transMapEnsemblV5,488 transMapEnsemblV5,648 transMapEnsemblV5,690 transMapEnsemblV5,769 transMapEstV5,80 transMapEstV5,90 transMapEstV5,146 transMapEstV5,169 transMapEstV5,227 transMapEstV5,260 transMapEstV5,268 transMapEstV5,285 transMapEstV5,299 transMapEstV5,311 transMapEstV5,350 transMapEstV5,395 transMapEstV5,405 transMapEstV5,438 transMapEstV5,444 transMapEstV5,457 transMapEstV5,617 transMapEstV5,659 transMapEstV5,738 transMapRefSeqV5,80 transMapRefSeqV5,90 transMapRefSeqV5,146 transMapRefSeqV5,169 transMapRefSeqV5,227 transMapRefSeqV5,260 transMapRefSeqV5,268 transMapRefSeqV5,285 transMapRefSeqV5,299 transMapRefSeqV5,311 transMapRefSeqV5,350 transMapRefSeqV5,395 transMapRefSeqV5,405 transMapRefSeqV5,438 transMapRefSeqV5,444 transMapRefSeqV5,457 transMapRefSeqV5,617 transMapRefSeqV5,659 transMapRefSeqV5,738 transMapRnaV5,80 transMapRnaV5,90 transMapRnaV5,146 transMapRnaV5,169 transMapRnaV5,227 transMapRnaV5,260 transMapRnaV5,268 transMapRnaV5,285 transMapRnaV5,299 transMapRnaV5,311 transMapRnaV5,350 transMapRnaV5,395 transMapRnaV5,405 transMapRnaV5,438 transMapRnaV5,444 transMapRnaV5,457 transMapRnaV5,617 transMapRnaV5,659 transMapRnaV5,738 transMapV5,79 transMapV5,89 transMapV5,120 transMapV5,131 transMapV5,154 transMapV5,186 transMapV5,196 transMapV5,252 transMapV5,275 transMapV5,333 transMapV5,366 transMapV5,374 transMapV5,391 transMapV5,405 transMapV5,417 transMapV5,456 transMapV5,501 transMapV5,511 transMapV5,544 transMapV5,550 transMapV5,563 transMapV5,723 transMapV5,765 transMapV5,844 ucscToINSDC,22 unipAliSwissprot,8 unipAliTrembl,8 uniprot,27 uniprot,86 uniprot,101 uniprot,118 uniprot,201 uniprot,214 uniprot,226 uniprot,245 uniprot,492 uniprot,525 uniprot,552 uniprot,559 uniprot,658 uniprot,682 uniprot,764 uniprot,784 uniprot,801 uniprot,849 uniprot,917 uniprot,920 uniprot,955 uniprot,974 uniprot,1008 uniprot,1088 uniprot,1196 uniprot,1215 uniprot,1220 uniprot,1247 uniprot,1285 uniprot,1336 uniprot,1356 uniprot,1369 uniprot,1405 uniprot,1413 uniprot,1460 uniprot,1473 uniprot,1478 uniprot,1493 uniprot,1518 uniprot,1551 uniprot,1676 uniprot,1761 uniprot,1802 uniprot,1828 uniprot,1846 uniprot,1851 uniprot,1856 uniprot,1884 uniprot,1890 uniprot,1975 xenoMrna,87 xenoMrna,142 xenoMrna,179 xenoMrna,183 xenoMrna,198 xenoMrna,205 xenoMrna,209 xenoMrna,227 xenoMrna,247 xenoMrna,254 xenoMrna,353 xenoMrna,402 xenoMrna,412 xenoMrna,427 xenoMrna,450 xenoMrna,525 xenoRefGene,113 xenoRefGene,149 xenoRefGene,156 xenoRefGene,180 xenoRefGene,206 toga HLTOGAannotvHg38v1,1 HLTOGAannotvHg38v1,4 HLTOGAannotvHg38v1,16 HLTOGAannotvHg38v1,44 HLTOGAannotvHg38v1,72 HLTOGAannotvHg38v1,326 HLTOGAannotvHg38v1,333 together blastHg18KG,87 chainCavPor3,127 chainHg19,123 chainMm10,123 chainMm39,123 chainMonDom5,123 chainNetCavPor3,130 chainNetHg19,125 chainNetMm10,125 chainNetMm39,126 chainNetMonDom5,126 chainNetRn6,128 chainRn6,125 netCavPor3,127 netHg19,123 netMm10,123 netMm39,123 netMonDom5,123 netRn6,125 tolerate chainCavPor3,95 chainHg19,92 chainMm10,92 chainMm39,92 chainMonDom5,92 chainNetCavPor3,98 chainNetHg19,94 chainNetMm10,94 chainNetMm39,95 chainNetMonDom5,95 chainNetRn6,97 chainRn6,94 netCavPor3,95 netHg19,92 netMm10,92 netMm39,92 netMonDom5,92 netRn6,94 tolerated uniprot,1257 too refSeqComposite,932 tool HLTOGAannotvHg38v1,17 blastHg18KG,145 blastHg18KG,167 est,803 intronEst,887 mrna,520 refGene,346 refSeqComposite,1504 refSeqComposite,1733 transMapEnsemblV5,612 transMapEnsemblV5,643 transMapEstV5,581 transMapEstV5,612 transMapRefSeqV5,581 transMapRefSeqV5,612 transMapRnaV5,581 transMapRnaV5,612 transMapV5,687 transMapV5,718 uniprot,1766 uniprot,1797 xenoMrna,595 xenoRefGene,305 tools nestedRepeats,314 rmsk,337 uniprot,1873 top chainCavPor3,515 chainHg19,508 chainMm10,508 chainMm39,508 chainMonDom5,508 chainNetCavPor3,518 chainNetHg19,510 chainNetMm10,510 chainNetMm39,511 chainNetMonDom5,511 chainNetRn6,514 chainRn6,511 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netCavPor3,515 netHg19,508 netMm10,508 netMm39,508 netMonDom5,508 netRn6,511 refGene,133 refSeqComposite,733 uniprot,1304 uniprot,1340 uniprot,1489 xenoRefGene,93 top-level chainCavPor3,390 chainCavPor3,410 chainHg19,383 chainHg19,403 chainMm10,383 chainMm10,403 chainMm39,383 chainMm39,403 chainMonDom5,383 chainMonDom5,403 chainNetCavPor3,393 chainNetCavPor3,413 chainNetHg19,385 chainNetHg19,405 chainNetMm10,385 chainNetMm10,405 chainNetMm39,386 chainNetMm39,406 chainNetMonDom5,386 chainNetMonDom5,406 chainNetRn6,389 chainNetRn6,409 chainRn6,386 chainRn6,406 netCavPor3,390 netCavPor3,410 netHg19,383 netHg19,403 netMm10,383 netMm10,403 netMm39,383 netMm39,403 netMonDom5,383 netMonDom5,403 netRn6,386 netRn6,406 top-scoring uniprot,792 topological uniprot,330 total ctgPos2,40 track augustusGene,14 augustusGene,107 blastHg18KG,15 blastHg18KG,34 blastHg18KG,45 blastHg18KG,190 chainCavPor3,16 chainCavPor3,60 chainCavPor3,63 chainCavPor3,123 chainCavPor3,264 chainCavPor3,267 chainCavPor3,317 chainCavPor3,352 chainCavPor3,384 chainCavPor3,571 chainCavPor3,700 chainCavPor3,763 chainHg19,14 chainHg19,58 chainHg19,61 chainHg19,119 chainHg19,259 chainHg19,262 chainHg19,310 chainHg19,345 chainHg19,377 chainHg19,564 chainHg19,691 chainHg19,754 chainMm10,14 chainMm10,58 chainMm10,61 chainMm10,119 chainMm10,259 chainMm10,262 chainMm10,310 chainMm10,345 chainMm10,377 chainMm10,564 chainMm10,691 chainMm10,754 chainMm39,14 chainMm39,58 chainMm39,61 chainMm39,119 chainMm39,259 chainMm39,262 chainMm39,310 chainMm39,345 chainMm39,377 chainMm39,564 chainMm39,691 chainMm39,754 chainMonDom5,14 chainMonDom5,58 chainMonDom5,61 chainMonDom5,119 chainMonDom5,259 chainMonDom5,262 chainMonDom5,310 chainMonDom5,345 chainMonDom5,377 chainMonDom5,564 chainMonDom5,691 chainMonDom5,754 chainNetCavPor3,19 chainNetCavPor3,63 chainNetCavPor3,66 chainNetCavPor3,126 chainNetCavPor3,267 chainNetCavPor3,270 chainNetCavPor3,320 chainNetCavPor3,355 chainNetCavPor3,387 chainNetCavPor3,574 chainNetCavPor3,703 chainNetCavPor3,766 chainNetHg19,16 chainNetHg19,60 chainNetHg19,63 chainNetHg19,121 chainNetHg19,261 chainNetHg19,264 chainNetHg19,312 chainNetHg19,347 chainNetHg19,379 chainNetHg19,566 chainNetHg19,693 chainNetHg19,756 chainNetMm10,16 chainNetMm10,60 chainNetMm10,63 chainNetMm10,121 chainNetMm10,261 chainNetMm10,264 chainNetMm10,312 chainNetMm10,347 chainNetMm10,379 chainNetMm10,566 chainNetMm10,693 chainNetMm10,756 chainNetMm39,17 chainNetMm39,61 chainNetMm39,64 chainNetMm39,122 chainNetMm39,262 chainNetMm39,265 chainNetMm39,313 chainNetMm39,348 chainNetMm39,380 chainNetMm39,567 chainNetMm39,694 chainNetMm39,757 chainNetMonDom5,17 chainNetMonDom5,61 chainNetMonDom5,64 chainNetMonDom5,122 chainNetMonDom5,262 chainNetMonDom5,265 chainNetMonDom5,313 chainNetMonDom5,348 chainNetMonDom5,380 chainNetMonDom5,567 chainNetMonDom5,694 chainNetMonDom5,757 chainNetRn6,18 chainNetRn6,62 chainNetRn6,65 chainNetRn6,124 chainNetRn6,264 chainNetRn6,267 chainNetRn6,316 chainNetRn6,351 chainNetRn6,383 chainNetRn6,570 chainNetRn6,697 chainNetRn6,760 chainRn6,15 chainRn6,59 chainRn6,62 chainRn6,121 chainRn6,261 chainRn6,264 chainRn6,313 chainRn6,348 chainRn6,380 chainRn6,567 chainRn6,694 chainRn6,757 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ctgPos2,9 ensGene,136 est,12 est,48 est,113 est,138 est,150 est,376 est,642 est,723 gap,9 gap,23 gc5Base,15 gc5Base,39 geneid,12 genscan,12 genscan,66 genscan,76 genscan,87 gold,10 gold,60 gold,129 intronEst,14 intronEst,126 intronEst,132 intronEst,194 intronEst,219 intronEst,231 intronEst,457 intronEst,723 intronEst,804 intronEst,807 microsat,12 microsat,51 microsat,59 microsat,87 mrna,13 mrna,29 mrna,59 mrna,84 mrna,96 mrna,322 mrna,440 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netCavPor3,16 netCavPor3,60 netCavPor3,63 netCavPor3,123 netCavPor3,264 netCavPor3,267 netCavPor3,317 netCavPor3,352 netCavPor3,384 netCavPor3,571 netCavPor3,700 netCavPor3,763 netHg19,14 netHg19,58 netHg19,61 netHg19,119 netHg19,259 netHg19,262 netHg19,310 netHg19,345 netHg19,377 netHg19,564 netHg19,691 netHg19,754 netMm10,14 netMm10,58 netMm10,61 netMm10,119 netMm10,259 netMm10,262 netMm10,310 netMm10,345 netMm10,377 netMm10,564 netMm10,691 netMm10,754 netMm39,14 netMm39,58 netMm39,61 netMm39,119 netMm39,259 netMm39,262 netMm39,310 netMm39,345 netMm39,377 netMm39,564 netMm39,691 netMm39,754 netMonDom5,14 netMonDom5,58 netMonDom5,61 netMonDom5,119 netMonDom5,259 netMonDom5,262 netMonDom5,310 netMonDom5,345 netMonDom5,377 netMonDom5,564 netMonDom5,691 netMonDom5,754 netRn6,15 netRn6,59 netRn6,62 netRn6,121 netRn6,261 netRn6,264 netRn6,313 netRn6,348 netRn6,380 netRn6,567 netRn6,694 netRn6,757 quality,14 quality,33 quality,54 refGene,19 refGene,40 refGene,86 refGene,124 refGene,136 refGene,179 refGene,208 refGene,319 refSeqComposite,17 refSeqComposite,45 refSeqComposite,145 refSeqComposite,149 refSeqComposite,311 refSeqComposite,315 refSeqComposite,328 refSeqComposite,335 refSeqComposite,470 refSeqComposite,498 refSeqComposite,508 refSeqComposite,562 refSeqComposite,723 refSeqComposite,736 refSeqComposite,754 refSeqComposite,813 refSeqComposite,842 refSeqComposite,867 refSeqComposite,1197 refSeqComposite,1212 refSeqComposite,1336 refSeqComposite,1708 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 tRNAs,15 transMapEnsemblV5,16 transMapEnsemblV5,96 transMapEnsemblV5,106 transMapEnsemblV5,231 transMapEnsemblV5,569 transMapEnsemblV5,573 transMapEnsemblV5,675 transMapEstV5,14 transMapEstV5,65 transMapEstV5,75 transMapEstV5,200 transMapEstV5,538 transMapEstV5,542 transMapEstV5,644 transMapRefSeqV5,15 transMapRefSeqV5,65 transMapRefSeqV5,75 transMapRefSeqV5,200 transMapRefSeqV5,538 transMapRefSeqV5,542 transMapRefSeqV5,644 transMapRnaV5,15 transMapRnaV5,65 transMapRnaV5,75 transMapRnaV5,200 transMapRnaV5,538 transMapRnaV5,542 transMapRnaV5,644 transMapV5,101 transMapV5,171 transMapV5,181 transMapV5,306 transMapV5,644 transMapV5,648 transMapV5,750 ucscToINSDC,15 ucscToINSDC,47 uniprot,13 uniprot,104 uniprot,150 uniprot,219 uniprot,221 uniprot,234 uniprot,422 uniprot,429 uniprot,576 uniprot,654 uniprot,710 uniprot,1004 uniprot,1208 uniprot,1277 uniprot,1554 uniprot,1563 uniprot,1583 uniprot,1658 uniprot,1671 uniprot,1689 uniprot,1713 uniprot,1754 uniprot,1940 xenoMrna,12 xenoMrna,34 xenoMrna,64 xenoMrna,134 xenoMrna,159 xenoMrna,171 xenoMrna,397 xenoMrna,515 xenoRefGene,12 xenoRefGene,37 xenoRefGene,46 xenoRefGene,84 xenoRefGene,96 xenoRefGene,139 xenoRefGene,168 xenoRefGene,279 tracks augustusGene,41 chainCavPor3,777 chainHg19,768 chainMm10,768 chainMm39,768 chainMonDom5,768 chainNetCavPor3,780 chainNetHg19,770 chainNetMm10,770 chainNetMm39,771 chainNetMonDom5,771 chainNetRn6,774 chainRn6,771 ensGene,24 est,56 est,421 genscan,56 genscan,74 intronEst,140 intronEst,502 mrna,37 mrna,360 netCavPor3,777 netHg19,768 netMm10,768 netMm39,768 netMonDom5,768 netRn6,771 refGene,76 refGene,94 refSeqComposite,99 refSeqComposite,135 refSeqComposite,169 refSeqComposite,404 refSeqComposite,454 refSeqComposite,593 refSeqComposite,601 refSeqComposite,1137 refSeqComposite,1147 refSeqComposite,1223 refSeqComposite,1292 refSeqComposite,1371 refSeqComposite,1472 refSeqComposite,1579 refSeqComposite,1672 refSeqComposite,1697 transMapEnsemblV5,104 transMapEnsemblV5,522 transMapEnsemblV5,583 transMapEstV5,73 transMapEstV5,491 transMapEstV5,552 transMapRefSeqV5,73 transMapRefSeqV5,491 transMapRefSeqV5,552 transMapRnaV5,73 transMapRnaV5,491 transMapRnaV5,552 transMapV5,13 transMapV5,179 transMapV5,597 transMapV5,658 uniprot,91 uniprot,123 uniprot,206 uniprot,409 uniprot,1643 xenoMrna,42 xenoMrna,435 xenoRefGene,54 traditional chainCavPor3,87 chainHg19,84 chainMm10,84 chainMm39,84 chainMonDom5,84 chainNetCavPor3,90 chainNetHg19,86 chainNetMm10,86 chainNetMm39,87 chainNetMonDom5,87 chainNetRn6,89 chainRn6,86 netCavPor3,87 netHg19,84 netMm10,84 netMm39,84 netMonDom5,84 netRn6,86 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 transcribed est,41 est,456 intronEst,53 intronEst,537 refSeqComposite,430 transcript HLTOGAannotvHg38v1,118 HLTOGAannotvHg38v1,134 HLTOGAannotvHg38v1,258 HLTOGAannotvHg38v1,286 HLTOGAannotvHg38v1,297 est,551 intronEst,632 refSeqComposite,532 refSeqComposite,882 refSeqComposite,910 refSeqComposite,918 refSeqComposite,989 refSeqComposite,1032 refSeqComposite,1053 refSeqComposite,1118 refSeqComposite,1128 transMapEnsemblV5,153 transMapEnsemblV5,324 transMapEnsemblV5,377 transMapEstV5,122 transMapEstV5,293 transMapEstV5,346 transMapRefSeqV5,122 transMapRefSeqV5,293 transMapRefSeqV5,346 transMapRnaV5,122 transMapRnaV5,293 transMapRnaV5,346 transMapV5,228 transMapV5,399 transMapV5,452 uniprot,837 uniprot,908 uniprot,918 uniprot,945 uniprot,963 uniprot,1003 uniprot,1076 uniprot,1223 uniprot,1237 uniprot,1249 uniprot,1263 uniprot,1268 uniprot,1291 uniprot,1325 uniprot,1596 uniprot,1610 uniprot,1623 transcript-genome uniprot,813 uniprot,1619 transcript-to-genome uniprot,806 transcriptase est,507 intronEst,588 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 est,98 est,490 est,537 est,559 intronEst,179 intronEst,571 intronEst,618 intronEst,640 transcriptional genscan,28 tRNAs,497 transcripts HLTOGAannotvHg38v1,159 HLTOGAannotvHg38v1,188 HLTOGAannotvHg38v1,262 augustusGene,124 ncbiRefSeqGenomicDiff,7 refGene,417 refSeqComposite,255 refSeqComposite,322 refSeqComposite,469 refSeqComposite,520 refSeqComposite,553 refSeqComposite,1804 transMapEnsemblV5,341 transMapEstV5,310 transMapRefSeqV5,310 transMapRnaV5,310 transMapV5,416 uniprot,786 uniprot,833 uniprot,928 uniprot,936 uniprot,957 uniprot,985 uniprot,992 uniprot,1011 uniprot,1022 uniprot,1032 uniprot,1056 uniprot,1069 uniprot,1091 uniprot,1096 uniprot,1108 uniprot,1127 uniprot,1168 uniprot,1338 uniprot,1474 xenoRefGene,376 transfer tRNAs,3 tRNAs,374 tRNAs,451 translated transMapV5,155 xenoMrna,14 xenoMrna,79 xenoMrna,99 xenoMrna,468 translation augustusGene,57 tRNAs,159 tRNAs,195 translational genscan,29 transmap transMapEnsemblV5,1 transMapEnsemblV5,3 transMapEnsemblV5,25 transMapEnsemblV5,440 transMapEnsemblV5,499 transMapEnsemblV5,588 transMapEnsemblV5,591 transMapEnsemblV5,594 transMapEnsemblV5,597 transMapEnsemblV5,663 transMapEstV5,1 transMapEstV5,3 transMapEstV5,23 transMapEstV5,409 transMapEstV5,468 transMapEstV5,557 transMapEstV5,560 transMapEstV5,563 transMapEstV5,566 transMapEstV5,632 transMapRefSeqV5,1 transMapRefSeqV5,3 transMapRefSeqV5,23 transMapRefSeqV5,409 transMapRefSeqV5,468 transMapRefSeqV5,557 transMapRefSeqV5,560 transMapRefSeqV5,563 transMapRefSeqV5,566 transMapRefSeqV5,632 transMapRnaV5,1 transMapRnaV5,3 transMapRnaV5,23 transMapRnaV5,409 transMapRnaV5,468 transMapRnaV5,557 transMapRnaV5,560 transMapRnaV5,563 transMapRnaV5,566 transMapRnaV5,632 transMapV5,1 transMapV5,3 transMapV5,22 transMapV5,70 transMapV5,100 transMapV5,157 transMapV5,515 transMapV5,574 transMapV5,663 transMapV5,666 transMapV5,669 transMapV5,672 transMapV5,738 transmembrane unipLocTransMemb,1 unipLocTransMemb,3 uniprot,265 uniprot,273 uniprot,515 uniprot,567 transposable nestedRepeats,379 rmsk,402 transposons chainCavPor3,572 chainCavPor3,597 chainCavPor3,907 chainHg19,565 chainHg19,589 chainHg19,898 chainMm10,565 chainMm10,589 chainMm10,898 chainMm39,565 chainMm39,589 chainMm39,898 chainMonDom5,565 chainMonDom5,589 chainMonDom5,898 chainNetCavPor3,575 chainNetCavPor3,600 chainNetCavPor3,910 chainNetHg19,567 chainNetHg19,591 chainNetHg19,900 chainNetMm10,567 chainNetMm10,591 chainNetMm10,900 chainNetMm39,568 chainNetMm39,592 chainNetMm39,901 chainNetMonDom5,568 chainNetMonDom5,592 chainNetMonDom5,901 chainNetRn6,571 chainNetRn6,595 chainNetRn6,904 chainRn6,568 chainRn6,592 chainRn6,901 netCavPor3,572 netCavPor3,597 netCavPor3,907 netHg19,565 netHg19,589 netHg19,898 netMm10,565 netMm10,589 netMm10,898 netMm39,565 netMm39,589 netMm39,898 netMonDom5,565 netMonDom5,589 netMonDom5,898 netRn6,568 netRn6,592 netRn6,901 treat tRNAs,279 trembl unipAliTrembl,1 unipAliTrembl,6 uniprot,4 uniprot,44 uniprot,79 uniprot,185 uniprot,192 uniprot,199 uniprot,211 uniprot,500 uniprot,604 uniprot,661 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 tried uniprot,869 trimming chainCavPor3,805 chainHg19,796 chainMm10,796 chainMm39,796 chainMonDom5,796 chainNetCavPor3,808 chainNetHg19,798 chainNetMm10,798 chainNetMm39,799 chainNetMonDom5,799 chainNetRn6,802 chainRn6,799 netCavPor3,805 netHg19,796 netMm10,796 netMm39,796 netMonDom5,796 netRn6,799 trna rmsk,190 tRNAs,1 tRNAs,17 tRNAs,50 tRNAs,98 tRNAs,109 tRNAs,132 tRNAs,140 tRNAs,146 tRNAs,173 tRNAs,275 tRNAs,285 tRNAs,313 tRNAs,342 tRNAs,423 tRNAs,484 trna-derived tRNAs,149 tRNAs,301 trnas tRNAs,84 tRNAs,161 tRNAs,196 tRNAs,225 trnascan tRNAs,31 trnascan-se tRNAs,8 tRNAs,22 tRNAs,24 tRNAs,115 tRNAs,330 tRNAs,444 true augustusGene,132 tRNAs,83 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn chainCavPor3,339 chainHg19,332 chainMm10,332 chainMm39,332 chainMonDom5,332 chainNetCavPor3,342 chainNetHg19,334 chainNetMm10,334 chainNetMm39,335 chainNetMonDom5,335 chainNetRn6,338 chainRn6,335 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netCavPor3,339 netHg19,332 netMm10,332 netMm39,332 netMonDom5,332 netRn6,335 refGene,171 refSeqComposite,805 xenoRefGene,131 turns uniprot,370 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two chainCavPor3,913 chainHg19,904 chainMm10,904 chainMm39,904 chainMonDom5,904 chainNetCavPor3,916 chainNetHg19,906 chainNetMm10,906 chainNetMm39,907 chainNetMonDom5,907 chainNetRn6,910 chainRn6,907 netCavPor3,913 netHg19,904 netMm10,904 netMm39,904 netMonDom5,904 netRn6,907 transMapEnsemblV5,452 transMapEnsemblV5,489 transMapEstV5,421 transMapEstV5,458 transMapRefSeqV5,421 transMapRefSeqV5,458 transMapRnaV5,421 transMapRnaV5,458 transMapV5,527 transMapV5,564 uniprot,71 uniprot,630 uniprot,1641 xenoMrna,67 xenoMrna,104 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type est,166 est,196 gold,133 gold,148 intronEst,247 intronEst,277 mrna,112 mrna,142 uniprot,65 uniprot,271 uniprot,464 uniprot,614 xenoMrna,187 xenoMrna,217 types augustusGene,89 chainCavPor3,511 chainHg19,504 chainMm10,504 chainMm39,504 chainMonDom5,504 chainNetCavPor3,514 chainNetHg19,506 chainNetMm10,506 chainNetMm39,507 chainNetMonDom5,507 chainNetRn6,510 chainRn6,507 est,245 est,424 gap,69 intronEst,326 intronEst,505 mrna,191 mrna,363 netCavPor3,511 netHg19,504 netMm10,504 netMm39,504 netMonDom5,504 netRn6,507 refSeqComposite,871 refSeqComposite,886 transMapEnsemblV5,138 transMapEstV5,107 transMapRefSeqV5,107 transMapRnaV5,107 transMapV5,213 uniprot,676 xenoMrna,266 xenoMrna,438 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 refSeqComposite,429 tRNAs,311 typically HLTOGAannotvHg38v1,273 cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 est,30 est,459 gc5Base,33 intronEst,42 intronEst,540 u chainCavPor3,1076 chainHg19,1067 chainMm10,1067 chainMm39,1067 chainMonDom5,1067 chainNetCavPor3,1079 chainNetHg19,1069 chainNetMm10,1069 chainNetMm39,1070 chainNetMonDom5,1070 chainNetRn6,1073 chainRn6,1070 netCavPor3,1076 netHg19,1067 netMm10,1067 netMm39,1067 netMonDom5,1067 netRn6,1070 ucsc blastHg18KG,32 blastHg18KG,43 est,727 intronEst,811 mrna,444 nestedRepeats,245 refGene,1 refGene,3 refGene,323 refSeqComposite,43 refSeqComposite,47 refSeqComposite,70 refSeqComposite,192 refSeqComposite,333 refSeqComposite,477 refSeqComposite,483 refSeqComposite,591 refSeqComposite,1151 refSeqComposite,1201 refSeqComposite,1209 refSeqComposite,1413 refSeqComposite,1598 refSeqComposite,1712 tRNAs,340 transMapEnsemblV5,35 transMapEnsemblV5,162 transMapEnsemblV5,183 transMapEnsemblV5,682 transMapEstV5,33 transMapEstV5,131 transMapEstV5,152 transMapEstV5,651 transMapRefSeqV5,33 transMapRefSeqV5,131 transMapRefSeqV5,152 transMapRefSeqV5,651 transMapRnaV5,33 transMapRnaV5,131 transMapRnaV5,152 transMapRnaV5,651 transMapV5,32 transMapV5,237 transMapV5,258 transMapV5,757 ucscToINSDC,17 unipAliSwissprot,3 unipAliTrembl,3 uniprot,107 uniprot,190 uniprot,773 uniprot,826 uniprot,827 uniprot,844 uniprot,1206 uniprot,1275 uniprot,1668 uniprot,1947 xenoMrna,519 xenoRefGene,283 unambiguously refSeqComposite,1108 uncertain HLTOGAannotvHg38v1,235 uncheck refSeqComposite,163 undergone refGene,107 refSeqComposite,614 xenoRefGene,67 underlies genscan,142 underlying refGene,38 uniprot,1682 xenoRefGene,35 underneath chainCavPor3,841 chainHg19,832 chainMm10,832 chainMm39,832 chainMonDom5,832 chainNetCavPor3,844 chainNetHg19,834 chainNetMm10,834 chainNetMm39,835 chainNetMonDom5,835 chainNetRn6,838 chainRn6,835 netCavPor3,841 netHg19,832 netMm10,832 netMm39,832 netMonDom5,832 netRn6,835 unexpected uniprot,766 ungapped chainCavPor3,450 chainHg19,443 chainMm10,443 chainMm39,443 chainMonDom5,443 chainNetCavPor3,453 chainNetHg19,445 chainNetMm10,445 chainNetMm39,446 chainNetMonDom5,446 chainNetRn6,449 chainRn6,446 netCavPor3,450 netHg19,443 netMm10,443 netMm39,443 netMonDom5,443 netRn6,446 uniprot unipChain,2 unipConflict,3 unipDisulfBond,3 unipDomain,2 unipInterest,2 unipLocCytopl,2 unipLocExtra,2 unipLocSignal,3 unipLocTransMemb,2 unipModif,3 unipMut,2 unipOther,3 unipRepeat,2 unipStruct,2 uniprot,1 uniprot,2 uniprot,23 uniprot,30 uniprot,41 uniprot,43 uniprot,68 uniprot,152 uniprot,237 uniprot,253 uniprot,264 uniprot,275 uniprot,286 uniprot,296 uniprot,322 uniprot,332 uniprot,337 uniprot,349 uniprot,358 uniprot,371 uniprot,380 uniprot,382 uniprot,392 uniprot,413 uniprot,424 uniprot,453 uniprot,494 uniprot,529 uniprot,544 uniprot,573 uniprot,669 uniprot,714 uniprot,721 uniprot,738 uniprot,750 uniprot,779 uniprot,924 uniprot,996 uniprot,1016 uniprot,1029 uniprot,1231 uniprot,1437 uniprot,1503 uniprot,1509 uniprot,1513 uniprot,1591 uniprot,1669 uniprot,1702 uniprot,1817 uniprot,1845 uniprot,1910 uniprot,1964 uniprot,1976 uniprot,1985 uniprot,1996 uniprot-annotated uniprot,1279 unipstruct.bb uniprot,1818 uniptogenome.over.chain.gz uniprot,1896 uniprot,1912 uniprot,1934 uniptogenomelift.psl.gz uniprot,1899 unique transMapEnsemblV5,383 transMapEnsemblV5,394 transMapEnsemblV5,431 transMapEnsemblV5,442 transMapEstV5,352 transMapEstV5,363 transMapEstV5,400 transMapEstV5,411 transMapRefSeqV5,352 transMapRefSeqV5,363 transMapRefSeqV5,400 transMapRefSeqV5,411 transMapRnaV5,352 transMapRnaV5,363 transMapRnaV5,400 transMapRnaV5,411 transMapV5,458 transMapV5,469 transMapV5,506 transMapV5,517 uniprot,1600 unit geneid,174 universal uniprot,1993 university chainCavPor3,927 chainCavPor3,961 chainCavPor3,1007 chainCavPor3,1030 chainHg19,918 chainHg19,952 chainHg19,998 chainHg19,1021 chainMm10,918 chainMm10,952 chainMm10,998 chainMm10,1021 chainMm39,918 chainMm39,952 chainMm39,998 chainMm39,1021 chainMonDom5,918 chainMonDom5,952 chainMonDom5,998 chainMonDom5,1021 chainNetCavPor3,930 chainNetCavPor3,964 chainNetCavPor3,1010 chainNetCavPor3,1033 chainNetHg19,920 chainNetHg19,954 chainNetHg19,1000 chainNetHg19,1023 chainNetMm10,920 chainNetMm10,954 chainNetMm10,1000 chainNetMm10,1023 chainNetMm39,921 chainNetMm39,955 chainNetMm39,1001 chainNetMm39,1024 chainNetMonDom5,921 chainNetMonDom5,955 chainNetMonDom5,1001 chainNetMonDom5,1024 chainNetRn6,924 chainNetRn6,958 chainNetRn6,1004 chainNetRn6,1027 chainRn6,921 chainRn6,955 chainRn6,1001 chainRn6,1024 netCavPor3,927 netCavPor3,961 netCavPor3,1007 netCavPor3,1030 netHg19,918 netHg19,952 netHg19,998 netHg19,1021 netMm10,918 netMm10,952 netMm10,998 netMm10,1021 netMm39,918 netMm39,952 netMm39,998 netMm39,1021 netMonDom5,918 netMonDom5,952 netMonDom5,998 netMonDom5,1021 netRn6,921 netRn6,955 netRn6,1001 netRn6,1024 unknown rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unlikely HLTOGAannotvHg38v1,288 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainCavPor3,231 chainHg19,226 chainMm10,226 chainMm39,226 chainMonDom5,226 chainNetCavPor3,234 chainNetHg19,228 chainNetMm10,228 chainNetMm39,229 chainNetMonDom5,229 chainNetRn6,231 chainRn6,228 est,602 intronEst,683 netCavPor3,231 netHg19,226 netMm10,226 netMm39,226 netMonDom5,226 netRn6,228 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainCavPor3,189 chainHg19,184 chainMm10,184 chainMm39,184 chainMonDom5,184 chainNetCavPor3,192 chainNetHg19,186 chainNetMm10,186 chainNetMm39,187 chainNetMonDom5,187 chainNetRn6,189 chainRn6,186 netCavPor3,189 netHg19,184 netMm10,184 netMm39,184 netMonDom5,184 netRn6,186 unspliced est,6 est,631 intronEst,121 intronEst,712 unsure rmsk,263 untranscribed refSeqComposite,407 up blastHg18KG,67 gold,66 refSeqComposite,1439 refSeqComposite,1633 rmsk,146 update est,782 intronEst,866 mrna,499 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 refGene,382 refSeqComposite,1769 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoMrna,574 xenoRefGene,341 updated refGene,42 uniprot,1566 xenoRefGene,39 us uniprot,687 uniprot,1441 use est,163 gold,77 intronEst,244 mrna,109 refSeqComposite,35 refSeqComposite,1541 tRNAs,357 uniprot,991 uniprot,1021 uniprot,1073 uniprot,1225 xenoMrna,184 used HLTOGAannotvHg38v1,105 augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 blastHg18KG,186 chainCavPor3,300 chainCavPor3,674 chainCavPor3,705 chainCavPor3,796 chainCavPor3,848 chainCavPor3,881 chainHg19,293 chainHg19,665 chainHg19,696 chainHg19,787 chainHg19,839 chainHg19,872 chainMm10,293 chainMm10,665 chainMm10,696 chainMm10,787 chainMm10,839 chainMm10,872 chainMm39,293 chainMm39,665 chainMm39,696 chainMm39,787 chainMm39,839 chainMm39,872 chainMonDom5,293 chainMonDom5,665 chainMonDom5,696 chainMonDom5,787 chainMonDom5,839 chainMonDom5,872 chainNetCavPor3,303 chainNetCavPor3,677 chainNetCavPor3,708 chainNetCavPor3,799 chainNetCavPor3,851 chainNetCavPor3,884 chainNetHg19,295 chainNetHg19,667 chainNetHg19,698 chainNetHg19,789 chainNetHg19,841 chainNetHg19,874 chainNetMm10,295 chainNetMm10,667 chainNetMm10,698 chainNetMm10,789 chainNetMm10,841 chainNetMm10,874 chainNetMm39,296 chainNetMm39,668 chainNetMm39,699 chainNetMm39,790 chainNetMm39,842 chainNetMm39,875 chainNetMonDom5,296 chainNetMonDom5,668 chainNetMonDom5,699 chainNetMonDom5,790 chainNetMonDom5,842 chainNetMonDom5,875 chainNetRn6,298 chainNetRn6,671 chainNetRn6,702 chainNetRn6,793 chainNetRn6,845 chainNetRn6,878 chainRn6,295 chainRn6,668 chainRn6,699 chainRn6,790 chainRn6,842 chainRn6,875 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 ensGene,36 est,120 est,272 est,331 est,570 genscan,159 intronEst,201 intronEst,353 intronEst,412 intronEst,651 mrna,66 mrna,218 mrna,277 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netCavPor3,300 netCavPor3,674 netCavPor3,705 netCavPor3,796 netCavPor3,848 netCavPor3,881 netHg19,293 netHg19,665 netHg19,696 netHg19,787 netHg19,839 netHg19,872 netMm10,293 netMm10,665 netMm10,696 netMm10,787 netMm10,839 netMm10,872 netMm39,293 netMm39,665 netMm39,696 netMm39,787 netMm39,839 netMm39,872 netMonDom5,293 netMonDom5,665 netMonDom5,696 netMonDom5,787 netMonDom5,839 netMonDom5,872 netRn6,295 netRn6,668 netRn6,699 netRn6,790 netRn6,842 netRn6,875 refSeqComposite,233 refSeqComposite,243 refSeqComposite,996 rmsk,299 rmsk,341 transMapEnsemblV5,56 transMapEnsemblV5,64 transMapEnsemblV5,186 transMapEnsemblV5,238 transMapEnsemblV5,243 transMapEnsemblV5,263 transMapEnsemblV5,283 transMapEnsemblV5,315 transMapEnsemblV5,647 transMapEstV5,155 transMapEstV5,207 transMapEstV5,212 transMapEstV5,232 transMapEstV5,252 transMapEstV5,284 transMapEstV5,616 transMapRefSeqV5,155 transMapRefSeqV5,207 transMapRefSeqV5,212 transMapRefSeqV5,232 transMapRefSeqV5,252 transMapRefSeqV5,284 transMapRefSeqV5,616 transMapRnaV5,155 transMapRnaV5,207 transMapRnaV5,212 transMapRnaV5,232 transMapRnaV5,252 transMapRnaV5,284 transMapRnaV5,616 transMapV5,69 transMapV5,261 transMapV5,313 transMapV5,318 transMapV5,338 transMapV5,358 transMapV5,390 transMapV5,722 uniprot,1062 uniprot,1087 uniprot,1118 uniprot,1198 uniprot,1210 uniprot,1319 uniprot,1351 uniprot,1550 uniprot,1626 uniprot,1801 uniprot,1883 xenoMrna,141 xenoMrna,293 xenoMrna,352 useful chainCavPor3,284 chainCavPor3,484 chainHg19,278 chainHg19,477 chainMm10,278 chainMm10,477 chainMm39,278 chainMm39,477 chainMonDom5,278 chainMonDom5,477 chainNetCavPor3,287 chainNetCavPor3,487 chainNetHg19,280 chainNetHg19,479 chainNetMm10,280 chainNetMm10,479 chainNetMm39,281 chainNetMm39,480 chainNetMonDom5,281 chainNetMonDom5,480 chainNetRn6,283 chainNetRn6,483 chainRn6,280 chainRn6,480 microsat,20 netCavPor3,284 netCavPor3,484 netHg19,278 netHg19,477 netMm10,278 netMm10,477 netMm39,278 netMm39,477 netMonDom5,278 netMonDom5,477 netRn6,280 netRn6,480 user est,390 intronEst,471 mrna,336 transMapEnsemblV5,120 transMapEstV5,89 transMapRefSeqV5,89 transMapRnaV5,89 transMapV5,195 xenoMrna,411 users refGene,188 refSeqComposite,822 uniprot,406 uniprot,684 xenoRefGene,148 uses HLTOGAannotvHg38v1,45 HLTOGAannotvHg38v1,87 rmsk,79 tRNAs,30 using HLTOGAannotvHg38v1,6 augustusGene,294 blastHg18KG,52 blastHg18KG,76 blastHg18KG,88 chainCavPor3,77 chainCavPor3,610 chainCavPor3,770 chainHg19,74 chainHg19,602 chainHg19,761 chainMm10,74 chainMm10,602 chainMm10,761 chainMm39,74 chainMm39,602 chainMm39,761 chainMonDom5,74 chainMonDom5,602 chainMonDom5,761 chainNetCavPor3,80 chainNetCavPor3,613 chainNetCavPor3,773 chainNetHg19,76 chainNetHg19,604 chainNetHg19,763 chainNetMm10,76 chainNetMm10,604 chainNetMm10,763 chainNetMm39,77 chainNetMm39,605 chainNetMm39,764 chainNetMonDom5,77 chainNetMonDom5,605 chainNetMonDom5,764 chainNetRn6,79 chainNetRn6,608 chainNetRn6,767 chainRn6,76 chainRn6,605 chainRn6,764 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 ensGene,64 est,652 gap,123 geneid,83 geneid,162 intronEst,733 microsat,90 mrna,392 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netCavPor3,77 netCavPor3,610 netCavPor3,770 netHg19,74 netHg19,602 netHg19,761 netMm10,74 netMm10,602 netMm10,761 netMm39,74 netMm39,602 netMm39,761 netMonDom5,74 netMonDom5,602 netMonDom5,761 netRn6,76 netRn6,605 netRn6,764 refGene,264 refSeqComposite,78 refSeqComposite,1152 refSeqComposite,1202 refSeqComposite,1215 refSeqComposite,1232 refSeqComposite,1304 refSeqComposite,1502 refSeqComposite,1587 refSeqComposite,1618 rmsk,15 rmsk,290 tRNAs,21 tRNAs,401 transMapEnsemblV5,75 transMapEnsemblV5,561 transMapEnsemblV5,610 transMapEnsemblV5,762 transMapEstV5,44 transMapEstV5,530 transMapEstV5,579 transMapEstV5,731 transMapRefSeqV5,44 transMapRefSeqV5,530 transMapRefSeqV5,579 transMapRefSeqV5,731 transMapRnaV5,44 transMapRnaV5,530 transMapRnaV5,579 transMapRnaV5,731 transMapV5,43 transMapV5,81 transMapV5,124 transMapV5,135 transMapV5,142 transMapV5,636 transMapV5,685 transMapV5,837 uniprot,217 uniprot,722 uniprot,1526 xenoMrna,467 xenoRefGene,224 usually est,37 gap,130 intronEst,49 nestedRepeats,192 tRNAs,239 tRNAs,307 transMapEnsemblV5,502 transMapEstV5,471 transMapRefSeqV5,471 transMapRnaV5,471 transMapV5,577 utilities blastHg18KG,185 refSeqComposite,1525 refSeqComposite,1594 utility refSeqComposite,1590 refSeqComposite,1602 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 utr transMapV5,164 v HLTOGAannotvHg38v1,343 ensGene,185 v.1.23 tRNAs,23 v3.1 augustusGene,7 v4 transMapEnsemblV5,664 transMapEstV5,633 transMapRefSeqV5,633 transMapRnaV5,633 v5 transMapV5,2 transMapV5,739 valid est,211 intronEst,292 mrna,157 xenoMrna,232 validate refGene,191 refSeqComposite,825 xenoRefGene,151 validation genscan,107 value est,282 intronEst,363 mrna,228 xenoMrna,303 variant uniprot,2026 variants refSeqComposite,947 uniprot,357 uniprot,415 uniprot,425 uniprot,533 uniprot,943 uniprot,2042 variation microsat,7 nestedRepeats,11 refSeqComposite,1074 rmsk,6 simpleRepeat,8 uniprot,438 variety gc5Base,45 quality,60 various uniprot,50 varying gap,87 vb chainCavPor3,1034 chainHg19,1025 chainMm10,1025 chainMm39,1025 chainMonDom5,1025 chainNetCavPor3,1037 chainNetHg19,1027 chainNetMm10,1027 chainNetMm39,1028 chainNetMonDom5,1028 chainNetRn6,1031 chainRn6,1028 netCavPor3,1034 netHg19,1025 netMm10,1025 netMm39,1025 netMonDom5,1025 netRn6,1028 vector est,467 intronEst,548 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 ctgPos2,21 refSeqComposite,1131 refSeqComposite,1565 rmsk,58 transMapEnsemblV5,8 transMapEstV5,6 transMapRefSeqV5,7 transMapRnaV5,7 transMapV5,5 uniprot,1254 uniprot,1297 uniprot,1576 uniprot,1593 versions augustusGene,279 ensGene,133 nestedRepeats,251 nestedRepeats,267 refSeqComposite,1337 refSeqComposite,1691 uniprot,1655 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 tRNAs,160 transMapEnsemblV5,31 transMapEnsemblV5,158 transMapEnsemblV5,191 transMapEstV5,29 transMapEstV5,127 transMapEstV5,160 transMapRefSeqV5,29 transMapRefSeqV5,127 transMapRefSeqV5,160 transMapRnaV5,29 transMapRnaV5,127 transMapRnaV5,160 transMapV5,28 transMapV5,113 transMapV5,233 transMapV5,266 xenoMrna,18 vertebrates augustusGene,209 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very est,673 intronEst,754 uniprot,977 uniprot,1185 uniprot,1399 uniprot,1402 via transMapEnsemblV5,326 transMapEstV5,295 transMapRefSeqV5,295 transMapRnaV5,295 transMapV5,401 uniprot,1293 view chainCavPor3,461 chainHg19,454 chainMm10,454 chainMm39,454 chainMonDom5,454 chainNetCavPor3,464 chainNetHg19,456 chainNetMm10,456 chainNetMm39,457 chainNetMonDom5,457 chainNetRn6,460 chainRn6,457 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 est,207 intronEst,288 mrna,153 netCavPor3,461 netHg19,454 netMm10,454 netMm39,454 netMonDom5,454 netRn6,457 xenoMrna,228 viewed est,635 gold,69 intronEst,716 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 uniprot,147 visit refGene,45 refSeqComposite,103 vs HLTOGAannotvHg38v1,2 w blastHg18KG,156 blastHg18KG,158 chainCavPor3,1036 chainCavPor3,1056 chainCavPor3,1104 chainHg19,1027 chainHg19,1047 chainHg19,1095 chainMm10,1027 chainMm10,1047 chainMm10,1095 chainMm39,1027 chainMm39,1047 chainMm39,1095 chainMonDom5,1027 chainMonDom5,1047 chainMonDom5,1095 chainNetCavPor3,1039 chainNetCavPor3,1059 chainNetCavPor3,1107 chainNetHg19,1029 chainNetHg19,1049 chainNetHg19,1097 chainNetMm10,1029 chainNetMm10,1049 chainNetMm10,1097 chainNetMm39,1030 chainNetMm39,1050 chainNetMm39,1098 chainNetMonDom5,1030 chainNetMonDom5,1050 chainNetMonDom5,1098 chainNetRn6,1033 chainNetRn6,1053 chainNetRn6,1101 chainRn6,1030 chainRn6,1050 chainRn6,1098 gold,135 netCavPor3,1036 netCavPor3,1056 netCavPor3,1104 netHg19,1027 netHg19,1047 netHg19,1095 netMm10,1027 netMm10,1047 netMm10,1095 netMm39,1027 netMm39,1047 netMm39,1095 netMonDom5,1027 netMonDom5,1047 netMonDom5,1095 netRn6,1030 netRn6,1050 netRn6,1098 waack augustusGene,318 want uniprot,690 was HLTOGAannotvHg38v1,317 augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 blastHg18KG,178 chainCavPor3,655 chainCavPor3,673 chainCavPor3,794 chainCavPor3,839 chainCavPor3,847 chainCavPor3,867 chainCavPor3,879 chainCavPor3,904 chainCavPor3,922 chainCavPor3,957 chainHg19,646 chainHg19,664 chainHg19,785 chainHg19,830 chainHg19,838 chainHg19,858 chainHg19,870 chainHg19,895 chainHg19,913 chainHg19,948 chainMm10,646 chainMm10,664 chainMm10,785 chainMm10,830 chainMm10,838 chainMm10,858 chainMm10,870 chainMm10,895 chainMm10,913 chainMm10,948 chainMm39,646 chainMm39,664 chainMm39,785 chainMm39,830 chainMm39,838 chainMm39,858 chainMm39,870 chainMm39,895 chainMm39,913 chainMm39,948 chainMonDom5,646 chainMonDom5,664 chainMonDom5,785 chainMonDom5,830 chainMonDom5,838 chainMonDom5,858 chainMonDom5,870 chainMonDom5,895 chainMonDom5,913 chainMonDom5,948 chainNetCavPor3,658 chainNetCavPor3,676 chainNetCavPor3,797 chainNetCavPor3,842 chainNetCavPor3,850 chainNetCavPor3,870 chainNetCavPor3,882 chainNetCavPor3,907 chainNetCavPor3,925 chainNetCavPor3,960 chainNetHg19,648 chainNetHg19,666 chainNetHg19,787 chainNetHg19,832 chainNetHg19,840 chainNetHg19,860 chainNetHg19,872 chainNetHg19,897 chainNetHg19,915 chainNetHg19,950 chainNetMm10,648 chainNetMm10,666 chainNetMm10,787 chainNetMm10,832 chainNetMm10,840 chainNetMm10,860 chainNetMm10,872 chainNetMm10,897 chainNetMm10,915 chainNetMm10,950 chainNetMm39,649 chainNetMm39,667 chainNetMm39,788 chainNetMm39,833 chainNetMm39,841 chainNetMm39,861 chainNetMm39,873 chainNetMm39,898 chainNetMm39,916 chainNetMm39,951 chainNetMonDom5,649 chainNetMonDom5,667 chainNetMonDom5,788 chainNetMonDom5,833 chainNetMonDom5,841 chainNetMonDom5,861 chainNetMonDom5,873 chainNetMonDom5,898 chainNetMonDom5,916 chainNetMonDom5,951 chainNetRn6,652 chainNetRn6,670 chainNetRn6,791 chainNetRn6,836 chainNetRn6,844 chainNetRn6,864 chainNetRn6,876 chainNetRn6,901 chainNetRn6,919 chainNetRn6,954 chainRn6,649 chainRn6,667 chainRn6,788 chainRn6,833 chainRn6,841 chainRn6,861 chainRn6,873 chainRn6,898 chainRn6,916 chainRn6,951 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 est,695 est,724 intronEst,776 intronEst,808 microsat,108 mrna,411 mrna,441 netCavPor3,655 netCavPor3,673 netCavPor3,794 netCavPor3,839 netCavPor3,847 netCavPor3,867 netCavPor3,879 netCavPor3,904 netCavPor3,922 netCavPor3,957 netHg19,646 netHg19,664 netHg19,785 netHg19,830 netHg19,838 netHg19,858 netHg19,870 netHg19,895 netHg19,913 netHg19,948 netMm10,646 netMm10,664 netMm10,785 netMm10,830 netMm10,838 netMm10,858 netMm10,870 netMm10,895 netMm10,913 netMm10,948 netMm39,646 netMm39,664 netMm39,785 netMm39,830 netMm39,838 netMm39,858 netMm39,870 netMm39,895 netMm39,913 netMm39,948 netMonDom5,646 netMonDom5,664 netMonDom5,785 netMonDom5,830 netMonDom5,838 netMonDom5,858 netMonDom5,870 netMonDom5,895 netMonDom5,913 netMonDom5,948 netRn6,649 netRn6,667 netRn6,788 netRn6,833 netRn6,841 netRn6,861 netRn6,873 netRn6,898 netRn6,916 netRn6,951 refGene,291 refGene,320 refSeqComposite,499 refSeqComposite,1259 refSeqComposite,1709 rmsk,12 rmsk,262 simpleRepeat,68 transMapEnsemblV5,220 transMapEnsemblV5,237 transMapEnsemblV5,282 transMapEnsemblV5,314 transMapEnsemblV5,676 transMapEstV5,189 transMapEstV5,206 transMapEstV5,251 transMapEstV5,283 transMapEstV5,645 transMapRefSeqV5,189 transMapRefSeqV5,206 transMapRefSeqV5,251 transMapRefSeqV5,283 transMapRefSeqV5,645 transMapRnaV5,189 transMapRnaV5,206 transMapRnaV5,251 transMapRnaV5,283 transMapRnaV5,645 transMapV5,295 transMapV5,312 transMapV5,357 transMapV5,389 transMapV5,751 ucscToINSDC,48 uniprot,799 uniprot,815 uniprot,1354 uniprot,1625 uniprot,1941 xenoMrna,485 xenoMrna,516 xenoRefGene,251 xenoRefGene,280 way transMapEnsemblV5,587 transMapEstV5,556 transMapRefSeqV5,556 transMapRnaV5,556 transMapV5,662 uniprot,1459 ways gc5Base,47 quality,62 refSeqComposite,1298 we ensGene,146 refSeqComposite,76 rmsk,122 uniprot,1224 uniprot,1453 uniprot,1859 weaker HLTOGAannotvHg38v1,198 webb chainCavPor3,936 chainCavPor3,973 chainHg19,927 chainHg19,964 chainMm10,927 chainMm10,964 chainMm39,927 chainMm39,964 chainMonDom5,927 chainMonDom5,964 chainNetCavPor3,939 chainNetCavPor3,976 chainNetHg19,929 chainNetHg19,966 chainNetMm10,929 chainNetMm10,966 chainNetMm39,930 chainNetMm39,967 chainNetMonDom5,930 chainNetMonDom5,967 chainNetRn6,933 chainNetRn6,970 chainRn6,930 chainRn6,967 netCavPor3,936 netCavPor3,973 netHg19,927 netHg19,964 netMm10,927 netMm10,964 netMm39,927 netMm39,964 netMonDom5,927 netMonDom5,964 netRn6,930 netRn6,967 weekly refGene,43 xenoRefGene,40 weight geneid,85 tRNAs,493 well augustusGene,78 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 est,539 est,562 genscan,36 intronEst,620 intronEst,643 rmsk,54 were augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 blastHg18KG,46 blastHg18KG,70 blastHg18KG,85 blastHg18KG,112 blastHg18KG,134 blastHg18KG,191 chainCavPor3,583 chainCavPor3,591 chainCavPor3,598 chainCavPor3,605 chainCavPor3,617 chainCavPor3,691 chainCavPor3,765 chainCavPor3,945 chainCavPor3,989 chainCavPor3,1003 chainHg19,575 chainHg19,583 chainHg19,590 chainHg19,597 chainHg19,609 chainHg19,682 chainHg19,756 chainHg19,936 chainHg19,980 chainHg19,994 chainMm10,575 chainMm10,583 chainMm10,590 chainMm10,597 chainMm10,609 chainMm10,682 chainMm10,756 chainMm10,936 chainMm10,980 chainMm10,994 chainMm39,575 chainMm39,583 chainMm39,590 chainMm39,597 chainMm39,609 chainMm39,682 chainMm39,756 chainMm39,936 chainMm39,980 chainMm39,994 chainMonDom5,575 chainMonDom5,583 chainMonDom5,590 chainMonDom5,597 chainMonDom5,609 chainMonDom5,682 chainMonDom5,756 chainMonDom5,936 chainMonDom5,980 chainMonDom5,994 chainNetCavPor3,586 chainNetCavPor3,594 chainNetCavPor3,601 chainNetCavPor3,608 chainNetCavPor3,620 chainNetCavPor3,694 chainNetCavPor3,768 chainNetCavPor3,948 chainNetCavPor3,992 chainNetCavPor3,1006 chainNetHg19,577 chainNetHg19,585 chainNetHg19,592 chainNetHg19,599 chainNetHg19,611 chainNetHg19,684 chainNetHg19,758 chainNetHg19,938 chainNetHg19,982 chainNetHg19,996 chainNetMm10,577 chainNetMm10,585 chainNetMm10,592 chainNetMm10,599 chainNetMm10,611 chainNetMm10,684 chainNetMm10,758 chainNetMm10,938 chainNetMm10,982 chainNetMm10,996 chainNetMm39,578 chainNetMm39,586 chainNetMm39,593 chainNetMm39,600 chainNetMm39,612 chainNetMm39,685 chainNetMm39,759 chainNetMm39,939 chainNetMm39,983 chainNetMm39,997 chainNetMonDom5,578 chainNetMonDom5,586 chainNetMonDom5,593 chainNetMonDom5,600 chainNetMonDom5,612 chainNetMonDom5,685 chainNetMonDom5,759 chainNetMonDom5,939 chainNetMonDom5,983 chainNetMonDom5,997 chainNetRn6,581 chainNetRn6,589 chainNetRn6,596 chainNetRn6,603 chainNetRn6,615 chainNetRn6,688 chainNetRn6,762 chainNetRn6,942 chainNetRn6,986 chainNetRn6,1000 chainRn6,578 chainRn6,586 chainRn6,593 chainRn6,600 chainRn6,612 chainRn6,685 chainRn6,759 chainRn6,939 chainRn6,983 chainRn6,997 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 ensGene,13 est,589 est,647 est,719 gc5Base,79 gold,22 gold,29 intronEst,670 intronEst,728 mrna,387 mrna,435 netCavPor3,583 netCavPor3,591 netCavPor3,598 netCavPor3,605 netCavPor3,617 netCavPor3,691 netCavPor3,765 netCavPor3,945 netCavPor3,989 netCavPor3,1003 netHg19,575 netHg19,583 netHg19,590 netHg19,597 netHg19,609 netHg19,682 netHg19,756 netHg19,936 netHg19,980 netHg19,994 netMm10,575 netMm10,583 netMm10,590 netMm10,597 netMm10,609 netMm10,682 netMm10,756 netMm10,936 netMm10,980 netMm10,994 netMm39,575 netMm39,583 netMm39,590 netMm39,597 netMm39,609 netMm39,682 netMm39,756 netMm39,936 netMm39,980 netMm39,994 netMonDom5,575 netMonDom5,583 netMonDom5,590 netMonDom5,597 netMonDom5,609 netMonDom5,682 netMonDom5,756 netMonDom5,936 netMonDom5,980 netMonDom5,994 netRn6,578 netRn6,586 netRn6,593 netRn6,600 netRn6,612 netRn6,685 netRn6,759 netRn6,939 netRn6,983 netRn6,997 quality,88 quality,103 refGene,258 refGene,274 refGene,315 refSeqComposite,100 refSeqComposite,248 refSeqComposite,357 refSeqComposite,419 refSeqComposite,1148 refSeqComposite,1161 refSeqComposite,1226 refSeqComposite,1242 refSeqComposite,1283 tRNAs,345 transMapEnsemblV5,155 transMapEnsemblV5,185 transMapEnsemblV5,211 transMapEnsemblV5,242 transMapEnsemblV5,248 transMapEnsemblV5,262 transMapEnsemblV5,348 transMapEnsemblV5,379 transMapEnsemblV5,392 transMapEstV5,124 transMapEstV5,154 transMapEstV5,180 transMapEstV5,211 transMapEstV5,217 transMapEstV5,231 transMapEstV5,317 transMapEstV5,348 transMapEstV5,361 transMapRefSeqV5,124 transMapRefSeqV5,154 transMapRefSeqV5,180 transMapRefSeqV5,211 transMapRefSeqV5,217 transMapRefSeqV5,231 transMapRefSeqV5,317 transMapRefSeqV5,348 transMapRefSeqV5,361 transMapRnaV5,124 transMapRnaV5,154 transMapRnaV5,180 transMapRnaV5,211 transMapRnaV5,217 transMapRnaV5,231 transMapRnaV5,317 transMapRnaV5,348 transMapRnaV5,361 transMapV5,115 transMapV5,128 transMapV5,230 transMapV5,260 transMapV5,286 transMapV5,317 transMapV5,323 transMapV5,337 transMapV5,423 transMapV5,454 transMapV5,467 ucscToINSDC,35 uniprot,782 uniprot,794 uniprot,930 uniprot,937 uniprot,1386 uniprot,1471 uniprot,1505 uniprot,1515 xenoMrna,461 xenoMrna,510 xenoRefGene,218 xenoRefGene,234 xenoRefGene,275 wget uniprot,1903 uniprot,1913 wgs ctgPos2,15 what tRNAs,112 wheeler est,779 intronEst,863 mrna,496 xenoMrna,571 when augustusGene,188 augustusGene,238 chainCavPor3,412 chainHg19,405 chainMm10,405 chainMm39,405 chainMonDom5,405 chainNetCavPor3,415 chainNetHg19,407 chainNetMm10,407 chainNetMm39,408 chainNetMonDom5,408 chainNetRn6,411 chainRn6,408 est,143 est,153 est,680 gold,26 intronEst,33 intronEst,224 intronEst,234 intronEst,761 mrna,89 mrna,99 mrna,396 netCavPor3,412 netHg19,405 netMm10,405 netMm39,405 netMonDom5,405 netRn6,408 quality,40 refGene,276 refSeqComposite,1088 refSeqComposite,1244 tRNAs,355 transMapEnsemblV5,465 transMapEstV5,434 transMapRefSeqV5,434 transMapRnaV5,434 transMapV5,540 uniprot,951 uniprot,1202 uniprot,1632 xenoMrna,164 xenoMrna,174 xenoMrna,470 xenoRefGene,236 where chainCavPor3,196 chainHg19,191 chainMm10,191 chainMm39,191 chainMonDom5,191 chainNetCavPor3,199 chainNetHg19,193 chainNetMm10,193 chainNetMm39,194 chainNetMonDom5,194 chainNetRn6,196 chainRn6,193 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,84 netCavPor3,196 netHg19,191 netMm10,191 netMm39,191 netMonDom5,191 netRn6,193 transMapEnsemblV5,270 transMapEnsemblV5,371 transMapEnsemblV5,420 transMapEnsemblV5,508 transMapEstV5,239 transMapEstV5,340 transMapEstV5,389 transMapEstV5,477 transMapRefSeqV5,239 transMapRefSeqV5,340 transMapRefSeqV5,389 transMapRefSeqV5,477 transMapRnaV5,239 transMapRnaV5,340 transMapRnaV5,389 transMapRnaV5,477 transMapV5,345 transMapV5,446 transMapV5,495 transMapV5,583 uniprot,1192 whether chainCavPor3,863 chainHg19,854 chainMm10,854 chainMm39,854 chainMonDom5,854 chainNetCavPor3,866 chainNetHg19,856 chainNetMm10,856 chainNetMm39,857 chainNetMonDom5,857 chainNetRn6,860 chainRn6,857 netCavPor3,863 netHg19,854 netMm10,854 netMm39,854 netMonDom5,854 netRn6,857 tRNAs,138 which augustusGene,159 augustusGene,227 chainCavPor3,329 chainCavPor3,621 chainCavPor3,828 chainHg19,322 chainHg19,613 chainHg19,819 chainMm10,322 chainMm10,613 chainMm10,819 chainMm39,322 chainMm39,613 chainMm39,819 chainMonDom5,322 chainMonDom5,613 chainMonDom5,819 chainNetCavPor3,332 chainNetCavPor3,624 chainNetCavPor3,831 chainNetHg19,324 chainNetHg19,615 chainNetHg19,821 chainNetMm10,324 chainNetMm10,615 chainNetMm10,821 chainNetMm39,325 chainNetMm39,616 chainNetMm39,822 chainNetMonDom5,325 chainNetMonDom5,616 chainNetMonDom5,822 chainNetRn6,328 chainNetRn6,619 chainNetRn6,825 chainRn6,325 chainRn6,616 chainRn6,822 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 est,103 est,230 est,496 est,521 est,667 geneid,32 intronEst,184 intronEst,311 intronEst,577 intronEst,602 intronEst,748 mrna,176 nestedRepeats,31 nestedRepeats,87 netCavPor3,329 netCavPor3,621 netCavPor3,828 netHg19,322 netHg19,613 netHg19,819 netMm10,322 netMm10,613 netMm10,819 netMm39,322 netMm39,613 netMm39,819 netMonDom5,322 netMonDom5,613 netMonDom5,819 netRn6,325 netRn6,616 netRn6,822 refSeqComposite,46 refSeqComposite,261 refSeqComposite,1478 refSeqComposite,1506 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 transMapEnsemblV5,614 transMapEstV5,583 transMapRefSeqV5,583 transMapRnaV5,583 transMapV5,144 transMapV5,689 uniprot,158 uniprot,1380 uniprot,1768 xenoMrna,251 while chainCavPor3,219 chainHg19,214 chainMm10,214 chainMm39,214 chainMonDom5,214 chainNetCavPor3,222 chainNetHg19,216 chainNetMm10,216 chainNetMm39,217 chainNetMonDom5,217 chainNetRn6,219 chainRn6,216 netCavPor3,219 netHg19,214 netMm10,214 netMm39,214 netMonDom5,214 netRn6,216 white gap,52 whole HLTOGAannotvHg38v1,63 chainCavPor3,469 chainHg19,462 chainMm10,462 chainMm39,462 chainMonDom5,462 chainNetCavPor3,472 chainNetHg19,464 chainNetMm10,464 chainNetMm39,465 chainNetMonDom5,465 chainNetRn6,468 chainRn6,465 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 ctgPos2,12 gap,76 gap,119 gold,137 netCavPor3,469 netHg19,462 netMm10,462 netMm39,462 netMonDom5,462 netRn6,465 refSeqComposite,1494 transMapEnsemblV5,604 transMapEstV5,573 transMapRefSeqV5,573 transMapRnaV5,573 transMapV5,679 whole-genome gold,19 whose refSeqComposite,220 refSeqComposite,349 refSeqComposite,963 transMapEnsemblV5,217 transMapEstV5,186 transMapRefSeqV5,186 transMapRnaV5,186 transMapV5,292 xenoMrna,78 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 wildcards est,268 intronEst,349 mrna,214 xenoMrna,289 will est,301 est,319 est,348 est,365 intronEst,382 intronEst,400 intronEst,429 intronEst,446 mrna,247 mrna,265 mrna,294 mrna,311 rmsk,277 rmsk,283 transMapEnsemblV5,61 uniprot,537 uniprot,665 uniprot,754 uniprot,1142 uniprot,1162 xenoMrna,322 xenoMrna,340 xenoMrna,369 xenoMrna,386 windows gc5Base,7 gc5Base,28 wish est,232 intronEst,313 mrna,178 refGene,245 refSeqComposite,172 xenoMrna,253 xenoRefGene,205 with HLTOGAannotvHg38v1,359 augustusGene,127 augustusGene,322 blastHg18KG,48 blastHg18KG,72 chainCavPor3,44 chainCavPor3,210 chainCavPor3,221 chainCavPor3,593 chainCavPor3,706 chainCavPor3,782 chainCavPor3,906 chainCavPor3,938 chainCavPor3,970 chainCavPor3,1107 chainHg19,42 chainHg19,205 chainHg19,216 chainHg19,585 chainHg19,697 chainHg19,773 chainHg19,897 chainHg19,929 chainHg19,961 chainHg19,1098 chainMm10,42 chainMm10,205 chainMm10,216 chainMm10,585 chainMm10,697 chainMm10,773 chainMm10,897 chainMm10,929 chainMm10,961 chainMm10,1098 chainMm39,42 chainMm39,205 chainMm39,216 chainMm39,585 chainMm39,697 chainMm39,773 chainMm39,897 chainMm39,929 chainMm39,961 chainMm39,1098 chainMonDom5,42 chainMonDom5,205 chainMonDom5,216 chainMonDom5,585 chainMonDom5,697 chainMonDom5,773 chainMonDom5,897 chainMonDom5,929 chainMonDom5,961 chainMonDom5,1098 chainNetCavPor3,47 chainNetCavPor3,213 chainNetCavPor3,224 chainNetCavPor3,596 chainNetCavPor3,709 chainNetCavPor3,785 chainNetCavPor3,909 chainNetCavPor3,941 chainNetCavPor3,973 chainNetCavPor3,1110 chainNetHg19,44 chainNetHg19,207 chainNetHg19,218 chainNetHg19,587 chainNetHg19,699 chainNetHg19,775 chainNetHg19,899 chainNetHg19,931 chainNetHg19,963 chainNetHg19,1100 chainNetMm10,44 chainNetMm10,207 chainNetMm10,218 chainNetMm10,587 chainNetMm10,699 chainNetMm10,775 chainNetMm10,899 chainNetMm10,931 chainNetMm10,963 chainNetMm10,1100 chainNetMm39,45 chainNetMm39,208 chainNetMm39,219 chainNetMm39,588 chainNetMm39,700 chainNetMm39,776 chainNetMm39,900 chainNetMm39,932 chainNetMm39,964 chainNetMm39,1101 chainNetMonDom5,45 chainNetMonDom5,208 chainNetMonDom5,219 chainNetMonDom5,588 chainNetMonDom5,700 chainNetMonDom5,776 chainNetMonDom5,900 chainNetMonDom5,932 chainNetMonDom5,964 chainNetMonDom5,1101 chainNetRn6,46 chainNetRn6,210 chainNetRn6,221 chainNetRn6,591 chainNetRn6,703 chainNetRn6,779 chainNetRn6,903 chainNetRn6,935 chainNetRn6,967 chainNetRn6,1104 chainRn6,43 chainRn6,207 chainRn6,218 chainRn6,588 chainRn6,700 chainRn6,776 chainRn6,900 chainRn6,932 chainRn6,964 chainRn6,1101 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 ctgPos2,38 ctgPos2,48 est,102 est,498 est,636 est,672 est,715 gap,174 gc5Base,35 geneid,62 intronEst,183 intronEst,579 intronEst,717 intronEst,753 intronEst,796 microsat,69 microsat,76 mrna,431 nestedRepeats,133 netCavPor3,44 netCavPor3,210 netCavPor3,221 netCavPor3,593 netCavPor3,706 netCavPor3,782 netCavPor3,906 netCavPor3,938 netCavPor3,970 netCavPor3,1107 netHg19,42 netHg19,205 netHg19,216 netHg19,585 netHg19,697 netHg19,773 netHg19,897 netHg19,929 netHg19,961 netHg19,1098 netMm10,42 netMm10,205 netMm10,216 netMm10,585 netMm10,697 netMm10,773 netMm10,897 netMm10,929 netMm10,961 netMm10,1098 netMm39,42 netMm39,205 netMm39,216 netMm39,585 netMm39,697 netMm39,773 netMm39,897 netMm39,929 netMm39,961 netMm39,1098 netMonDom5,42 netMonDom5,205 netMonDom5,216 netMonDom5,585 netMonDom5,697 netMonDom5,773 netMonDom5,897 netMonDom5,929 netMonDom5,961 netMonDom5,1098 netRn6,43 netRn6,207 netRn6,218 netRn6,588 netRn6,700 netRn6,776 netRn6,900 netRn6,932 netRn6,964 netRn6,1101 refGene,267 refGene,311 refSeqComposite,223 refSeqComposite,352 refSeqComposite,488 refSeqComposite,950 refSeqComposite,979 refSeqComposite,1038 refSeqComposite,1065 refSeqComposite,1091 refSeqComposite,1130 refSeqComposite,1235 refSeqComposite,1279 refSeqComposite,1397 rmsk,111 rmsk,225 simpleRepeat,52 tRNAs,7 tRNAs,58 tRNAs,85 tRNAs,119 tRNAs,162 tRNAs,177 tRNAs,197 tRNAs,242 transMapEnsemblV5,51 transMapEnsemblV5,182 transMapEnsemblV5,250 transMapEnsemblV5,350 transMapEnsemblV5,352 transMapEnsemblV5,581 transMapEstV5,151 transMapEstV5,219 transMapEstV5,319 transMapEstV5,321 transMapEstV5,550 transMapRefSeqV5,151 transMapRefSeqV5,219 transMapRefSeqV5,319 transMapRefSeqV5,321 transMapRefSeqV5,550 transMapRnaV5,151 transMapRnaV5,219 transMapRnaV5,319 transMapRnaV5,321 transMapRnaV5,550 transMapV5,257 transMapV5,325 transMapV5,425 transMapV5,427 transMapV5,656 uniprot,183 uniprot,258 uniprot,280 uniprot,458 uniprot,639 uniprot,716 uniprot,788 uniprot,946 uniprot,1475 uniprot,1481 uniprot,1496 uniprot,1501 uniprot,1718 uniprot,1948 xenoMrna,506 xenoRefGene,227 xenoRefGene,271 within est,136 est,549 est,704 gold,47 gold,106 gold,127 intronEst,217 intronEst,630 intronEst,785 mrna,82 mrna,420 refGene,122 refGene,300 refSeqComposite,721 refSeqComposite,1268 simpleRepeat,37 transMapEnsemblV5,652 transMapEstV5,621 transMapRefSeqV5,621 transMapRnaV5,621 transMapV5,727 uniprot,1109 uniprot,1313 uniprot,1345 uniprot,1488 uniprot,1806 xenoMrna,157 xenoMrna,495 xenoRefGene,82 xenoRefGene,260 without uniprot,139 wj chainCavPor3,1050 chainCavPor3,1092 chainHg19,1041 chainHg19,1083 chainMm10,1041 chainMm10,1083 chainMm39,1041 chainMm39,1083 chainMonDom5,1041 chainMonDom5,1083 chainNetCavPor3,1053 chainNetCavPor3,1095 chainNetHg19,1043 chainNetHg19,1085 chainNetMm10,1043 chainNetMm10,1085 chainNetMm39,1044 chainNetMm39,1086 chainNetMonDom5,1044 chainNetMonDom5,1086 chainNetRn6,1047 chainNetRn6,1089 chainRn6,1044 chainRn6,1086 est,798 intronEst,882 mrna,515 netCavPor3,1050 netCavPor3,1092 netHg19,1041 netHg19,1083 netMm10,1041 netMm10,1083 netMm39,1041 netMm39,1083 netMonDom5,1041 netMonDom5,1083 netRn6,1044 netRn6,1086 refGene,341 refSeqComposite,1728 xenoMrna,590 xenoRefGene,301 words uniprot,1201 worldwide est,741 intronEst,825 mrna,458 refGene,331 refSeqComposite,1718 transMapEnsemblV5,698 transMapEstV5,667 transMapRefSeqV5,667 transMapRnaV5,667 transMapV5,773 xenoMrna,533 xenoRefGene,291 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 ensGene,147 wrench refSeqComposite,749 written blastHg18KG,179 blastHg18KG,192 genscan,19 microsat,109 quality,104 simpleRepeat,69 www.repeatmasker.org nestedRepeats,333 rmsk,356 x uniprot,1923 xm refSeqComposite,353 xm_ ncbiRefSeq,10 ncbiRefSeqOther,10 ncbiRefSeqPredicted,8 xml uniprot,1510 xr refSeqComposite,355 xr_ ncbiRefSeq,12 ncbiRefSeqOther,11 ncbiRefSeqPredicted,10 y ensGene,177 yap chainCavPor3,1033 chainHg19,1024 chainMm10,1024 chainMm39,1024 chainMonDom5,1024 chainNetCavPor3,1036 chainNetHg19,1026 chainNetMm10,1026 chainNetMm39,1027 chainNetMonDom5,1027 chainNetRn6,1030 chainRn6,1027 netCavPor3,1033 netHg19,1024 netMm10,1024 netMm39,1024 netMonDom5,1024 netRn6,1027 years uniprot,933 yet refSeqComposite,672 refSeqComposite,697 yip uniprot,2010 yl uniprot,2011 you est,231 intronEst,312 mrna,177 refGene,244 refSeqComposite,171 refSeqComposite,1347 refSeqComposite,1455 refSeqComposite,1539 refSeqComposite,1559 refSeqComposite,1629 rmsk,115 uniprot,655 uniprot,689 uniprot,1443 xenoMrna,252 xenoRefGene,204 younger nestedRepeats,94 your refSeqComposite,1521 refSeqComposite,1634 transMapEnsemblV5,629 transMapEstV5,598 transMapRefSeqV5,598 transMapRnaV5,598 transMapV5,704 uniprot,1783 yp refSeqComposite,228 refSeqComposite,231 refSeqComposite,241 yp_ ncbiRefSeq,14 ncbiRefSeqCurated,12 ncbiRefSeqOther,14 z chainCavPor3,1096 chainHg19,1087 chainMm10,1087 chainMm39,1087 chainMonDom5,1087 chainNetCavPor3,1099 chainNetHg19,1089 chainNetMm10,1089 chainNetMm39,1090 chainNetMonDom5,1090 chainNetRn6,1093 chainRn6,1090 netCavPor3,1096 netHg19,1087 netMm10,1087 netMm39,1087 netMonDom5,1087 netRn6,1090 zebrafish augustusGene,202 augustusGene,278 zhang chainCavPor3,934 chainCavPor3,1095 chainHg19,925 chainHg19,1086 chainMm10,925 chainMm10,1086 chainMm39,925 chainMm39,1086 chainMonDom5,925 chainMonDom5,1086 chainNetCavPor3,937 chainNetCavPor3,1098 chainNetHg19,927 chainNetHg19,1088 chainNetMm10,927 chainNetMm10,1088 chainNetMm39,928 chainNetMm39,1089 chainNetMonDom5,928 chainNetMonDom5,1089 chainNetRn6,931 chainNetRn6,1092 chainRn6,928 chainRn6,1089 netCavPor3,934 netCavPor3,1095 netHg19,925 netHg19,1086 netMm10,925 netMm10,1086 netMm39,925 netMm39,1086 netMonDom5,925 netMonDom5,1086 netRn6,928 netRn6,1089 zheng chainCavPor3,933 chainHg19,924 chainMm10,924 chainMm39,924 chainMonDom5,924 chainNetCavPor3,936 chainNetHg19,926 chainNetMm10,926 chainNetMm39,927 chainNetMonDom5,927 chainNetRn6,930 chainRn6,927 netCavPor3,933 netHg19,924 netMm10,924 netMm39,924 netMonDom5,924 netRn6,927 zhu transMapEnsemblV5,784 transMapEstV5,753 transMapRefSeqV5,753 transMapRnaV5,753 transMapV5,859 zinc uniprot,326 zone tRNAs,208 zoomed quality,41 zoomed-in genscan,103