0 nestedRepeats,237 transMapEnsemblV5,672 transMapEstV5,641 transMapRefSeqV5,641 transMapRnaV5,641 transMapV5,747 uniprot,1822 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1 refGene,303 refSeqComposite,1274 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.5 augustusGene,138 est,709 intronEst,790 mrna,425 transMapEnsemblV5,226 transMapEnsemblV5,361 transMapEstV5,195 transMapEstV5,330 transMapRefSeqV5,195 transMapRefSeqV5,330 transMapRnaV5,195 transMapRnaV5,330 transMapV5,301 transMapV5,436 xenoRefGene,264 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 est,669 intronEst,750 transMapV5,110 1 HLTOGAannotvHg38v1,239 augustusGene,310 chainGalGal3,394 chainGalGal3,525 chainGalGal3,717 chainGalGal3,1116 chainGalVar1,405 chainGalVar1,536 chainGalVar1,732 chainGalVar1,1131 chainHg19,391 chainHg19,522 chainHg19,714 chainHg19,1113 chainMm10,391 chainMm10,522 chainMm10,714 chainMm10,1113 chainMm39,391 chainMm39,522 chainMm39,714 chainMm39,1113 chainMonDom4,391 chainMonDom4,522 chainMonDom4,714 chainMonDom4,1113 chainNetGalGal3,397 chainNetGalGal3,528 chainNetGalGal3,720 chainNetGalGal3,1119 chainNetGalVar1,408 chainNetGalVar1,539 chainNetGalVar1,735 chainNetGalVar1,1134 chainNetHg19,394 chainNetHg19,525 chainNetHg19,717 chainNetHg19,1116 chainNetMm10,393 chainNetMm10,524 chainNetMm10,716 chainNetMm10,1115 chainNetMm39,394 chainNetMm39,525 chainNetMm39,717 chainNetMm39,1116 chainNetMonDom4,394 chainNetMonDom4,525 chainNetMonDom4,717 chainNetMonDom4,1116 chainNetOryCun2,394 chainNetOryCun2,525 chainNetOryCun2,717 chainNetOryCun2,1116 chainNetRn6,397 chainNetRn6,528 chainNetRn6,720 chainNetRn6,1119 chainOryCun2,391 chainOryCun2,522 chainOryCun2,714 chainOryCun2,1113 chainRn6,394 chainRn6,525 chainRn6,717 chainRn6,1116 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 ensGene,200 ensGene,202 est,792 genscan,227 intronEst,876 mrna,509 netGalGal3,394 netGalGal3,525 netGalGal3,717 netGalGal3,1116 netGalVar1,405 netGalVar1,536 netGalVar1,732 netGalVar1,1131 netHg19,391 netHg19,522 netHg19,714 netHg19,1113 netMm10,391 netMm10,522 netMm10,714 netMm10,1113 netMm39,391 netMm39,522 netMm39,714 netMm39,1113 netMonDom4,391 netMonDom4,522 netMonDom4,714 netMonDom4,1113 netOryCun2,391 netOryCun2,522 netOryCun2,714 netOryCun2,1113 netRn6,394 netRn6,525 netRn6,717 netRn6,1116 nscanGene,329 nscanGene,356 refGene,427 refSeqComposite,1817 tRNAs,93 tRNAs,462 transMapEnsemblV5,781 transMapEstV5,750 transMapRefSeqV5,750 transMapRnaV5,750 transMapV5,856 uniprot,1110 uniprot,1314 uniprot,1346 uniprot,1490 uniprot,1927 xenoMrna,499 xenoMrna,583 xenoRefGene,387 1.0 transMapEnsemblV5,369 transMapEstV5,338 transMapRefSeqV5,338 transMapRnaV5,338 transMapV5,444 10 uniprot,1928 100 augustusGene,134 chainGalGal3,1084 chainGalVar1,1099 chainHg19,1081 chainMm10,1081 chainMm39,1081 chainMonDom4,1081 chainNetGalGal3,1087 chainNetGalVar1,1102 chainNetHg19,1084 chainNetMm10,1083 chainNetMm39,1084 chainNetMonDom4,1084 chainNetOryCun2,1084 chainNetRn6,1087 chainOryCun2,1081 chainRn6,1084 microsat,70 nestedRepeats,230 netGalGal3,1084 netGalVar1,1099 netHg19,1081 netMm10,1081 netMm39,1081 netMonDom4,1081 netOryCun2,1081 netRn6,1084 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainGalVar1,771 chainHg19,753 chainMm10,753 chainMm39,753 chainNetGalVar1,774 chainNetHg19,756 chainNetMm10,755 chainNetMm39,756 chainNetOryCun2,756 chainNetRn6,759 chainOryCun2,753 chainRn6,756 nestedRepeats,238 netGalVar1,771 netHg19,753 netMm10,753 netMm39,753 netOryCun2,753 netRn6,756 1000-2000 augustusGene,161 1000000 transMapEnsemblV5,674 transMapEstV5,643 transMapRefSeqV5,643 transMapRnaV5,643 transMapV5,749 uniprot,1824 103-7 chainGalGal3,1117 chainGalVar1,1132 chainHg19,1114 chainMm10,1114 chainMm39,1114 chainMonDom4,1114 chainNetGalGal3,1120 chainNetGalVar1,1135 chainNetHg19,1117 chainNetMm10,1116 chainNetMm39,1117 chainNetMonDom4,1117 chainNetOryCun2,1117 chainNetRn6,1120 chainOryCun2,1114 chainRn6,1117 netGalGal3,1117 netGalVar1,1132 netHg19,1114 netMm10,1114 netMm39,1114 netMonDom4,1114 netOryCun2,1114 netRn6,1117 10607616 nestedRepeats,394 rmsk,417 10973072 nestedRepeats,361 rmsk,384 11 chainGalGal3,713 chainGalGal3,720 chainGalVar1,728 chainGalVar1,735 chainHg19,710 chainHg19,717 chainMm10,710 chainMm10,717 chainMm39,710 chainMm39,717 chainMonDom4,710 chainMonDom4,717 chainNetGalGal3,716 chainNetGalGal3,723 chainNetGalVar1,731 chainNetGalVar1,738 chainNetHg19,713 chainNetHg19,720 chainNetMm10,712 chainNetMm10,719 chainNetMm39,713 chainNetMm39,720 chainNetMonDom4,713 chainNetMonDom4,720 chainNetOryCun2,713 chainNetOryCun2,720 chainNetRn6,716 chainNetRn6,723 chainOryCun2,710 chainOryCun2,717 chainRn6,713 chainRn6,720 netGalGal3,713 netGalGal3,720 netGalVar1,728 netGalVar1,735 netHg19,710 netHg19,717 netMm10,710 netMm10,717 netMm39,710 netMm39,717 netMonDom4,710 netMonDom4,717 netOryCun2,710 netOryCun2,717 netRn6,713 netRn6,720 tRNAs,409 tRNAs,411 tRNAs,505 1100 chainGalGal3,734 chainGalGal3,746 chainMonDom4,731 chainMonDom4,743 chainNetGalGal3,737 chainNetGalGal3,749 chainNetMonDom4,734 chainNetMonDom4,746 netGalGal3,734 netGalGal3,746 netMonDom4,731 netMonDom4,743 111 chainGalGal3,715 chainGalGal3,721 chainGalVar1,730 chainGalVar1,736 chainHg19,712 chainHg19,718 chainMm10,712 chainMm10,718 chainMm39,712 chainMm39,718 chainMonDom4,712 chainMonDom4,718 chainNetGalGal3,718 chainNetGalGal3,724 chainNetGalVar1,733 chainNetGalVar1,739 chainNetHg19,715 chainNetHg19,721 chainNetMm10,714 chainNetMm10,720 chainNetMm39,715 chainNetMm39,721 chainNetMonDom4,715 chainNetMonDom4,721 chainNetOryCun2,715 chainNetOryCun2,721 chainNetRn6,718 chainNetRn6,724 chainOryCun2,712 chainOryCun2,718 chainRn6,715 chainRn6,721 netGalGal3,715 netGalGal3,721 netGalVar1,730 netGalVar1,736 netHg19,712 netHg19,718 netMm10,712 netMm10,718 netMm39,712 netMm39,718 netMonDom4,712 netMonDom4,718 netOryCun2,712 netOryCun2,718 netRn6,715 netRn6,721 11473003 nscanGene,359 11484-9 chainGalGal3,1086 chainGalVar1,1101 chainHg19,1083 chainMm10,1083 chainMm39,1083 chainMonDom4,1083 chainNetGalGal3,1089 chainNetGalVar1,1104 chainNetHg19,1086 chainNetMm10,1085 chainNetMm39,1086 chainNetMonDom4,1086 chainNetOryCun2,1086 chainNetRn6,1089 chainOryCun2,1083 chainRn6,1086 netGalGal3,1086 netGalVar1,1101 netHg19,1083 netMm10,1083 netMm39,1083 netMonDom4,1083 netOryCun2,1083 netRn6,1086 115-26 chainGalGal3,1048 chainGalVar1,1063 chainHg19,1045 chainMm10,1045 chainMm39,1045 chainMonDom4,1045 chainNetGalGal3,1051 chainNetGalVar1,1066 chainNetHg19,1048 chainNetMm10,1047 chainNetMm39,1048 chainNetMonDom4,1048 chainNetOryCun2,1048 chainNetRn6,1051 chainOryCun2,1045 chainRn6,1048 netGalGal3,1048 netGalVar1,1063 netHg19,1045 netMm10,1045 netMm39,1045 netMonDom4,1045 netOryCun2,1045 netRn6,1048 11752248 ensGene,205 117900 chainGalVar1,752 chainGalVar1,764 chainHg19,734 chainHg19,746 chainMm10,734 chainMm10,746 chainMm39,734 chainMm39,746 chainNetGalVar1,755 chainNetGalVar1,767 chainNetHg19,737 chainNetHg19,749 chainNetMm10,736 chainNetMm10,748 chainNetMm39,737 chainNetMm39,749 chainNetOryCun2,737 chainNetOryCun2,749 chainNetRn6,740 chainNetRn6,752 chainOryCun2,734 chainOryCun2,746 chainRn6,737 chainRn6,749 netGalVar1,752 netGalVar1,764 netHg19,734 netHg19,746 netMm10,734 netMm10,746 netMm39,734 netMm39,746 netOryCun2,734 netOryCun2,746 netRn6,737 netRn6,749 118300 chainGalVar1,776 chainHg19,758 chainMm10,758 chainMm39,758 chainNetGalVar1,779 chainNetHg19,761 chainNetMm10,760 chainNetMm39,761 chainNetOryCun2,761 chainNetRn6,764 chainOryCun2,758 chainRn6,761 netGalVar1,776 netHg19,758 netMm10,758 netMm39,758 netOryCun2,758 netRn6,761 11928468 chainGalGal3,1050 chainGalVar1,1065 chainHg19,1047 chainMm10,1047 chainMm39,1047 chainMonDom4,1047 chainNetGalGal3,1053 chainNetGalVar1,1068 chainNetHg19,1050 chainNetMm10,1049 chainNetMm39,1050 chainNetMonDom4,1050 chainNetOryCun2,1050 chainNetRn6,1053 chainOryCun2,1047 chainRn6,1050 netGalGal3,1050 netGalVar1,1065 netHg19,1047 netMm10,1047 netMm39,1047 netMonDom4,1047 netOryCun2,1047 netRn6,1050 11932250 est,816 intronEst,900 mrna,533 refGene,357 refSeqComposite,1747 xenoMrna,607 xenoRefGene,317 12 est,812 intronEst,896 mrna,529 refGene,353 refSeqComposite,1743 transMapEnsemblV5,751 transMapEnsemblV5,817 transMapEstV5,720 transMapEstV5,786 transMapRefSeqV5,720 transMapRefSeqV5,786 transMapRnaV5,720 transMapRnaV5,786 transMapV5,826 transMapV5,892 xenoMrna,603 xenoRefGene,313 12111 chainGalGal3,723 chainGalVar1,738 chainHg19,720 chainMm10,720 chainMm39,720 chainMonDom4,720 chainNetGalGal3,726 chainNetGalVar1,741 chainNetHg19,723 chainNetMm10,722 chainNetMm39,723 chainNetMonDom4,723 chainNetOryCun2,723 chainNetRn6,726 chainOryCun2,720 chainRn6,723 netGalGal3,723 netGalVar1,738 netHg19,720 netMm10,720 netMm39,720 netMonDom4,720 netOryCun2,720 netRn6,723 1247-56 tRNAs,508 12529312 chainGalGal3,1119 chainGalVar1,1134 chainHg19,1116 chainMm10,1116 chainMm39,1116 chainMonDom4,1116 chainNetGalGal3,1122 chainNetGalVar1,1137 chainNetHg19,1119 chainNetMm10,1118 chainNetMm39,1119 chainNetMonDom4,1119 chainNetOryCun2,1119 chainNetRn6,1122 chainOryCun2,1116 chainRn6,1119 netGalGal3,1119 netGalVar1,1134 netHg19,1116 netMm10,1116 netMm39,1116 netMonDom4,1116 netOryCun2,1116 netRn6,1119 127-163 genscan,206 13 chainGalGal3,1115 chainGalVar1,1130 chainHg19,1112 chainMm10,1112 chainMm39,1112 chainMonDom4,1112 chainNetGalGal3,1118 chainNetGalVar1,1133 chainNetHg19,1115 chainNetMm10,1114 chainNetMm39,1115 chainNetMonDom4,1115 chainNetOryCun2,1115 chainNetRn6,1118 chainOryCun2,1112 chainRn6,1115 netGalGal3,1115 netGalVar1,1130 netHg19,1112 netMm10,1112 netMm39,1112 netMonDom4,1112 netOryCun2,1112 netRn6,1115 nscanGene,286 1300 chainGalVar1,772 chainHg19,754 chainMm10,754 chainMm39,754 chainNetGalVar1,775 chainNetHg19,757 chainNetMm10,756 chainNetMm39,757 chainNetOryCun2,757 chainNetRn6,760 chainOryCun2,754 chainRn6,757 netGalVar1,772 netHg19,754 netMm10,754 netMm39,754 netOryCun2,754 netRn6,757 134-41 windowmaskerSdust,112 1400 chainGalGal3,758 chainMonDom4,755 chainNetGalGal3,761 chainNetMonDom4,758 netGalGal3,758 netMonDom4,755 14500829 nscanGene,334 14500911 chainGalGal3,1088 chainGalVar1,1103 chainHg19,1085 chainMm10,1085 chainMm39,1085 chainMonDom4,1085 chainNetGalGal3,1091 chainNetGalVar1,1106 chainNetHg19,1088 chainNetMm10,1087 chainNetMm39,1088 chainNetMonDom4,1088 chainNetOryCun2,1088 chainNetRn6,1091 chainOryCun2,1085 chainRn6,1088 netGalGal3,1088 netGalVar1,1103 netHg19,1085 netMm10,1085 netMm39,1085 netMonDom4,1085 netOryCun2,1085 netRn6,1088 14534192 augustusGene,340 14681350 est,798 intronEst,882 mrna,515 xenoMrna,589 15 microsat,30 microsat,79 microsat,130 refGene,275 refSeqComposite,1246 simpleRepeat,90 tRNAs,95 windowmaskerSdust,109 xenoRefGene,236 15108278 uniprot,2051 152111 chainGalGal3,726 chainGalVar1,741 chainHg19,723 chainMm10,723 chainMm39,723 chainMonDom4,723 chainNetGalGal3,729 chainNetGalVar1,744 chainNetHg19,726 chainNetMm10,725 chainNetMm39,726 chainNetMonDom4,726 chainNetOryCun2,726 chainNetRn6,729 chainOryCun2,723 chainRn6,726 netGalGal3,726 netGalVar1,741 netHg19,723 netMm10,723 netMm39,723 netMonDom4,723 netOryCun2,723 netRn6,726 15600 chainGalGal3,737 chainGalGal3,749 chainMonDom4,734 chainMonDom4,746 chainNetGalGal3,740 chainNetGalGal3,752 chainNetMonDom4,737 chainNetMonDom4,749 netGalGal3,737 netGalGal3,749 netMonDom4,734 netMonDom4,746 15608248 refGene,433 refSeqComposite,1823 xenoRefGene,393 16 nestedRepeats,357 nscanGene,378 rmsk,380 16000 chainGalGal3,761 chainMonDom4,758 chainNetGalGal3,764 chainNetMonDom4,761 netGalGal3,761 netMonDom4,758 16287941 windowmaskerSdust,114 16597247 nscanGene,290 16651666 nscanGene,382 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 nscanGene,354 transMapEnsemblV5,750 transMapEstV5,719 transMapRefSeqV5,719 transMapRnaV5,719 transMapV5,825 1763-73 transMapEnsemblV5,752 transMapEstV5,721 transMapRefSeqV5,721 transMapRnaV5,721 transMapV5,827 17989246 transMapEnsemblV5,754 transMapEstV5,723 transMapRefSeqV5,723 transMapRnaV5,723 transMapV5,829 18085818 transMapEnsemblV5,820 transMapEstV5,789 transMapRefSeqV5,789 transMapRnaV5,789 transMapV5,895 18218656 augustusGene,315 transMapEnsemblV5,786 transMapEstV5,755 transMapRefSeqV5,755 transMapRnaV5,755 transMapV5,861 1870126 tRNAs,439 18984615 tRNAs,391 19 augustusGene,335 nscanGene,331 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1988 tRNAs,350 1990 blastHg18KG,173 1991 tRNAs,432 1994 tRNAs,407 tRNAs,503 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 genscan,149 genscan,223 tRNAs,460 1998 genscan,167 genscan,204 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainGalGal3,428 chainGalGal3,433 chainGalGal3,718 chainGalVar1,439 chainGalVar1,444 chainGalVar1,733 chainHg19,425 chainHg19,430 chainHg19,715 chainMm10,425 chainMm10,430 chainMm10,715 chainMm39,425 chainMm39,430 chainMm39,715 chainMonDom4,425 chainMonDom4,430 chainMonDom4,715 chainNetGalGal3,431 chainNetGalGal3,436 chainNetGalGal3,721 chainNetGalVar1,442 chainNetGalVar1,447 chainNetGalVar1,736 chainNetHg19,428 chainNetHg19,433 chainNetHg19,718 chainNetMm10,427 chainNetMm10,432 chainNetMm10,717 chainNetMm39,428 chainNetMm39,433 chainNetMm39,718 chainNetMonDom4,428 chainNetMonDom4,433 chainNetMonDom4,718 chainNetOryCun2,428 chainNetOryCun2,433 chainNetOryCun2,718 chainNetRn6,431 chainNetRn6,436 chainNetRn6,721 chainOryCun2,425 chainOryCun2,430 chainOryCun2,715 chainRn6,428 chainRn6,433 chainRn6,718 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netGalGal3,428 netGalGal3,433 netGalGal3,718 netGalVar1,439 netGalVar1,444 netGalVar1,733 netHg19,425 netHg19,430 netHg19,715 netMm10,425 netMm10,430 netMm10,715 netMm39,425 netMm39,430 netMm39,715 netMonDom4,425 netMonDom4,430 netMonDom4,715 netOryCun2,425 netOryCun2,430 netOryCun2,715 netRn6,428 netRn6,433 netRn6,718 nscanGene,287 simpleRepeat,92 uniprot,1121 uniprot,1331 windowmaskerSdust,111 2-3 uniprot,1572 2.0 HLTOGAannotvHg38v1,103 2.1 chainGalGal3,7 chainGalGal3,70 chainGalGal3,311 chainNetGalGal3,8 chainNetGalGal3,73 chainNetGalGal3,314 chainNetGalGal3Viewchain,6 chainNetGalGal3Viewnet,6 netGalGal3,7 netGalGal3,70 netGalGal3,311 20 chainGalGal3,1085 chainGalVar1,1100 chainHg19,1082 chainMm10,1082 chainMm39,1082 chainMonDom4,1082 chainNetGalGal3,1088 chainNetGalVar1,1103 chainNetHg19,1085 chainNetMm10,1084 chainNetMm39,1085 chainNetMonDom4,1085 chainNetOryCun2,1085 chainNetRn6,1088 chainOryCun2,1082 chainRn6,1085 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netGalGal3,1085 netGalVar1,1100 netHg19,1082 netMm10,1082 netMm39,1082 netMonDom4,1082 netOryCun2,1082 netRn6,1085 tRNAs,123 transMapEnsemblV5,377 transMapEstV5,346 transMapRefSeqV5,346 transMapRnaV5,346 transMapV5,452 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2001 nscanGene,353 2002 chainGalGal3,1047 chainGalVar1,1062 chainHg19,1044 chainMm10,1044 chainMm39,1044 chainMonDom4,1044 chainNetGalGal3,1050 chainNetGalVar1,1065 chainNetHg19,1047 chainNetMm10,1046 chainNetMm39,1047 chainNetMonDom4,1047 chainNetOryCun2,1047 chainNetRn6,1050 chainOryCun2,1044 chainRn6,1047 ensGene,47 ensGene,198 est,810 intronEst,894 mrna,527 netGalGal3,1047 netGalVar1,1062 netHg19,1044 netMm10,1044 netMm39,1044 netMonDom4,1044 netOryCun2,1044 netRn6,1047 refGene,351 refSeqComposite,1741 xenoMrna,601 xenoRefGene,311 2003 augustusGene,333 chainGalGal3,1081 chainGalGal3,1113 chainGalVar1,1096 chainGalVar1,1128 chainHg19,1078 chainHg19,1110 chainMm10,1078 chainMm10,1110 chainMm39,1078 chainMm39,1110 chainMonDom4,1078 chainMonDom4,1110 chainNetGalGal3,1084 chainNetGalGal3,1116 chainNetGalVar1,1099 chainNetGalVar1,1131 chainNetHg19,1081 chainNetHg19,1113 chainNetMm10,1080 chainNetMm10,1112 chainNetMm39,1081 chainNetMm39,1113 chainNetMonDom4,1081 chainNetMonDom4,1113 chainNetOryCun2,1081 chainNetOryCun2,1113 chainNetRn6,1084 chainNetRn6,1116 chainOryCun2,1078 chainOryCun2,1110 chainRn6,1081 chainRn6,1113 netGalGal3,1081 netGalGal3,1113 netGalVar1,1096 netGalVar1,1128 netHg19,1078 netHg19,1110 netMm10,1078 netMm10,1110 netMm39,1078 netMm39,1110 netMonDom4,1078 netMonDom4,1110 netOryCun2,1078 netOryCun2,1110 netRn6,1081 netRn6,1113 nscanGene,327 2004 est,790 intronEst,874 mrna,507 uniprot,2045 xenoMrna,581 2005 refGene,425 refSeqComposite,1815 xenoRefGene,385 2006 chainGalGal3,5 chainGalGal3,68 chainGalGal3,309 chainMonDom4,5 chainMonDom4,67 chainMonDom4,307 chainNetGalGal3,6 chainNetGalGal3,71 chainNetGalGal3,312 chainNetGalGal3Viewchain,4 chainNetGalGal3Viewnet,4 chainNetMonDom4,6 chainNetMonDom4,70 chainNetMonDom4,310 chainNetMonDom4Viewchain,4 chainNetMonDom4Viewnet,4 netGalGal3,5 netGalGal3,68 netGalGal3,309 netMonDom4,5 netMonDom4,67 netMonDom4,307 nscanGene,284 nscanGene,376 windowmaskerSdust,107 2007 chainGalGal3,1020 chainGalVar1,1035 chainHg19,1017 chainMm10,1017 chainMm39,1017 chainMonDom4,1017 chainNetGalGal3,1023 chainNetGalVar1,1038 chainNetHg19,1020 chainNetMm10,1019 chainNetMm39,1020 chainNetMonDom4,1020 chainNetOryCun2,1020 chainNetRn6,1023 chainOryCun2,1017 chainRn6,1020 netGalGal3,1020 netGalVar1,1035 netHg19,1017 netMm10,1017 netMm39,1017 netMonDom4,1017 netOryCun2,1017 netRn6,1020 transMapEnsemblV5,748 transMapEnsemblV5,814 transMapEstV5,717 transMapEstV5,783 transMapRefSeqV5,717 transMapRefSeqV5,783 transMapRnaV5,717 transMapRnaV5,783 transMapV5,823 transMapV5,889 2008 augustusGene,308 transMapEnsemblV5,779 transMapEstV5,748 transMapRefSeqV5,748 transMapRnaV5,748 transMapV5,854 2009 chainHg19,5 chainHg19,67 chainHg19,307 chainNetHg19,6 chainNetHg19,70 chainNetHg19,310 chainNetHg19Viewchain,4 chainNetHg19Viewnet,4 chainNetOryCun2,6 chainNetOryCun2,70 chainNetOryCun2,310 chainNetOryCun2Viewchain,4 chainNetOryCun2Viewnet,4 chainOryCun2,5 chainOryCun2,67 chainOryCun2,307 netHg19,5 netHg19,67 netHg19,307 netOryCun2,5 netOryCun2,67 netOryCun2,307 tRNAs,384 2011 chainMm10,5 chainMm10,67 chainMm10,307 chainNetMm10,5 chainNetMm10,69 chainNetMm10,309 chainNetMm10Viewchain,4 chainNetMm10Viewnet,4 netMm10,5 netMm10,67 netMm10,307 2012 uniprot,2000 2013 est,765 intronEst,849 mrna,482 xenoMrna,556 2014 chainGalVar1,9 chainGalVar1,73 chainGalVar1,321 chainNetGalVar1,10 chainNetGalVar1,76 chainNetGalVar1,324 chainNetGalVar1Viewchain,6 chainNetGalVar1Viewnet,6 chainNetRn6,6 chainNetRn6,71 chainNetRn6,312 chainNetRn6Viewchain,4 chainNetRn6Viewnet,4 chainRn6,5 chainRn6,68 chainRn6,309 netGalVar1,9 netGalVar1,73 netGalVar1,321 netRn6,5 netRn6,68 netRn6,309 refGene,392 refSeqComposite,1782 xenoRefGene,352 2020 chainMm39,5 chainMm39,67 chainMm39,307 chainNetMm39,6 chainNetMm39,70 chainNetMm39,310 chainNetMm39Viewchain,4 chainNetMm39Viewnet,4 netMm39,5 netMm39,67 netMm39,307 2022_03 uniprot,1911 2023 HLTOGAannotvHg38v1,365 uniprot,1191 2079-88 tRNAs,412 2111 chainGalGal3,722 chainGalVar1,737 chainHg19,719 chainMm10,719 chainMm39,719 chainMonDom4,719 chainNetGalGal3,725 chainNetGalVar1,740 chainNetHg19,722 chainNetMm10,721 chainNetMm39,722 chainNetMonDom4,722 chainNetOryCun2,722 chainNetRn6,725 chainOryCun2,719 chainRn6,722 netGalGal3,722 netGalVar1,737 netHg19,719 netMm10,719 netMm39,719 netMonDom4,719 netOryCun2,719 netRn6,722 215 blastHg18KG,176 217900 chainGalVar1,753 chainGalVar1,765 chainHg19,735 chainHg19,747 chainMm10,735 chainMm10,747 chainMm39,735 chainMm39,747 chainNetGalVar1,756 chainNetGalVar1,768 chainNetHg19,738 chainNetHg19,750 chainNetMm10,737 chainNetMm10,749 chainNetMm39,738 chainNetMm39,750 chainNetOryCun2,738 chainNetOryCun2,750 chainNetRn6,741 chainNetRn6,753 chainOryCun2,735 chainOryCun2,747 chainRn6,738 chainRn6,750 netGalVar1,753 netGalVar1,765 netHg19,735 netHg19,747 netMm10,735 netMm10,747 netMm39,735 netMm39,747 netOryCun2,735 netOryCun2,747 netRn6,738 netRn6,750 218300 chainGalVar1,777 chainHg19,759 chainMm10,759 chainMm39,759 chainNetGalVar1,780 chainNetHg19,762 chainNetMm10,761 chainNetMm39,762 chainNetOryCun2,762 chainNetRn6,765 chainOryCun2,759 chainRn6,762 netGalVar1,777 netHg19,759 netMm10,759 netMm39,759 netOryCun2,759 netRn6,762 22 tRNAs,410 tRNAs,506 windowmaskerSdust,110 220 tRNAs,435 22102590 uniprot,2007 225 transMapEnsemblV5,719 transMapEstV5,688 transMapRefSeqV5,688 transMapRnaV5,688 transMapV5,794 22900 chainGalVar1,750 chainGalVar1,762 chainHg19,732 chainHg19,744 chainMm10,732 chainMm10,744 chainMm39,732 chainMm39,744 chainNetGalVar1,753 chainNetGalVar1,765 chainNetHg19,735 chainNetHg19,747 chainNetMm10,734 chainNetMm10,746 chainNetMm39,735 chainNetMm39,747 chainNetOryCun2,735 chainNetOryCun2,747 chainNetRn6,738 chainNetRn6,750 chainOryCun2,732 chainOryCun2,744 chainRn6,735 chainRn6,747 netGalVar1,750 netGalVar1,762 netHg19,732 netHg19,744 netMm10,732 netMm10,744 netMm39,732 netMm39,744 netOryCun2,732 netOryCun2,744 netRn6,735 netRn6,747 23 uniprot,2047 23193287 est,772 intronEst,856 mrna,489 xenoMrna,563 23300 chainGalVar1,774 chainHg19,756 chainMm10,756 chainMm39,756 chainNetGalVar1,777 chainNetHg19,759 chainNetMm10,758 chainNetMm39,759 chainNetOryCun2,759 chainNetRn6,762 chainOryCun2,756 chainRn6,759 netGalVar1,774 netHg19,756 netMm10,756 netMm39,756 netOryCun2,756 netRn6,759 24 augustusGene,311 transMapEnsemblV5,782 transMapEstV5,751 transMapRefSeqV5,751 transMapRnaV5,751 transMapV5,857 24259432 refGene,399 refSeqComposite,1789 xenoRefGene,359 25 genscan,225 tRNAs,463 transMapV5,113 xenoMrna,506 xenoRefGene,271 252111 chainGalGal3,727 chainGalVar1,742 chainHg19,724 chainMm10,724 chainMm39,724 chainMonDom4,724 chainNetGalGal3,730 chainNetGalVar1,745 chainNetHg19,727 chainNetMm10,726 chainNetMm39,727 chainNetMonDom4,727 chainNetOryCun2,727 chainNetRn6,730 chainOryCun2,724 chainRn6,727 netGalGal3,727 netGalVar1,742 netHg19,724 netMm10,724 netMm39,724 netMonDom4,724 netOryCun2,724 netRn6,727 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 268 genscan,226 27 microsat,131 simpleRepeat,91 28 HLTOGAannotvHg38v1,367 2900 chainGalVar1,749 chainGalVar1,761 chainHg19,731 chainHg19,743 chainMm10,731 chainMm10,743 chainMm39,731 chainMm39,743 chainNetGalVar1,752 chainNetGalVar1,764 chainNetHg19,734 chainNetHg19,746 chainNetMm10,733 chainNetMm10,745 chainNetMm39,734 chainNetMm39,746 chainNetOryCun2,734 chainNetOryCun2,746 chainNetRn6,737 chainNetRn6,749 chainOryCun2,731 chainOryCun2,743 chainRn6,734 chainRn6,746 netGalVar1,749 netGalVar1,761 netHg19,731 netHg19,743 netMm10,731 netMm10,743 netMm39,731 netMm39,743 netOryCun2,731 netOryCun2,743 netRn6,734 netRn6,746 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 blastHg18KG,177 chainGalGal3,440 chainGalGal3,719 chainGalVar1,451 chainGalVar1,734 chainHg19,437 chainHg19,716 chainMm10,437 chainMm10,716 chainMm39,437 chainMm39,716 chainMonDom4,437 chainMonDom4,716 chainNetGalGal3,443 chainNetGalGal3,722 chainNetGalVar1,454 chainNetGalVar1,737 chainNetHg19,440 chainNetHg19,719 chainNetMm10,439 chainNetMm10,718 chainNetMm39,440 chainNetMm39,719 chainNetMonDom4,440 chainNetMonDom4,719 chainNetOryCun2,440 chainNetOryCun2,719 chainNetRn6,443 chainNetRn6,722 chainOryCun2,437 chainOryCun2,716 chainRn6,440 chainRn6,719 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 est,481 est,534 est,588 intronEst,114 intronEst,562 intronEst,615 intronEst,669 microsat,68 netGalGal3,440 netGalGal3,719 netGalVar1,451 netGalVar1,734 netHg19,437 netHg19,716 netMm10,437 netMm10,716 netMm39,437 netMm39,716 netMonDom4,437 netMonDom4,716 netOryCun2,437 netOryCun2,716 netRn6,440 netRn6,719 tRNAs,436 transMapEnsemblV5,816 transMapEstV5,785 transMapRefSeqV5,785 transMapRnaV5,785 transMapV5,891 uniprot,1123 uniprot,1194 xenoMrna,90 3.1 augustusGene,24 30 chainGalGal3,1083 chainGalVar1,1098 chainHg19,1080 chainMm10,1080 chainMm39,1080 chainMonDom4,1080 chainNetGalGal3,1086 chainNetGalVar1,1101 chainNetHg19,1083 chainNetMm10,1082 chainNetMm39,1083 chainNetMonDom4,1083 chainNetOryCun2,1083 chainNetRn6,1086 chainOryCun2,1080 chainRn6,1083 ensGene,201 netGalGal3,1083 netGalVar1,1098 netHg19,1080 netMm10,1080 netMm39,1080 netMonDom4,1080 netOryCun2,1080 netRn6,1083 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainGalVar1,706 chainHg19,688 chainMm10,688 chainMm39,688 chainNetGalVar1,709 chainNetHg19,691 chainNetMm10,690 chainNetMm39,691 chainNetOryCun2,691 chainNetRn6,694 chainOryCun2,688 chainRn6,691 netGalVar1,706 netHg19,688 netMm10,688 netMm39,688 netOryCun2,688 netRn6,691 31 nscanGene,330 31600 chainGalGal3,738 chainGalGal3,750 chainMonDom4,735 chainMonDom4,747 chainNetGalGal3,741 chainNetGalGal3,753 chainNetMonDom4,738 chainNetMonDom4,750 netGalGal3,738 netGalGal3,750 netMonDom4,735 netMonDom4,747 317900 chainGalVar1,754 chainGalVar1,766 chainHg19,736 chainHg19,748 chainMm10,736 chainMm10,748 chainMm39,736 chainMm39,748 chainNetGalVar1,757 chainNetGalVar1,769 chainNetHg19,739 chainNetHg19,751 chainNetMm10,738 chainNetMm10,750 chainNetMm39,739 chainNetMm39,751 chainNetOryCun2,739 chainNetOryCun2,751 chainNetRn6,742 chainNetRn6,754 chainOryCun2,736 chainOryCun2,748 chainRn6,739 chainRn6,751 netGalVar1,754 netGalVar1,766 netHg19,736 netHg19,748 netMm10,736 netMm10,748 netMm39,736 netMm39,748 netOryCun2,736 netOryCun2,748 netRn6,739 netRn6,751 318300 chainGalVar1,778 chainHg19,760 chainMm10,760 chainMm39,760 chainNetGalVar1,781 chainNetHg19,763 chainNetMm10,762 chainNetMm39,763 chainNetOryCun2,763 chainNetRn6,766 chainOryCun2,760 chainRn6,763 netGalVar1,778 netHg19,760 netMm10,760 netMm39,760 netOryCun2,760 netRn6,763 32 est,793 intronEst,84 intronEst,877 mrna,510 xenoMrna,584 32000 chainGalGal3,762 chainMonDom4,759 chainNetGalGal3,765 chainNetMonDom4,762 netGalGal3,762 netMonDom4,759 32111 chainGalGal3,724 chainGalVar1,739 chainHg19,721 chainMm10,721 chainMm39,721 chainMonDom4,721 chainNetGalGal3,727 chainNetGalVar1,742 chainNetHg19,724 chainNetMm10,723 chainNetMm39,724 chainNetMonDom4,724 chainNetOryCun2,724 chainNetRn6,727 chainOryCun2,721 chainRn6,724 netGalGal3,724 netGalVar1,739 netHg19,721 netMm10,721 netMm39,721 netMonDom4,721 netOryCun2,721 netRn6,724 325 chainGalGal3,729 chainGalGal3,741 chainMonDom4,726 chainMonDom4,738 chainNetGalGal3,732 chainNetGalGal3,744 chainNetMonDom4,729 chainNetMonDom4,741 netGalGal3,729 netGalGal3,741 netMonDom4,726 netMonDom4,738 33 refGene,428 refSeqComposite,1818 xenoRefGene,388 3300 chainGalVar1,773 chainHg19,755 chainMm10,755 chainMm39,755 chainNetGalVar1,776 chainNetHg19,758 chainNetMm10,757 chainNetMm39,758 chainNetOryCun2,758 chainNetRn6,761 chainOryCun2,755 chainRn6,758 netGalVar1,773 netHg19,755 netMm10,755 netMm39,755 netOryCun2,755 netRn6,758 34990190 refSeqComposite,1560 350 chainGalVar1,744 chainGalVar1,756 chainHg19,726 chainHg19,738 chainMm10,726 chainMm10,738 chainMm39,726 chainMm39,738 chainNetGalVar1,747 chainNetGalVar1,759 chainNetHg19,729 chainNetHg19,741 chainNetMm10,728 chainNetMm10,740 chainNetMm39,729 chainNetMm39,741 chainNetOryCun2,729 chainNetOryCun2,741 chainNetRn6,732 chainNetRn6,744 chainOryCun2,726 chainOryCun2,738 chainRn6,729 chainRn6,741 netGalVar1,744 netGalVar1,756 netHg19,726 netHg19,738 netMm10,726 netMm10,738 netMm39,726 netMm39,738 netOryCun2,726 netOryCun2,738 netRn6,729 netRn6,741 360 chainGalGal3,730 chainGalGal3,742 chainMonDom4,727 chainMonDom4,739 chainNetGalGal3,733 chainNetGalGal3,745 chainNetMonDom4,730 chainNetMonDom4,742 netGalGal3,730 netGalGal3,742 netMonDom4,727 netMonDom4,739 3600 chainGalGal3,735 chainGalGal3,747 chainMonDom4,732 chainMonDom4,744 chainNetGalGal3,738 chainNetGalGal3,750 chainNetMonDom4,735 chainNetMonDom4,747 netGalGal3,735 netGalGal3,747 netMonDom4,732 netMonDom4,744 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 36727467 refSeqComposite,1562 37 tRNAs,386 37104600 HLTOGAannotvHg38v1,372 379-93 nscanGene,288 38-41 ensGene,203 380 HLTOGAannotvHg38v1,368 39s ensGene,163 4 est,813 intronEst,897 mrna,530 refGene,354 refSeqComposite,1744 xenoMrna,604 xenoRefGene,314 40 uniprot,2002 400 chainGalGal3,731 chainGalGal3,743 chainMonDom4,728 chainMonDom4,740 chainNetGalGal3,734 chainNetGalGal3,746 chainNetMonDom4,731 chainNetMonDom4,743 netGalGal3,731 netGalGal3,743 netMonDom4,728 netMonDom4,740 transMapV5,109 4000 chainGalGal3,759 chainMonDom4,756 chainNetGalGal3,762 chainNetMonDom4,759 netGalGal3,759 netMonDom4,756 403-410 blastHg18KG,178 41 est,767 intronEst,851 mrna,484 xenoMrna,558 418-420 nestedRepeats,359 rmsk,382 42 refGene,394 refSeqComposite,1784 xenoRefGene,354 425 chainGalVar1,745 chainGalVar1,757 chainHg19,727 chainHg19,739 chainMm10,727 chainMm10,739 chainMm39,727 chainMm39,739 chainNetGalVar1,748 chainNetGalVar1,760 chainNetHg19,730 chainNetHg19,742 chainNetMm10,729 chainNetMm10,741 chainNetMm39,730 chainNetMm39,742 chainNetOryCun2,730 chainNetOryCun2,742 chainNetRn6,733 chainNetRn6,745 chainOryCun2,727 chainOryCun2,739 chainRn6,730 chainRn6,742 netGalVar1,745 netGalVar1,757 netHg19,727 netHg19,739 netMm10,727 netMm10,739 netMm39,727 netMm39,739 netOryCun2,727 netOryCun2,739 netRn6,730 netRn6,742 45 refSeqComposite,945 tRNAs,180 45-60 tRNAs,200 450 chainGalGal3,732 chainGalGal3,744 chainGalVar1,746 chainGalVar1,758 chainHg19,728 chainHg19,740 chainMm10,728 chainMm10,740 chainMm39,728 chainMm39,740 chainMonDom4,729 chainMonDom4,741 chainNetGalGal3,735 chainNetGalGal3,747 chainNetGalVar1,749 chainNetGalVar1,761 chainNetHg19,731 chainNetHg19,743 chainNetMm10,730 chainNetMm10,742 chainNetMm39,731 chainNetMm39,743 chainNetMonDom4,732 chainNetMonDom4,744 chainNetOryCun2,731 chainNetOryCun2,743 chainNetRn6,734 chainNetRn6,746 chainOryCun2,728 chainOryCun2,740 chainRn6,731 chainRn6,743 netGalGal3,732 netGalGal3,744 netGalVar1,746 netGalVar1,758 netHg19,728 netHg19,740 netMm10,728 netMm10,740 netMm39,728 netMm39,740 netMonDom4,729 netMonDom4,741 netOryCun2,728 netOryCun2,740 netRn6,731 netRn6,743 464-70 uniprot,2049 5 augustusGene,312 blastHg18KG,175 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 est,478 est,519 est,545 intronEst,559 intronEst,600 intronEst,626 nscanGene,379 tRNAs,434 tRNAs,464 transMapEnsemblV5,9 transMapEnsemblV5,783 transMapEstV5,7 transMapEstV5,752 transMapRefSeqV5,8 transMapRefSeqV5,752 transMapRnaV5,8 transMapRnaV5,752 transMapV5,6 transMapV5,858 uniprot,2048 xenoMrna,88 5-base gc5Base,6 gc5Base,27 50 HLTOGAannotvHg38v1,167 HLTOGAannotvHg38v1,214 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 est,35 intronEst,46 5000 chainGalGal3,691 chainMonDom4,688 chainNetGalGal3,694 chainNetMonDom4,691 netGalGal3,691 netMonDom4,688 5654-66 nscanGene,332 56600 chainGalGal3,739 chainGalGal3,751 chainMonDom4,736 chainMonDom4,748 chainNetGalGal3,742 chainNetGalGal3,754 chainNetMonDom4,739 chainNetMonDom4,751 netGalGal3,739 netGalGal3,751 netMonDom4,736 netMonDom4,748 57000 chainGalGal3,763 chainMonDom4,760 chainNetGalGal3,766 chainNetMonDom4,763 netGalGal3,763 netMonDom4,760 573-80 microsat,133 simpleRepeat,93 57900 chainGalVar1,751 chainGalVar1,763 chainHg19,733 chainHg19,745 chainMm10,733 chainMm10,745 chainMm39,733 chainMm39,745 chainNetGalVar1,754 chainNetGalVar1,766 chainNetHg19,736 chainNetHg19,748 chainNetMm10,735 chainNetMm10,747 chainNetMm39,736 chainNetMm39,748 chainNetOryCun2,736 chainNetOryCun2,748 chainNetRn6,739 chainNetRn6,751 chainOryCun2,733 chainOryCun2,745 chainRn6,736 chainRn6,748 netGalVar1,751 netGalVar1,763 netHg19,733 netHg19,745 netMm10,733 netMm10,745 netMm39,733 netMm39,745 netOryCun2,733 netOryCun2,745 netRn6,736 netRn6,748 58300 chainGalVar1,775 chainHg19,757 chainMm10,757 chainMm39,757 chainNetGalVar1,778 chainNetHg19,760 chainNetMm10,759 chainNetMm39,760 chainNetOryCun2,760 chainNetRn6,763 chainOryCun2,757 chainRn6,760 netGalVar1,775 netHg19,757 netMm10,757 netMm39,757 netOryCun2,757 netRn6,760 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 6.0 chainNetRn6,8 chainNetRn6,73 chainNetRn6,314 chainNetRn6Viewchain,6 chainNetRn6Viewnet,6 chainRn6,7 chainRn6,70 chainRn6,311 netRn6,7 netRn6,70 netRn6,311 60 blastHg18KG,109 blastHg18KG,121 blastHg18KG,129 60.0 tRNAs,166 600 chainGalGal3,733 chainGalGal3,745 chainGalVar1,747 chainGalVar1,759 chainHg19,729 chainHg19,741 chainMm10,729 chainMm10,741 chainMm39,729 chainMm39,741 chainMonDom4,730 chainMonDom4,742 chainNetGalGal3,736 chainNetGalGal3,748 chainNetGalVar1,750 chainNetGalVar1,762 chainNetHg19,732 chainNetHg19,744 chainNetMm10,731 chainNetMm10,743 chainNetMm39,732 chainNetMm39,744 chainNetMonDom4,733 chainNetMonDom4,745 chainNetOryCun2,732 chainNetOryCun2,744 chainNetRn6,735 chainNetRn6,747 chainOryCun2,729 chainOryCun2,741 chainRn6,732 chainRn6,744 netGalGal3,733 netGalGal3,745 netGalVar1,747 netGalVar1,759 netHg19,729 netHg19,741 netMm10,729 netMm10,741 netMm39,729 netMm39,741 netMonDom4,730 netMonDom4,742 netOryCun2,729 netOryCun2,741 netRn6,732 netRn6,744 625 chainGalGal3,753 chainMonDom4,750 chainNetGalGal3,756 chainNetMonDom4,753 netGalGal3,753 netMonDom4,750 637-44 augustusGene,313 transMapEnsemblV5,784 transMapEstV5,753 transMapRefSeqV5,753 transMapRnaV5,753 transMapV5,859 656-64 est,814 intronEst,898 mrna,531 refGene,355 refSeqComposite,1745 xenoMrna,605 xenoRefGene,315 657-63 nestedRepeats,392 rmsk,415 659-71 tRNAs,437 660 chainGalGal3,754 chainMonDom4,751 chainNetGalGal3,757 chainNetMonDom4,754 netGalGal3,754 netMonDom4,751 6643 HLTOGAannotvHg38v1,369 678-85 nscanGene,380 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 tRNAs,507 700 chainGalGal3,755 chainMonDom4,752 chainNetGalGal3,758 chainNetMonDom4,755 netGalGal3,755 netMonDom4,752 72111 chainGalGal3,725 chainGalVar1,740 chainHg19,722 chainMm10,722 chainMm39,722 chainMonDom4,722 chainNetGalGal3,728 chainNetGalVar1,743 chainNetHg19,725 chainNetMm10,724 chainNetMm39,725 chainNetMonDom4,725 chainNetOryCun2,725 chainNetRn6,728 chainOryCun2,722 chainRn6,725 netGalGal3,725 netGalVar1,740 netHg19,722 netMm10,722 netMm39,722 netMonDom4,722 netOryCun2,722 netRn6,725 743-8 nestedRepeats,414 rmsk,437 750 chainGalGal3,756 chainGalVar1,768 chainHg19,750 chainMm10,750 chainMm39,750 chainMonDom4,753 chainNetGalGal3,759 chainNetGalVar1,771 chainNetHg19,753 chainNetMm10,752 chainNetMm39,753 chainNetMonDom4,756 chainNetOryCun2,753 chainNetRn6,756 chainOryCun2,750 chainRn6,753 est,668 intronEst,749 netGalGal3,756 netGalVar1,768 netHg19,750 netMm10,750 netMm39,750 netMonDom4,753 netOryCun2,750 netRn6,753 7600 chainGalGal3,736 chainGalGal3,748 chainMonDom4,733 chainMonDom4,745 chainNetGalGal3,739 chainNetGalGal3,751 chainNetMonDom4,736 chainNetMonDom4,748 netGalGal3,736 netGalGal3,748 netMonDom4,733 netMonDom4,745 78-94 genscan,228 80 HLTOGAannotvHg38v1,145 HLTOGAannotvHg38v1,179 HLTOGAannotvHg38v1,226 HLTOGAannotvHg38v1,245 8000 chainGalGal3,760 chainMonDom4,757 chainNetGalGal3,763 chainNetMonDom4,760 netGalGal3,760 netMonDom4,757 8029015 tRNAs,414 8165140 tRNAs,510 825 chainGalVar1,769 chainHg19,751 chainMm10,751 chainMm39,751 chainNetGalVar1,772 chainNetHg19,754 chainNetMm10,753 chainNetMm39,754 chainNetOryCun2,754 chainNetRn6,757 chainOryCun2,751 chainRn6,754 netGalVar1,769 netHg19,751 netMm10,751 netMm39,751 netOryCun2,751 netRn6,754 850 chainGalVar1,770 chainHg19,752 chainMm10,752 chainMm39,752 chainNetGalVar1,773 chainNetHg19,755 chainNetMm10,754 chainNetMm39,755 chainNetOryCun2,755 chainNetRn6,758 chainOryCun2,752 chainRn6,755 netGalVar1,770 netHg19,752 netMm10,752 netMm39,752 netOryCun2,752 netRn6,755 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainGalGal3,757 chainGalVar1,748 chainGalVar1,760 chainHg19,730 chainHg19,742 chainMm10,730 chainMm10,742 chainMm39,730 chainMm39,742 chainMonDom4,754 chainNetGalGal3,760 chainNetGalVar1,751 chainNetGalVar1,763 chainNetHg19,733 chainNetHg19,745 chainNetMm10,732 chainNetMm10,744 chainNetMm39,733 chainNetMm39,745 chainNetMonDom4,757 chainNetOryCun2,733 chainNetOryCun2,745 chainNetRn6,736 chainNetRn6,748 chainOryCun2,730 chainOryCun2,742 chainRn6,733 chainRn6,745 netGalGal3,757 netGalVar1,748 netGalVar1,760 netHg19,730 netHg19,742 netMm10,730 netMm10,742 netMm39,730 netMm39,742 netMonDom4,754 netOryCun2,730 netOryCun2,742 netRn6,733 netRn6,745 9023104 tRNAs,467 9149143 genscan,230 93 uniprot,1483 955-64 tRNAs,465 96 est,716 intronEst,797 mrna,432 refGene,310 refSeqComposite,1281 9862982 microsat,135 simpleRepeat,95 99-100 tRNAs,81 _alt uniprot,1419 _fix uniprot,1421 a HLTOGAannotvHg38v1,25 HLTOGAannotvHg38v1,46 HLTOGAannotvHg38v1,50 HLTOGAannotvHg38v1,62 HLTOGAannotvHg38v1,74 HLTOGAannotvHg38v1,116 HLTOGAannotvHg38v1,138 HLTOGAannotvHg38v1,268 HLTOGAannotvHg38v1,291 HLTOGAannotvHg38v1,296 augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainGalGal3,78 chainGalGal3,148 chainGalGal3,201 chainGalGal3,460 chainGalGal3,470 chainGalGal3,474 chainGalGal3,541 chainGalGal3,558 chainGalGal3,561 chainGalGal3,628 chainGalGal3,633 chainGalGal3,639 chainGalGal3,643 chainGalGal3,654 chainGalGal3,686 chainGalGal3,805 chainGalGal3,819 chainGalGal3,825 chainGalGal3,831 chainGalGal3,835 chainGalGal3,838 chainGalGal3,866 chainGalGal3,1056 chainGalGal3,1080 chainGalGal3,1096 chainGalVar1,82 chainGalVar1,154 chainGalVar1,209 chainGalVar1,471 chainGalVar1,481 chainGalVar1,485 chainGalVar1,552 chainGalVar1,569 chainGalVar1,572 chainGalVar1,641 chainGalVar1,648 chainGalVar1,654 chainGalVar1,658 chainGalVar1,669 chainGalVar1,701 chainGalVar1,820 chainGalVar1,834 chainGalVar1,840 chainGalVar1,846 chainGalVar1,850 chainGalVar1,853 chainGalVar1,881 chainGalVar1,1071 chainGalVar1,1095 chainGalVar1,1111 chainHg19,76 chainHg19,146 chainHg19,199 chainHg19,457 chainHg19,467 chainHg19,471 chainHg19,538 chainHg19,555 chainHg19,558 chainHg19,625 chainHg19,630 chainHg19,636 chainHg19,640 chainHg19,651 chainHg19,683 chainHg19,802 chainHg19,816 chainHg19,822 chainHg19,828 chainHg19,832 chainHg19,835 chainHg19,863 chainHg19,1053 chainHg19,1077 chainHg19,1093 chainMm10,76 chainMm10,146 chainMm10,199 chainMm10,457 chainMm10,467 chainMm10,471 chainMm10,538 chainMm10,555 chainMm10,558 chainMm10,625 chainMm10,630 chainMm10,636 chainMm10,640 chainMm10,651 chainMm10,683 chainMm10,802 chainMm10,816 chainMm10,822 chainMm10,828 chainMm10,832 chainMm10,835 chainMm10,863 chainMm10,1053 chainMm10,1077 chainMm10,1093 chainMm39,76 chainMm39,146 chainMm39,199 chainMm39,457 chainMm39,467 chainMm39,471 chainMm39,538 chainMm39,555 chainMm39,558 chainMm39,625 chainMm39,630 chainMm39,636 chainMm39,640 chainMm39,651 chainMm39,683 chainMm39,802 chainMm39,816 chainMm39,822 chainMm39,828 chainMm39,832 chainMm39,835 chainMm39,863 chainMm39,1053 chainMm39,1077 chainMm39,1093 chainMonDom4,76 chainMonDom4,146 chainMonDom4,199 chainMonDom4,457 chainMonDom4,467 chainMonDom4,471 chainMonDom4,538 chainMonDom4,555 chainMonDom4,558 chainMonDom4,625 chainMonDom4,630 chainMonDom4,636 chainMonDom4,640 chainMonDom4,651 chainMonDom4,683 chainMonDom4,802 chainMonDom4,816 chainMonDom4,822 chainMonDom4,828 chainMonDom4,832 chainMonDom4,835 chainMonDom4,863 chainMonDom4,1053 chainMonDom4,1077 chainMonDom4,1093 chainNetGalGal3,81 chainNetGalGal3,151 chainNetGalGal3,204 chainNetGalGal3,463 chainNetGalGal3,473 chainNetGalGal3,477 chainNetGalGal3,544 chainNetGalGal3,561 chainNetGalGal3,564 chainNetGalGal3,631 chainNetGalGal3,636 chainNetGalGal3,642 chainNetGalGal3,646 chainNetGalGal3,657 chainNetGalGal3,689 chainNetGalGal3,808 chainNetGalGal3,822 chainNetGalGal3,828 chainNetGalGal3,834 chainNetGalGal3,838 chainNetGalGal3,841 chainNetGalGal3,869 chainNetGalGal3,1059 chainNetGalGal3,1083 chainNetGalGal3,1099 chainNetGalVar1,85 chainNetGalVar1,157 chainNetGalVar1,212 chainNetGalVar1,474 chainNetGalVar1,484 chainNetGalVar1,488 chainNetGalVar1,555 chainNetGalVar1,572 chainNetGalVar1,575 chainNetGalVar1,644 chainNetGalVar1,651 chainNetGalVar1,657 chainNetGalVar1,661 chainNetGalVar1,672 chainNetGalVar1,704 chainNetGalVar1,823 chainNetGalVar1,837 chainNetGalVar1,843 chainNetGalVar1,849 chainNetGalVar1,853 chainNetGalVar1,856 chainNetGalVar1,884 chainNetGalVar1,1074 chainNetGalVar1,1098 chainNetGalVar1,1114 chainNetHg19,79 chainNetHg19,149 chainNetHg19,202 chainNetHg19,460 chainNetHg19,470 chainNetHg19,474 chainNetHg19,541 chainNetHg19,558 chainNetHg19,561 chainNetHg19,628 chainNetHg19,633 chainNetHg19,639 chainNetHg19,643 chainNetHg19,654 chainNetHg19,686 chainNetHg19,805 chainNetHg19,819 chainNetHg19,825 chainNetHg19,831 chainNetHg19,835 chainNetHg19,838 chainNetHg19,866 chainNetHg19,1056 chainNetHg19,1080 chainNetHg19,1096 chainNetMm10,78 chainNetMm10,148 chainNetMm10,201 chainNetMm10,459 chainNetMm10,469 chainNetMm10,473 chainNetMm10,540 chainNetMm10,557 chainNetMm10,560 chainNetMm10,627 chainNetMm10,632 chainNetMm10,638 chainNetMm10,642 chainNetMm10,653 chainNetMm10,685 chainNetMm10,804 chainNetMm10,818 chainNetMm10,824 chainNetMm10,830 chainNetMm10,834 chainNetMm10,837 chainNetMm10,865 chainNetMm10,1055 chainNetMm10,1079 chainNetMm10,1095 chainNetMm39,79 chainNetMm39,149 chainNetMm39,202 chainNetMm39,460 chainNetMm39,470 chainNetMm39,474 chainNetMm39,541 chainNetMm39,558 chainNetMm39,561 chainNetMm39,628 chainNetMm39,633 chainNetMm39,639 chainNetMm39,643 chainNetMm39,654 chainNetMm39,686 chainNetMm39,805 chainNetMm39,819 chainNetMm39,825 chainNetMm39,831 chainNetMm39,835 chainNetMm39,838 chainNetMm39,866 chainNetMm39,1056 chainNetMm39,1080 chainNetMm39,1096 chainNetMonDom4,79 chainNetMonDom4,149 chainNetMonDom4,202 chainNetMonDom4,460 chainNetMonDom4,470 chainNetMonDom4,474 chainNetMonDom4,541 chainNetMonDom4,558 chainNetMonDom4,561 chainNetMonDom4,628 chainNetMonDom4,633 chainNetMonDom4,639 chainNetMonDom4,643 chainNetMonDom4,654 chainNetMonDom4,686 chainNetMonDom4,805 chainNetMonDom4,819 chainNetMonDom4,825 chainNetMonDom4,831 chainNetMonDom4,835 chainNetMonDom4,838 chainNetMonDom4,866 chainNetMonDom4,1056 chainNetMonDom4,1080 chainNetMonDom4,1096 chainNetOryCun2,79 chainNetOryCun2,149 chainNetOryCun2,202 chainNetOryCun2,460 chainNetOryCun2,470 chainNetOryCun2,474 chainNetOryCun2,541 chainNetOryCun2,558 chainNetOryCun2,561 chainNetOryCun2,628 chainNetOryCun2,633 chainNetOryCun2,639 chainNetOryCun2,643 chainNetOryCun2,654 chainNetOryCun2,686 chainNetOryCun2,805 chainNetOryCun2,819 chainNetOryCun2,825 chainNetOryCun2,831 chainNetOryCun2,835 chainNetOryCun2,838 chainNetOryCun2,866 chainNetOryCun2,1056 chainNetOryCun2,1080 chainNetOryCun2,1096 chainNetRn6,81 chainNetRn6,151 chainNetRn6,204 chainNetRn6,463 chainNetRn6,473 chainNetRn6,477 chainNetRn6,544 chainNetRn6,561 chainNetRn6,564 chainNetRn6,631 chainNetRn6,636 chainNetRn6,642 chainNetRn6,646 chainNetRn6,657 chainNetRn6,689 chainNetRn6,808 chainNetRn6,822 chainNetRn6,828 chainNetRn6,834 chainNetRn6,838 chainNetRn6,841 chainNetRn6,869 chainNetRn6,1059 chainNetRn6,1083 chainNetRn6,1099 chainOryCun2,76 chainOryCun2,146 chainOryCun2,199 chainOryCun2,457 chainOryCun2,467 chainOryCun2,471 chainOryCun2,538 chainOryCun2,555 chainOryCun2,558 chainOryCun2,625 chainOryCun2,630 chainOryCun2,636 chainOryCun2,640 chainOryCun2,651 chainOryCun2,683 chainOryCun2,802 chainOryCun2,816 chainOryCun2,822 chainOryCun2,828 chainOryCun2,832 chainOryCun2,835 chainOryCun2,863 chainOryCun2,1053 chainOryCun2,1077 chainOryCun2,1093 chainRn6,78 chainRn6,148 chainRn6,201 chainRn6,460 chainRn6,470 chainRn6,474 chainRn6,541 chainRn6,558 chainRn6,561 chainRn6,628 chainRn6,633 chainRn6,639 chainRn6,643 chainRn6,654 chainRn6,686 chainRn6,805 chainRn6,819 chainRn6,825 chainRn6,831 chainRn6,835 chainRn6,838 chainRn6,866 chainRn6,1056 chainRn6,1080 chainRn6,1096 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 ensGene,31 est,118 est,135 est,170 est,196 est,269 est,388 est,468 est,472 est,598 est,624 est,632 est,685 est,704 gap,67 gap,71 gap,101 gap,117 gap,120 gap,127 gap,130 gc5Base,44 genscan,102 genscan,132 gold,49 gold,108 gold,114 intronEst,117 intronEst,151 intronEst,199 intronEst,216 intronEst,251 intronEst,277 intronEst,350 intronEst,469 intronEst,549 intronEst,553 intronEst,679 intronEst,705 intronEst,713 intronEst,766 intronEst,785 microsat,53 microsat,119 mrna,64 mrna,81 mrna,116 mrna,142 mrna,215 mrna,334 mrna,401 mrna,420 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netGalGal3,78 netGalGal3,148 netGalGal3,201 netGalGal3,460 netGalGal3,470 netGalGal3,474 netGalGal3,541 netGalGal3,558 netGalGal3,561 netGalGal3,628 netGalGal3,633 netGalGal3,639 netGalGal3,643 netGalGal3,654 netGalGal3,686 netGalGal3,805 netGalGal3,819 netGalGal3,825 netGalGal3,831 netGalGal3,835 netGalGal3,838 netGalGal3,866 netGalGal3,1056 netGalGal3,1080 netGalGal3,1096 netGalVar1,82 netGalVar1,154 netGalVar1,209 netGalVar1,471 netGalVar1,481 netGalVar1,485 netGalVar1,552 netGalVar1,569 netGalVar1,572 netGalVar1,641 netGalVar1,648 netGalVar1,654 netGalVar1,658 netGalVar1,669 netGalVar1,701 netGalVar1,820 netGalVar1,834 netGalVar1,840 netGalVar1,846 netGalVar1,850 netGalVar1,853 netGalVar1,881 netGalVar1,1071 netGalVar1,1095 netGalVar1,1111 netHg19,76 netHg19,146 netHg19,199 netHg19,457 netHg19,467 netHg19,471 netHg19,538 netHg19,555 netHg19,558 netHg19,625 netHg19,630 netHg19,636 netHg19,640 netHg19,651 netHg19,683 netHg19,802 netHg19,816 netHg19,822 netHg19,828 netHg19,832 netHg19,835 netHg19,863 netHg19,1053 netHg19,1077 netHg19,1093 netMm10,76 netMm10,146 netMm10,199 netMm10,457 netMm10,467 netMm10,471 netMm10,538 netMm10,555 netMm10,558 netMm10,625 netMm10,630 netMm10,636 netMm10,640 netMm10,651 netMm10,683 netMm10,802 netMm10,816 netMm10,822 netMm10,828 netMm10,832 netMm10,835 netMm10,863 netMm10,1053 netMm10,1077 netMm10,1093 netMm39,76 netMm39,146 netMm39,199 netMm39,457 netMm39,467 netMm39,471 netMm39,538 netMm39,555 netMm39,558 netMm39,625 netMm39,630 netMm39,636 netMm39,640 netMm39,651 netMm39,683 netMm39,802 netMm39,816 netMm39,822 netMm39,828 netMm39,832 netMm39,835 netMm39,863 netMm39,1053 netMm39,1077 netMm39,1093 netMonDom4,76 netMonDom4,146 netMonDom4,199 netMonDom4,457 netMonDom4,467 netMonDom4,471 netMonDom4,538 netMonDom4,555 netMonDom4,558 netMonDom4,625 netMonDom4,630 netMonDom4,636 netMonDom4,640 netMonDom4,651 netMonDom4,683 netMonDom4,802 netMonDom4,816 netMonDom4,822 netMonDom4,828 netMonDom4,832 netMonDom4,835 netMonDom4,863 netMonDom4,1053 netMonDom4,1077 netMonDom4,1093 netOryCun2,76 netOryCun2,146 netOryCun2,199 netOryCun2,457 netOryCun2,467 netOryCun2,471 netOryCun2,538 netOryCun2,555 netOryCun2,558 netOryCun2,625 netOryCun2,630 netOryCun2,636 netOryCun2,640 netOryCun2,651 netOryCun2,683 netOryCun2,802 netOryCun2,816 netOryCun2,822 netOryCun2,828 netOryCun2,832 netOryCun2,835 netOryCun2,863 netOryCun2,1053 netOryCun2,1077 netOryCun2,1093 netRn6,78 netRn6,148 netRn6,201 netRn6,460 netRn6,470 netRn6,474 netRn6,541 netRn6,558 netRn6,561 netRn6,628 netRn6,633 netRn6,639 netRn6,643 netRn6,654 netRn6,686 netRn6,805 netRn6,819 netRn6,825 netRn6,831 netRn6,835 netRn6,838 netRn6,866 netRn6,1056 netRn6,1080 netRn6,1096 nscanGene,52 quality,45 quality,60 refGene,279 refGene,298 refGene,369 refGene,412 refSeqComposite,148 refSeqComposite,159 refSeqComposite,296 refSeqComposite,311 refSeqComposite,533 refSeqComposite,646 refSeqComposite,794 refSeqComposite,1056 refSeqComposite,1250 refSeqComposite,1269 refSeqComposite,1522 refSeqComposite,1541 refSeqComposite,1567 refSeqComposite,1656 refSeqComposite,1759 refSeqComposite,1802 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 tRNAs,35 tRNAs,59 tRNAs,68 tRNAs,86 tRNAs,120 tRNAs,131 tRNAs,144 tRNAs,253 tRNAs,310 tRNAs,371 tRNAs,445 tRNAs,471 tRNAs,475 tRNAs,491 transMapEnsemblV5,83 transMapEnsemblV5,116 transMapEnsemblV5,207 transMapEnsemblV5,320 transMapEnsemblV5,356 transMapEnsemblV5,400 transMapEnsemblV5,426 transMapEnsemblV5,479 transMapEnsemblV5,549 transMapEnsemblV5,628 transMapEnsemblV5,656 transMapEnsemblV5,715 transMapEstV5,52 transMapEstV5,85 transMapEstV5,176 transMapEstV5,289 transMapEstV5,325 transMapEstV5,369 transMapEstV5,395 transMapEstV5,448 transMapEstV5,518 transMapEstV5,597 transMapEstV5,625 transMapEstV5,684 transMapRefSeqV5,52 transMapRefSeqV5,85 transMapRefSeqV5,176 transMapRefSeqV5,289 transMapRefSeqV5,325 transMapRefSeqV5,369 transMapRefSeqV5,395 transMapRefSeqV5,448 transMapRefSeqV5,518 transMapRefSeqV5,597 transMapRefSeqV5,625 transMapRefSeqV5,684 transMapRnaV5,52 transMapRnaV5,85 transMapRnaV5,176 transMapRnaV5,289 transMapRnaV5,325 transMapRnaV5,369 transMapRnaV5,395 transMapRnaV5,448 transMapRnaV5,518 transMapRnaV5,597 transMapRnaV5,625 transMapRnaV5,684 transMapV5,53 transMapV5,191 transMapV5,282 transMapV5,395 transMapV5,431 transMapV5,475 transMapV5,501 transMapV5,554 transMapV5,624 transMapV5,703 transMapV5,731 transMapV5,790 uniprot,140 uniprot,311 uniprot,418 uniprot,459 uniprot,480 uniprot,490 uniprot,523 uniprot,603 uniprot,622 uniprot,708 uniprot,740 uniprot,759 uniprot,805 uniprot,965 uniprot,976 uniprot,988 uniprot,1001 uniprot,1048 uniprot,1071 uniprot,1152 uniprot,1164 uniprot,1179 uniprot,1217 uniprot,1226 uniprot,1234 uniprot,1239 uniprot,1286 uniprot,1458 uniprot,1599 uniprot,1634 uniprot,1735 uniprot,1779 uniprot,1807 uniprot,1922 uniprot,1949 uniprot,2017 uniprot,2023 uniprot,2032 windowmaskerSdust,91 xenoMrna,109 xenoMrna,138 xenoMrna,155 xenoMrna,190 xenoMrna,216 xenoMrna,289 xenoMrna,408 xenoMrna,474 xenoMrna,494 xenoRefGene,240 xenoRefGene,259 xenoRefGene,329 xenoRefGene,372 a91-114-31-123 chainGalVar1,694 chainHg19,676 chainMm10,676 chainMm39,676 chainNetGalVar1,697 chainNetHg19,679 chainNetMm10,678 chainNetMm39,679 chainNetOryCun2,679 chainNetRn6,682 chainOryCun2,676 chainRn6,679 netGalVar1,694 netHg19,676 netMm10,676 netMm39,676 netOryCun2,676 netRn6,679 a91-90-25-100 chainGalGal3,679 chainMonDom4,676 chainNetGalGal3,682 chainNetMonDom4,679 netGalGal3,679 netMonDom4,676 aa unipModif,1 windowmaskerSdust,97 aaron nscanGene,251 ab augustusGene,3 augustusGene,16 abbreviated chainGalGal3,591 chainGalVar1,604 chainHg19,588 chainMm10,588 chainMm39,588 chainMonDom4,588 chainNetGalGal3,594 chainNetGalVar1,607 chainNetHg19,591 chainNetMm10,590 chainNetMm39,591 chainNetMonDom4,591 chainNetOryCun2,591 chainNetRn6,594 chainOryCun2,588 chainRn6,591 netGalGal3,591 netGalVar1,604 netHg19,588 netMm10,588 netMm39,588 netMonDom4,588 netOryCun2,588 netRn6,591 ability nscanGene,165 about HLTOGAannotvHg38v1,301 chainGalGal3,466 chainGalGal3,479 chainGalGal3,855 chainGalVar1,477 chainGalVar1,490 chainGalVar1,870 chainHg19,463 chainHg19,476 chainHg19,852 chainMm10,463 chainMm10,476 chainMm10,852 chainMm39,463 chainMm39,476 chainMm39,852 chainMonDom4,463 chainMonDom4,476 chainMonDom4,852 chainNetGalGal3,469 chainNetGalGal3,482 chainNetGalGal3,858 chainNetGalVar1,480 chainNetGalVar1,493 chainNetGalVar1,873 chainNetHg19,466 chainNetHg19,479 chainNetHg19,855 chainNetMm10,465 chainNetMm10,478 chainNetMm10,854 chainNetMm39,466 chainNetMm39,479 chainNetMm39,855 chainNetMonDom4,466 chainNetMonDom4,479 chainNetMonDom4,855 chainNetOryCun2,466 chainNetOryCun2,479 chainNetOryCun2,855 chainNetRn6,469 chainNetRn6,482 chainNetRn6,858 chainOryCun2,463 chainOryCun2,476 chainOryCun2,852 chainRn6,466 chainRn6,479 chainRn6,855 est,34 est,414 genscan,127 intronEst,45 intronEst,495 microsat,98 mrna,351 netGalGal3,466 netGalGal3,479 netGalGal3,855 netGalVar1,477 netGalVar1,490 netGalVar1,870 netHg19,463 netHg19,476 netHg19,852 netMm10,463 netMm10,476 netMm10,852 netMm39,463 netMm39,476 netMm39,852 netMonDom4,463 netMonDom4,476 netMonDom4,852 netOryCun2,463 netOryCun2,476 netOryCun2,852 netRn6,466 netRn6,479 netRn6,855 refGene,217 refSeqComposite,96 refSeqComposite,854 refSeqComposite,1189 refSeqComposite,1385 refSeqComposite,1464 simpleRepeat,59 transMapEnsemblV5,133 transMapEstV5,102 transMapRefSeqV5,102 transMapRnaV5,102 transMapV5,208 xenoMrna,425 xenoRefGene,178 above chainGalGal3,538 chainGalGal3,550 chainGalGal3,570 chainGalVar1,549 chainGalVar1,561 chainGalVar1,581 chainHg19,535 chainHg19,547 chainHg19,567 chainMm10,535 chainMm10,547 chainMm10,567 chainMm39,535 chainMm39,547 chainMm39,567 chainMonDom4,535 chainMonDom4,547 chainMonDom4,567 chainNetGalGal3,541 chainNetGalGal3,553 chainNetGalGal3,573 chainNetGalVar1,552 chainNetGalVar1,564 chainNetGalVar1,584 chainNetHg19,538 chainNetHg19,550 chainNetHg19,570 chainNetMm10,537 chainNetMm10,549 chainNetMm10,569 chainNetMm39,538 chainNetMm39,550 chainNetMm39,570 chainNetMonDom4,538 chainNetMonDom4,550 chainNetMonDom4,570 chainNetOryCun2,538 chainNetOryCun2,550 chainNetOryCun2,570 chainNetRn6,541 chainNetRn6,553 chainNetRn6,573 chainOryCun2,535 chainOryCun2,547 chainOryCun2,567 chainRn6,538 chainRn6,550 chainRn6,570 nestedRepeats,218 netGalGal3,538 netGalGal3,550 netGalGal3,570 netGalVar1,549 netGalVar1,561 netGalVar1,581 netHg19,535 netHg19,547 netHg19,567 netMm10,535 netMm10,547 netMm10,567 netMm39,535 netMm39,547 netMm39,567 netMonDom4,535 netMonDom4,547 netMonDom4,567 netOryCun2,535 netOryCun2,547 netOryCun2,567 netRn6,538 netRn6,550 netRn6,570 tRNAs,122 uniprot,1525 abundance chainGalGal3,183 chainGalVar1,191 chainHg19,181 chainMm10,181 chainMm39,181 chainMonDom4,181 chainNetGalGal3,186 chainNetGalVar1,194 chainNetHg19,184 chainNetMm10,183 chainNetMm39,184 chainNetMonDom4,184 chainNetOryCun2,184 chainNetRn6,186 chainOryCun2,181 chainRn6,183 netGalGal3,183 netGalVar1,191 netHg19,181 netMm10,181 netMm39,181 netMonDom4,181 netOryCun2,181 netRn6,183 acad chainGalGal3,1076 chainGalVar1,1091 chainHg19,1073 chainMm10,1073 chainMm39,1073 chainMonDom4,1073 chainNetGalGal3,1079 chainNetGalVar1,1094 chainNetHg19,1076 chainNetMm10,1075 chainNetMm39,1076 chainNetMonDom4,1076 chainNetOryCun2,1076 chainNetRn6,1079 chainOryCun2,1073 chainRn6,1076 netGalGal3,1076 netGalVar1,1091 netHg19,1073 netMm10,1073 netMm39,1073 netMonDom4,1073 netOryCun2,1073 netRn6,1076 acc ucscToRefSeq,2 acceptor genscan,32 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 ensGene,56 ensGene,100 refSeqComposite,1291 refSeqComposite,1355 refSeqComposite,1445 refSeqComposite,1654 transMapEnsemblV5,519 transMapEnsemblV5,578 transMapEstV5,488 transMapEstV5,547 transMapRefSeqV5,488 transMapRefSeqV5,547 transMapRnaV5,488 transMapRnaV5,547 transMapV5,594 transMapV5,653 uniprot,896 uniprot,1706 uniprot,1838 accessed refSeqComposite,1300 refSeqComposite,1323 transMapEnsemblV5,528 transMapEstV5,497 transMapRefSeqV5,497 transMapRnaV5,497 transMapV5,603 accesses refSeqComposite,1628 accessing refSeqComposite,1386 transMapEnsemblV5,571 transMapEstV5,540 transMapRefSeqV5,540 transMapRnaV5,540 transMapV5,646 accession refGene,157 refGene,169 refSeqComposite,781 refSeqComposite,806 ucscToRefSeq,4 ucscToRefSeq,18 xenoRefGene,118 xenoRefGene,130 accession.version-srcuniq.destuniq transMapEnsemblV5,422 transMapEstV5,391 transMapRefSeqV5,391 transMapRnaV5,391 transMapV5,497 accessions refSeqComposite,222 refSeqComposite,351 refSeqComposite,495 transMapEnsemblV5,394 transMapEstV5,363 transMapRefSeqV5,363 transMapRnaV5,363 transMapV5,469 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 accordingly tRNAs,281 accurate nscanGene,159 accurately HLTOGAannotvHg38v1,91 acgt chainGalGal3,678 chainGalVar1,693 chainHg19,675 chainMm10,675 chainMm39,675 chainMonDom4,675 chainNetGalGal3,681 chainNetGalVar1,696 chainNetHg19,678 chainNetMm10,677 chainNetMm39,678 chainNetMonDom4,678 chainNetOryCun2,678 chainNetRn6,681 chainOryCun2,675 chainRn6,678 netGalGal3,678 netGalVar1,693 netHg19,675 netMm10,675 netMm39,675 netMonDom4,675 netOryCun2,675 netRn6,678 acid blastHg18KG,63 unipModif,5 unipMut,4 uniprot,339 uniprot,351 acids blastHg18KG,135 ensGene,196 est,763 est,788 intronEst,847 intronEst,872 microsat,126 mrna,480 mrna,505 nscanGene,325 refGene,390 refGene,423 refSeqComposite,1780 refSeqComposite,1813 simpleRepeat,86 tRNAs,382 tRNAs,405 tRNAs,458 tRNAs,501 uniprot,620 uniprot,1998 xenoMrna,554 xenoMrna,579 xenoRefGene,350 xenoRefGene,383 acronym uniprot,546 added chainGalGal3,601 chainGalVar1,614 chainHg19,598 chainMm10,598 chainMm39,598 chainMonDom4,598 chainNetGalGal3,604 chainNetGalVar1,617 chainNetHg19,601 chainNetMm10,600 chainNetMm39,601 chainNetMonDom4,601 chainNetOryCun2,601 chainNetRn6,604 chainOryCun2,598 chainRn6,601 nestedRepeats,147 netGalGal3,601 netGalVar1,614 netHg19,598 netMm10,598 netMm39,598 netMonDom4,598 netOryCun2,598 netRn6,601 transMapEnsemblV5,428 transMapEnsemblV5,438 transMapEstV5,397 transMapEstV5,407 transMapRefSeqV5,397 transMapRefSeqV5,407 transMapRnaV5,397 transMapRnaV5,407 transMapV5,503 transMapV5,513 uniprot,1187 additional HLTOGAannotvHg38v1,299 nestedRepeats,288 rmsk,295 additions refGene,60 refSeqComposite,119 adjust refSeqComposite,744 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 uniprot,1917 advice chainGalGal3,941 chainGalGal3,973 chainGalVar1,956 chainGalVar1,988 chainHg19,938 chainHg19,970 chainMm10,938 chainMm10,970 chainMm39,938 chainMm39,970 chainMonDom4,938 chainMonDom4,970 chainNetGalGal3,944 chainNetGalGal3,976 chainNetGalVar1,959 chainNetGalVar1,991 chainNetHg19,941 chainNetHg19,973 chainNetMm10,940 chainNetMm10,972 chainNetMm39,941 chainNetMm39,973 chainNetMonDom4,941 chainNetMonDom4,973 chainNetOryCun2,941 chainNetOryCun2,973 chainNetRn6,944 chainNetRn6,976 chainOryCun2,938 chainOryCun2,970 chainRn6,941 chainRn6,973 netGalGal3,941 netGalGal3,973 netGalVar1,956 netGalVar1,988 netHg19,938 netHg19,970 netMm10,938 netMm10,970 netMm39,938 netMm39,970 netMonDom4,938 netMonDom4,970 netOryCun2,938 netOryCun2,970 netRn6,941 netRn6,973 advise refSeqComposite,78 ae HLTOGAannotvHg38v1,347 af nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainGalGal3,88 chainGalVar1,92 chainHg19,86 chainMm10,86 chainMm39,86 chainMonDom4,86 chainNetGalGal3,91 chainNetGalVar1,95 chainNetHg19,89 chainNetMm10,88 chainNetMm39,89 chainNetMonDom4,89 chainNetOryCun2,89 chainNetRn6,91 chainOryCun2,86 chainRn6,88 netGalGal3,88 netGalVar1,92 netHg19,86 netMm10,86 netMm39,86 netMonDom4,86 netOryCun2,86 netRn6,88 after chainGalGal3,913 chainGalVar1,928 chainHg19,910 chainMm10,910 chainMm39,910 chainMonDom4,910 chainNetGalGal3,916 chainNetGalVar1,931 chainNetHg19,913 chainNetMm10,912 chainNetMm39,913 chainNetMonDom4,913 chainNetOryCun2,913 chainNetRn6,916 chainOryCun2,910 chainRn6,913 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netGalGal3,913 netGalVar1,928 netHg19,910 netMm10,910 netMm39,910 netMonDom4,910 netOryCun2,910 netRn6,913 uniprot,294 uniprot,1329 ag intronEst,91 again transMapEnsemblV5,410 transMapEstV5,379 transMapRefSeqV5,379 transMapRnaV5,379 transMapV5,485 uniprot,629 uniprot,1500 against est,653 intronEst,37 intronEst,734 mrna,344 mrna,393 refGene,261 refSeqComposite,1232 transMapEnsemblV5,126 transMapEstV5,95 transMapRefSeqV5,95 transMapRnaV5,95 transMapV5,201 xenoMrna,418 xenoMrna,465 xenoRefGene,222 agarwala windowmaskerSdust,98 ahmed HLTOGAannotvHg38v1,348 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al HLTOGAannotvHg38v1,355 cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 ensGene,46 ensGene,189 nscanGene,294 nscanGene,313 refGene,381 refSeqComposite,1771 transMapEnsemblV5,736 transMapEstV5,705 transMapRefSeqV5,705 transMapRnaV5,705 transMapV5,811 xenoRefGene,341 alejo uniprot,1966 algorithm augustusGene,130 tRNAs,40 transMapEnsemblV5,28 transMapEstV5,26 transMapRefSeqV5,26 transMapRnaV5,26 transMapV5,25 algorithms uniprot,52 align chainGalGal3,199 chainGalVar1,207 chainHg19,197 chainMm10,197 chainMm39,197 chainMonDom4,197 chainNetGalGal3,202 chainNetGalVar1,210 chainNetHg19,200 chainNetMm10,199 chainNetMm39,200 chainNetMonDom4,200 chainNetOryCun2,200 chainNetRn6,202 chainOryCun2,197 chainRn6,199 est,683 intronEst,764 netGalGal3,199 netGalVar1,207 netHg19,197 netMm10,197 netMm39,197 netMonDom4,197 netOryCun2,197 netRn6,199 nscanGene,174 uniprot,1216 alignable chainGalGal3,23 chainGalGal3,39 chainGalVar1,26 chainGalVar1,42 chainHg19,22 chainHg19,38 chainMm10,22 chainMm10,38 chainMm39,22 chainMm39,38 chainMonDom4,22 chainMonDom4,38 chainNetGalGal3,26 chainNetGalGal3,42 chainNetGalVar1,29 chainNetGalVar1,45 chainNetHg19,25 chainNetHg19,41 chainNetMm10,24 chainNetMm10,40 chainNetMm39,25 chainNetMm39,41 chainNetMonDom4,25 chainNetMonDom4,41 chainNetOryCun2,25 chainNetOryCun2,41 chainNetRn6,26 chainNetRn6,42 chainOryCun2,22 chainOryCun2,38 chainRn6,23 chainRn6,39 netGalGal3,23 netGalGal3,39 netGalVar1,26 netGalVar1,42 netHg19,22 netHg19,38 netMm10,22 netMm10,38 netMm39,22 netMm39,38 netMonDom4,22 netMonDom4,38 netOryCun2,22 netOryCun2,38 netRn6,23 netRn6,39 aligned blastHg18KG,47 blastHg18KG,71 chainGalGal3,594 chainGalVar1,607 chainHg19,591 chainMm10,591 chainMm39,591 chainMonDom4,591 chainNetGalGal3,597 chainNetGalVar1,610 chainNetHg19,594 chainNetMm10,593 chainNetMm39,594 chainNetMonDom4,594 chainNetOryCun2,594 chainNetRn6,597 chainOryCun2,591 chainRn6,594 est,652 est,688 intronEst,36 intronEst,155 intronEst,733 intronEst,769 mrna,392 mrna,404 netGalGal3,594 netGalVar1,607 netHg19,591 netMm10,591 netMm39,591 netMonDom4,591 netOryCun2,591 netRn6,594 nscanGene,92 refGene,260 refGene,282 refSeqComposite,81 refSeqComposite,190 refSeqComposite,305 refSeqComposite,898 refSeqComposite,1061 refSeqComposite,1231 refSeqComposite,1253 transMapV5,117 uniprot,783 uniprot,973 uniprot,1007 uniprot,1246 uniprot,1335 uniprot,1472 xenoMrna,464 xenoMrna,477 xenoRefGene,221 xenoRefGene,243 aligning chainGalGal3,137 chainGalGal3,338 chainGalGal3,368 chainGalVar1,143 chainGalVar1,349 chainGalVar1,379 chainHg19,135 chainHg19,335 chainHg19,365 chainMm10,135 chainMm10,335 chainMm10,365 chainMm39,135 chainMm39,335 chainMm39,365 chainMonDom4,135 chainMonDom4,335 chainMonDom4,365 chainNetGalGal3,140 chainNetGalGal3,341 chainNetGalGal3,371 chainNetGalVar1,146 chainNetGalVar1,352 chainNetGalVar1,382 chainNetHg19,138 chainNetHg19,338 chainNetHg19,368 chainNetMm10,137 chainNetMm10,337 chainNetMm10,367 chainNetMm39,138 chainNetMm39,338 chainNetMm39,368 chainNetMonDom4,138 chainNetMonDom4,338 chainNetMonDom4,368 chainNetOryCun2,138 chainNetOryCun2,338 chainNetOryCun2,368 chainNetRn6,140 chainNetRn6,341 chainNetRn6,371 chainOryCun2,135 chainOryCun2,335 chainOryCun2,365 chainRn6,137 chainRn6,338 chainRn6,368 est,400 intronEst,481 netGalGal3,137 netGalGal3,338 netGalGal3,368 netGalVar1,143 netGalVar1,349 netGalVar1,379 netHg19,135 netHg19,335 netHg19,365 netMm10,135 netMm10,335 netMm10,365 netMm39,135 netMm39,335 netMm39,365 netMonDom4,135 netMonDom4,335 netMonDom4,365 netOryCun2,135 netOryCun2,335 netOryCun2,365 netRn6,137 netRn6,338 netRn6,368 uniprot,952 alignment HLTOGAannotvHg38v1,65 blastHg18KG,167 chainGalGal3,263 chainGalGal3,1023 chainGalVar1,271 chainGalVar1,1038 chainHg19,261 chainHg19,1020 chainMm10,261 chainMm10,1020 chainMm39,261 chainMm39,1020 chainMonDom4,261 chainMonDom4,1020 chainNetGalGal3,266 chainNetGalGal3,1026 chainNetGalVar1,274 chainNetGalVar1,1041 chainNetHg19,264 chainNetHg19,1023 chainNetMm10,263 chainNetMm10,1022 chainNetMm39,264 chainNetMm39,1023 chainNetMonDom4,264 chainNetMonDom4,1023 chainNetOryCun2,264 chainNetOryCun2,1023 chainNetRn6,266 chainNetRn6,1026 chainOryCun2,261 chainOryCun2,1020 chainRn6,263 chainRn6,1023 est,58 est,423 est,429 est,441 est,693 est,806 intronEst,78 intronEst,142 intronEst,504 intronEst,510 intronEst,522 intronEst,774 intronEst,890 mrna,39 mrna,362 mrna,368 mrna,380 mrna,409 mrna,523 netGalGal3,9 netGalGal3,263 netGalGal3,1023 netGalVar1,12 netGalVar1,271 netGalVar1,1038 netHg19,8 netHg19,261 netHg19,1020 netMm10,8 netMm10,261 netMm10,1020 netMm39,8 netMm39,261 netMm39,1020 netMonDom4,8 netMonDom4,261 netMonDom4,1020 netOryCun2,8 netOryCun2,261 netOryCun2,1020 netRn6,9 netRn6,263 netRn6,1023 nscanGene,54 nscanGene,150 nscanGene,322 refGene,271 refGene,287 refGene,347 refSeqComposite,194 refSeqComposite,328 refSeqComposite,460 refSeqComposite,1150 refSeqComposite,1242 refSeqComposite,1258 refSeqComposite,1737 transMapEnsemblV5,27 transMapEnsemblV5,79 transMapEnsemblV5,104 transMapEnsemblV5,141 transMapEnsemblV5,197 transMapEnsemblV5,211 transMapEnsemblV5,390 transMapEnsemblV5,433 transMapEstV5,25 transMapEstV5,48 transMapEstV5,73 transMapEstV5,110 transMapEstV5,166 transMapEstV5,180 transMapEstV5,359 transMapEstV5,402 transMapRefSeqV5,25 transMapRefSeqV5,48 transMapRefSeqV5,73 transMapRefSeqV5,110 transMapRefSeqV5,166 transMapRefSeqV5,180 transMapRefSeqV5,359 transMapRefSeqV5,402 transMapRnaV5,25 transMapRnaV5,48 transMapRnaV5,73 transMapRnaV5,110 transMapRnaV5,166 transMapRnaV5,180 transMapRnaV5,359 transMapRnaV5,402 transMapV5,24 transMapV5,49 transMapV5,179 transMapV5,216 transMapV5,272 transMapV5,286 transMapV5,465 transMapV5,508 unipAliSwissprot,4 unipAliTrembl,4 uniprot,108 uniprot,135 uniprot,191 uniprot,807 uniprot,914 uniprot,1175 uniprot,1429 uniprot,1523 uniprot,1620 uniprot,1629 uniprot,1636 uniprot,1642 uniprot,1704 uniprot,1862 xenoMrna,43 xenoMrna,436 xenoMrna,442 xenoMrna,454 xenoMrna,482 xenoMrna,597 xenoRefGene,232 xenoRefGene,248 xenoRefGene,307 alignments HLTOGAannotvHg38v1,23 HLTOGAannotvHg38v1,80 HLTOGAannotvHg38v1,313 augustusGene,300 blastHg18KG,18 chainGalGal3,10 chainGalGal3,64 chainGalGal3,453 chainGalGal3,606 chainGalGal3,618 chainGalGal3,626 chainGalGal3,653 chainGalGal3,771 chainGalGal3,1043 chainGalGal3,1108 chainGalVar1,13 chainGalVar1,67 chainGalVar1,464 chainGalVar1,619 chainGalVar1,631 chainGalVar1,639 chainGalVar1,668 chainGalVar1,786 chainGalVar1,1058 chainGalVar1,1123 chainHg19,9 chainHg19,63 chainHg19,450 chainHg19,603 chainHg19,615 chainHg19,623 chainHg19,650 chainHg19,768 chainHg19,1040 chainHg19,1105 chainMm10,9 chainMm10,63 chainMm10,450 chainMm10,603 chainMm10,615 chainMm10,623 chainMm10,650 chainMm10,768 chainMm10,1040 chainMm10,1105 chainMm39,9 chainMm39,63 chainMm39,450 chainMm39,603 chainMm39,615 chainMm39,623 chainMm39,650 chainMm39,768 chainMm39,1040 chainMm39,1105 chainMonDom4,9 chainMonDom4,63 chainMonDom4,450 chainMonDom4,603 chainMonDom4,615 chainMonDom4,623 chainMonDom4,650 chainMonDom4,768 chainMonDom4,1040 chainMonDom4,1105 chainNetGalGal3,13 chainNetGalGal3,67 chainNetGalGal3,456 chainNetGalGal3,609 chainNetGalGal3,621 chainNetGalGal3,629 chainNetGalGal3,656 chainNetGalGal3,774 chainNetGalGal3,1046 chainNetGalGal3,1111 chainNetGalGal3Viewchain,11 chainNetGalGal3Viewnet,11 chainNetGalVar1,16 chainNetGalVar1,70 chainNetGalVar1,467 chainNetGalVar1,622 chainNetGalVar1,634 chainNetGalVar1,642 chainNetGalVar1,671 chainNetGalVar1,789 chainNetGalVar1,1061 chainNetGalVar1,1126 chainNetGalVar1Viewchain,12 chainNetGalVar1Viewnet,12 chainNetHg19,12 chainNetHg19,66 chainNetHg19,453 chainNetHg19,606 chainNetHg19,618 chainNetHg19,626 chainNetHg19,653 chainNetHg19,771 chainNetHg19,1043 chainNetHg19,1108 chainNetHg19Viewchain,10 chainNetHg19Viewnet,10 chainNetMm10,11 chainNetMm10,65 chainNetMm10,452 chainNetMm10,605 chainNetMm10,617 chainNetMm10,625 chainNetMm10,652 chainNetMm10,770 chainNetMm10,1042 chainNetMm10,1107 chainNetMm10Viewchain,10 chainNetMm10Viewnet,10 chainNetMm39,12 chainNetMm39,66 chainNetMm39,453 chainNetMm39,606 chainNetMm39,618 chainNetMm39,626 chainNetMm39,653 chainNetMm39,771 chainNetMm39,1043 chainNetMm39,1108 chainNetMm39Viewchain,10 chainNetMm39Viewnet,10 chainNetMonDom4,12 chainNetMonDom4,66 chainNetMonDom4,453 chainNetMonDom4,606 chainNetMonDom4,618 chainNetMonDom4,626 chainNetMonDom4,653 chainNetMonDom4,771 chainNetMonDom4,1043 chainNetMonDom4,1108 chainNetMonDom4Viewchain,10 chainNetMonDom4Viewnet,10 chainNetOryCun2,12 chainNetOryCun2,66 chainNetOryCun2,453 chainNetOryCun2,606 chainNetOryCun2,618 chainNetOryCun2,626 chainNetOryCun2,653 chainNetOryCun2,771 chainNetOryCun2,1043 chainNetOryCun2,1108 chainNetOryCun2Viewchain,10 chainNetOryCun2Viewnet,10 chainNetRn6,13 chainNetRn6,67 chainNetRn6,456 chainNetRn6,609 chainNetRn6,621 chainNetRn6,629 chainNetRn6,656 chainNetRn6,774 chainNetRn6,1046 chainNetRn6,1111 chainNetRn6Viewchain,11 chainNetRn6Viewnet,11 chainOryCun2,9 chainOryCun2,63 chainOryCun2,450 chainOryCun2,603 chainOryCun2,615 chainOryCun2,623 chainOryCun2,650 chainOryCun2,768 chainOryCun2,1040 chainOryCun2,1105 chainRn6,10 chainRn6,64 chainRn6,453 chainRn6,606 chainRn6,618 chainRn6,626 chainRn6,653 chainRn6,771 chainRn6,1043 chainRn6,1108 est,16 est,702 intronEst,17 intronEst,783 mrna,17 mrna,418 ncbiRefSeqPsl,2 ncbiRefSeqPsl,4 netGalGal3,64 netGalGal3,453 netGalGal3,606 netGalGal3,618 netGalGal3,626 netGalGal3,653 netGalGal3,771 netGalGal3,1043 netGalGal3,1108 netGalVar1,67 netGalVar1,464 netGalVar1,619 netGalVar1,631 netGalVar1,639 netGalVar1,668 netGalVar1,786 netGalVar1,1058 netGalVar1,1123 netHg19,63 netHg19,450 netHg19,603 netHg19,615 netHg19,623 netHg19,650 netHg19,768 netHg19,1040 netHg19,1105 netMm10,63 netMm10,450 netMm10,603 netMm10,615 netMm10,623 netMm10,650 netMm10,768 netMm10,1040 netMm10,1105 netMm39,63 netMm39,450 netMm39,603 netMm39,615 netMm39,623 netMm39,650 netMm39,768 netMm39,1040 netMm39,1105 netMonDom4,63 netMonDom4,450 netMonDom4,603 netMonDom4,615 netMonDom4,623 netMonDom4,650 netMonDom4,768 netMonDom4,1040 netMonDom4,1105 netOryCun2,63 netOryCun2,450 netOryCun2,603 netOryCun2,615 netOryCun2,623 netOryCun2,650 netOryCun2,768 netOryCun2,1040 netOryCun2,1105 netRn6,64 netRn6,453 netRn6,606 netRn6,618 netRn6,626 netRn6,653 netRn6,771 netRn6,1043 netRn6,1108 nscanGene,118 nscanGene,136 nscanGene,276 refGene,296 refSeqComposite,268 refSeqComposite,367 refSeqComposite,434 refSeqComposite,436 refSeqComposite,1211 refSeqComposite,1267 refSeqComposite,1424 rmsk,306 tRNAs,241 transMapEnsemblV5,21 transMapEnsemblV5,72 transMapEnsemblV5,155 transMapEnsemblV5,168 transMapEnsemblV5,327 transMapEnsemblV5,340 transMapEnsemblV5,350 transMapEnsemblV5,373 transMapEnsemblV5,444 transMapEnsemblV5,456 transMapEnsemblV5,771 transMapEstV5,19 transMapEstV5,41 transMapEstV5,124 transMapEstV5,137 transMapEstV5,296 transMapEstV5,309 transMapEstV5,319 transMapEstV5,342 transMapEstV5,413 transMapEstV5,425 transMapEstV5,740 transMapRefSeqV5,19 transMapRefSeqV5,41 transMapRefSeqV5,124 transMapRefSeqV5,137 transMapRefSeqV5,296 transMapRefSeqV5,309 transMapRefSeqV5,319 transMapRefSeqV5,342 transMapRefSeqV5,413 transMapRefSeqV5,425 transMapRefSeqV5,740 transMapRnaV5,19 transMapRnaV5,41 transMapRnaV5,124 transMapRnaV5,137 transMapRnaV5,296 transMapRnaV5,309 transMapRnaV5,319 transMapRnaV5,342 transMapRnaV5,413 transMapRnaV5,425 transMapRnaV5,740 transMapV5,4 transMapV5,18 transMapV5,40 transMapV5,68 transMapV5,86 transMapV5,128 transMapV5,141 transMapV5,230 transMapV5,243 transMapV5,402 transMapV5,415 transMapV5,425 transMapV5,448 transMapV5,519 transMapV5,531 transMapV5,846 uniprot,82 uniprot,100 uniprot,637 uniprot,793 uniprot,814 uniprot,876 uniprot,1138 uniprot,1148 uniprot,1161 uniprot,1309 uniprot,1410 uniprot,1487 xenoMrna,17 xenoMrna,492 xenoRefGene,257 aligns transMapV5,163 all augustusGene,207 chainGalGal3,625 chainGalVar1,638 chainHg19,622 chainMm10,622 chainMm39,622 chainMonDom4,622 chainNetGalGal3,628 chainNetGalVar1,641 chainNetHg19,625 chainNetMm10,624 chainNetMm39,625 chainNetMonDom4,625 chainNetOryCun2,625 chainNetRn6,628 chainOryCun2,622 chainRn6,625 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 est,192 est,246 est,301 est,396 est,488 gold,126 intronEst,120 intronEst,273 intronEst,327 intronEst,382 intronEst,477 intronEst,569 mrna,138 mrna,192 mrna,247 ncbiRefSeq,2 nestedRepeats,138 nestedRepeats,170 netGalGal3,625 netGalVar1,638 netHg19,622 netMm10,622 netMm39,622 netMonDom4,622 netOryCun2,622 netRn6,625 refSeqComposite,34 refSeqComposite,85 refSeqComposite,178 refSeqComposite,183 refSeqComposite,199 refSeqComposite,201 refSeqComposite,215 refSeqComposite,345 refSeqComposite,381 refSeqComposite,589 refSeqComposite,792 refSeqComposite,1410 refSeqComposite,1574 refSeqComposite,1666 refSeqComposite,1671 rmsk,65 tRNAs,215 transMapEnsemblV5,191 transMapEstV5,160 transMapRefSeqV5,160 transMapRnaV5,160 transMapV5,266 uniprot,89 uniprot,121 uniprot,204 uniprot,395 uniprot,956 uniprot,1107 uniprot,1167 uniprot,1311 uniprot,1337 uniprot,1343 uniprot,1418 uniprot,1542 uniprot,1685 uniprot,1979 xenoMrna,212 xenoMrna,266 xenoMrna,321 allow nscanGene,69 allowed est,664 intronEst,745 allows augustusGene,168 chainGalGal3,83 chainGalVar1,87 chainHg19,81 chainMm10,81 chainMm39,81 chainMonDom4,81 chainNetGalGal3,86 chainNetGalVar1,90 chainNetHg19,84 chainNetMm10,83 chainNetMm39,84 chainNetMonDom4,84 chainNetOryCun2,84 chainNetRn6,86 chainOryCun2,81 chainRn6,83 est,391 intronEst,472 mrna,337 netGalGal3,83 netGalVar1,87 netHg19,81 netMm10,81 netMm39,81 netMonDom4,81 netOryCun2,81 netRn6,83 refGene,188 refSeqComposite,825 transMapEnsemblV5,119 transMapEnsemblV5,289 transMapEstV5,88 transMapEstV5,258 transMapRefSeqV5,88 transMapRefSeqV5,258 transMapRnaV5,88 transMapRnaV5,258 transMapV5,194 transMapV5,364 xenoMrna,411 xenoRefGene,149 aln unipAliSwissprot,2 unipAliTrembl,2 alone augustusGene,33 along nscanGene,48 transMapEnsemblV5,182 transMapEstV5,151 transMapRefSeqV5,151 transMapRnaV5,151 transMapV5,257 alpha refSeqComposite,418 already chainGalGal3,816 chainGalVar1,831 chainHg19,813 chainMm10,813 chainMm39,813 chainMonDom4,813 chainNetGalGal3,819 chainNetGalVar1,834 chainNetHg19,816 chainNetMm10,815 chainNetMm39,816 chainNetMonDom4,816 chainNetOryCun2,816 chainNetRn6,819 chainOryCun2,813 chainRn6,816 netGalGal3,816 netGalVar1,831 netHg19,813 netMm10,813 netMm39,813 netMonDom4,813 netOryCun2,813 netRn6,816 also HLTOGAannotvHg38v1,190 blastHg18KG,137 chainGalGal3,94 chainGalVar1,98 chainHg19,92 chainMm10,92 chainMm39,92 chainMonDom4,92 chainNetGalGal3,97 chainNetGalVar1,101 chainNetHg19,95 chainNetMm10,94 chainNetMm39,95 chainNetMonDom4,95 chainNetOryCun2,95 chainNetRn6,97 chainOryCun2,92 chainRn6,94 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ensGene,48 est,273 est,381 est,432 est,601 gold,34 intronEst,354 intronEst,462 intronEst,513 intronEst,682 mrna,219 mrna,327 mrna,371 netGalGal3,94 netGalVar1,98 netHg19,92 netMm10,92 netMm39,92 netMonDom4,92 netOryCun2,92 netRn6,94 refSeqComposite,1129 refSeqComposite,1321 refSeqComposite,1354 refSeqComposite,1586 transMapEnsemblV5,109 transMapEnsemblV5,144 transMapEnsemblV5,648 transMapEstV5,78 transMapEstV5,113 transMapEstV5,617 transMapRefSeqV5,78 transMapRefSeqV5,113 transMapRefSeqV5,617 transMapRnaV5,78 transMapRnaV5,113 transMapRnaV5,617 transMapV5,184 transMapV5,219 transMapV5,723 uniprot,666 uniprot,706 uniprot,1799 xenoMrna,293 xenoMrna,401 xenoMrna,445 alt uniprot,850 alter est,129 intronEst,210 mrna,75 xenoMrna,149 alternating gold,80 alternative augustusGene,122 unipAliSwissprot,16 uniprot,163 uniprot,670 alternatives-from-sampling augustusGene,131 although tRNAs,133 altschul blastHg18KG,155 alus rmsk,160 always gold,111 uniprot,503 uniprot,960 uniprot,1411 uniprot,1579 xenoMrna,87 ambiguous refSeqComposite,990 amino blastHg18KG,62 blastHg18KG,134 unipModif,4 unipMut,3 uniprot,338 uniprot,350 uniprot,619 amount rmsk,215 amsterdam genscan,201 an blastHg18KG,91 chainGalGal3,155 chainGalGal3,182 chainGalGal3,188 chainGalVar1,163 chainGalVar1,190 chainGalVar1,196 chainHg19,153 chainHg19,180 chainHg19,186 chainMm10,153 chainMm10,180 chainMm10,186 chainMm39,153 chainMm39,180 chainMm39,186 chainMonDom4,153 chainMonDom4,180 chainMonDom4,186 chainNetGalGal3,158 chainNetGalGal3,185 chainNetGalGal3,191 chainNetGalVar1,166 chainNetGalVar1,193 chainNetGalVar1,199 chainNetHg19,156 chainNetHg19,183 chainNetHg19,189 chainNetMm10,155 chainNetMm10,182 chainNetMm10,188 chainNetMm39,156 chainNetMm39,183 chainNetMm39,189 chainNetMonDom4,156 chainNetMonDom4,183 chainNetMonDom4,189 chainNetOryCun2,156 chainNetOryCun2,183 chainNetOryCun2,189 chainNetRn6,158 chainNetRn6,185 chainNetRn6,191 chainOryCun2,153 chainOryCun2,180 chainOryCun2,186 chainRn6,155 chainRn6,182 chainRn6,188 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 est,450 est,497 est,580 gc5Base,65 intronEst,61 intronEst,531 intronEst,578 intronEst,661 nestedRepeats,196 nestedRepeats,347 netGalGal3,155 netGalGal3,182 netGalGal3,188 netGalVar1,163 netGalVar1,190 netGalVar1,196 netHg19,153 netHg19,180 netHg19,186 netMm10,153 netMm10,180 netMm10,186 netMm39,153 netMm39,180 netMm39,186 netMonDom4,153 netMonDom4,180 netMonDom4,186 netOryCun2,153 netOryCun2,180 netOryCun2,186 netRn6,155 netRn6,182 netRn6,188 nscanGene,71 nscanGene,185 quality,79 refGene,182 refGene,270 refGene,383 refSeqComposite,748 refSeqComposite,819 refSeqComposite,1241 refSeqComposite,1773 rmsk,370 tRNAs,26 tRNAs,34 tRNAs,46 uniprot,765 uniprot,899 uniprot,1203 uniprot,1467 uniprot,1568 xenoRefGene,143 xenoRefGene,231 xenoRefGene,343 analysis refSeqComposite,76 refSeqComposite,1459 tRNAs,400 tRNAs,495 transMapEnsemblV5,540 transMapEstV5,509 transMapRefSeqV5,509 transMapRnaV5,509 transMapV5,615 uniprot,1648 uniprot,1728 analyze microsat,122 simpleRepeat,82 and HLTOGAannotvHg38v1,12 HLTOGAannotvHg38v1,34 HLTOGAannotvHg38v1,61 HLTOGAannotvHg38v1,69 HLTOGAannotvHg38v1,83 HLTOGAannotvHg38v1,86 HLTOGAannotvHg38v1,110 HLTOGAannotvHg38v1,130 HLTOGAannotvHg38v1,153 HLTOGAannotvHg38v1,176 HLTOGAannotvHg38v1,223 HLTOGAannotvHg38v1,310 augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 blastHg18KG,10 blastHg18KG,25 blastHg18KG,125 chainGalGal3,100 chainGalGal3,115 chainGalGal3,231 chainGalGal3,239 chainGalGal3,253 chainGalGal3,293 chainGalGal3,316 chainGalGal3,442 chainGalGal3,597 chainGalGal3,632 chainGalGal3,641 chainGalGal3,782 chainGalGal3,860 chainGalGal3,892 chainGalGal3,903 chainGalGal3,912 chainGalGal3,937 chainGalGal3,952 chainGalGal3,977 chainGalGal3,983 chainGalGal3,989 chainGalGal3,996 chainGalGal3,1002 chainGalGal3,1066 chainGalGal3,1071 chainGalVar1,106 chainGalVar1,121 chainGalVar1,239 chainGalVar1,247 chainGalVar1,261 chainGalVar1,303 chainGalVar1,327 chainGalVar1,453 chainGalVar1,610 chainGalVar1,647 chainGalVar1,656 chainGalVar1,797 chainGalVar1,875 chainGalVar1,907 chainGalVar1,918 chainGalVar1,927 chainGalVar1,952 chainGalVar1,967 chainGalVar1,992 chainGalVar1,998 chainGalVar1,1004 chainGalVar1,1011 chainGalVar1,1017 chainGalVar1,1081 chainGalVar1,1086 chainHg19,98 chainHg19,113 chainHg19,229 chainHg19,237 chainHg19,251 chainHg19,291 chainHg19,313 chainHg19,439 chainHg19,594 chainHg19,629 chainHg19,638 chainHg19,779 chainHg19,857 chainHg19,889 chainHg19,900 chainHg19,909 chainHg19,934 chainHg19,949 chainHg19,974 chainHg19,980 chainHg19,986 chainHg19,993 chainHg19,999 chainHg19,1063 chainHg19,1068 chainMm10,98 chainMm10,113 chainMm10,229 chainMm10,237 chainMm10,251 chainMm10,291 chainMm10,313 chainMm10,439 chainMm10,594 chainMm10,629 chainMm10,638 chainMm10,779 chainMm10,857 chainMm10,889 chainMm10,900 chainMm10,909 chainMm10,934 chainMm10,949 chainMm10,974 chainMm10,980 chainMm10,986 chainMm10,993 chainMm10,999 chainMm10,1063 chainMm10,1068 chainMm39,98 chainMm39,113 chainMm39,229 chainMm39,237 chainMm39,251 chainMm39,291 chainMm39,313 chainMm39,439 chainMm39,594 chainMm39,629 chainMm39,638 chainMm39,779 chainMm39,857 chainMm39,889 chainMm39,900 chainMm39,909 chainMm39,934 chainMm39,949 chainMm39,974 chainMm39,980 chainMm39,986 chainMm39,993 chainMm39,999 chainMm39,1063 chainMm39,1068 chainMonDom4,98 chainMonDom4,113 chainMonDom4,229 chainMonDom4,237 chainMonDom4,251 chainMonDom4,291 chainMonDom4,313 chainMonDom4,439 chainMonDom4,594 chainMonDom4,629 chainMonDom4,638 chainMonDom4,779 chainMonDom4,857 chainMonDom4,889 chainMonDom4,900 chainMonDom4,909 chainMonDom4,934 chainMonDom4,949 chainMonDom4,974 chainMonDom4,980 chainMonDom4,986 chainMonDom4,993 chainMonDom4,999 chainMonDom4,1063 chainMonDom4,1068 chainNetGalGal3,11 chainNetGalGal3,103 chainNetGalGal3,118 chainNetGalGal3,234 chainNetGalGal3,242 chainNetGalGal3,256 chainNetGalGal3,296 chainNetGalGal3,319 chainNetGalGal3,445 chainNetGalGal3,600 chainNetGalGal3,635 chainNetGalGal3,644 chainNetGalGal3,785 chainNetGalGal3,863 chainNetGalGal3,895 chainNetGalGal3,906 chainNetGalGal3,915 chainNetGalGal3,940 chainNetGalGal3,955 chainNetGalGal3,980 chainNetGalGal3,986 chainNetGalGal3,992 chainNetGalGal3,999 chainNetGalGal3,1005 chainNetGalGal3,1069 chainNetGalGal3,1074 chainNetGalGal3Viewchain,9 chainNetGalGal3Viewnet,9 chainNetGalVar1,14 chainNetGalVar1,109 chainNetGalVar1,124 chainNetGalVar1,242 chainNetGalVar1,250 chainNetGalVar1,264 chainNetGalVar1,306 chainNetGalVar1,330 chainNetGalVar1,456 chainNetGalVar1,613 chainNetGalVar1,650 chainNetGalVar1,659 chainNetGalVar1,800 chainNetGalVar1,878 chainNetGalVar1,910 chainNetGalVar1,921 chainNetGalVar1,930 chainNetGalVar1,955 chainNetGalVar1,970 chainNetGalVar1,995 chainNetGalVar1,1001 chainNetGalVar1,1007 chainNetGalVar1,1014 chainNetGalVar1,1020 chainNetGalVar1,1084 chainNetGalVar1,1089 chainNetGalVar1Viewchain,10 chainNetGalVar1Viewnet,10 chainNetHg19,10 chainNetHg19,101 chainNetHg19,116 chainNetHg19,232 chainNetHg19,240 chainNetHg19,254 chainNetHg19,294 chainNetHg19,316 chainNetHg19,442 chainNetHg19,597 chainNetHg19,632 chainNetHg19,641 chainNetHg19,782 chainNetHg19,860 chainNetHg19,892 chainNetHg19,903 chainNetHg19,912 chainNetHg19,937 chainNetHg19,952 chainNetHg19,977 chainNetHg19,983 chainNetHg19,989 chainNetHg19,996 chainNetHg19,1002 chainNetHg19,1066 chainNetHg19,1071 chainNetHg19Viewchain,8 chainNetHg19Viewnet,8 chainNetMm10,9 chainNetMm10,100 chainNetMm10,115 chainNetMm10,231 chainNetMm10,239 chainNetMm10,253 chainNetMm10,293 chainNetMm10,315 chainNetMm10,441 chainNetMm10,596 chainNetMm10,631 chainNetMm10,640 chainNetMm10,781 chainNetMm10,859 chainNetMm10,891 chainNetMm10,902 chainNetMm10,911 chainNetMm10,936 chainNetMm10,951 chainNetMm10,976 chainNetMm10,982 chainNetMm10,988 chainNetMm10,995 chainNetMm10,1001 chainNetMm10,1065 chainNetMm10,1070 chainNetMm10Viewchain,8 chainNetMm10Viewnet,8 chainNetMm39,10 chainNetMm39,101 chainNetMm39,116 chainNetMm39,232 chainNetMm39,240 chainNetMm39,254 chainNetMm39,294 chainNetMm39,316 chainNetMm39,442 chainNetMm39,597 chainNetMm39,632 chainNetMm39,641 chainNetMm39,782 chainNetMm39,860 chainNetMm39,892 chainNetMm39,903 chainNetMm39,912 chainNetMm39,937 chainNetMm39,952 chainNetMm39,977 chainNetMm39,983 chainNetMm39,989 chainNetMm39,996 chainNetMm39,1002 chainNetMm39,1066 chainNetMm39,1071 chainNetMm39Viewchain,8 chainNetMm39Viewnet,8 chainNetMonDom4,10 chainNetMonDom4,101 chainNetMonDom4,116 chainNetMonDom4,232 chainNetMonDom4,240 chainNetMonDom4,254 chainNetMonDom4,294 chainNetMonDom4,316 chainNetMonDom4,442 chainNetMonDom4,597 chainNetMonDom4,632 chainNetMonDom4,641 chainNetMonDom4,782 chainNetMonDom4,860 chainNetMonDom4,892 chainNetMonDom4,903 chainNetMonDom4,912 chainNetMonDom4,937 chainNetMonDom4,952 chainNetMonDom4,977 chainNetMonDom4,983 chainNetMonDom4,989 chainNetMonDom4,996 chainNetMonDom4,1002 chainNetMonDom4,1066 chainNetMonDom4,1071 chainNetMonDom4Viewchain,8 chainNetMonDom4Viewnet,8 chainNetOryCun2,10 chainNetOryCun2,101 chainNetOryCun2,116 chainNetOryCun2,232 chainNetOryCun2,240 chainNetOryCun2,254 chainNetOryCun2,294 chainNetOryCun2,316 chainNetOryCun2,442 chainNetOryCun2,597 chainNetOryCun2,632 chainNetOryCun2,641 chainNetOryCun2,782 chainNetOryCun2,860 chainNetOryCun2,892 chainNetOryCun2,903 chainNetOryCun2,912 chainNetOryCun2,937 chainNetOryCun2,952 chainNetOryCun2,977 chainNetOryCun2,983 chainNetOryCun2,989 chainNetOryCun2,996 chainNetOryCun2,1002 chainNetOryCun2,1066 chainNetOryCun2,1071 chainNetOryCun2Viewchain,8 chainNetOryCun2Viewnet,8 chainNetRn6,11 chainNetRn6,103 chainNetRn6,118 chainNetRn6,234 chainNetRn6,242 chainNetRn6,256 chainNetRn6,296 chainNetRn6,319 chainNetRn6,445 chainNetRn6,600 chainNetRn6,635 chainNetRn6,644 chainNetRn6,785 chainNetRn6,863 chainNetRn6,895 chainNetRn6,906 chainNetRn6,915 chainNetRn6,940 chainNetRn6,955 chainNetRn6,980 chainNetRn6,986 chainNetRn6,992 chainNetRn6,999 chainNetRn6,1005 chainNetRn6,1069 chainNetRn6,1074 chainNetRn6Viewchain,9 chainNetRn6Viewnet,9 chainOryCun2,98 chainOryCun2,113 chainOryCun2,229 chainOryCun2,237 chainOryCun2,251 chainOryCun2,291 chainOryCun2,313 chainOryCun2,439 chainOryCun2,594 chainOryCun2,629 chainOryCun2,638 chainOryCun2,779 chainOryCun2,857 chainOryCun2,889 chainOryCun2,900 chainOryCun2,909 chainOryCun2,934 chainOryCun2,949 chainOryCun2,974 chainOryCun2,980 chainOryCun2,986 chainOryCun2,993 chainOryCun2,999 chainOryCun2,1063 chainOryCun2,1068 chainRn6,100 chainRn6,115 chainRn6,231 chainRn6,239 chainRn6,253 chainRn6,293 chainRn6,316 chainRn6,442 chainRn6,597 chainRn6,632 chainRn6,641 chainRn6,782 chainRn6,860 chainRn6,892 chainRn6,903 chainRn6,912 chainRn6,937 chainRn6,952 chainRn6,977 chainRn6,983 chainRn6,989 chainRn6,996 chainRn6,1002 chainRn6,1066 chainRn6,1071 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 cytoBandIdeo,8 ensGene,6 ensGene,128 est,10 est,26 est,48 est,88 est,132 est,293 est,457 est,471 est,479 est,607 est,713 gap,5 gap,48 gap,70 gap,126 gap,135 gc5Base,9 gc5Base,22 gc5Base,74 genscan,7 genscan,30 genscan,40 genscan,46 genscan,63 genscan,83 genscan,97 genscan,108 genscan,119 genscan,138 genscan,147 gold,6 gold,43 gold,82 gold,96 gold,102 intronEst,11 intronEst,27 intronEst,88 intronEst,132 intronEst,169 intronEst,213 intronEst,374 intronEst,538 intronEst,552 intronEst,560 intronEst,688 intronEst,794 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,10 mrna,24 mrna,29 mrna,78 mrna,239 mrna,358 mrna,429 ncbiRefSeq,7 ncbiRefSeq,16 ncbiRefSeqCurated,14 ncbiRefSeqGenomicDiff,8 ncbiRefSeqGenomicDiff,13 ncbiRefSeqOther,16 ncbiRefSeqPredicted,12 ncbiRefSeqPsl,8 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netGalGal3,100 netGalGal3,115 netGalGal3,231 netGalGal3,239 netGalGal3,253 netGalGal3,293 netGalGal3,316 netGalGal3,442 netGalGal3,597 netGalGal3,632 netGalGal3,641 netGalGal3,782 netGalGal3,860 netGalGal3,892 netGalGal3,903 netGalGal3,912 netGalGal3,937 netGalGal3,952 netGalGal3,977 netGalGal3,983 netGalGal3,989 netGalGal3,996 netGalGal3,1002 netGalGal3,1066 netGalGal3,1071 netGalVar1,106 netGalVar1,121 netGalVar1,239 netGalVar1,247 netGalVar1,261 netGalVar1,303 netGalVar1,327 netGalVar1,453 netGalVar1,610 netGalVar1,647 netGalVar1,656 netGalVar1,797 netGalVar1,875 netGalVar1,907 netGalVar1,918 netGalVar1,927 netGalVar1,952 netGalVar1,967 netGalVar1,992 netGalVar1,998 netGalVar1,1004 netGalVar1,1011 netGalVar1,1017 netGalVar1,1081 netGalVar1,1086 netHg19,98 netHg19,113 netHg19,229 netHg19,237 netHg19,251 netHg19,291 netHg19,313 netHg19,439 netHg19,594 netHg19,629 netHg19,638 netHg19,779 netHg19,857 netHg19,889 netHg19,900 netHg19,909 netHg19,934 netHg19,949 netHg19,974 netHg19,980 netHg19,986 netHg19,993 netHg19,999 netHg19,1063 netHg19,1068 netMm10,98 netMm10,113 netMm10,229 netMm10,237 netMm10,251 netMm10,291 netMm10,313 netMm10,439 netMm10,594 netMm10,629 netMm10,638 netMm10,779 netMm10,857 netMm10,889 netMm10,900 netMm10,909 netMm10,934 netMm10,949 netMm10,974 netMm10,980 netMm10,986 netMm10,993 netMm10,999 netMm10,1063 netMm10,1068 netMm39,98 netMm39,113 netMm39,229 netMm39,237 netMm39,251 netMm39,291 netMm39,313 netMm39,439 netMm39,594 netMm39,629 netMm39,638 netMm39,779 netMm39,857 netMm39,889 netMm39,900 netMm39,909 netMm39,934 netMm39,949 netMm39,974 netMm39,980 netMm39,986 netMm39,993 netMm39,999 netMm39,1063 netMm39,1068 netMonDom4,98 netMonDom4,113 netMonDom4,229 netMonDom4,237 netMonDom4,251 netMonDom4,291 netMonDom4,313 netMonDom4,439 netMonDom4,594 netMonDom4,629 netMonDom4,638 netMonDom4,779 netMonDom4,857 netMonDom4,889 netMonDom4,900 netMonDom4,909 netMonDom4,934 netMonDom4,949 netMonDom4,974 netMonDom4,980 netMonDom4,986 netMonDom4,993 netMonDom4,999 netMonDom4,1063 netMonDom4,1068 netOryCun2,98 netOryCun2,113 netOryCun2,229 netOryCun2,237 netOryCun2,251 netOryCun2,291 netOryCun2,313 netOryCun2,439 netOryCun2,594 netOryCun2,629 netOryCun2,638 netOryCun2,779 netOryCun2,857 netOryCun2,889 netOryCun2,900 netOryCun2,909 netOryCun2,934 netOryCun2,949 netOryCun2,974 netOryCun2,980 netOryCun2,986 netOryCun2,993 netOryCun2,999 netOryCun2,1063 netOryCun2,1068 netRn6,100 netRn6,115 netRn6,231 netRn6,239 netRn6,253 netRn6,293 netRn6,316 netRn6,442 netRn6,597 netRn6,632 netRn6,641 netRn6,782 netRn6,860 netRn6,892 netRn6,903 netRn6,912 netRn6,937 netRn6,952 netRn6,977 netRn6,983 netRn6,989 netRn6,996 netRn6,1002 netRn6,1066 netRn6,1071 nscanGene,6 nscanGene,99 nscanGene,145 nscanGene,192 nscanGene,257 nscanGene,368 quality,9 quality,101 refGene,9 refGene,12 refGene,25 refGene,51 refGene,61 refGene,84 refGene,118 refGene,168 refGene,193 refGene,226 refGene,239 refGene,307 refGene,334 refGene,420 refSeqComposite,8 refSeqComposite,22 refSeqComposite,72 refSeqComposite,110 refSeqComposite,120 refSeqComposite,143 refSeqComposite,192 refSeqComposite,203 refSeqComposite,231 refSeqComposite,257 refSeqComposite,265 refSeqComposite,273 refSeqComposite,301 refSeqComposite,365 refSeqComposite,469 refSeqComposite,493 refSeqComposite,575 refSeqComposite,594 refSeqComposite,657 refSeqComposite,667 refSeqComposite,707 refSeqComposite,719 refSeqComposite,805 refSeqComposite,830 refSeqComposite,863 refSeqComposite,883 refSeqComposite,915 refSeqComposite,957 refSeqComposite,973 refSeqComposite,996 refSeqComposite,1011 refSeqComposite,1128 refSeqComposite,1147 refSeqComposite,1173 refSeqComposite,1178 refSeqComposite,1278 refSeqComposite,1373 refSeqComposite,1475 refSeqComposite,1493 refSeqComposite,1633 refSeqComposite,1674 refSeqComposite,1724 refSeqComposite,1810 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 tRNAs,10 tRNAs,33 tRNAs,75 tRNAs,103 tRNAs,175 tRNAs,209 tRNAs,316 tRNAs,331 transMapEnsemblV5,5 transMapEnsemblV5,11 transMapEnsemblV5,43 transMapEnsemblV5,94 transMapEnsemblV5,174 transMapEnsemblV5,199 transMapEnsemblV5,366 transMapEnsemblV5,368 transMapEnsemblV5,392 transMapEnsemblV5,409 transMapEnsemblV5,435 transMapEnsemblV5,466 transMapEnsemblV5,482 transMapEnsemblV5,497 transMapEnsemblV5,554 transMapEnsemblV5,639 transMapEnsemblV5,688 transMapEnsemblV5,702 transMapEnsemblV5,709 transMapEnsemblV5,767 transMapEstV5,9 transMapEstV5,63 transMapEstV5,143 transMapEstV5,168 transMapEstV5,335 transMapEstV5,337 transMapEstV5,361 transMapEstV5,378 transMapEstV5,404 transMapEstV5,435 transMapEstV5,451 transMapEstV5,466 transMapEstV5,523 transMapEstV5,608 transMapEstV5,657 transMapEstV5,671 transMapEstV5,678 transMapEstV5,736 transMapRefSeqV5,10 transMapRefSeqV5,63 transMapRefSeqV5,143 transMapRefSeqV5,168 transMapRefSeqV5,335 transMapRefSeqV5,337 transMapRefSeqV5,361 transMapRefSeqV5,378 transMapRefSeqV5,404 transMapRefSeqV5,435 transMapRefSeqV5,451 transMapRefSeqV5,466 transMapRefSeqV5,523 transMapRefSeqV5,608 transMapRefSeqV5,657 transMapRefSeqV5,671 transMapRefSeqV5,678 transMapRefSeqV5,736 transMapRnaV5,10 transMapRnaV5,63 transMapRnaV5,143 transMapRnaV5,168 transMapRnaV5,335 transMapRnaV5,337 transMapRnaV5,361 transMapRnaV5,378 transMapRnaV5,404 transMapRnaV5,435 transMapRnaV5,451 transMapRnaV5,466 transMapRnaV5,523 transMapRnaV5,608 transMapRnaV5,657 transMapRnaV5,671 transMapRnaV5,678 transMapRnaV5,736 transMapV5,8 transMapV5,16 transMapV5,74 transMapV5,88 transMapV5,139 transMapV5,162 transMapV5,169 transMapV5,249 transMapV5,274 transMapV5,441 transMapV5,443 transMapV5,467 transMapV5,484 transMapV5,510 transMapV5,541 transMapV5,557 transMapV5,572 transMapV5,629 transMapV5,714 transMapV5,763 transMapV5,777 transMapV5,784 transMapV5,842 ucscToRefSeq,6 unipAliSwissprot,19 unipAliTrembl,11 unipChain,9 unipConflict,7 unipDisulfBond,7 unipDomain,5 unipInterest,7 unipLocCytopl,6 unipLocExtra,6 unipLocSignal,7 unipLocTransMemb,6 unipModif,8 unipMut,7 unipOther,7 unipRepeat,5 unipStruct,9 uniprot,8 uniprot,17 uniprot,174 uniprot,329 uniprot,345 uniprot,355 uniprot,369 uniprot,378 uniprot,403 uniprot,433 uniprot,439 uniprot,448 uniprot,488 uniprot,517 uniprot,568 uniprot,589 uniprot,611 uniprot,617 uniprot,702 uniprot,761 uniprot,796 uniprot,866 uniprot,926 uniprot,939 uniprot,1122 uniprot,1214 uniprot,1310 uniprot,1342 uniprot,1375 uniprot,1420 uniprot,1465 uniprot,1498 uniprot,1598 uniprot,1617 uniprot,1650 uniprot,1691 uniprot,1790 uniprot,1898 uniprot,1958 uniprot,1970 uniprot,2028 uniprot,2036 windowmaskerSdust,10 xenoMrna,9 xenoMrna,20 xenoMrna,33 xenoMrna,152 xenoMrna,313 xenoMrna,432 xenoMrna,503 xenoRefGene,8 xenoRefGene,17 xenoRefGene,45 xenoRefGene,79 xenoRefGene,129 xenoRefGene,154 xenoRefGene,187 xenoRefGene,200 xenoRefGene,268 xenoRefGene,295 xenoRefGene,380 annot unipOther,2 annotate HLTOGAannotvHg38v1,100 annotated HLTOGAannotvHg38v1,133 refSeqComposite,558 rmsk,67 uniprot,736 uniprot,994 uniprot,1014 uniprot,1027 uniprot,1034 uniprot,1040 uniprot,1053 uniprot,1082 uniprot,1233 uniprot,1265 annotation HLTOGAannotvHg38v1,31 HLTOGAannotvHg38v1,48 HLTOGAannotvHg38v1,358 chainGalGal3,304 chainGalVar1,316 chainHg19,302 chainMm10,302 chainMm39,302 chainMonDom4,302 chainNetGalGal3,307 chainNetGalVar1,319 chainNetHg19,305 chainNetMm10,304 chainNetMm39,305 chainNetMonDom4,305 chainNetOryCun2,305 chainNetRn6,307 chainOryCun2,302 chainRn6,304 ensGene,165 netGalGal3,304 netGalVar1,316 netHg19,302 netMm10,302 netMm39,302 netMonDom4,302 netOryCun2,302 netRn6,304 nscanGene,211 nscanGene,318 nscanGene,373 refSeqComposite,67 refSeqComposite,668 refSeqComposite,1117 refSeqComposite,1146 refSeqComposite,1192 rmsk,38 transMapEnsemblV5,609 transMapEstV5,578 transMapRefSeqV5,578 transMapRnaV5,578 transMapV5,684 uniprot,143 uniprot,466 uniprot,487 uniprot,530 uniprot,605 uniprot,624 uniprot,1731 annotationonprotein uniprot,1929 annotations HLTOGAannotvHg38v1,5 ensGene,156 genscan,120 ncbiRefSeqOther,6 nestedRepeats,71 refGene,4 refGene,227 refSeqComposite,191 refSeqComposite,197 refSeqComposite,205 refSeqComposite,220 refSeqComposite,349 refSeqComposite,383 refSeqComposite,483 refSeqComposite,864 refSeqComposite,1471 refSeqComposite,1503 refSeqComposite,1539 tRNAs,99 transMapEnsemblV5,60 transMapEnsemblV5,542 transMapEnsemblV5,703 transMapEnsemblV5,711 transMapEstV5,511 transMapEstV5,672 transMapEstV5,680 transMapRefSeqV5,511 transMapRefSeqV5,672 transMapRefSeqV5,680 transMapRnaV5,511 transMapRnaV5,672 transMapRnaV5,680 transMapV5,76 transMapV5,617 transMapV5,778 transMapV5,786 unipOther,5 unipStruct,7 uniprot,6 uniprot,18 uniprot,54 uniprot,96 uniprot,128 uniprot,171 uniprot,212 uniprot,363 uniprot,394 uniprot,397 uniprot,455 uniprot,501 uniprot,595 uniprot,631 uniprot,662 uniprot,704 uniprot,718 uniprot,763 uniprot,1438 uniprot,1504 uniprot,1514 uniprot,1757 xenoRefGene,188 another refSeqComposite,327 transMapV5,81 any est,316 est,550 intronEst,397 intronEst,631 mrna,262 nscanGene,216 refSeqComposite,274 refSeqComposite,1356 uniprot,660 uniprot,1146 uniprot,1250 xenoMrna,336 anything tRNAs,118 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 ensGene,109 refSeqComposite,1312 refSeqComposite,1366 transMapEnsemblV5,566 transMapEstV5,535 transMapRefSeqV5,535 transMapRnaV5,535 transMapV5,641 appear tRNAs,326 appending transMapEnsemblV5,399 transMapEstV5,368 transMapRefSeqV5,368 transMapRnaV5,368 transMapV5,474 apply est,188 intronEst,269 mrna,134 xenoMrna,208 approach uniprot,1531 appropriate refGene,151 refSeqComposite,775 xenoRefGene,112 apr HLTOGAannotvHg38v1,366 chainNetOryCun2,5 chainNetOryCun2,69 chainNetOryCun2,309 chainNetOryCun2Viewchain,3 chainNetOryCun2Viewnet,3 chainOryCun2,4 chainOryCun2,66 chainOryCun2,306 est,811 genscan,224 intronEst,895 mrna,528 netOryCun2,4 netOryCun2,66 netOryCun2,306 refGene,352 refSeqComposite,1742 tRNAs,504 xenoMrna,602 xenoRefGene,312 apsects gc5Base,51 arabidopsis nscanGene,316 arbitrary nscanGene,72 refSeqComposite,941 archaea tRNAs,104 archive ensGene,142 refSeqComposite,1708 uniprot,893 uniprot,1670 uniprot,1908 archives refSeqComposite,1347 refSeqComposite,1692 uniprot,1832 are HLTOGAannotvHg38v1,204 HLTOGAannotvHg38v1,277 augustusGene,27 chainGalGal3,22 chainGalGal3,41 chainGalGal3,54 chainGalGal3,144 chainGalGal3,214 chainGalGal3,225 chainGalGal3,327 chainGalGal3,396 chainGalGal3,417 chainGalGal3,424 chainGalGal3,507 chainGalGal3,698 chainGalVar1,25 chainGalVar1,44 chainGalVar1,57 chainGalVar1,150 chainGalVar1,222 chainGalVar1,233 chainGalVar1,338 chainGalVar1,407 chainGalVar1,428 chainGalVar1,435 chainGalVar1,518 chainGalVar1,713 chainHg19,21 chainHg19,40 chainHg19,53 chainHg19,142 chainHg19,212 chainHg19,223 chainHg19,324 chainHg19,393 chainHg19,414 chainHg19,421 chainHg19,504 chainHg19,695 chainMm10,21 chainMm10,40 chainMm10,53 chainMm10,142 chainMm10,212 chainMm10,223 chainMm10,324 chainMm10,393 chainMm10,414 chainMm10,421 chainMm10,504 chainMm10,695 chainMm39,21 chainMm39,40 chainMm39,53 chainMm39,142 chainMm39,212 chainMm39,223 chainMm39,324 chainMm39,393 chainMm39,414 chainMm39,421 chainMm39,504 chainMm39,695 chainMonDom4,21 chainMonDom4,40 chainMonDom4,53 chainMonDom4,142 chainMonDom4,212 chainMonDom4,223 chainMonDom4,324 chainMonDom4,393 chainMonDom4,414 chainMonDom4,421 chainMonDom4,504 chainMonDom4,695 chainNetGalGal3,25 chainNetGalGal3,44 chainNetGalGal3,57 chainNetGalGal3,147 chainNetGalGal3,217 chainNetGalGal3,228 chainNetGalGal3,330 chainNetGalGal3,399 chainNetGalGal3,420 chainNetGalGal3,427 chainNetGalGal3,510 chainNetGalGal3,701 chainNetGalVar1,28 chainNetGalVar1,47 chainNetGalVar1,60 chainNetGalVar1,153 chainNetGalVar1,225 chainNetGalVar1,236 chainNetGalVar1,341 chainNetGalVar1,410 chainNetGalVar1,431 chainNetGalVar1,438 chainNetGalVar1,521 chainNetGalVar1,716 chainNetHg19,24 chainNetHg19,43 chainNetHg19,56 chainNetHg19,145 chainNetHg19,215 chainNetHg19,226 chainNetHg19,327 chainNetHg19,396 chainNetHg19,417 chainNetHg19,424 chainNetHg19,507 chainNetHg19,698 chainNetMm10,23 chainNetMm10,42 chainNetMm10,55 chainNetMm10,144 chainNetMm10,214 chainNetMm10,225 chainNetMm10,326 chainNetMm10,395 chainNetMm10,416 chainNetMm10,423 chainNetMm10,506 chainNetMm10,697 chainNetMm39,24 chainNetMm39,43 chainNetMm39,56 chainNetMm39,145 chainNetMm39,215 chainNetMm39,226 chainNetMm39,327 chainNetMm39,396 chainNetMm39,417 chainNetMm39,424 chainNetMm39,507 chainNetMm39,698 chainNetMonDom4,24 chainNetMonDom4,43 chainNetMonDom4,56 chainNetMonDom4,145 chainNetMonDom4,215 chainNetMonDom4,226 chainNetMonDom4,327 chainNetMonDom4,396 chainNetMonDom4,417 chainNetMonDom4,424 chainNetMonDom4,507 chainNetMonDom4,698 chainNetOryCun2,24 chainNetOryCun2,43 chainNetOryCun2,56 chainNetOryCun2,145 chainNetOryCun2,215 chainNetOryCun2,226 chainNetOryCun2,327 chainNetOryCun2,396 chainNetOryCun2,417 chainNetOryCun2,424 chainNetOryCun2,507 chainNetOryCun2,698 chainNetRn6,25 chainNetRn6,44 chainNetRn6,57 chainNetRn6,147 chainNetRn6,217 chainNetRn6,228 chainNetRn6,330 chainNetRn6,399 chainNetRn6,420 chainNetRn6,427 chainNetRn6,510 chainNetRn6,701 chainOryCun2,21 chainOryCun2,40 chainOryCun2,53 chainOryCun2,142 chainOryCun2,212 chainOryCun2,223 chainOryCun2,324 chainOryCun2,393 chainOryCun2,414 chainOryCun2,421 chainOryCun2,504 chainOryCun2,695 chainRn6,22 chainRn6,41 chainRn6,54 chainRn6,144 chainRn6,214 chainRn6,225 chainRn6,327 chainRn6,396 chainRn6,417 chainRn6,424 chainRn6,507 chainRn6,698 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ensGene,81 ensGene,121 est,30 est,67 est,149 est,159 gap,36 gap,104 gap,149 genscan,25 genscan,160 gold,51 gold,74 gold,91 gold,131 intronEst,41 intronEst,230 intronEst,240 intronEst,804 microsat,16 microsat,25 microsat,52 mrna,48 mrna,95 mrna,105 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netGalGal3,22 netGalGal3,41 netGalGal3,54 netGalGal3,144 netGalGal3,214 netGalGal3,225 netGalGal3,327 netGalGal3,396 netGalGal3,417 netGalGal3,424 netGalGal3,507 netGalGal3,698 netGalVar1,25 netGalVar1,44 netGalVar1,57 netGalVar1,150 netGalVar1,222 netGalVar1,233 netGalVar1,338 netGalVar1,407 netGalVar1,428 netGalVar1,435 netGalVar1,518 netGalVar1,713 netHg19,21 netHg19,40 netHg19,53 netHg19,142 netHg19,212 netHg19,223 netHg19,324 netHg19,393 netHg19,414 netHg19,421 netHg19,504 netHg19,695 netMm10,21 netMm10,40 netMm10,53 netMm10,142 netMm10,212 netMm10,223 netMm10,324 netMm10,393 netMm10,414 netMm10,421 netMm10,504 netMm10,695 netMm39,21 netMm39,40 netMm39,53 netMm39,142 netMm39,212 netMm39,223 netMm39,324 netMm39,393 netMm39,414 netMm39,421 netMm39,504 netMm39,695 netMonDom4,21 netMonDom4,40 netMonDom4,53 netMonDom4,142 netMonDom4,212 netMonDom4,223 netMonDom4,324 netMonDom4,393 netMonDom4,414 netMonDom4,421 netMonDom4,504 netMonDom4,695 netOryCun2,21 netOryCun2,40 netOryCun2,53 netOryCun2,142 netOryCun2,212 netOryCun2,223 netOryCun2,324 netOryCun2,393 netOryCun2,414 netOryCun2,421 netOryCun2,504 netOryCun2,695 netRn6,22 netRn6,41 netRn6,54 netRn6,144 netRn6,214 netRn6,225 netRn6,327 netRn6,396 netRn6,417 netRn6,424 netRn6,507 netRn6,698 nscanGene,132 nscanGene,176 refGene,42 refGene,144 refGene,242 refSeqComposite,180 refSeqComposite,233 refSeqComposite,407 refSeqComposite,428 refSeqComposite,768 refSeqComposite,893 refSeqComposite,935 refSeqComposite,999 refSeqComposite,1026 refSeqComposite,1343 refSeqComposite,1377 refSeqComposite,1400 refSeqComposite,1478 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 tRNAs,105 tRNAs,168 tRNAs,190 tRNAs,202 tRNAs,262 tRNAs,266 tRNAs,292 tRNAs,297 tRNAs,333 transMapEnsemblV5,55 transMapEnsemblV5,73 transMapEnsemblV5,454 transMapEnsemblV5,461 transMapEnsemblV5,470 transMapEnsemblV5,504 transMapEnsemblV5,514 transMapEnsemblV5,543 transMapEnsemblV5,582 transMapEstV5,42 transMapEstV5,423 transMapEstV5,430 transMapEstV5,439 transMapEstV5,473 transMapEstV5,483 transMapEstV5,512 transMapEstV5,551 transMapRefSeqV5,42 transMapRefSeqV5,423 transMapRefSeqV5,430 transMapRefSeqV5,439 transMapRefSeqV5,473 transMapRefSeqV5,483 transMapRefSeqV5,512 transMapRefSeqV5,551 transMapRnaV5,42 transMapRnaV5,423 transMapRnaV5,430 transMapRnaV5,439 transMapRnaV5,473 transMapRnaV5,483 transMapRnaV5,512 transMapRnaV5,551 transMapV5,41 transMapV5,69 transMapV5,529 transMapV5,536 transMapV5,545 transMapV5,579 transMapV5,589 transMapV5,618 transMapV5,657 uniprot,55 uniprot,93 uniprot,124 uniprot,146 uniprot,165 uniprot,175 uniprot,208 uniprot,456 uniprot,502 uniprot,555 uniprot,579 uniprot,596 uniprot,644 uniprot,679 uniprot,735 uniprot,868 uniprot,880 uniprot,1006 uniprot,1013 uniprot,1033 uniprot,1061 uniprot,1086 uniprot,1117 uniprot,1149 uniprot,1318 uniprot,1350 uniprot,1425 uniprot,1433 uniprot,1454 uniprot,1659 uniprot,1867 uniprot,1895 xenoMrna,52 xenoMrna,118 xenoMrna,169 xenoMrna,179 xenoRefGene,40 xenoRefGene,105 xenoRefGene,203 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5Base,37 arian chainGalGal3,950 chainGalVar1,965 chainHg19,947 chainMm10,947 chainMm39,947 chainMonDom4,947 chainNetGalGal3,953 chainNetGalVar1,968 chainNetHg19,950 chainNetMm10,949 chainNetMm39,950 chainNetMonDom4,950 chainNetOryCun2,950 chainNetRn6,953 chainOryCun2,947 chainRn6,950 nestedRepeats,305 netGalGal3,950 netGalVar1,965 netHg19,947 netMm10,947 netMm39,947 netMonDom4,947 netOryCun2,947 netRn6,950 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 articles refSeqComposite,1105 tRNAs,365 as HLTOGAannotvHg38v1,9 HLTOGAannotvHg38v1,37 HLTOGAannotvHg38v1,42 HLTOGAannotvHg38v1,141 HLTOGAannotvHg38v1,199 HLTOGAannotvHg38v1,259 augustusGene,77 augustusGene,79 chainGalGal3,469 chainGalGal3,509 chainGalGal3,532 chainGalGal3,547 chainGalGal3,809 chainGalGal3,864 chainGalGal3,922 chainGalVar1,480 chainGalVar1,520 chainGalVar1,543 chainGalVar1,558 chainGalVar1,824 chainGalVar1,879 chainGalVar1,937 chainHg19,466 chainHg19,506 chainHg19,529 chainHg19,544 chainHg19,806 chainHg19,861 chainHg19,919 chainMm10,466 chainMm10,506 chainMm10,529 chainMm10,544 chainMm10,806 chainMm10,861 chainMm10,919 chainMm39,466 chainMm39,506 chainMm39,529 chainMm39,544 chainMm39,806 chainMm39,861 chainMm39,919 chainMonDom4,466 chainMonDom4,506 chainMonDom4,529 chainMonDom4,544 chainMonDom4,806 chainMonDom4,861 chainMonDom4,919 chainNetGalGal3,472 chainNetGalGal3,512 chainNetGalGal3,535 chainNetGalGal3,550 chainNetGalGal3,812 chainNetGalGal3,867 chainNetGalGal3,925 chainNetGalVar1,483 chainNetGalVar1,523 chainNetGalVar1,546 chainNetGalVar1,561 chainNetGalVar1,827 chainNetGalVar1,882 chainNetGalVar1,940 chainNetHg19,469 chainNetHg19,509 chainNetHg19,532 chainNetHg19,547 chainNetHg19,809 chainNetHg19,864 chainNetHg19,922 chainNetMm10,468 chainNetMm10,508 chainNetMm10,531 chainNetMm10,546 chainNetMm10,808 chainNetMm10,863 chainNetMm10,921 chainNetMm39,469 chainNetMm39,509 chainNetMm39,532 chainNetMm39,547 chainNetMm39,809 chainNetMm39,864 chainNetMm39,922 chainNetMonDom4,469 chainNetMonDom4,509 chainNetMonDom4,532 chainNetMonDom4,547 chainNetMonDom4,809 chainNetMonDom4,864 chainNetMonDom4,922 chainNetOryCun2,469 chainNetOryCun2,509 chainNetOryCun2,532 chainNetOryCun2,547 chainNetOryCun2,809 chainNetOryCun2,864 chainNetOryCun2,922 chainNetRn6,472 chainNetRn6,512 chainNetRn6,535 chainNetRn6,550 chainNetRn6,812 chainNetRn6,867 chainNetRn6,925 chainOryCun2,466 chainOryCun2,506 chainOryCun2,529 chainOryCun2,544 chainOryCun2,806 chainOryCun2,861 chainOryCun2,919 chainRn6,469 chainRn6,509 chainRn6,532 chainRn6,547 chainRn6,809 chainRn6,864 chainRn6,922 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 ensGene,87 est,597 gap,38 genscan,35 genscan,37 gold,36 intronEst,678 microsat,21 nestedRepeats,125 netGalGal3,469 netGalGal3,509 netGalGal3,532 netGalGal3,547 netGalGal3,809 netGalGal3,864 netGalGal3,922 netGalVar1,480 netGalVar1,520 netGalVar1,543 netGalVar1,558 netGalVar1,824 netGalVar1,879 netGalVar1,937 netHg19,466 netHg19,506 netHg19,529 netHg19,544 netHg19,806 netHg19,861 netHg19,919 netMm10,466 netMm10,506 netMm10,529 netMm10,544 netMm10,806 netMm10,861 netMm10,919 netMm39,466 netMm39,506 netMm39,529 netMm39,544 netMm39,806 netMm39,861 netMm39,919 netMonDom4,466 netMonDom4,506 netMonDom4,529 netMonDom4,544 netMonDom4,806 netMonDom4,861 netMonDom4,919 netOryCun2,466 netOryCun2,506 netOryCun2,529 netOryCun2,544 netOryCun2,806 netOryCun2,861 netOryCun2,919 netRn6,469 netRn6,509 netRn6,532 netRn6,547 netRn6,809 netRn6,864 netRn6,922 nscanGene,77 nscanGene,79 nscanGene,111 quality,91 refSeqComposite,414 refSeqComposite,506 refSeqComposite,526 refSeqComposite,539 refSeqComposite,626 refSeqComposite,894 refSeqComposite,1223 refSeqComposite,1405 refSeqComposite,1521 refSeqComposite,1641 rmsk,53 rmsk,55 tRNAs,42 tRNAs,288 transMapEnsemblV5,65 transMapEnsemblV5,188 transMapEnsemblV5,215 transMapEnsemblV5,227 transMapEnsemblV5,516 transMapEnsemblV5,627 transMapEstV5,157 transMapEstV5,184 transMapEstV5,196 transMapEstV5,485 transMapEstV5,596 transMapRefSeqV5,157 transMapRefSeqV5,184 transMapRefSeqV5,196 transMapRefSeqV5,485 transMapRefSeqV5,596 transMapRnaV5,157 transMapRnaV5,184 transMapRnaV5,196 transMapRnaV5,485 transMapRnaV5,596 transMapV5,263 transMapV5,290 transMapV5,302 transMapV5,591 transMapV5,702 uniprot,307 uniprot,598 uniprot,600 uniprot,621 uniprot,1100 uniprot,1778 windowmaskerSdust,18 xenoMrna,125 xenoMrna,130 ascii uniprot,1762 ask refGene,64 refSeqComposite,123 aspect refSeqComposite,709 aspects quality,67 assembled gold,24 assemblies augustusGene,196 augustusGene,237 chainGalGal3,326 chainGalGal3,589 chainGalVar1,337 chainGalVar1,602 chainHg19,323 chainHg19,586 chainMm10,323 chainMm10,586 chainMm39,323 chainMm39,586 chainMonDom4,323 chainMonDom4,586 chainNetGalGal3,329 chainNetGalGal3,592 chainNetGalVar1,340 chainNetGalVar1,605 chainNetHg19,326 chainNetHg19,589 chainNetMm10,325 chainNetMm10,588 chainNetMm39,326 chainNetMm39,589 chainNetMonDom4,326 chainNetMonDom4,589 chainNetOryCun2,326 chainNetOryCun2,589 chainNetRn6,329 chainNetRn6,592 chainOryCun2,323 chainOryCun2,586 chainRn6,326 chainRn6,589 netGalGal3,326 netGalGal3,589 netGalVar1,337 netGalVar1,602 netHg19,323 netHg19,586 netMm10,323 netMm10,586 netMm39,323 netMm39,586 netMonDom4,323 netMonDom4,586 netOryCun2,323 netOryCun2,586 netRn6,326 netRn6,589 nscanGene,323 refSeqComposite,184 rmsk,107 transMapEnsemblV5,193 transMapEstV5,162 transMapRefSeqV5,162 transMapRnaV5,162 transMapV5,268 assembly HLTOGAannotvHg38v1,209 augustusGene,197 chainGalGal3,153 chainGalGal3,161 chainGalGal3,313 chainGalVar1,161 chainGalVar1,169 chainGalVar1,324 chainHg19,151 chainHg19,159 chainHg19,310 chainMm10,151 chainMm10,159 chainMm10,310 chainMm39,151 chainMm39,159 chainMm39,310 chainMonDom4,151 chainMonDom4,159 chainMonDom4,310 chainNetGalGal3,156 chainNetGalGal3,164 chainNetGalGal3,316 chainNetGalVar1,164 chainNetGalVar1,172 chainNetGalVar1,327 chainNetHg19,154 chainNetHg19,162 chainNetHg19,313 chainNetMm10,153 chainNetMm10,161 chainNetMm10,312 chainNetMm39,154 chainNetMm39,162 chainNetMm39,313 chainNetMonDom4,154 chainNetMonDom4,162 chainNetMonDom4,313 chainNetOryCun2,154 chainNetOryCun2,162 chainNetOryCun2,313 chainNetRn6,156 chainNetRn6,164 chainNetRn6,316 chainOryCun2,151 chainOryCun2,159 chainOryCun2,310 chainRn6,153 chainRn6,161 chainRn6,313 gap,14 gap,84 gap,113 gold,1 gold,2 gold,14 netGalGal3,153 netGalGal3,161 netGalGal3,313 netGalVar1,161 netGalVar1,169 netGalVar1,324 netHg19,151 netHg19,159 netHg19,310 netMm10,151 netMm10,159 netMm10,310 netMm39,151 netMm39,159 netMm39,310 netMonDom4,151 netMonDom4,159 netMonDom4,310 netOryCun2,151 netOryCun2,159 netOryCun2,310 netRn6,153 netRn6,161 netRn6,313 quality,26 quality,97 refSeqComposite,371 refSeqComposite,479 transMapV5,106 transMapV5,124 transMapV5,135 ucscToRefSeq,34 uniprot,445 uniprot,701 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assessing refSeqComposite,653 assigned transMapEnsemblV5,462 transMapEstV5,431 transMapRefSeqV5,431 transMapRnaV5,431 transMapV5,537 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 est,110 gc5Base,34 intronEst,191 refSeqComposite,1401 rmsk,224 simpleRepeat,51 transMapEnsemblV5,583 transMapEstV5,552 transMapRefSeqV5,552 transMapRnaV5,552 transMapV5,658 uniprot,787 associates ucscToRefSeq,11 association refSeqComposite,685 astashyn refGene,368 refSeqComposite,1758 xenoRefGene,328 at HLTOGAannotvHg38v1,362 blastHg18KG,127 chainGalGal3,426 chainGalGal3,804 chainGalGal3,926 chainGalGal3,961 chainGalGal3,966 chainGalGal3,1007 chainGalVar1,437 chainGalVar1,819 chainGalVar1,941 chainGalVar1,976 chainGalVar1,981 chainGalVar1,1022 chainHg19,423 chainHg19,801 chainHg19,923 chainHg19,958 chainHg19,963 chainHg19,1004 chainMm10,423 chainMm10,801 chainMm10,923 chainMm10,958 chainMm10,963 chainMm10,1004 chainMm39,423 chainMm39,801 chainMm39,923 chainMm39,958 chainMm39,963 chainMm39,1004 chainMonDom4,423 chainMonDom4,801 chainMonDom4,923 chainMonDom4,958 chainMonDom4,963 chainMonDom4,1004 chainNetGalGal3,429 chainNetGalGal3,807 chainNetGalGal3,929 chainNetGalGal3,964 chainNetGalGal3,969 chainNetGalGal3,1010 chainNetGalVar1,440 chainNetGalVar1,822 chainNetGalVar1,944 chainNetGalVar1,979 chainNetGalVar1,984 chainNetGalVar1,1025 chainNetHg19,426 chainNetHg19,804 chainNetHg19,926 chainNetHg19,961 chainNetHg19,966 chainNetHg19,1007 chainNetMm10,425 chainNetMm10,803 chainNetMm10,925 chainNetMm10,960 chainNetMm10,965 chainNetMm10,1006 chainNetMm39,426 chainNetMm39,804 chainNetMm39,926 chainNetMm39,961 chainNetMm39,966 chainNetMm39,1007 chainNetMonDom4,426 chainNetMonDom4,804 chainNetMonDom4,926 chainNetMonDom4,961 chainNetMonDom4,966 chainNetMonDom4,1007 chainNetOryCun2,426 chainNetOryCun2,804 chainNetOryCun2,926 chainNetOryCun2,961 chainNetOryCun2,966 chainNetOryCun2,1007 chainNetRn6,429 chainNetRn6,807 chainNetRn6,929 chainNetRn6,964 chainNetRn6,969 chainNetRn6,1010 chainOryCun2,423 chainOryCun2,801 chainOryCun2,923 chainOryCun2,958 chainOryCun2,963 chainOryCun2,1004 chainRn6,426 chainRn6,804 chainRn6,926 chainRn6,961 chainRn6,966 chainRn6,1007 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 est,265 est,549 est,594 est,714 est,730 intronEst,67 intronEst,82 intronEst,107 intronEst,346 intronEst,630 intronEst,675 intronEst,795 intronEst,814 microsat,28 microsat,77 mrna,211 mrna,430 mrna,447 netGalGal3,426 netGalGal3,804 netGalGal3,926 netGalGal3,961 netGalGal3,966 netGalGal3,1007 netGalVar1,437 netGalVar1,819 netGalVar1,941 netGalVar1,976 netGalVar1,981 netGalVar1,1022 netHg19,423 netHg19,801 netHg19,923 netHg19,958 netHg19,963 netHg19,1004 netMm10,423 netMm10,801 netMm10,923 netMm10,958 netMm10,963 netMm10,1004 netMm39,423 netMm39,801 netMm39,923 netMm39,958 netMm39,963 netMm39,1004 netMonDom4,423 netMonDom4,801 netMonDom4,923 netMonDom4,958 netMonDom4,963 netMonDom4,1004 netOryCun2,423 netOryCun2,801 netOryCun2,923 netOryCun2,958 netOryCun2,963 netOryCun2,1004 netRn6,426 netRn6,804 netRn6,926 netRn6,961 netRn6,966 netRn6,1007 nscanGene,28 nscanGene,234 nscanGene,261 quality,29 refGene,132 refGene,308 refGene,324 refSeqComposite,735 refSeqComposite,1050 refSeqComposite,1154 refSeqComposite,1279 refSeqComposite,1716 rmsk,243 rmsk,267 tRNAs,107 tRNAs,339 transMapEnsemblV5,295 transMapEnsemblV5,684 transMapEstV5,264 transMapEstV5,653 transMapRefSeqV5,264 transMapRefSeqV5,653 transMapRnaV5,264 transMapRnaV5,653 transMapV5,118 transMapV5,370 transMapV5,759 uniprot,825 uniprot,1946 uniprot,1991 xenoMrna,285 xenoMrna,504 xenoMrna,521 xenoRefGene,93 xenoRefGene,269 xenoRefGene,285 attempt est,581 intronEst,662 atypical tRNAs,274 aug tRNAs,433 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 uniprot,835 uniprot,867 auml windowmaskerSdust,95 austria nscanGene,268 automated transMapEnsemblV5,539 transMapEstV5,508 transMapRefSeqV5,508 transMapRnaV5,508 transMapV5,614 uniprot,1468 uniprot,1727 automatically uniprot,1565 av uniprot,2015 available HLTOGAannotvHg38v1,329 augustusGene,239 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 ensGene,82 ensGene,122 nestedRepeats,259 nestedRepeats,276 refSeqComposite,181 refSeqComposite,277 refSeqComposite,476 refSeqComposite,569 refSeqComposite,654 refSeqComposite,1344 refSeqComposite,1596 rmsk,73 tRNAs,106 transMapEnsemblV5,189 transMapEnsemblV5,247 transMapEstV5,158 transMapEstV5,216 transMapRefSeqV5,158 transMapRefSeqV5,216 transMapRnaV5,158 transMapRnaV5,216 transMapV5,264 transMapV5,322 uniprot,881 uniprot,1660 uniprot,1981 windowmaskerSdust,40 average nestedRepeats,186 nestedRepeats,221 averaged quality,52 aw HLTOGAannotvHg38v1,349 aware uniprot,1456 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainGalGal3,610 chainGalGal3,617 chainGalVar1,623 chainGalVar1,630 chainHg19,607 chainHg19,614 chainMm10,607 chainMm10,614 chainMm39,607 chainMm39,614 chainMonDom4,607 chainMonDom4,614 chainNetGalGal3,613 chainNetGalGal3,620 chainNetGalVar1,626 chainNetGalVar1,633 chainNetHg19,610 chainNetHg19,617 chainNetMm10,609 chainNetMm10,616 chainNetMm39,610 chainNetMm39,617 chainNetMonDom4,610 chainNetMonDom4,617 chainNetOryCun2,610 chainNetOryCun2,617 chainNetRn6,613 chainNetRn6,620 chainOryCun2,607 chainOryCun2,614 chainRn6,610 chainRn6,617 netGalGal3,610 netGalGal3,617 netGalVar1,623 netGalVar1,630 netHg19,607 netHg19,614 netMm10,607 netMm10,614 netMm39,607 netMm39,614 netMonDom4,607 netMonDom4,614 netOryCun2,607 netOryCun2,614 netRn6,610 netRn6,617 axtchain chainGalGal3,622 chainGalGal3,709 chainGalGal3,957 chainGalVar1,635 chainGalVar1,724 chainGalVar1,972 chainHg19,619 chainHg19,706 chainHg19,954 chainMm10,619 chainMm10,706 chainMm10,954 chainMm39,619 chainMm39,706 chainMm39,954 chainMonDom4,619 chainMonDom4,706 chainMonDom4,954 chainNetGalGal3,625 chainNetGalGal3,712 chainNetGalGal3,960 chainNetGalVar1,638 chainNetGalVar1,727 chainNetGalVar1,975 chainNetHg19,622 chainNetHg19,709 chainNetHg19,957 chainNetMm10,621 chainNetMm10,708 chainNetMm10,956 chainNetMm39,622 chainNetMm39,709 chainNetMm39,957 chainNetMonDom4,622 chainNetMonDom4,709 chainNetMonDom4,957 chainNetOryCun2,622 chainNetOryCun2,709 chainNetOryCun2,957 chainNetRn6,625 chainNetRn6,712 chainNetRn6,960 chainOryCun2,619 chainOryCun2,706 chainOryCun2,954 chainRn6,622 chainRn6,709 chainRn6,957 netGalGal3,622 netGalGal3,709 netGalGal3,957 netGalVar1,635 netGalVar1,724 netGalVar1,972 netHg19,619 netHg19,706 netHg19,954 netMm10,619 netMm10,706 netMm10,954 netMm39,619 netMm39,706 netMm39,954 netMonDom4,619 netMonDom4,706 netMonDom4,954 netOryCun2,619 netOryCun2,706 netOryCun2,954 netRn6,622 netRn6,709 netRn6,957 b tRNAs,36 transMapEnsemblV5,720 transMapEnsemblV5,730 transMapEstV5,689 transMapEstV5,699 transMapRefSeqV5,689 transMapRefSeqV5,699 transMapRnaV5,689 transMapRnaV5,699 transMapV5,795 transMapV5,805 back chainGalGal3,602 chainGalVar1,615 chainHg19,599 chainMm10,599 chainMm39,599 chainMonDom4,599 chainNetGalGal3,605 chainNetGalVar1,618 chainNetHg19,602 chainNetMm10,601 chainNetMm39,602 chainNetMonDom4,602 chainNetOryCun2,602 chainNetRn6,605 chainOryCun2,599 chainRn6,602 netGalGal3,602 netGalVar1,615 netHg19,599 netMm10,599 netMm39,599 netMonDom4,599 netOryCun2,599 netRn6,602 bacteria tRNAs,102 baertsch augustusGene,290 chainGalGal3,995 chainGalGal3,1053 chainGalGal3,1099 chainGalVar1,1010 chainGalVar1,1068 chainGalVar1,1114 chainHg19,992 chainHg19,1050 chainHg19,1096 chainMm10,992 chainMm10,1050 chainMm10,1096 chainMm39,992 chainMm39,1050 chainMm39,1096 chainMonDom4,992 chainMonDom4,1050 chainMonDom4,1096 chainNetGalGal3,998 chainNetGalGal3,1056 chainNetGalGal3,1102 chainNetGalVar1,1013 chainNetGalVar1,1071 chainNetGalVar1,1117 chainNetHg19,995 chainNetHg19,1053 chainNetHg19,1099 chainNetMm10,994 chainNetMm10,1052 chainNetMm10,1098 chainNetMm39,995 chainNetMm39,1053 chainNetMm39,1099 chainNetMonDom4,995 chainNetMonDom4,1053 chainNetMonDom4,1099 chainNetOryCun2,995 chainNetOryCun2,1053 chainNetOryCun2,1099 chainNetRn6,998 chainNetRn6,1056 chainNetRn6,1102 chainOryCun2,992 chainOryCun2,1050 chainOryCun2,1096 chainRn6,995 chainRn6,1053 chainRn6,1099 netGalGal3,995 netGalGal3,1053 netGalGal3,1099 netGalVar1,1010 netGalVar1,1068 netGalVar1,1114 netHg19,992 netHg19,1050 netHg19,1096 netMm10,992 netMm10,1050 netMm10,1096 netMm39,992 netMm39,1050 netMm39,1096 netMonDom4,992 netMonDom4,1050 netMonDom4,1096 netOryCun2,992 netOryCun2,1050 netOryCun2,1096 netRn6,995 netRn6,1053 netRn6,1099 transMapEnsemblV5,761 transMapEstV5,730 transMapRefSeqV5,730 transMapRnaV5,730 transMapV5,836 bairoch uniprot,2022 band cytoBandIdeo,2 baren nscanGene,361 barker ensGene,170 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 est,386 est,420 est,697 est,705 est,717 intronEst,467 intronEst,501 intronEst,778 intronEst,786 intronEst,798 mrna,359 mrna,413 mrna,421 mrna,433 quality,23 quality,40 refGene,291 refGene,299 refGene,311 refSeqComposite,1262 refSeqComposite,1270 refSeqComposite,1282 rmsk,217 rmsk,219 rmsk,222 xenoMrna,433 xenoMrna,486 xenoMrna,495 xenoMrna,507 xenoRefGene,252 xenoRefGene,260 xenoRefGene,272 base-level transMapEnsemblV5,321 transMapEstV5,290 transMapRefSeqV5,290 transMapRnaV5,290 transMapV5,396 based augustusGene,28 chainGalGal3,329 chainGalGal3,355 chainGalVar1,340 chainGalVar1,366 chainHg19,326 chainHg19,352 chainMm10,326 chainMm10,352 chainMm39,326 chainMm39,352 chainMonDom4,326 chainMonDom4,352 chainNetGalGal3,332 chainNetGalGal3,358 chainNetGalVar1,343 chainNetGalVar1,369 chainNetHg19,329 chainNetHg19,355 chainNetMm10,328 chainNetMm10,354 chainNetMm39,329 chainNetMm39,355 chainNetMonDom4,329 chainNetMonDom4,355 chainNetOryCun2,329 chainNetOryCun2,355 chainNetRn6,332 chainNetRn6,358 chainOryCun2,326 chainOryCun2,352 chainRn6,329 chainRn6,355 genscan,26 gold,52 netGalGal3,329 netGalGal3,355 netGalVar1,340 netGalVar1,366 netHg19,326 netHg19,352 netMm10,326 netMm10,352 netMm39,326 netMm39,352 netMonDom4,326 netMonDom4,352 netOryCun2,326 netOryCun2,352 netRn6,329 netRn6,355 refSeqComposite,252 refSeqComposite,360 tRNAs,268 uniprot,60 uniprot,727 uniprot,1604 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 est,36 est,397 est,670 gc5Base,25 intronEst,47 intronEst,85 intronEst,478 intronEst,751 refSeqComposite,901 transMapV5,166 basic blastHg18KG,165 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 uniprot,1570 bc149621.1 transMapEnsemblV5,459 transMapEstV5,428 transMapRefSeqV5,428 transMapRnaV5,428 transMapV5,534 bc149621.1-1 transMapEnsemblV5,465 transMapEnsemblV5,476 transMapEstV5,434 transMapEstV5,445 transMapRefSeqV5,434 transMapRefSeqV5,445 transMapRnaV5,434 transMapRnaV5,445 transMapV5,540 transMapV5,551 bc149621.1-1.1 transMapEnsemblV5,487 transMapEstV5,456 transMapRefSeqV5,456 transMapRnaV5,456 transMapV5,562 bc149621.1-2 transMapEnsemblV5,467 transMapEnsemblV5,489 transMapEstV5,436 transMapEstV5,458 transMapRefSeqV5,436 transMapRefSeqV5,458 transMapRnaV5,436 transMapRnaV5,458 transMapV5,542 transMapV5,564 bc149621.1-2.1 transMapEnsemblV5,496 transMapEstV5,465 transMapRefSeqV5,465 transMapRnaV5,465 transMapV5,571 bc149621.1-2.2 transMapEnsemblV5,498 transMapEstV5,467 transMapRefSeqV5,467 transMapRnaV5,467 transMapV5,573 be augustusGene,99 chainGalGal3,110 chainGalGal3,436 chainGalVar1,116 chainGalVar1,447 chainHg19,108 chainHg19,433 chainMm10,108 chainMm10,433 chainMm39,108 chainMm39,433 chainMonDom4,108 chainMonDom4,433 chainNetGalGal3,113 chainNetGalGal3,439 chainNetGalVar1,119 chainNetGalVar1,450 chainNetHg19,111 chainNetHg19,436 chainNetMm10,110 chainNetMm10,435 chainNetMm39,111 chainNetMm39,436 chainNetMonDom4,111 chainNetMonDom4,436 chainNetOryCun2,111 chainNetOryCun2,436 chainNetRn6,113 chainNetRn6,439 chainOryCun2,108 chainOryCun2,433 chainRn6,110 chainRn6,436 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 ensGene,61 ensGene,104 ensGene,138 est,109 est,122 est,144 est,253 est,263 est,274 est,305 est,323 est,333 est,382 est,433 est,529 est,637 gap,29 gc5Base,41 intronEst,58 intronEst,81 intronEst,190 intronEst,203 intronEst,225 intronEst,334 intronEst,344 intronEst,355 intronEst,386 intronEst,404 intronEst,414 intronEst,463 intronEst,514 intronEst,610 intronEst,718 microsat,19 microsat,39 mrna,68 mrna,90 mrna,199 mrna,209 mrna,220 mrna,251 mrna,269 mrna,279 mrna,328 mrna,372 nestedRepeats,269 nestedRepeats,291 netGalGal3,110 netGalGal3,436 netGalVar1,116 netGalVar1,447 netHg19,108 netHg19,433 netMm10,108 netMm10,433 netMm39,108 netMm39,433 netMonDom4,108 netMonDom4,433 netOryCun2,108 netOryCun2,433 netRn6,110 netRn6,436 quality,57 refGene,127 refSeqComposite,304 refSeqComposite,729 refSeqComposite,939 refSeqComposite,970 refSeqComposite,1030 refSeqComposite,1107 refSeqComposite,1195 refSeqComposite,1299 refSeqComposite,1306 refSeqComposite,1322 refSeqComposite,1394 refSeqComposite,1454 refSeqComposite,1485 refSeqComposite,1505 refSeqComposite,1513 refSeqComposite,1587 refSeqComposite,1609 refSeqComposite,1679 refSeqComposite,1704 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 tRNAs,128 tRNAs,220 tRNAs,227 transMapEnsemblV5,63 transMapEnsemblV5,110 transMapEnsemblV5,145 transMapEnsemblV5,527 transMapEnsemblV5,556 transMapEnsemblV5,611 transMapEnsemblV5,619 transMapEnsemblV5,642 transMapEnsemblV5,649 transMapEstV5,79 transMapEstV5,114 transMapEstV5,496 transMapEstV5,525 transMapEstV5,580 transMapEstV5,588 transMapEstV5,611 transMapEstV5,618 transMapRefSeqV5,79 transMapRefSeqV5,114 transMapRefSeqV5,496 transMapRefSeqV5,525 transMapRefSeqV5,580 transMapRefSeqV5,588 transMapRefSeqV5,611 transMapRefSeqV5,618 transMapRnaV5,79 transMapRnaV5,114 transMapRnaV5,496 transMapRnaV5,525 transMapRnaV5,580 transMapRnaV5,588 transMapRnaV5,611 transMapRnaV5,618 transMapV5,185 transMapV5,220 transMapV5,602 transMapV5,631 transMapV5,686 transMapV5,694 transMapV5,717 transMapV5,724 uniprot,181 uniprot,246 uniprot,1094 uniprot,1105 uniprot,1143 uniprot,1197 uniprot,1270 uniprot,1327 uniprot,1556 uniprot,1694 uniprot,1715 uniprot,1740 uniprot,1750 uniprot,1759 uniprot,1770 uniprot,1793 uniprot,1800 uniprot,1882 xenoMrna,142 xenoMrna,164 xenoMrna,273 xenoMrna,283 xenoMrna,294 xenoMrna,325 xenoMrna,343 xenoMrna,353 xenoMrna,402 xenoMrna,446 xenoRefGene,88 bears est,94 intronEst,175 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 est,629 intronEst,710 uniprot,674 xenoMrna,104 bed3 windowmaskerSdust,76 been chainGalGal3,577 chainGalVar1,588 chainHg19,574 chainMm10,574 chainMm39,574 chainMonDom4,574 chainNetGalGal3,580 chainNetGalVar1,591 chainNetHg19,577 chainNetMm10,576 chainNetMm39,577 chainNetMonDom4,577 chainNetOryCun2,577 chainNetRn6,580 chainOryCun2,574 chainRn6,577 intronEst,8 nestedRepeats,89 netGalGal3,577 netGalVar1,588 netHg19,574 netMm10,574 netMm39,574 netMonDom4,574 netOryCun2,574 netRn6,577 refSeqComposite,639 refSeqComposite,677 refSeqComposite,687 refSeqComposite,702 rmsk,70 rmsk,109 uniprot,34 uniprot,47 uniprot,303 uniprot,1043 before chainGalGal3,911 chainGalVar1,926 chainHg19,908 chainMm10,908 chainMm39,908 chainMonDom4,908 chainNetGalGal3,914 chainNetGalVar1,929 chainNetHg19,911 chainNetMm10,910 chainNetMm39,911 chainNetMonDom4,911 chainNetOryCun2,911 chainNetRn6,914 chainOryCun2,908 chainRn6,911 est,566 intronEst,647 netGalGal3,911 netGalVar1,926 netHg19,908 netMm10,908 netMm39,908 netMonDom4,908 netOryCun2,908 netRn6,911 uniprot,934 begin refSeqComposite,223 refSeqComposite,352 beginning refSeqComposite,1052 refSeqComposite,1650 beloow refSeqComposite,338 below chainGalGal3,685 chainGalVar1,700 chainHg19,682 chainMm10,682 chainMm39,682 chainMonDom4,682 chainNetGalGal3,688 chainNetGalVar1,703 chainNetHg19,685 chainNetMm10,684 chainNetMm39,685 chainNetMonDom4,685 chainNetOryCun2,685 chainNetRn6,688 chainOryCun2,682 chainRn6,685 ensGene,54 genscan,154 genscan,168 nestedRepeats,68 netGalGal3,685 netGalVar1,700 netHg19,682 netMm10,682 netMm39,682 netMonDom4,682 netOryCun2,682 netRn6,685 refSeqComposite,1396 refSeqComposite,1533 rmsk,104 tRNAs,179 uniprot,73 uniprot,92 uniprot,189 uniprot,207 uniprot,769 uniprot,898 benson est,747 est,775 intronEst,831 intronEst,859 microsat,102 microsat,112 microsat,114 mrna,464 mrna,492 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 xenoMrna,538 xenoMrna,566 best blastHg18KG,102 chainGalGal3,271 chainGalGal3,519 chainGalVar1,279 chainGalVar1,530 chainHg19,269 chainHg19,516 chainMm10,269 chainMm10,516 chainMm39,269 chainMm39,516 chainMonDom4,269 chainMonDom4,516 chainNetGalGal3,274 chainNetGalGal3,522 chainNetGalVar1,282 chainNetGalVar1,533 chainNetHg19,272 chainNetHg19,519 chainNetMm10,271 chainNetMm10,518 chainNetMm39,272 chainNetMm39,519 chainNetMonDom4,272 chainNetMonDom4,519 chainNetOryCun2,272 chainNetOryCun2,519 chainNetRn6,274 chainNetRn6,522 chainOryCun2,269 chainOryCun2,516 chainRn6,271 chainRn6,519 est,712 intronEst,793 mrna,428 netGalGal3,271 netGalGal3,519 netGalVar1,279 netGalVar1,530 netHg19,269 netHg19,516 netMm10,269 netMm10,516 netMm39,269 netMm39,516 netMonDom4,269 netMonDom4,516 netOryCun2,269 netOryCun2,516 netRn6,271 netRn6,519 refGene,306 refSeqComposite,1277 transMapEnsemblV5,242 transMapEstV5,211 transMapRefSeqV5,211 transMapRnaV5,211 transMapV5,67 transMapV5,317 uniprot,1074 uniprot,1415 xenoMrna,502 xenoRefGene,267 beta uniprot,364 better est,74 mrna,55 tRNAs,254 xenoMrna,59 between HLTOGAannotvHg38v1,66 chainGalGal3,52 chainGalGal3,627 chainGalGal3,858 chainGalVar1,55 chainGalVar1,640 chainGalVar1,873 chainHg19,51 chainHg19,624 chainHg19,855 chainMm10,51 chainMm10,624 chainMm10,855 chainMm39,51 chainMm39,624 chainMm39,855 chainMonDom4,51 chainMonDom4,624 chainMonDom4,855 chainNetGalGal3,55 chainNetGalGal3,630 chainNetGalGal3,861 chainNetGalVar1,58 chainNetGalVar1,643 chainNetGalVar1,876 chainNetHg19,54 chainNetHg19,627 chainNetHg19,858 chainNetMm10,53 chainNetMm10,626 chainNetMm10,857 chainNetMm39,54 chainNetMm39,627 chainNetMm39,858 chainNetMonDom4,54 chainNetMonDom4,627 chainNetMonDom4,858 chainNetOryCun2,54 chainNetOryCun2,627 chainNetOryCun2,858 chainNetRn6,55 chainNetRn6,630 chainNetRn6,861 chainOryCun2,51 chainOryCun2,624 chainOryCun2,855 chainRn6,52 chainRn6,627 chainRn6,858 est,17 est,85 gap,94 gold,46 gold,88 gold,93 intronEst,18 intronEst,76 intronEst,166 mrna,18 ncbiRefSeqGenomicDiff,4 netGalGal3,52 netGalGal3,627 netGalGal3,858 netGalVar1,55 netGalVar1,640 netGalVar1,873 netHg19,51 netHg19,624 netHg19,855 netMm10,51 netMm10,624 netMm10,855 netMm39,51 netMm39,624 netMm39,855 netMonDom4,51 netMonDom4,624 netMonDom4,855 netOryCun2,51 netOryCun2,624 netOryCun2,855 netRn6,52 netRn6,627 netRn6,858 nscanGene,90 refSeqComposite,65 refSeqComposite,462 refSeqComposite,878 tRNAs,199 uniprot,375 uniprot,922 uniprot,1371 uniprot,1615 bias uniprot,400 bigbed refSeqComposite,1380 refSeqComposite,1391 refSeqComposite,1481 uniprot,1736 bigbedtobed refSeqComposite,1510 refSeqComposite,1550 transMapEnsemblV5,616 transMapEnsemblV5,661 transMapEstV5,585 transMapEstV5,630 transMapRefSeqV5,585 transMapRefSeqV5,630 transMapRnaV5,585 transMapRnaV5,630 transMapV5,691 transMapV5,736 uniprot,1767 uniprot,1812 bigpsl transMapEnsemblV5,546 transMapEstV5,515 transMapRefSeqV5,515 transMapRnaV5,515 transMapV5,621 bin refSeqComposite,1436 refSeqComposite,1466 binaries transMapEnsemblV5,640 transMapEstV5,609 transMapRefSeqV5,609 transMapRnaV5,609 transMapV5,715 uniprot,1791 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 refSeqComposite,1524 transMapEnsemblV5,630 transMapEstV5,599 transMapRefSeqV5,599 transMapRnaV5,599 transMapV5,705 uniprot,1781 biochemical tRNAs,271 biocomput chainGalGal3,1046 chainGalVar1,1061 chainHg19,1043 chainMm10,1043 chainMm39,1043 chainMonDom4,1043 chainNetGalGal3,1049 chainNetGalVar1,1064 chainNetHg19,1046 chainNetMm10,1045 chainNetMm39,1046 chainNetMonDom4,1046 chainNetOryCun2,1046 chainNetRn6,1049 chainOryCun2,1043 chainRn6,1046 netGalGal3,1046 netGalVar1,1061 netHg19,1043 netMm10,1043 netMm39,1043 netMonDom4,1043 netOryCun2,1043 netRn6,1046 bioinformatics augustusGene,307 augustusGene,332 nscanGene,352 transMapEnsemblV5,778 transMapEstV5,747 transMapRefSeqV5,747 transMapRnaV5,747 transMapV5,853 windowmaskerSdust,106 biol blastHg18KG,172 cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,222 nscanGene,283 tRNAs,431 transMapEnsemblV5,813 transMapEstV5,782 transMapRefSeqV5,782 transMapRnaV5,782 transMapV5,888 biological uniprot,320 biological-signal nscanGene,41 biology genscan,200 birds HLTOGAannotvHg38v1,60 augustusGene,203 birney ensGene,172 bits tRNAs,124 tRNAs,167 tRNAs,201 bj nscanGene,292 black gap,39 gap,78 blast blastHg18KG,146 blastHg18KG,153 uniprot,949 uniprot,1084 uniprot,1115 blast-like est,805 intronEst,889 mrna,522 refGene,346 refSeqComposite,1736 xenoMrna,596 xenoRefGene,306 blastz chainGalGal3,923 chainGalGal3,1110 chainGalVar1,938 chainGalVar1,1125 chainHg19,920 chainHg19,1107 chainMm10,920 chainMm10,1107 chainMm39,920 chainMm39,1107 chainMonDom4,920 chainMonDom4,1107 chainNetGalGal3,926 chainNetGalGal3,1113 chainNetGalVar1,941 chainNetGalVar1,1128 chainNetHg19,923 chainNetHg19,1110 chainNetMm10,922 chainNetMm10,1109 chainNetMm39,923 chainNetMm39,1110 chainNetMonDom4,923 chainNetMonDom4,1110 chainNetOryCun2,923 chainNetOryCun2,1110 chainNetRn6,926 chainNetRn6,1113 chainOryCun2,920 chainOryCun2,1107 chainRn6,923 chainRn6,1110 netGalGal3,923 netGalGal3,1110 netGalVar1,938 netGalVar1,1125 netHg19,920 netHg19,1107 netMm10,920 netMm10,1107 netMm39,920 netMm39,1107 netMonDom4,920 netMonDom4,1107 netOryCun2,920 netOryCun2,1107 netRn6,923 netRn6,1110 transMapEnsemblV5,78 transMapEnsemblV5,196 transMapEstV5,47 transMapEstV5,165 transMapRefSeqV5,47 transMapRefSeqV5,165 transMapRnaV5,47 transMapRnaV5,165 transMapV5,48 transMapV5,144 transMapV5,271 blat blastHg18KG,54 blastHg18KG,179 est,657 est,666 est,803 intronEst,738 intronEst,747 intronEst,887 mrna,398 mrna,520 refGene,267 refGene,344 refSeqComposite,1238 refSeqComposite,1734 transMapEnsemblV5,167 transMapEstV5,136 transMapRefSeqV5,136 transMapRnaV5,136 transMapV5,126 transMapV5,150 transMapV5,157 transMapV5,242 xenoMrna,16 xenoMrna,472 xenoMrna,594 xenoRefGene,228 blat--the xenoRefGene,305 blocks chainGalGal3,45 chainGalGal3,650 chainGalGal3,671 chainGalVar1,48 chainGalVar1,665 chainGalVar1,686 chainHg19,44 chainHg19,647 chainHg19,668 chainMm10,44 chainMm10,647 chainMm10,668 chainMm39,44 chainMm39,647 chainMm39,668 chainMonDom4,44 chainMonDom4,647 chainMonDom4,668 chainNetGalGal3,48 chainNetGalGal3,653 chainNetGalGal3,674 chainNetGalVar1,51 chainNetGalVar1,668 chainNetGalVar1,689 chainNetHg19,47 chainNetHg19,650 chainNetHg19,671 chainNetMm10,46 chainNetMm10,649 chainNetMm10,670 chainNetMm39,47 chainNetMm39,650 chainNetMm39,671 chainNetMonDom4,47 chainNetMonDom4,650 chainNetMonDom4,671 chainNetOryCun2,47 chainNetOryCun2,650 chainNetOryCun2,671 chainNetRn6,48 chainNetRn6,653 chainNetRn6,674 chainOryCun2,44 chainOryCun2,647 chainOryCun2,668 chainRn6,45 chainRn6,650 chainRn6,671 gold,98 gold,125 intronEst,79 netGalGal3,45 netGalGal3,650 netGalGal3,671 netGalVar1,48 netGalVar1,665 netGalVar1,686 netHg19,44 netHg19,647 netHg19,668 netMm10,44 netMm10,647 netMm10,668 netMm39,44 netMm39,647 netMm39,668 netMonDom4,44 netMonDom4,647 netMonDom4,668 netOryCun2,44 netOryCun2,647 netOryCun2,668 netRn6,45 netRn6,650 netRn6,671 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 ensGene,131 blue unipAliSwissprot,11 unipAliSwissprot,15 uniprot,507 uniprot,583 blumer HLTOGAannotvHg38v1,344 bm HLTOGAannotvHg38v1,335 bolchi tRNAs,474 bond uniprot,473 bonds unipDisulfBond,2 unipDisulfBond,5 uniprot,334 uniprot,336 both chainGalGal3,98 chainGalGal3,119 chainGalGal3,173 chainGalGal3,901 chainGalVar1,102 chainGalVar1,125 chainGalVar1,181 chainGalVar1,916 chainHg19,96 chainHg19,117 chainHg19,171 chainHg19,898 chainMm10,96 chainMm10,117 chainMm10,171 chainMm10,898 chainMm39,96 chainMm39,117 chainMm39,171 chainMm39,898 chainMonDom4,96 chainMonDom4,117 chainMonDom4,171 chainMonDom4,898 chainNetGalGal3,101 chainNetGalGal3,122 chainNetGalGal3,176 chainNetGalGal3,904 chainNetGalVar1,105 chainNetGalVar1,128 chainNetGalVar1,184 chainNetGalVar1,919 chainNetHg19,99 chainNetHg19,120 chainNetHg19,174 chainNetHg19,901 chainNetMm10,98 chainNetMm10,119 chainNetMm10,173 chainNetMm10,900 chainNetMm39,99 chainNetMm39,120 chainNetMm39,174 chainNetMm39,901 chainNetMonDom4,99 chainNetMonDom4,120 chainNetMonDom4,174 chainNetMonDom4,901 chainNetOryCun2,99 chainNetOryCun2,120 chainNetOryCun2,174 chainNetOryCun2,901 chainNetRn6,101 chainNetRn6,122 chainNetRn6,176 chainNetRn6,904 chainOryCun2,96 chainOryCun2,117 chainOryCun2,171 chainOryCun2,898 chainRn6,98 chainRn6,119 chainRn6,173 chainRn6,901 netGalGal3,98 netGalGal3,119 netGalGal3,173 netGalGal3,901 netGalVar1,102 netGalVar1,125 netGalVar1,181 netGalVar1,916 netHg19,96 netHg19,117 netHg19,171 netHg19,898 netMm10,96 netMm10,117 netMm10,171 netMm10,898 netMm39,96 netMm39,117 netMm39,171 netMm39,898 netMonDom4,96 netMonDom4,117 netMonDom4,171 netMonDom4,898 netOryCun2,96 netOryCun2,117 netOryCun2,171 netOryCun2,898 netRn6,98 netRn6,119 netRn6,173 netRn6,901 refGene,165 refGene,236 tRNAs,329 transMapEnsemblV5,512 transMapEstV5,481 transMapRefSeqV5,481 transMapRnaV5,481 transMapV5,587 uniprot,675 uniprot,1616 xenoRefGene,126 xenoRefGene,197 bothgap chainGalGal3,752 chainGalVar1,767 chainHg19,749 chainMm10,749 chainMm39,749 chainMonDom4,749 chainNetGalGal3,755 chainNetGalVar1,770 chainNetHg19,752 chainNetMm10,751 chainNetMm39,752 chainNetMonDom4,752 chainNetOryCun2,752 chainNetRn6,755 chainOryCun2,749 chainRn6,752 netGalGal3,752 netGalVar1,767 netHg19,749 netMm10,749 netMm39,749 netMonDom4,749 netOryCun2,749 netRn6,752 boundaries HLTOGAannotvHg38v1,111 blastHg18KG,59 gold,73 box chainGalGal3,379 chainGalGal3,461 chainGalVar1,390 chainGalVar1,472 chainHg19,376 chainHg19,458 chainMm10,376 chainMm10,458 chainMm39,376 chainMm39,458 chainMonDom4,376 chainMonDom4,458 chainNetGalGal3,382 chainNetGalGal3,464 chainNetGalVar1,393 chainNetGalVar1,475 chainNetHg19,379 chainNetHg19,461 chainNetMm10,378 chainNetMm10,460 chainNetMm39,379 chainNetMm39,461 chainNetMonDom4,379 chainNetMonDom4,461 chainNetOryCun2,379 chainNetOryCun2,461 chainNetRn6,382 chainNetRn6,464 chainOryCun2,376 chainOryCun2,458 chainRn6,379 chainRn6,461 est,208 est,219 est,259 gap,79 intronEst,289 intronEst,300 intronEst,340 mrna,154 mrna,165 mrna,205 netGalGal3,379 netGalGal3,461 netGalVar1,390 netGalVar1,472 netHg19,376 netHg19,458 netMm10,376 netMm10,458 netMm39,376 netMm39,458 netMonDom4,376 netMonDom4,458 netOryCun2,376 netOryCun2,458 netRn6,379 netRn6,461 refGene,255 tRNAs,37 xenoMrna,228 xenoMrna,239 xenoMrna,279 xenoRefGene,216 boxes chainGalGal3,125 chainGalGal3,135 chainGalGal3,450 chainGalVar1,131 chainGalVar1,141 chainGalVar1,461 chainHg19,123 chainHg19,133 chainHg19,447 chainMm10,123 chainMm10,133 chainMm10,447 chainMm39,123 chainMm39,133 chainMm39,447 chainMonDom4,123 chainMonDom4,133 chainMonDom4,447 chainNetGalGal3,128 chainNetGalGal3,138 chainNetGalGal3,453 chainNetGalVar1,134 chainNetGalVar1,144 chainNetGalVar1,464 chainNetHg19,126 chainNetHg19,136 chainNetHg19,450 chainNetMm10,125 chainNetMm10,135 chainNetMm10,449 chainNetMm39,126 chainNetMm39,136 chainNetMm39,450 chainNetMonDom4,126 chainNetMonDom4,136 chainNetMonDom4,450 chainNetOryCun2,126 chainNetOryCun2,136 chainNetOryCun2,450 chainNetRn6,128 chainNetRn6,138 chainNetRn6,453 chainOryCun2,123 chainOryCun2,133 chainOryCun2,447 chainRn6,125 chainRn6,135 chainRn6,450 est,179 gap,40 intronEst,260 mrna,125 nestedRepeats,126 netGalGal3,125 netGalGal3,135 netGalGal3,450 netGalVar1,131 netGalVar1,141 netGalVar1,461 netHg19,123 netHg19,133 netHg19,447 netMm10,123 netMm10,133 netMm10,447 netMm39,123 netMm39,133 netMm39,447 netMonDom4,123 netMonDom4,133 netMonDom4,447 netOryCun2,123 netOryCun2,133 netOryCun2,447 netRn6,125 netRn6,135 netRn6,450 refSeqComposite,166 xenoMrna,199 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 refSeqComposite,946 branch transMapEnsemblV5,220 transMapEstV5,189 transMapRefSeqV5,189 transMapRnaV5,189 transMapV5,295 branch-point augustusGene,55 brejov transMapEnsemblV5,718 transMapEstV5,687 transMapRefSeqV5,687 transMapRnaV5,687 transMapV5,793 brent nscanGene,229 nscanGene,255 nscanGene,272 nscanGene,343 nscanGene,363 brian blastHg18KG,199 uniprot,1959 bridge gold,123 bridged gap,68 briefly uniprot,778 broad chainMonDom4,6 chainMonDom4,68 chainMonDom4,308 chainNetMonDom4,7 chainNetMonDom4,71 chainNetMonDom4,311 chainNetMonDom4Viewchain,5 chainNetMonDom4Viewnet,5 chainNetOryCun2,7 chainNetOryCun2,71 chainNetOryCun2,311 chainNetOryCun2Viewchain,5 chainNetOryCun2Viewnet,5 chainOryCun2,6 chainOryCun2,68 chainOryCun2,308 netMonDom4,6 netMonDom4,68 netMonDom4,308 netOryCun2,6 netOryCun2,68 netOryCun2,308 brown gold,83 gold,97 refGene,362 refSeqComposite,1752 xenoRefGene,322 browser chainGalGal3,981 chainGalVar1,996 chainHg19,978 chainMm10,978 chainMm39,978 chainMonDom4,978 chainNetGalGal3,984 chainNetGalVar1,999 chainNetHg19,981 chainNetMm10,980 chainNetMm39,981 chainNetMonDom4,981 chainNetOryCun2,981 chainNetRn6,984 chainOryCun2,978 chainRn6,981 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 ensGene,67 est,226 est,350 est,367 intronEst,307 intronEst,431 intronEst,448 mrna,172 mrna,296 mrna,313 nestedRepeats,243 netGalGal3,981 netGalVar1,996 netHg19,978 netMm10,978 netMm39,978 netMonDom4,978 netOryCun2,978 netRn6,981 refSeqComposite,1125 refSeqComposite,1187 refSeqComposite,1314 refSeqComposite,1451 transMapEnsemblV5,37 transMapEnsemblV5,165 transMapEnsemblV5,533 transMapEstV5,35 transMapEstV5,134 transMapEstV5,502 transMapRefSeqV5,35 transMapRefSeqV5,134 transMapRefSeqV5,502 transMapRnaV5,35 transMapRnaV5,134 transMapRnaV5,502 transMapV5,34 transMapV5,240 transMapV5,608 ucscToRefSeq,14 uniprot,1544 uniprot,1721 xenoMrna,246 xenoMrna,370 xenoMrna,387 browsing uniprot,1662 bruccoleri tRNAs,353 build refSeqComposite,300 uniprot,1552 builds transMapEnsemblV5,54 built augustusGene,51 augustusGene,67 burge genscan,22 genscan,146 genscan,166 genscan,173 genscan,180 genscan,207 burks tRNAs,419 but HLTOGAannotvHg38v1,194 HLTOGAannotvHg38v1,249 blastHg18KG,96 chainGalGal3,552 chainGalVar1,563 chainHg19,549 chainMm10,549 chainMm39,549 chainMonDom4,549 chainNetGalGal3,555 chainNetGalVar1,566 chainNetHg19,552 chainNetMm10,551 chainNetMm39,552 chainNetMonDom4,552 chainNetOryCun2,552 chainNetRn6,555 chainOryCun2,549 chainRn6,552 est,486 est,543 est,596 intronEst,567 intronEst,624 intronEst,677 netGalGal3,552 netGalVar1,563 netHg19,549 netMm10,549 netMm39,549 netMonDom4,549 netOryCun2,549 netRn6,552 refSeqComposite,427 refSeqComposite,899 refSeqComposite,1032 refSeqComposite,1452 rmsk,311 uniprot,638 uniprot,1047 button chainGalGal3,350 chainGalVar1,361 chainHg19,347 chainMm10,347 chainMm39,347 chainMonDom4,347 chainNetGalGal3,353 chainNetGalVar1,364 chainNetHg19,350 chainNetMm10,349 chainNetMm39,350 chainNetMonDom4,350 chainNetOryCun2,350 chainNetRn6,353 chainOryCun2,347 chainRn6,350 netGalGal3,350 netGalVar1,361 netHg19,347 netMm10,347 netMm39,347 netMonDom4,347 netOryCun2,347 netRn6,350 by HLTOGAannotvHg38v1,319 augustusGene,147 augustusGene,266 augustusGene,282 blastHg18KG,6 blastHg18KG,182 blastHg18KG,195 chainGalGal3,112 chainGalGal3,128 chainGalGal3,320 chainGalGal3,383 chainGalGal3,420 chainGalGal3,438 chainGalGal3,818 chainGalGal3,930 chainGalGal3,949 chainGalGal3,969 chainGalGal3,993 chainGalGal3,1014 chainGalVar1,118 chainGalVar1,134 chainGalVar1,331 chainGalVar1,394 chainGalVar1,431 chainGalVar1,449 chainGalVar1,833 chainGalVar1,945 chainGalVar1,964 chainGalVar1,984 chainGalVar1,1008 chainGalVar1,1029 chainHg19,110 chainHg19,126 chainHg19,317 chainHg19,380 chainHg19,417 chainHg19,435 chainHg19,815 chainHg19,927 chainHg19,946 chainHg19,966 chainHg19,990 chainHg19,1011 chainMm10,110 chainMm10,126 chainMm10,317 chainMm10,380 chainMm10,417 chainMm10,435 chainMm10,815 chainMm10,927 chainMm10,946 chainMm10,966 chainMm10,990 chainMm10,1011 chainMm39,110 chainMm39,126 chainMm39,317 chainMm39,380 chainMm39,417 chainMm39,435 chainMm39,815 chainMm39,927 chainMm39,946 chainMm39,966 chainMm39,990 chainMm39,1011 chainMonDom4,110 chainMonDom4,126 chainMonDom4,317 chainMonDom4,380 chainMonDom4,417 chainMonDom4,435 chainMonDom4,815 chainMonDom4,927 chainMonDom4,946 chainMonDom4,966 chainMonDom4,990 chainMonDom4,1011 chainNetGalGal3,115 chainNetGalGal3,131 chainNetGalGal3,323 chainNetGalGal3,386 chainNetGalGal3,423 chainNetGalGal3,441 chainNetGalGal3,821 chainNetGalGal3,933 chainNetGalGal3,952 chainNetGalGal3,972 chainNetGalGal3,996 chainNetGalGal3,1017 chainNetGalVar1,121 chainNetGalVar1,137 chainNetGalVar1,334 chainNetGalVar1,397 chainNetGalVar1,434 chainNetGalVar1,452 chainNetGalVar1,836 chainNetGalVar1,948 chainNetGalVar1,967 chainNetGalVar1,987 chainNetGalVar1,1011 chainNetGalVar1,1032 chainNetHg19,113 chainNetHg19,129 chainNetHg19,320 chainNetHg19,383 chainNetHg19,420 chainNetHg19,438 chainNetHg19,818 chainNetHg19,930 chainNetHg19,949 chainNetHg19,969 chainNetHg19,993 chainNetHg19,1014 chainNetMm10,112 chainNetMm10,128 chainNetMm10,319 chainNetMm10,382 chainNetMm10,419 chainNetMm10,437 chainNetMm10,817 chainNetMm10,929 chainNetMm10,948 chainNetMm10,968 chainNetMm10,992 chainNetMm10,1013 chainNetMm39,113 chainNetMm39,129 chainNetMm39,320 chainNetMm39,383 chainNetMm39,420 chainNetMm39,438 chainNetMm39,818 chainNetMm39,930 chainNetMm39,949 chainNetMm39,969 chainNetMm39,993 chainNetMm39,1014 chainNetMonDom4,113 chainNetMonDom4,129 chainNetMonDom4,320 chainNetMonDom4,383 chainNetMonDom4,420 chainNetMonDom4,438 chainNetMonDom4,818 chainNetMonDom4,930 chainNetMonDom4,949 chainNetMonDom4,969 chainNetMonDom4,993 chainNetMonDom4,1014 chainNetOryCun2,113 chainNetOryCun2,129 chainNetOryCun2,320 chainNetOryCun2,383 chainNetOryCun2,420 chainNetOryCun2,438 chainNetOryCun2,818 chainNetOryCun2,930 chainNetOryCun2,949 chainNetOryCun2,969 chainNetOryCun2,993 chainNetOryCun2,1014 chainNetRn6,115 chainNetRn6,131 chainNetRn6,323 chainNetRn6,386 chainNetRn6,423 chainNetRn6,441 chainNetRn6,821 chainNetRn6,933 chainNetRn6,952 chainNetRn6,972 chainNetRn6,996 chainNetRn6,1017 chainOryCun2,110 chainOryCun2,126 chainOryCun2,317 chainOryCun2,380 chainOryCun2,417 chainOryCun2,435 chainOryCun2,815 chainOryCun2,927 chainOryCun2,946 chainOryCun2,966 chainOryCun2,990 chainOryCun2,1011 chainRn6,112 chainRn6,128 chainRn6,320 chainRn6,383 chainRn6,420 chainRn6,438 chainRn6,818 chainRn6,930 chainRn6,949 chainRn6,969 chainRn6,993 chainRn6,1014 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 ensGene,15 est,268 est,496 est,665 est,743 gap,61 gap,106 gc5Base,81 genscan,20 genscan,88 genscan,121 gold,76 intronEst,93 intronEst,349 intronEst,577 intronEst,746 intronEst,827 microsat,110 mrna,214 mrna,460 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netGalGal3,112 netGalGal3,128 netGalGal3,320 netGalGal3,383 netGalGal3,420 netGalGal3,438 netGalGal3,818 netGalGal3,930 netGalGal3,949 netGalGal3,969 netGalGal3,993 netGalGal3,1014 netGalVar1,118 netGalVar1,134 netGalVar1,331 netGalVar1,394 netGalVar1,431 netGalVar1,449 netGalVar1,833 netGalVar1,945 netGalVar1,964 netGalVar1,984 netGalVar1,1008 netGalVar1,1029 netHg19,110 netHg19,126 netHg19,317 netHg19,380 netHg19,417 netHg19,435 netHg19,815 netHg19,927 netHg19,946 netHg19,966 netHg19,990 netHg19,1011 netMm10,110 netMm10,126 netMm10,317 netMm10,380 netMm10,417 netMm10,435 netMm10,815 netMm10,927 netMm10,946 netMm10,966 netMm10,990 netMm10,1011 netMm39,110 netMm39,126 netMm39,317 netMm39,380 netMm39,417 netMm39,435 netMm39,815 netMm39,927 netMm39,946 netMm39,966 netMm39,990 netMm39,1011 netMonDom4,110 netMonDom4,126 netMonDom4,317 netMonDom4,380 netMonDom4,417 netMonDom4,435 netMonDom4,815 netMonDom4,927 netMonDom4,946 netMonDom4,966 netMonDom4,990 netMonDom4,1011 netOryCun2,110 netOryCun2,126 netOryCun2,317 netOryCun2,380 netOryCun2,417 netOryCun2,435 netOryCun2,815 netOryCun2,927 netOryCun2,946 netOryCun2,966 netOryCun2,990 netOryCun2,1011 netRn6,112 netRn6,128 netRn6,320 netRn6,383 netRn6,420 netRn6,438 netRn6,818 netRn6,930 netRn6,949 netRn6,969 netRn6,993 netRn6,1014 nscanGene,23 quality,107 refGene,141 refGene,146 refGene,210 refGene,228 refGene,234 refGene,331 refGene,336 refSeqComposite,39 refSeqComposite,50 refSeqComposite,70 refSeqComposite,207 refSeqComposite,372 refSeqComposite,385 refSeqComposite,446 refSeqComposite,559 refSeqComposite,628 refSeqComposite,641 refSeqComposite,645 refSeqComposite,689 refSeqComposite,765 refSeqComposite,770 refSeqComposite,847 refSeqComposite,865 refSeqComposite,1204 refSeqComposite,1721 refSeqComposite,1726 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 tRNAs,20 tRNAs,335 tRNAs,347 tRNAs,490 transMapEnsemblV5,23 transMapEnsemblV5,229 transMapEnsemblV5,398 transMapEnsemblV5,681 transMapEnsemblV5,699 transMapEnsemblV5,705 transMapEnsemblV5,743 transMapEstV5,21 transMapEstV5,198 transMapEstV5,367 transMapEstV5,650 transMapEstV5,668 transMapEstV5,674 transMapEstV5,712 transMapRefSeqV5,21 transMapRefSeqV5,198 transMapRefSeqV5,367 transMapRefSeqV5,650 transMapRefSeqV5,668 transMapRefSeqV5,674 transMapRefSeqV5,712 transMapRnaV5,21 transMapRnaV5,198 transMapRnaV5,367 transMapRnaV5,650 transMapRnaV5,668 transMapRnaV5,674 transMapRnaV5,712 transMapV5,20 transMapV5,304 transMapV5,473 transMapV5,756 transMapV5,774 transMapV5,780 transMapV5,818 ucscToRefSeq,44 uniprot,39 uniprot,49 uniprot,224 uniprot,713 uniprot,720 uniprot,818 uniprot,987 uniprot,995 uniprot,1015 uniprot,1028 uniprot,1045 uniprot,1538 uniprot,1764 uniprot,1943 windowmaskerSdust,6 windowmaskerSdust,20 xenoMrna,288 xenoMrna,534 xenoRefGene,102 xenoRefGene,107 xenoRefGene,171 xenoRefGene,189 xenoRefGene,195 xenoRefGene,292 xenoRefGene,297 c HLTOGAannotvHg38v1,337 cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5Base,23 genscan,181 genscan,208 refSeqComposite,917 refSeqComposite,958 refSeqComposite,985 refSeqComposite,1044 refSeqComposite,1071 refSeqComposite,1083 tRNAs,349 tRNAs,420 transMapEnsemblV5,728 transMapEnsemblV5,734 transMapEstV5,697 transMapEstV5,703 transMapRefSeqV5,697 transMapRefSeqV5,703 transMapRnaV5,697 transMapRnaV5,703 transMapV5,803 transMapV5,809 windowmaskerSdust,30 c-114100-125-31 chainGalVar1,695 chainHg19,677 chainMm10,677 chainMm39,677 chainNetGalVar1,698 chainNetHg19,680 chainNetMm10,679 chainNetMm39,680 chainNetOryCun2,680 chainNetRn6,683 chainOryCun2,677 chainRn6,680 netGalVar1,695 netHg19,677 netMm10,677 netMm39,677 netOryCun2,677 netRn6,680 c-90100-100-25 chainGalGal3,680 chainMonDom4,677 chainNetGalGal3,683 chainNetMonDom4,680 netGalGal3,680 netMonDom4,677 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainGalGal3,965 chainGalGal3,1011 chainGalVar1,980 chainGalVar1,1026 chainHg19,962 chainHg19,1008 chainMm10,962 chainMm10,1008 chainMm39,962 chainMm39,1008 chainMonDom4,962 chainMonDom4,1008 chainNetGalGal3,968 chainNetGalGal3,1014 chainNetGalVar1,983 chainNetGalVar1,1029 chainNetHg19,965 chainNetHg19,1011 chainNetMm10,964 chainNetMm10,1010 chainNetMm39,965 chainNetMm39,1011 chainNetMonDom4,965 chainNetMonDom4,1011 chainNetOryCun2,965 chainNetOryCun2,1011 chainNetRn6,968 chainNetRn6,1014 chainOryCun2,962 chainOryCun2,1008 chainRn6,965 chainRn6,1011 netGalGal3,965 netGalGal3,1011 netGalVar1,980 netGalVar1,1026 netHg19,962 netHg19,1008 netMm10,962 netMm10,1008 netMm39,962 netMm39,1008 netMonDom4,962 netMonDom4,1008 netOryCun2,962 netOryCun2,1008 netRn6,965 netRn6,1011 cameron ensGene,174 can augustusGene,98 chainGalGal3,93 chainGalGal3,109 chainGalVar1,97 chainGalVar1,115 chainHg19,91 chainHg19,107 chainMm10,91 chainMm10,107 chainMm39,91 chainMm39,107 chainMonDom4,91 chainMonDom4,107 chainNetGalGal3,96 chainNetGalGal3,112 chainNetGalVar1,100 chainNetGalVar1,118 chainNetHg19,94 chainNetHg19,110 chainNetMm10,93 chainNetMm10,109 chainNetMm39,94 chainNetMm39,110 chainNetMonDom4,94 chainNetMonDom4,110 chainNetOryCun2,94 chainNetOryCun2,110 chainNetRn6,96 chainNetRn6,112 chainOryCun2,91 chainOryCun2,107 chainRn6,93 chainRn6,109 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 ensGene,60 ensGene,103 ensGene,137 est,121 est,252 intronEst,202 intronEst,333 mrna,67 mrna,198 netGalGal3,93 netGalGal3,109 netGalVar1,97 netGalVar1,115 netHg19,91 netHg19,107 netMm10,91 netMm10,107 netMm39,91 netMm39,107 netMonDom4,91 netMonDom4,107 netOryCun2,91 netOryCun2,107 netRn6,93 netRn6,109 refGene,126 refSeqComposite,287 refSeqComposite,728 refSeqComposite,1106 refSeqComposite,1194 refSeqComposite,1298 refSeqComposite,1305 refSeqComposite,1320 refSeqComposite,1353 refSeqComposite,1393 refSeqComposite,1453 refSeqComposite,1461 refSeqComposite,1484 refSeqComposite,1504 refSeqComposite,1512 refSeqComposite,1565 refSeqComposite,1585 refSeqComposite,1608 refSeqComposite,1678 refSeqComposite,1703 rmsk,116 simpleRepeat,35 transMapEnsemblV5,526 transMapEnsemblV5,555 transMapEnsemblV5,610 transMapEnsemblV5,618 transMapEnsemblV5,641 transMapEnsemblV5,647 transMapEstV5,495 transMapEstV5,524 transMapEstV5,579 transMapEstV5,587 transMapEstV5,610 transMapEstV5,616 transMapRefSeqV5,495 transMapRefSeqV5,524 transMapRefSeqV5,579 transMapRefSeqV5,587 transMapRefSeqV5,610 transMapRefSeqV5,616 transMapRnaV5,495 transMapRnaV5,524 transMapRnaV5,579 transMapRnaV5,587 transMapRnaV5,610 transMapRnaV5,616 transMapV5,601 transMapV5,630 transMapV5,685 transMapV5,693 transMapV5,716 transMapV5,722 uniprot,180 uniprot,656 uniprot,1064 uniprot,1093 uniprot,1104 uniprot,1326 uniprot,1555 uniprot,1693 uniprot,1714 uniprot,1739 uniprot,1749 uniprot,1758 uniprot,1769 uniprot,1792 uniprot,1798 uniprot,1881 xenoMrna,141 xenoMrna,272 xenoRefGene,87 candidates tRNAs,51 tRNAs,57 cannot uniprot,1269 canonical intronEst,70 cap-selected est,559 intronEst,640 cap-selection est,568 intronEst,649 carefully tRNAs,229 cases chainGalGal3,195 chainGalGal3,407 chainGalVar1,203 chainGalVar1,418 chainHg19,193 chainHg19,404 chainMm10,193 chainMm10,404 chainMm39,193 chainMm39,404 chainMonDom4,193 chainMonDom4,404 chainNetGalGal3,198 chainNetGalGal3,410 chainNetGalVar1,206 chainNetGalVar1,421 chainNetHg19,196 chainNetHg19,407 chainNetMm10,195 chainNetMm10,406 chainNetMm39,196 chainNetMm39,407 chainNetMonDom4,196 chainNetMonDom4,407 chainNetOryCun2,196 chainNetOryCun2,407 chainNetRn6,198 chainNetRn6,410 chainOryCun2,193 chainOryCun2,404 chainRn6,195 chainRn6,407 netGalGal3,195 netGalGal3,407 netGalVar1,203 netGalVar1,418 netHg19,193 netHg19,404 netMm10,193 netMm10,404 netMm39,193 netMm39,404 netMonDom4,193 netMonDom4,404 netOryCun2,193 netOryCun2,404 netRn6,195 netRn6,407 tRNAs,224 uniprot,757 uniprot,1183 uniprot,1452 cat uniprot,1936 categorized chainGalGal3,508 chainGalVar1,519 chainHg19,505 chainMm10,505 chainMm39,505 chainMonDom4,505 chainNetGalGal3,511 chainNetGalVar1,522 chainNetHg19,508 chainNetMm10,507 chainNetMm39,508 chainNetMonDom4,508 chainNetOryCun2,508 chainNetRn6,511 chainOryCun2,505 chainRn6,508 netGalGal3,508 netGalVar1,519 netHg19,505 netMm10,505 netMm39,505 netMonDom4,505 netOryCun2,505 netRn6,508 cauldron chainGalGal3,1063 chainGalVar1,1078 chainHg19,1060 chainMm10,1060 chainMm39,1060 chainMonDom4,1060 chainNetGalGal3,1066 chainNetGalVar1,1081 chainNetHg19,1063 chainNetMm10,1062 chainNetMm39,1063 chainNetMonDom4,1063 chainNetOryCun2,1063 chainNetRn6,1066 chainOryCun2,1060 chainRn6,1063 netGalGal3,1063 netGalVar1,1078 netHg19,1060 netMm10,1060 netMm39,1060 netMonDom4,1060 netOryCun2,1060 netRn6,1063 cause chainGalGal3,490 chainGalVar1,501 chainHg19,487 chainMm10,487 chainMm39,487 chainMonDom4,487 chainNetGalGal3,493 chainNetGalVar1,504 chainNetHg19,490 chainNetMm10,489 chainNetMm39,490 chainNetMonDom4,490 chainNetOryCun2,490 chainNetRn6,493 chainOryCun2,487 chainRn6,490 netGalGal3,490 netGalVar1,501 netHg19,487 netMm10,487 netMm39,487 netMonDom4,487 netOryCun2,487 netRn6,490 caused chainGalGal3,111 chainGalVar1,117 chainHg19,109 chainMm10,109 chainMm39,109 chainMonDom4,109 chainNetGalGal3,114 chainNetGalVar1,120 chainNetHg19,112 chainNetMm10,111 chainNetMm39,112 chainNetMonDom4,112 chainNetOryCun2,112 chainNetRn6,114 chainOryCun2,109 chainRn6,111 netGalGal3,111 netGalVar1,117 netHg19,109 netMm10,109 netMm39,109 netMonDom4,109 netOryCun2,109 netRn6,111 cavanaugh est,749 intronEst,833 mrna,466 xenoMrna,540 cavpor3 ensGene,80 refSeqComposite,1554 refSeqComposite,1618 transMapEnsemblV5,205 transMapEnsemblV5,665 transMapEstV5,174 transMapEstV5,634 transMapRefSeqV5,174 transMapRefSeqV5,634 transMapRnaV5,174 transMapRnaV5,634 transMapV5,280 transMapV5,740 uniprot,1816 cavpor3.ensembl.transmapv4.bigpsl transMapEnsemblV5,593 transMapEstV5,562 transMapRefSeqV5,562 transMapRnaV5,562 cavpor3.ensembl.transmapv5.bigpsl transMapV5,668 cavpor3.est.transmapv4.bigpsl transMapEnsemblV5,602 transMapEstV5,571 transMapRefSeqV5,571 transMapRnaV5,571 cavpor3.est.transmapv5.bigpsl transMapV5,677 cavpor3.fa windowmaskerSdust,62 windowmaskerSdust,71 cavpor3.refseq.transmapv4.bigpsl transMapEnsemblV5,596 transMapEnsemblV5,668 transMapEstV5,565 transMapEstV5,637 transMapRefSeqV5,565 transMapRefSeqV5,637 transMapRnaV5,565 transMapRnaV5,637 cavpor3.refseq.transmapv5.bigpsl transMapV5,671 transMapV5,743 cavpor3.rna.transmapv4.bigpsl transMapEnsemblV5,599 transMapEstV5,568 transMapRefSeqV5,568 transMapRnaV5,568 cavpor3.rna.transmapv5.bigpsl transMapV5,674 cb transMapEnsemblV5,794 transMapEstV5,763 transMapRefSeqV5,763 transMapRnaV5,763 transMapV5,869 cd nscanGene,311 cdna augustusGene,299 est,461 est,464 intronEst,542 intronEst,545 refSeqComposite,267 refSeqComposite,363 transMapEnsemblV5,391 transMapEnsemblV5,687 transMapEnsemblV5,770 transMapEstV5,360 transMapEstV5,656 transMapEstV5,739 transMapRefSeqV5,360 transMapRefSeqV5,656 transMapRefSeqV5,739 transMapRnaV5,360 transMapRnaV5,656 transMapRnaV5,739 transMapV5,15 transMapV5,466 transMapV5,762 transMapV5,845 cdnas nscanGene,202 transMapEnsemblV5,125 transMapEstV5,94 transMapRefSeqV5,94 transMapRnaV5,94 transMapV5,200 cds HLTOGAannotvHg38v1,148 HLTOGAannotvHg38v1,170 HLTOGAannotvHg38v1,182 HLTOGAannotvHg38v1,203 HLTOGAannotvHg38v1,217 HLTOGAannotvHg38v1,229 HLTOGAannotvHg38v1,248 cell uniprot,563 cells est,456 intronEst,537 cerevisiae augustusGene,222 certain nestedRepeats,294 rmsk,301 cesar HLTOGAannotvHg38v1,102 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainGalGal3,2 chainGalGal3,28 chainGalGal3,58 chainGalGal3,61 chainGalGal3,122 chainGalGal3,275 chainGalGal3,318 chainGalGal3,413 chainGalGal3,468 chainGalGal3,572 chainGalGal3,778 chainGalGal3,821 chainGalGal3,832 chainGalGal3,840 chainGalGal3,845 chainGalGal3,868 chainGalGal3,877 chainGalVar1,4 chainGalVar1,31 chainGalVar1,61 chainGalVar1,64 chainGalVar1,128 chainGalVar1,285 chainGalVar1,329 chainGalVar1,424 chainGalVar1,479 chainGalVar1,583 chainGalVar1,793 chainGalVar1,836 chainGalVar1,847 chainGalVar1,855 chainGalVar1,860 chainGalVar1,883 chainGalVar1,892 chainHg19,2 chainHg19,27 chainHg19,57 chainHg19,60 chainHg19,120 chainHg19,273 chainHg19,315 chainHg19,410 chainHg19,465 chainHg19,569 chainHg19,775 chainHg19,818 chainHg19,829 chainHg19,837 chainHg19,842 chainHg19,865 chainHg19,874 chainMm10,2 chainMm10,27 chainMm10,57 chainMm10,60 chainMm10,120 chainMm10,273 chainMm10,315 chainMm10,410 chainMm10,465 chainMm10,569 chainMm10,775 chainMm10,818 chainMm10,829 chainMm10,837 chainMm10,842 chainMm10,865 chainMm10,874 chainMm39,2 chainMm39,27 chainMm39,57 chainMm39,60 chainMm39,120 chainMm39,273 chainMm39,315 chainMm39,410 chainMm39,465 chainMm39,569 chainMm39,775 chainMm39,818 chainMm39,829 chainMm39,837 chainMm39,842 chainMm39,865 chainMm39,874 chainMonDom4,2 chainMonDom4,27 chainMonDom4,57 chainMonDom4,60 chainMonDom4,120 chainMonDom4,273 chainMonDom4,315 chainMonDom4,410 chainMonDom4,465 chainMonDom4,569 chainMonDom4,775 chainMonDom4,818 chainMonDom4,829 chainMonDom4,837 chainMonDom4,842 chainMonDom4,865 chainMonDom4,874 chainNetGalGal3,2 chainNetGalGal3,10 chainNetGalGal3,31 chainNetGalGal3,61 chainNetGalGal3,64 chainNetGalGal3,125 chainNetGalGal3,278 chainNetGalGal3,321 chainNetGalGal3,416 chainNetGalGal3,471 chainNetGalGal3,575 chainNetGalGal3,781 chainNetGalGal3,824 chainNetGalGal3,835 chainNetGalGal3,843 chainNetGalGal3,848 chainNetGalGal3,871 chainNetGalGal3,880 chainNetGalGal3Viewchain,1 chainNetGalGal3Viewchain,8 chainNetGalGal3Viewnet,8 chainNetGalVar1,4 chainNetGalVar1,13 chainNetGalVar1,34 chainNetGalVar1,64 chainNetGalVar1,67 chainNetGalVar1,131 chainNetGalVar1,288 chainNetGalVar1,332 chainNetGalVar1,427 chainNetGalVar1,482 chainNetGalVar1,586 chainNetGalVar1,796 chainNetGalVar1,839 chainNetGalVar1,850 chainNetGalVar1,858 chainNetGalVar1,863 chainNetGalVar1,886 chainNetGalVar1,895 chainNetGalVar1Viewchain,1 chainNetGalVar1Viewchain,9 chainNetGalVar1Viewnet,9 chainNetHg19,2 chainNetHg19,9 chainNetHg19,30 chainNetHg19,60 chainNetHg19,63 chainNetHg19,123 chainNetHg19,276 chainNetHg19,318 chainNetHg19,413 chainNetHg19,468 chainNetHg19,572 chainNetHg19,778 chainNetHg19,821 chainNetHg19,832 chainNetHg19,840 chainNetHg19,845 chainNetHg19,868 chainNetHg19,877 chainNetHg19Viewchain,1 chainNetHg19Viewchain,7 chainNetHg19Viewnet,7 chainNetMm10,8 chainNetMm10,29 chainNetMm10,59 chainNetMm10,62 chainNetMm10,122 chainNetMm10,275 chainNetMm10,317 chainNetMm10,412 chainNetMm10,467 chainNetMm10,571 chainNetMm10,777 chainNetMm10,820 chainNetMm10,831 chainNetMm10,839 chainNetMm10,844 chainNetMm10,867 chainNetMm10,876 chainNetMm10Viewchain,1 chainNetMm10Viewchain,7 chainNetMm10Viewnet,7 chainNetMm39,2 chainNetMm39,9 chainNetMm39,30 chainNetMm39,60 chainNetMm39,63 chainNetMm39,123 chainNetMm39,276 chainNetMm39,318 chainNetMm39,413 chainNetMm39,468 chainNetMm39,572 chainNetMm39,778 chainNetMm39,821 chainNetMm39,832 chainNetMm39,840 chainNetMm39,845 chainNetMm39,868 chainNetMm39,877 chainNetMm39Viewchain,1 chainNetMm39Viewchain,7 chainNetMm39Viewnet,7 chainNetMonDom4,2 chainNetMonDom4,9 chainNetMonDom4,30 chainNetMonDom4,60 chainNetMonDom4,63 chainNetMonDom4,123 chainNetMonDom4,276 chainNetMonDom4,318 chainNetMonDom4,413 chainNetMonDom4,468 chainNetMonDom4,572 chainNetMonDom4,778 chainNetMonDom4,821 chainNetMonDom4,832 chainNetMonDom4,840 chainNetMonDom4,845 chainNetMonDom4,868 chainNetMonDom4,877 chainNetMonDom4Viewchain,1 chainNetMonDom4Viewchain,7 chainNetMonDom4Viewnet,7 chainNetOryCun2,2 chainNetOryCun2,9 chainNetOryCun2,30 chainNetOryCun2,60 chainNetOryCun2,63 chainNetOryCun2,123 chainNetOryCun2,276 chainNetOryCun2,318 chainNetOryCun2,413 chainNetOryCun2,468 chainNetOryCun2,572 chainNetOryCun2,778 chainNetOryCun2,821 chainNetOryCun2,832 chainNetOryCun2,840 chainNetOryCun2,845 chainNetOryCun2,868 chainNetOryCun2,877 chainNetOryCun2Viewchain,1 chainNetOryCun2Viewchain,7 chainNetOryCun2Viewnet,7 chainNetRn6,2 chainNetRn6,10 chainNetRn6,31 chainNetRn6,61 chainNetRn6,64 chainNetRn6,125 chainNetRn6,278 chainNetRn6,321 chainNetRn6,416 chainNetRn6,471 chainNetRn6,575 chainNetRn6,781 chainNetRn6,824 chainNetRn6,835 chainNetRn6,843 chainNetRn6,848 chainNetRn6,871 chainNetRn6,880 chainNetRn6Viewchain,1 chainNetRn6Viewchain,8 chainNetRn6Viewnet,8 chainOryCun2,2 chainOryCun2,27 chainOryCun2,57 chainOryCun2,60 chainOryCun2,120 chainOryCun2,273 chainOryCun2,315 chainOryCun2,410 chainOryCun2,465 chainOryCun2,569 chainOryCun2,775 chainOryCun2,818 chainOryCun2,829 chainOryCun2,837 chainOryCun2,842 chainOryCun2,865 chainOryCun2,874 chainRn6,2 chainRn6,28 chainRn6,58 chainRn6,61 chainRn6,122 chainRn6,275 chainRn6,318 chainRn6,413 chainRn6,468 chainRn6,572 chainRn6,778 chainRn6,821 chainRn6,832 chainRn6,840 chainRn6,845 chainRn6,868 chainRn6,877 netGalGal3,28 netGalGal3,58 netGalGal3,61 netGalGal3,122 netGalGal3,275 netGalGal3,318 netGalGal3,413 netGalGal3,468 netGalGal3,572 netGalGal3,778 netGalGal3,821 netGalGal3,832 netGalGal3,840 netGalGal3,845 netGalGal3,868 netGalGal3,877 netGalVar1,31 netGalVar1,61 netGalVar1,64 netGalVar1,128 netGalVar1,285 netGalVar1,329 netGalVar1,424 netGalVar1,479 netGalVar1,583 netGalVar1,793 netGalVar1,836 netGalVar1,847 netGalVar1,855 netGalVar1,860 netGalVar1,883 netGalVar1,892 netHg19,27 netHg19,57 netHg19,60 netHg19,120 netHg19,273 netHg19,315 netHg19,410 netHg19,465 netHg19,569 netHg19,775 netHg19,818 netHg19,829 netHg19,837 netHg19,842 netHg19,865 netHg19,874 netMm10,27 netMm10,57 netMm10,60 netMm10,120 netMm10,273 netMm10,315 netMm10,410 netMm10,465 netMm10,569 netMm10,775 netMm10,818 netMm10,829 netMm10,837 netMm10,842 netMm10,865 netMm10,874 netMm39,27 netMm39,57 netMm39,60 netMm39,120 netMm39,273 netMm39,315 netMm39,410 netMm39,465 netMm39,569 netMm39,775 netMm39,818 netMm39,829 netMm39,837 netMm39,842 netMm39,865 netMm39,874 netMonDom4,27 netMonDom4,57 netMonDom4,60 netMonDom4,120 netMonDom4,273 netMonDom4,315 netMonDom4,410 netMonDom4,465 netMonDom4,569 netMonDom4,775 netMonDom4,818 netMonDom4,829 netMonDom4,837 netMonDom4,842 netMonDom4,865 netMonDom4,874 netOryCun2,27 netOryCun2,57 netOryCun2,60 netOryCun2,120 netOryCun2,273 netOryCun2,315 netOryCun2,410 netOryCun2,465 netOryCun2,569 netOryCun2,775 netOryCun2,818 netOryCun2,829 netOryCun2,837 netOryCun2,842 netOryCun2,865 netOryCun2,874 netRn6,28 netRn6,58 netRn6,61 netRn6,122 netRn6,275 netRn6,318 netRn6,413 netRn6,468 netRn6,572 netRn6,778 netRn6,821 netRn6,832 netRn6,840 netRn6,845 netRn6,868 netRn6,877 transMapV5,138 uniprot,290 chained blastHg18KG,7 blastHg18KG,88 chainGalGal3,9 chainGalVar1,12 chainHg19,8 chainMm10,8 chainMm39,8 chainMonDom4,8 chainOryCun2,8 chainRn6,9 chainnet chainGalGal3,795 chainGalGal3,1000 chainGalVar1,810 chainGalVar1,1015 chainHg19,792 chainHg19,997 chainMm10,792 chainMm10,997 chainMm39,792 chainMm39,997 chainMonDom4,792 chainMonDom4,997 chainNetGalGal3,798 chainNetGalGal3,1003 chainNetGalVar1,813 chainNetGalVar1,1018 chainNetHg19,795 chainNetHg19,1000 chainNetMm10,2 chainNetMm10,794 chainNetMm10,999 chainNetMm39,795 chainNetMm39,1000 chainNetMonDom4,795 chainNetMonDom4,1000 chainNetOryCun2,795 chainNetOryCun2,1000 chainNetRn6,798 chainNetRn6,1003 chainOryCun2,792 chainOryCun2,997 chainRn6,795 chainRn6,1000 netGalGal3,795 netGalGal3,1000 netGalVar1,810 netGalVar1,1015 netHg19,792 netHg19,997 netMm10,792 netMm10,997 netMm39,792 netMm39,997 netMonDom4,792 netMonDom4,997 netOryCun2,792 netOryCun2,997 netRn6,795 netRn6,1000 chains blastHg18KG,104 blastHg18KG,117 chainGalGal3,198 chainGalGal3,210 chainGalGal3,221 chainGalGal3,323 chainGalGal3,362 chainGalGal3,395 chainGalGal3,400 chainGalGal3,422 chainGalGal3,434 chainGalGal3,441 chainGalGal3,498 chainGalGal3,668 chainGalGal3,683 chainGalGal3,697 chainGalGal3,766 chainGalGal3,787 chainGalGal3,802 chainGalGal3,862 chainGalGal3,893 chainGalGal3,988 chainGalVar1,206 chainGalVar1,218 chainGalVar1,229 chainGalVar1,334 chainGalVar1,373 chainGalVar1,406 chainGalVar1,411 chainGalVar1,433 chainGalVar1,445 chainGalVar1,452 chainGalVar1,509 chainGalVar1,683 chainGalVar1,698 chainGalVar1,712 chainGalVar1,781 chainGalVar1,802 chainGalVar1,817 chainGalVar1,877 chainGalVar1,908 chainGalVar1,1003 chainHg19,196 chainHg19,208 chainHg19,219 chainHg19,320 chainHg19,359 chainHg19,392 chainHg19,397 chainHg19,419 chainHg19,431 chainHg19,438 chainHg19,495 chainHg19,665 chainHg19,680 chainHg19,694 chainHg19,763 chainHg19,784 chainHg19,799 chainHg19,859 chainHg19,890 chainHg19,985 chainMm10,196 chainMm10,208 chainMm10,219 chainMm10,320 chainMm10,359 chainMm10,392 chainMm10,397 chainMm10,419 chainMm10,431 chainMm10,438 chainMm10,495 chainMm10,665 chainMm10,680 chainMm10,694 chainMm10,763 chainMm10,784 chainMm10,799 chainMm10,859 chainMm10,890 chainMm10,985 chainMm39,196 chainMm39,208 chainMm39,219 chainMm39,320 chainMm39,359 chainMm39,392 chainMm39,397 chainMm39,419 chainMm39,431 chainMm39,438 chainMm39,495 chainMm39,665 chainMm39,680 chainMm39,694 chainMm39,763 chainMm39,784 chainMm39,799 chainMm39,859 chainMm39,890 chainMm39,985 chainMonDom4,196 chainMonDom4,208 chainMonDom4,219 chainMonDom4,320 chainMonDom4,359 chainMonDom4,392 chainMonDom4,397 chainMonDom4,419 chainMonDom4,431 chainMonDom4,438 chainMonDom4,495 chainMonDom4,665 chainMonDom4,680 chainMonDom4,694 chainMonDom4,763 chainMonDom4,784 chainMonDom4,799 chainMonDom4,859 chainMonDom4,890 chainMonDom4,985 chainNetGalGal3,201 chainNetGalGal3,213 chainNetGalGal3,224 chainNetGalGal3,326 chainNetGalGal3,365 chainNetGalGal3,398 chainNetGalGal3,403 chainNetGalGal3,425 chainNetGalGal3,437 chainNetGalGal3,444 chainNetGalGal3,501 chainNetGalGal3,671 chainNetGalGal3,686 chainNetGalGal3,700 chainNetGalGal3,769 chainNetGalGal3,790 chainNetGalGal3,805 chainNetGalGal3,865 chainNetGalGal3,896 chainNetGalGal3,991 chainNetGalVar1,209 chainNetGalVar1,221 chainNetGalVar1,232 chainNetGalVar1,337 chainNetGalVar1,376 chainNetGalVar1,409 chainNetGalVar1,414 chainNetGalVar1,436 chainNetGalVar1,448 chainNetGalVar1,455 chainNetGalVar1,512 chainNetGalVar1,686 chainNetGalVar1,701 chainNetGalVar1,715 chainNetGalVar1,784 chainNetGalVar1,805 chainNetGalVar1,820 chainNetGalVar1,880 chainNetGalVar1,911 chainNetGalVar1,1006 chainNetHg19,199 chainNetHg19,211 chainNetHg19,222 chainNetHg19,323 chainNetHg19,362 chainNetHg19,395 chainNetHg19,400 chainNetHg19,422 chainNetHg19,434 chainNetHg19,441 chainNetHg19,498 chainNetHg19,668 chainNetHg19,683 chainNetHg19,697 chainNetHg19,766 chainNetHg19,787 chainNetHg19,802 chainNetHg19,862 chainNetHg19,893 chainNetHg19,988 chainNetMm10,198 chainNetMm10,210 chainNetMm10,221 chainNetMm10,322 chainNetMm10,361 chainNetMm10,394 chainNetMm10,399 chainNetMm10,421 chainNetMm10,433 chainNetMm10,440 chainNetMm10,497 chainNetMm10,667 chainNetMm10,682 chainNetMm10,696 chainNetMm10,765 chainNetMm10,786 chainNetMm10,801 chainNetMm10,861 chainNetMm10,892 chainNetMm10,987 chainNetMm39,199 chainNetMm39,211 chainNetMm39,222 chainNetMm39,323 chainNetMm39,362 chainNetMm39,395 chainNetMm39,400 chainNetMm39,422 chainNetMm39,434 chainNetMm39,441 chainNetMm39,498 chainNetMm39,668 chainNetMm39,683 chainNetMm39,697 chainNetMm39,766 chainNetMm39,787 chainNetMm39,802 chainNetMm39,862 chainNetMm39,893 chainNetMm39,988 chainNetMonDom4,199 chainNetMonDom4,211 chainNetMonDom4,222 chainNetMonDom4,323 chainNetMonDom4,362 chainNetMonDom4,395 chainNetMonDom4,400 chainNetMonDom4,422 chainNetMonDom4,434 chainNetMonDom4,441 chainNetMonDom4,498 chainNetMonDom4,668 chainNetMonDom4,683 chainNetMonDom4,697 chainNetMonDom4,766 chainNetMonDom4,787 chainNetMonDom4,802 chainNetMonDom4,862 chainNetMonDom4,893 chainNetMonDom4,988 chainNetOryCun2,199 chainNetOryCun2,211 chainNetOryCun2,222 chainNetOryCun2,323 chainNetOryCun2,362 chainNetOryCun2,395 chainNetOryCun2,400 chainNetOryCun2,422 chainNetOryCun2,434 chainNetOryCun2,441 chainNetOryCun2,498 chainNetOryCun2,668 chainNetOryCun2,683 chainNetOryCun2,697 chainNetOryCun2,766 chainNetOryCun2,787 chainNetOryCun2,802 chainNetOryCun2,862 chainNetOryCun2,893 chainNetOryCun2,988 chainNetRn6,201 chainNetRn6,213 chainNetRn6,224 chainNetRn6,326 chainNetRn6,365 chainNetRn6,398 chainNetRn6,403 chainNetRn6,425 chainNetRn6,437 chainNetRn6,444 chainNetRn6,501 chainNetRn6,671 chainNetRn6,686 chainNetRn6,700 chainNetRn6,769 chainNetRn6,790 chainNetRn6,805 chainNetRn6,865 chainNetRn6,896 chainNetRn6,991 chainOryCun2,196 chainOryCun2,208 chainOryCun2,219 chainOryCun2,320 chainOryCun2,359 chainOryCun2,392 chainOryCun2,397 chainOryCun2,419 chainOryCun2,431 chainOryCun2,438 chainOryCun2,495 chainOryCun2,665 chainOryCun2,680 chainOryCun2,694 chainOryCun2,763 chainOryCun2,784 chainOryCun2,799 chainOryCun2,859 chainOryCun2,890 chainOryCun2,985 chainRn6,198 chainRn6,210 chainRn6,221 chainRn6,323 chainRn6,362 chainRn6,395 chainRn6,400 chainRn6,422 chainRn6,434 chainRn6,441 chainRn6,498 chainRn6,668 chainRn6,683 chainRn6,697 chainRn6,766 chainRn6,787 chainRn6,802 chainRn6,862 chainRn6,893 chainRn6,988 netGalGal3,198 netGalGal3,210 netGalGal3,221 netGalGal3,323 netGalGal3,362 netGalGal3,395 netGalGal3,400 netGalGal3,422 netGalGal3,434 netGalGal3,441 netGalGal3,498 netGalGal3,668 netGalGal3,683 netGalGal3,697 netGalGal3,766 netGalGal3,787 netGalGal3,802 netGalGal3,862 netGalGal3,893 netGalGal3,988 netGalVar1,206 netGalVar1,218 netGalVar1,229 netGalVar1,334 netGalVar1,373 netGalVar1,406 netGalVar1,411 netGalVar1,433 netGalVar1,445 netGalVar1,452 netGalVar1,509 netGalVar1,683 netGalVar1,698 netGalVar1,712 netGalVar1,781 netGalVar1,802 netGalVar1,817 netGalVar1,877 netGalVar1,908 netGalVar1,1003 netHg19,196 netHg19,208 netHg19,219 netHg19,320 netHg19,359 netHg19,392 netHg19,397 netHg19,419 netHg19,431 netHg19,438 netHg19,495 netHg19,665 netHg19,680 netHg19,694 netHg19,763 netHg19,784 netHg19,799 netHg19,859 netHg19,890 netHg19,985 netMm10,196 netMm10,208 netMm10,219 netMm10,320 netMm10,359 netMm10,392 netMm10,397 netMm10,419 netMm10,431 netMm10,438 netMm10,495 netMm10,665 netMm10,680 netMm10,694 netMm10,763 netMm10,784 netMm10,799 netMm10,859 netMm10,890 netMm10,985 netMm39,196 netMm39,208 netMm39,219 netMm39,320 netMm39,359 netMm39,392 netMm39,397 netMm39,419 netMm39,431 netMm39,438 netMm39,495 netMm39,665 netMm39,680 netMm39,694 netMm39,763 netMm39,784 netMm39,799 netMm39,859 netMm39,890 netMm39,985 netMonDom4,196 netMonDom4,208 netMonDom4,219 netMonDom4,320 netMonDom4,359 netMonDom4,392 netMonDom4,397 netMonDom4,419 netMonDom4,431 netMonDom4,438 netMonDom4,495 netMonDom4,665 netMonDom4,680 netMonDom4,694 netMonDom4,763 netMonDom4,784 netMonDom4,799 netMonDom4,859 netMonDom4,890 netMonDom4,985 netOryCun2,196 netOryCun2,208 netOryCun2,219 netOryCun2,320 netOryCun2,359 netOryCun2,392 netOryCun2,397 netOryCun2,419 netOryCun2,431 netOryCun2,438 netOryCun2,495 netOryCun2,665 netOryCun2,680 netOryCun2,694 netOryCun2,763 netOryCun2,784 netOryCun2,799 netOryCun2,859 netOryCun2,890 netOryCun2,985 netRn6,198 netRn6,210 netRn6,221 netRn6,323 netRn6,362 netRn6,395 netRn6,400 netRn6,422 netRn6,434 netRn6,441 netRn6,498 netRn6,668 netRn6,683 netRn6,697 netRn6,766 netRn6,787 netRn6,802 netRn6,862 netRn6,893 netRn6,988 transMapEnsemblV5,80 transMapEnsemblV5,198 transMapEnsemblV5,212 transMapEnsemblV5,258 transMapEnsemblV5,283 transMapEnsemblV5,331 transMapEnsemblV5,513 transMapEstV5,49 transMapEstV5,167 transMapEstV5,181 transMapEstV5,227 transMapEstV5,252 transMapEstV5,300 transMapEstV5,482 transMapRefSeqV5,49 transMapRefSeqV5,167 transMapRefSeqV5,181 transMapRefSeqV5,227 transMapRefSeqV5,252 transMapRefSeqV5,300 transMapRefSeqV5,482 transMapRnaV5,49 transMapRnaV5,167 transMapRnaV5,181 transMapRnaV5,227 transMapRnaV5,252 transMapRnaV5,300 transMapRnaV5,482 transMapV5,50 transMapV5,87 transMapV5,273 transMapV5,287 transMapV5,333 transMapV5,358 transMapV5,406 transMapV5,588 unipChain,1 unipChain,7 uniprot,288 chan tRNAs,366 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 est,125 intronEst,206 mrna,71 refSeqComposite,909 refSeqComposite,923 xenoMrna,145 changed rmsk,285 uniprot,1382 characteristic est,330 intronEst,411 mrna,276 xenoMrna,350 check chainGalGal3,345 chainGalVar1,356 chainHg19,342 chainMm10,342 chainMm39,342 chainMonDom4,342 chainNetGalGal3,348 chainNetGalVar1,359 chainNetHg19,345 chainNetMm10,344 chainNetMm39,345 chainNetMonDom4,345 chainNetOryCun2,345 chainNetRn6,348 chainOryCun2,342 chainRn6,345 netGalGal3,345 netGalVar1,356 netHg19,342 netMm10,342 netMm39,342 netMonDom4,342 netOryCun2,342 netRn6,345 check-box refSeqComposite,733 checkbox uniprot,231 chen ensGene,176 chiaromonte chainGalGal3,1033 chainGalVar1,1048 chainHg19,1030 chainMm10,1030 chainMm39,1030 chainMonDom4,1030 chainNetGalGal3,1036 chainNetGalVar1,1051 chainNetHg19,1033 chainNetMm10,1032 chainNetMm39,1033 chainNetMonDom4,1033 chainNetOryCun2,1033 chainNetRn6,1036 chainOryCun2,1030 chainRn6,1033 netGalGal3,1033 netGalVar1,1048 netHg19,1030 netMm10,1030 netMm39,1030 netMonDom4,1030 netOryCun2,1030 netRn6,1033 chicken HLTOGAannotvHg38v1,57 augustusGene,204 augustusGene,262 chainGalGal3,1 chainGalGal3,3 chainGalGal3,66 chainGalGal3,99 chainGalGal3,152 chainGalGal3,272 chainGalGal3,299 chainGalGal3,581 chainGalGal3,630 chainNetGalGal3,1 chainNetGalGal3,4 chainNetGalGal3,69 chainNetGalGal3,102 chainNetGalGal3,155 chainNetGalGal3,275 chainNetGalGal3,302 chainNetGalGal3,584 chainNetGalGal3,633 chainNetGalGal3Viewchain,2 chainNetGalGal3Viewnet,2 netGalGal3,1 netGalGal3,3 netGalGal3,66 netGalGal3,99 netGalGal3,152 netGalGal3,272 netGalGal3,299 netGalGal3,581 netGalGal3,630 chmod uniprot,1921 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 est,286 est,325 intronEst,367 intronEst,406 mrna,232 mrna,271 uniprot,657 xenoMrna,306 xenoMrna,345 chosen est,348 intronEst,429 mrna,294 refSeqComposite,538 xenoMrna,368 chr16 refSeqComposite,1558 chr4 chainGalGal3,377 chainGalVar1,388 chainHg19,374 chainMm10,374 chainMm39,374 chainMonDom4,374 chainNetGalGal3,380 chainNetGalVar1,391 chainNetHg19,377 chainNetMm10,376 chainNetMm39,377 chainNetMonDom4,377 chainNetOryCun2,377 chainNetRn6,380 chainOryCun2,374 chainRn6,377 netGalGal3,377 netGalVar1,388 netHg19,374 netMm10,374 netMm39,374 netMonDom4,374 netOryCun2,374 netRn6,377 chr6 transMapEnsemblV5,670 transMapEstV5,639 transMapRefSeqV5,639 transMapRnaV5,639 transMapV5,745 uniprot,1820 chris genscan,21 genscan,172 uniprot,1954 chrom refSeqComposite,1557 transMapEnsemblV5,669 transMapEstV5,638 transMapRefSeqV5,638 transMapRnaV5,638 transMapV5,744 uniprot,1819 chromosome chainGalGal3,251 chainGalGal3,332 chainGalGal3,357 chainGalGal3,365 chainGalGal3,375 chainGalGal3,384 chainGalGal3,531 chainGalGal3,546 chainGalGal3,562 chainGalGal3,631 chainGalGal3,637 chainGalVar1,259 chainGalVar1,343 chainGalVar1,368 chainGalVar1,376 chainGalVar1,386 chainGalVar1,395 chainGalVar1,542 chainGalVar1,557 chainGalVar1,573 chainGalVar1,646 chainGalVar1,652 chainHg19,249 chainHg19,329 chainHg19,354 chainHg19,362 chainHg19,372 chainHg19,381 chainHg19,528 chainHg19,543 chainHg19,559 chainHg19,628 chainHg19,634 chainMm10,249 chainMm10,329 chainMm10,354 chainMm10,362 chainMm10,372 chainMm10,381 chainMm10,528 chainMm10,543 chainMm10,559 chainMm10,628 chainMm10,634 chainMm39,249 chainMm39,329 chainMm39,354 chainMm39,362 chainMm39,372 chainMm39,381 chainMm39,528 chainMm39,543 chainMm39,559 chainMm39,628 chainMm39,634 chainMonDom4,249 chainMonDom4,329 chainMonDom4,354 chainMonDom4,362 chainMonDom4,372 chainMonDom4,381 chainMonDom4,528 chainMonDom4,543 chainMonDom4,559 chainMonDom4,628 chainMonDom4,634 chainNetGalGal3,254 chainNetGalGal3,335 chainNetGalGal3,360 chainNetGalGal3,368 chainNetGalGal3,378 chainNetGalGal3,387 chainNetGalGal3,534 chainNetGalGal3,549 chainNetGalGal3,565 chainNetGalGal3,634 chainNetGalGal3,640 chainNetGalVar1,262 chainNetGalVar1,346 chainNetGalVar1,371 chainNetGalVar1,379 chainNetGalVar1,389 chainNetGalVar1,398 chainNetGalVar1,545 chainNetGalVar1,560 chainNetGalVar1,576 chainNetGalVar1,649 chainNetGalVar1,655 chainNetHg19,252 chainNetHg19,332 chainNetHg19,357 chainNetHg19,365 chainNetHg19,375 chainNetHg19,384 chainNetHg19,531 chainNetHg19,546 chainNetHg19,562 chainNetHg19,631 chainNetHg19,637 chainNetMm10,251 chainNetMm10,331 chainNetMm10,356 chainNetMm10,364 chainNetMm10,374 chainNetMm10,383 chainNetMm10,530 chainNetMm10,545 chainNetMm10,561 chainNetMm10,630 chainNetMm10,636 chainNetMm39,252 chainNetMm39,332 chainNetMm39,357 chainNetMm39,365 chainNetMm39,375 chainNetMm39,384 chainNetMm39,531 chainNetMm39,546 chainNetMm39,562 chainNetMm39,631 chainNetMm39,637 chainNetMonDom4,252 chainNetMonDom4,332 chainNetMonDom4,357 chainNetMonDom4,365 chainNetMonDom4,375 chainNetMonDom4,384 chainNetMonDom4,531 chainNetMonDom4,546 chainNetMonDom4,562 chainNetMonDom4,631 chainNetMonDom4,637 chainNetOryCun2,252 chainNetOryCun2,332 chainNetOryCun2,357 chainNetOryCun2,365 chainNetOryCun2,375 chainNetOryCun2,384 chainNetOryCun2,531 chainNetOryCun2,546 chainNetOryCun2,562 chainNetOryCun2,631 chainNetOryCun2,637 chainNetRn6,254 chainNetRn6,335 chainNetRn6,360 chainNetRn6,368 chainNetRn6,378 chainNetRn6,387 chainNetRn6,534 chainNetRn6,549 chainNetRn6,565 chainNetRn6,634 chainNetRn6,640 chainOryCun2,249 chainOryCun2,329 chainOryCun2,354 chainOryCun2,362 chainOryCun2,372 chainOryCun2,381 chainOryCun2,528 chainOryCun2,543 chainOryCun2,559 chainOryCun2,628 chainOryCun2,634 chainRn6,251 chainRn6,332 chainRn6,357 chainRn6,365 chainRn6,375 chainRn6,384 chainRn6,531 chainRn6,546 chainRn6,562 chainRn6,631 chainRn6,637 cytoBandIdeo,1 netGalGal3,251 netGalGal3,332 netGalGal3,357 netGalGal3,365 netGalGal3,375 netGalGal3,384 netGalGal3,531 netGalGal3,546 netGalGal3,562 netGalGal3,631 netGalGal3,637 netGalVar1,259 netGalVar1,343 netGalVar1,368 netGalVar1,376 netGalVar1,386 netGalVar1,395 netGalVar1,542 netGalVar1,557 netGalVar1,573 netGalVar1,646 netGalVar1,652 netHg19,249 netHg19,329 netHg19,354 netHg19,362 netHg19,372 netHg19,381 netHg19,528 netHg19,543 netHg19,559 netHg19,628 netHg19,634 netMm10,249 netMm10,329 netMm10,354 netMm10,362 netMm10,372 netMm10,381 netMm10,528 netMm10,543 netMm10,559 netMm10,628 netMm10,634 netMm39,249 netMm39,329 netMm39,354 netMm39,362 netMm39,372 netMm39,381 netMm39,528 netMm39,543 netMm39,559 netMm39,628 netMm39,634 netMonDom4,249 netMonDom4,329 netMonDom4,354 netMonDom4,362 netMonDom4,372 netMonDom4,381 netMonDom4,528 netMonDom4,543 netMonDom4,559 netMonDom4,628 netMonDom4,634 netOryCun2,249 netOryCun2,329 netOryCun2,354 netOryCun2,362 netOryCun2,372 netOryCun2,381 netOryCun2,528 netOryCun2,543 netOryCun2,559 netOryCun2,628 netOryCun2,634 netRn6,251 netRn6,332 netRn6,357 netRn6,365 netRn6,375 netRn6,384 netRn6,531 netRn6,546 netRn6,562 netRn6,631 netRn6,637 ucscToRefSeq,15 uniprot,1416 chromosome-based chainGalGal3,325 chainGalVar1,336 chainHg19,322 chainMm10,322 chainMm39,322 chainMonDom4,322 chainNetGalGal3,328 chainNetGalVar1,339 chainNetHg19,325 chainNetMm10,324 chainNetMm39,325 chainNetMonDom4,325 chainNetOryCun2,325 chainNetRn6,328 chainOryCun2,322 chainRn6,325 netGalGal3,325 netGalVar1,336 netHg19,322 netMm10,322 netMm39,322 netMonDom4,322 netOryCun2,322 netRn6,325 circle rmsk,202 cite tRNAs,362 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cl transMapEnsemblV5,726 transMapEstV5,695 transMapRefSeqV5,695 transMapRnaV5,695 transMapV5,801 clark ensGene,178 est,751 intronEst,835 mrna,468 xenoMrna,542 class rmsk,199 rmsk,253 classes rmsk,150 classification HLTOGAannotvHg38v1,140 HLTOGAannotvHg38v1,304 rmsk,266 rmsk,282 classify HLTOGAannotvHg38v1,256 classifying HLTOGAannotvHg38v1,35 clawson gc5Base,83 quality,109 ucscToRefSeq,46 cleaved uniprot,249 click chainGalGal3,458 chainGalGal3,472 chainGalVar1,469 chainGalVar1,483 chainHg19,455 chainHg19,469 chainMm10,455 chainMm10,469 chainMm39,455 chainMm39,469 chainMonDom4,455 chainMonDom4,469 chainNetGalGal3,461 chainNetGalGal3,475 chainNetGalVar1,472 chainNetGalVar1,486 chainNetHg19,458 chainNetHg19,472 chainNetMm10,457 chainNetMm10,471 chainNetMm39,458 chainNetMm39,472 chainNetMonDom4,458 chainNetMonDom4,472 chainNetOryCun2,458 chainNetOryCun2,472 chainNetRn6,461 chainNetRn6,475 chainOryCun2,455 chainOryCun2,469 chainRn6,458 chainRn6,472 gc5Base,56 netGalGal3,458 netGalGal3,472 netGalVar1,469 netGalVar1,483 netHg19,455 netHg19,469 netMm10,455 netMm10,469 netMm39,455 netMm39,469 netMonDom4,455 netMonDom4,469 netOryCun2,455 netOryCun2,469 netRn6,458 netRn6,472 quality,72 refGene,149 refGene,253 refSeqComposite,751 refSeqComposite,773 transMapEnsemblV5,136 transMapEnsemblV5,150 transMapEstV5,105 transMapEstV5,119 transMapRefSeqV5,105 transMapRefSeqV5,119 transMapRnaV5,105 transMapRnaV5,119 transMapV5,211 transMapV5,225 uniprot,229 uniprot,481 uniprot,1673 xenoRefGene,110 xenoRefGene,214 clicking HLTOGAannotvHg38v1,294 uniprot,1633 clinical refSeqComposite,585 clipped nestedRepeats,224 cloned est,466 intronEst,547 closed gap,30 closer transMapEnsemblV5,68 transMapEstV5,37 transMapRefSeqV5,37 transMapRnaV5,37 transMapV5,36 closest augustusGene,241 cloverleaf tRNAs,312 clusters refSeqComposite,412 cm nscanGene,307 refGene,373 refSeqComposite,1763 xenoRefGene,333 code quality,104 refSeqComposite,1518 transMapEnsemblV5,624 transMapEnsemblV5,638 transMapEstV5,593 transMapEstV5,607 transMapRefSeqV5,593 transMapRefSeqV5,607 transMapRnaV5,593 transMapRnaV5,607 transMapV5,699 transMapV5,713 uniprot,1546 uniprot,1775 uniprot,1789 windowmaskerSdust,34 coding HLTOGAannotvHg38v1,113 HLTOGAannotvHg38v1,149 refGene,251 refSeqComposite,1084 simpleRepeat,38 uniprot,1102 uniprot,1133 xenoRefGene,212 codon genscan,100 genscan,122 mrna,332 mrna,357 refGene,177 refGene,184 refGene,199 refGene,229 refSeqComposite,720 refSeqComposite,814 refSeqComposite,821 refSeqComposite,836 refSeqComposite,866 transMapEnsemblV5,114 transMapEstV5,83 transMapRefSeqV5,83 transMapRnaV5,83 transMapV5,189 xenoMrna,406 xenoMrna,431 xenoRefGene,138 xenoRefGene,145 xenoRefGene,160 xenoRefGene,190 codons genscan,89 genscan,93 refGene,204 refGene,211 refSeqComposite,841 refSeqComposite,848 xenoRefGene,165 xenoRefGene,172 cognate transMapEnsemblV5,180 transMapEstV5,149 transMapRefSeqV5,149 transMapRnaV5,149 transMapV5,255 coiled-coil uniprot,367 collaborator refSeqComposite,647 collaborators refSeqComposite,691 collapsed nestedRepeats,173 collection refGene,35 refSeqComposite,32 xenoRefGene,33 color chainGalGal3,353 chainGalVar1,364 chainHg19,350 chainMm10,350 chainMm39,350 chainMonDom4,350 chainNetGalGal3,356 chainNetGalVar1,367 chainNetHg19,353 chainNetMm10,352 chainNetMm39,353 chainNetMonDom4,353 chainNetOryCun2,353 chainNetRn6,356 chainOryCun2,350 chainRn6,353 est,131 est,327 genscan,86 genscan,96 intronEst,212 intronEst,408 mrna,77 mrna,273 netGalGal3,353 netGalVar1,364 netHg19,350 netMm10,350 netMm39,350 netMonDom4,350 netOryCun2,350 netRn6,353 refGene,97 refGene,208 refSeqComposite,607 refSeqComposite,630 refSeqComposite,845 rmsk,207 xenoMrna,151 xenoMrna,347 xenoRefGene,58 xenoRefGene,169 color-coded HLTOGAannotvHg38v1,139 coloration gold,84 colored chainGalGal3,328 chainGalVar1,339 chainHg19,325 chainMm10,325 chainMm39,325 chainMonDom4,325 chainNetGalGal3,331 chainNetGalVar1,342 chainNetHg19,328 chainNetMm10,327 chainNetMm39,328 chainNetMonDom4,328 chainNetOryCun2,328 chainNetRn6,331 chainOryCun2,325 chainRn6,328 est,434 intronEst,515 mrna,373 netGalGal3,328 netGalVar1,339 netHg19,325 netMm10,325 netMm39,325 netMonDom4,325 netOryCun2,325 netRn6,328 transMapEnsemblV5,146 transMapEstV5,115 transMapRefSeqV5,115 transMapRnaV5,115 transMapV5,221 uniprot,160 uniprot,176 xenoMrna,447 coloring chainGalGal3,344 chainGalVar1,355 chainHg19,341 chainMm10,341 chainMm39,341 chainMonDom4,341 chainNetGalGal3,347 chainNetGalVar1,358 chainNetHg19,344 chainNetMm10,343 chainNetMm39,344 chainNetMonDom4,344 chainNetOryCun2,344 chainNetRn6,347 chainOryCun2,341 chainRn6,344 est,421 genscan,116 intronEst,502 mrna,333 mrna,360 netGalGal3,344 netGalVar1,355 netHg19,341 netMm10,341 netMm39,341 netMonDom4,341 netOryCun2,341 netRn6,344 refGene,178 refGene,185 refGene,223 refSeqComposite,815 refSeqComposite,822 refSeqComposite,860 transMapEnsemblV5,115 transMapEstV5,84 transMapRefSeqV5,84 transMapRnaV5,84 transMapV5,190 xenoMrna,407 xenoMrna,434 xenoRefGene,139 xenoRefGene,146 xenoRefGene,184 colors refGene,120 refGene,200 refSeqComposite,837 xenoRefGene,81 xenoRefGene,161 column nestedRepeats,107 refSeqComposite,1428 refSeqComposite,1439 columns transMapEnsemblV5,553 transMapEstV5,522 transMapRefSeqV5,522 transMapRnaV5,522 transMapV5,628 combination est,289 intronEst,370 mrna,235 xenoMrna,309 combinations xenoMrna,120 combined rmsk,232 combines nscanGene,40 nscanGene,116 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 refSeqComposite,1549 refSeqComposite,1613 transMapEnsemblV5,256 transMapEstV5,225 transMapRefSeqV5,225 transMapRnaV5,225 transMapV5,331 uniprot,1871 uniprot,1875 commands uniprot,1902 comment uniprot,260 uniprot,282 uniprot,531 uniprot,615 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 comparative chainGalGal3,11 chainGalVar1,14 chainHg19,10 chainMm10,10 chainMm39,10 chainMonDom4,10 chainNetGalGal3,14 chainNetGalGal3Viewchain,12 chainNetGalGal3Viewnet,12 chainNetGalVar1,17 chainNetGalVar1Viewchain,13 chainNetGalVar1Viewnet,13 chainNetHg19,13 chainNetHg19Viewchain,11 chainNetHg19Viewnet,11 chainNetMm10,12 chainNetMm10Viewchain,11 chainNetMm10Viewnet,11 chainNetMm39,13 chainNetMm39Viewchain,11 chainNetMm39Viewnet,11 chainNetMonDom4,13 chainNetMonDom4Viewchain,11 chainNetMonDom4Viewnet,11 chainNetOryCun2,13 chainNetOryCun2Viewchain,11 chainNetOryCun2Viewnet,11 chainNetRn6,14 chainNetRn6Viewchain,12 chainNetRn6Viewnet,12 chainOryCun2,10 chainRn6,11 netGalGal3,11 netGalVar1,14 netHg19,10 netMm10,10 netMm39,10 netMonDom4,10 netOryCun2,10 netRn6,11 transMapEnsemblV5,744 transMapEnsemblV5,799 transMapEstV5,713 transMapEstV5,768 transMapRefSeqV5,713 transMapRefSeqV5,768 transMapRnaV5,713 transMapRnaV5,768 transMapV5,819 transMapV5,874 compare mrna,342 refGene,194 refSeqComposite,831 transMapEnsemblV5,124 transMapEstV5,93 transMapRefSeqV5,93 transMapRnaV5,93 transMapV5,199 xenoMrna,416 xenoRefGene,155 compared transMapV5,154 comparison genscan,109 uniprot,1260 compiled refSeqComposite,1514 transMapEnsemblV5,620 transMapEstV5,589 transMapRefSeqV5,589 transMapRnaV5,589 transMapV5,695 uniprot,1771 complete genscan,213 completely refGene,176 refSeqComposite,813 uniprot,1464 xenoRefGene,137 complex chainGalGal3,166 chainGalVar1,174 chainHg19,164 chainMm10,164 chainMm39,164 chainMonDom4,164 chainNetGalGal3,169 chainNetGalVar1,177 chainNetHg19,167 chainNetMm10,166 chainNetMm39,167 chainNetMonDom4,167 chainNetOryCun2,167 chainNetRn6,169 chainOryCun2,164 chainRn6,166 netGalGal3,166 netGalVar1,174 netHg19,164 netMm10,164 netMm39,164 netMonDom4,164 netOryCun2,164 netRn6,166 complexity nestedRepeats,40 rmsk,30 rmsk,182 components gold,127 composed uniprot,1396 composite refSeqComposite,16 refSeqComposite,149 compositional genscan,41 uniprot,399 comput nscanGene,282 transMapEnsemblV5,812 transMapEstV5,781 transMapRefSeqV5,781 transMapRnaV5,781 transMapV5,887 computational genscan,196 nscanGene,25 nscanGene,231 uniprot,51 computed transMapEnsemblV5,228 transMapEstV5,197 transMapRefSeqV5,197 transMapRnaV5,197 transMapV5,303 comstock transMapEnsemblV5,725 transMapEstV5,694 transMapRefSeqV5,694 transMapRnaV5,694 transMapV5,800 concerning refGene,67 refSeqComposite,126 conditional augustusGene,118 configuration HLTOGAannotvHg38v1,131 chainGalGal3,317 chainGalVar1,328 chainHg19,314 chainMm10,314 chainMm39,314 chainMonDom4,314 chainNetGalGal3,320 chainNetGalVar1,331 chainNetHg19,317 chainNetMm10,316 chainNetMm39,317 chainNetMonDom4,317 chainNetOryCun2,317 chainNetRn6,320 chainOryCun2,314 chainRn6,317 est,49 gc5Base,60 gc5Base,69 genscan,64 genscan,84 intronEst,133 mrna,30 nestedRepeats,114 netGalGal3,317 netGalVar1,328 netHg19,314 netMm10,314 netMm39,314 netMonDom4,314 netOryCun2,314 netRn6,317 quality,75 quality,83 refGene,85 refSeqComposite,144 rmsk,138 transMapEnsemblV5,95 transMapEstV5,64 transMapRefSeqV5,64 transMapRnaV5,64 transMapV5,170 uniprot,235 uniprot,449 uniprot,650 uniprot,1755 xenoMrna,34 xenoRefGene,46 configured est,383 gc5Base,42 intronEst,464 mrna,329 quality,58 refGene,128 refSeqComposite,730 transMapEnsemblV5,111 transMapEstV5,80 transMapRefSeqV5,80 transMapRnaV5,80 transMapV5,186 xenoMrna,403 xenoRefGene,89 conflicts unipConflict,2 unipConflict,5 uniprot,373 connect uniprot,1677 conservation nscanGene,124 transMapEnsemblV5,232 transMapEstV5,201 transMapRefSeqV5,201 transMapRnaV5,201 transMapV5,307 considerable est,640 intronEst,721 considered intronEst,59 consistency uniprot,402 consortium uniprot,1986 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 refSeqComposite,1218 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult est,220 intronEst,301 mrna,166 xenoMrna,240 contact uniprot,686 uniprot,1440 contain transMapV5,14 uniprot,1163 contained chainGalGal3,894 chainGalVar1,909 chainHg19,891 chainMm10,891 chainMm39,891 chainMonDom4,891 chainNetGalGal3,897 chainNetGalVar1,912 chainNetHg19,894 chainNetMm10,893 chainNetMm39,894 chainNetMonDom4,894 chainNetOryCun2,894 chainNetRn6,897 chainOryCun2,891 chainRn6,894 netGalGal3,894 netGalVar1,909 netHg19,891 netMm10,891 netMm39,891 netMonDom4,891 netOryCun2,891 netRn6,894 refSeqComposite,1142 containing refSeqComposite,1658 transMapEnsemblV5,548 transMapEstV5,517 transMapRefSeqV5,517 transMapRnaV5,517 transMapV5,623 contains blastHg18KG,16 est,245 gap,85 intronEst,326 mrna,191 refGene,181 refSeqComposite,152 refSeqComposite,872 transMapEnsemblV5,17 transMapEstV5,15 transMapRefSeqV5,16 transMapRnaV5,16 xenoMrna,265 xenoRefGene,142 contamination est,628 intronEst,99 intronEst,709 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5Base,31 conterio tRNAs,472 context gap,116 context-dependent nscanGene,95 contig gap,118 gold,72 gold,141 contigs gap,52 gap,99 gap,133 gold,26 gold,29 gold,47 gold,64 gold,89 gold,106 control tRNAs,498 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 refGene,131 refSeqComposite,734 xenoRefGene,92 convenience uniprot,404 conventions HLTOGAannotvHg38v1,129 chainGalGal3,315 chainGalVar1,326 chainHg19,312 chainMm10,312 chainMm39,312 chainMonDom4,312 chainNetGalGal3,318 chainNetGalVar1,329 chainNetHg19,315 chainNetMm10,314 chainNetMm39,315 chainNetMonDom4,315 chainNetOryCun2,315 chainNetRn6,318 chainOryCun2,312 chainRn6,315 est,47 est,55 genscan,62 genscan,70 intronEst,131 intronEst,139 mrna,28 mrna,36 nestedRepeats,112 netGalGal3,315 netGalVar1,326 netHg19,312 netMm10,312 netMm39,312 netMonDom4,312 netOryCun2,312 netRn6,315 refGene,83 refGene,91 refSeqComposite,142 refSeqComposite,453 refSeqComposite,601 rmsk,136 transMapEnsemblV5,93 transMapEnsemblV5,101 transMapEstV5,62 transMapEstV5,70 transMapRefSeqV5,62 transMapRefSeqV5,70 transMapRnaV5,62 transMapRnaV5,70 transMapV5,168 transMapV5,176 uniprot,447 xenoMrna,32 xenoMrna,40 xenoRefGene,44 xenoRefGene,52 converted chainGalGal3,608 chainGalVar1,621 chainHg19,605 chainMm10,605 chainMm39,605 chainMonDom4,605 chainNetGalGal3,611 chainNetGalVar1,624 chainNetHg19,608 chainNetMm10,607 chainNetMm39,608 chainNetMonDom4,608 chainNetOryCun2,608 chainNetRn6,611 chainOryCun2,605 chainRn6,608 netGalGal3,608 netGalVar1,621 netHg19,605 netMm10,605 netMm39,605 netMonDom4,605 netOryCun2,605 netRn6,608 refSeqComposite,1174 refSeqComposite,1588 uniprot,1477 uniprot,1760 coordinates refSeqComposite,37 refSeqComposite,68 uniprot,29 uniprot,643 uniprot,1848 uniprot,1855 uniprot,1886 uniprot,1892 copies microsat,80 copy uniprot,419 correct uniprot,962 uniprot,1222 corrections refGene,62 refSeqComposite,121 corresponding transMapEnsemblV5,259 transMapEstV5,228 transMapRefSeqV5,228 transMapRnaV5,228 transMapV5,334 corresponds est,228 intronEst,309 mrna,174 xenoMrna,248 could refSeqComposite,969 refSeqComposite,1545 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 covariance tRNAs,60 tRNAs,402 cove tRNAs,64 cove-predicted tRNAs,341 cover est,561 intronEst,642 coverage uniprot,1485 covered chainGalGal3,817 chainGalVar1,832 chainHg19,814 chainMm10,814 chainMm39,814 chainMonDom4,814 chainNetGalGal3,820 chainNetGalVar1,835 chainNetHg19,817 chainNetMm10,816 chainNetMm39,817 chainNetMonDom4,817 chainNetOryCun2,817 chainNetRn6,820 chainOryCun2,814 chainRn6,817 netGalGal3,817 netGalVar1,832 netHg19,814 netMm10,814 netMm39,814 netMonDom4,814 netOryCun2,814 netRn6,817 cow transMapEnsemblV5,451 transMapEstV5,420 transMapRefSeqV5,420 transMapRnaV5,420 transMapV5,526 cox ensGene,180 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create nscanGene,184 refSeqComposite,310 windowmaskerSdust,48 created chainGalGal3,992 chainGalVar1,1007 chainHg19,989 chainMm10,989 chainMm39,989 chainMonDom4,989 chainNetGalGal3,995 chainNetGalVar1,1010 chainNetHg19,992 chainNetMm10,991 chainNetMm39,992 chainNetMonDom4,992 chainNetOryCun2,992 chainNetRn6,995 chainOryCun2,989 chainRn6,992 microsat,89 netGalGal3,992 netGalVar1,1007 netHg19,989 netMm10,989 netMm39,989 netMonDom4,989 netOryCun2,989 netRn6,992 refSeqComposite,102 refSeqComposite,1153 rmsk,13 transMapEnsemblV5,74 transMapEstV5,43 transMapRefSeqV5,43 transMapRnaV5,43 transMapV5,42 uniprot,824 uniprot,1942 creates chainGalGal3,642 chainGalVar1,657 chainHg19,639 chainMm10,639 chainMm39,639 chainMonDom4,639 chainNetGalGal3,645 chainNetGalVar1,660 chainNetHg19,642 chainNetMm10,641 chainNetMm39,642 chainNetMonDom4,642 chainNetOryCun2,642 chainNetRn6,645 chainOryCun2,639 chainRn6,642 netGalGal3,642 netGalVar1,657 netHg19,639 netMm10,639 netMm39,639 netMonDom4,639 netOryCun2,639 netRn6,642 creating nscanGene,102 credits HLTOGAannotvHg38v1,314 augustusGene,247 blastHg18KG,139 chainGalGal3,918 chainGalVar1,933 chainHg19,915 chainMm10,915 chainMm39,915 chainMonDom4,915 chainNetGalGal3,921 chainNetGalVar1,936 chainNetHg19,918 chainNetMm10,917 chainNetMm39,918 chainNetMonDom4,918 chainNetOryCun2,918 chainNetRn6,921 chainOryCun2,915 chainRn6,918 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 ensGene,145 est,725 gc5Base,71 genscan,169 intronEst,809 microsat,104 mrna,441 nestedRepeats,302 netGalGal3,918 netGalVar1,933 netHg19,915 netMm10,915 netMm39,915 netMonDom4,915 netOryCun2,915 netRn6,918 nscanGene,225 quality,85 refGene,319 refSeqComposite,1711 rmsk,325 simpleRepeat,66 tRNAs,328 transMapEnsemblV5,676 transMapEstV5,645 transMapRefSeqV5,645 transMapRnaV5,645 transMapV5,751 ucscToRefSeq,36 uniprot,1938 xenoMrna,515 xenoRefGene,280 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 est,303 est,321 est,359 est,377 intronEst,384 intronEst,402 intronEst,440 intronEst,458 mrna,249 mrna,267 mrna,305 mrna,323 transMapEnsemblV5,359 transMapEstV5,328 transMapRefSeqV5,328 transMapRnaV5,328 transMapV5,434 xenoMrna,323 xenoMrna,341 xenoMrna,379 xenoMrna,397 cross-species transMapEnsemblV5,26 transMapEstV5,24 transMapRefSeqV5,24 transMapRnaV5,24 transMapV5,23 cruz chainGalGal3,968 chainGalGal3,1013 chainGalVar1,983 chainGalVar1,1028 chainHg19,965 chainHg19,1010 chainMm10,965 chainMm10,1010 chainMm39,965 chainMm39,1010 chainMonDom4,965 chainMonDom4,1010 chainNetGalGal3,971 chainNetGalGal3,1016 chainNetGalVar1,986 chainNetGalVar1,1031 chainNetHg19,968 chainNetHg19,1013 chainNetMm10,967 chainNetMm10,1012 chainNetMm39,968 chainNetMm39,1013 chainNetMonDom4,968 chainNetMonDom4,1013 chainNetOryCun2,968 chainNetOryCun2,1013 chainNetRn6,971 chainNetRn6,1016 chainOryCun2,965 chainOryCun2,1010 chainRn6,968 chainRn6,1013 netGalGal3,968 netGalGal3,1013 netGalVar1,983 netGalVar1,1028 netHg19,965 netHg19,1010 netMm10,965 netMm10,1010 netMm39,965 netMm39,1010 netMonDom4,965 netMonDom4,1010 netOryCun2,965 netOryCun2,1010 netRn6,968 netRn6,1013 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 cuff ensGene,182 culex augustusGene,220 curated ncbiRefSeq,6 ncbiRefSeqCurated,2 ncbiRefSeqCurated,6 refGene,335 refGene,413 refSeqComposite,88 refSeqComposite,202 refSeqComposite,210 refSeqComposite,251 refSeqComposite,315 refSeqComposite,400 refSeqComposite,422 refSeqComposite,471 refSeqComposite,523 refSeqComposite,556 refSeqComposite,591 refSeqComposite,1413 refSeqComposite,1673 refSeqComposite,1725 refSeqComposite,1803 uniprot,35 uniprot,110 uniprot,142 xenoRefGene,296 xenoRefGene,373 curator rmsk,261 curr nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current est,163 intronEst,244 mrna,109 nestedRepeats,250 uniprot,1296 uniprot,1575 uniprot,1692 uniprot,1712 xenoMrna,183 currently gold,69 nscanGene,177 nscanGene,260 refSeqComposite,475 curwen ensGene,184 cutoff refSeqComposite,942 cytoplamsic uniprot,518 cytoplasmic unipLocCytopl,1 unipLocCytopl,3 uniprot,276 uniprot,284 uniprot,569 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5Base,24 d HLTOGAannotvHg38v1,341 augustusGene,293 chainGalGal3,1060 chainGalGal3,1104 chainGalVar1,1075 chainGalVar1,1119 chainHg19,1057 chainHg19,1101 chainMm10,1057 chainMm10,1101 chainMm39,1057 chainMm39,1101 chainMonDom4,1057 chainMonDom4,1101 chainNetGalGal3,1063 chainNetGalGal3,1107 chainNetGalVar1,1078 chainNetGalVar1,1122 chainNetHg19,1060 chainNetHg19,1104 chainNetMm10,1059 chainNetMm10,1103 chainNetMm39,1060 chainNetMm39,1104 chainNetMonDom4,1060 chainNetMonDom4,1104 chainNetOryCun2,1060 chainNetOryCun2,1104 chainNetRn6,1063 chainNetRn6,1107 chainOryCun2,1057 chainOryCun2,1101 chainRn6,1060 chainRn6,1104 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 ensGene,171 genscan,192 netGalGal3,1060 netGalGal3,1104 netGalVar1,1075 netGalVar1,1119 netHg19,1057 netHg19,1101 netMm10,1057 netMm10,1101 netMm39,1057 netMm39,1101 netMonDom4,1057 netMonDom4,1101 netOryCun2,1057 netOryCun2,1101 netRn6,1060 netRn6,1104 nscanGene,342 transMapEnsemblV5,764 transMapEnsemblV5,798 transMapEstV5,733 transMapEstV5,767 transMapRefSeqV5,733 transMapRefSeqV5,767 transMapRnaV5,733 transMapRnaV5,767 transMapV5,839 transMapV5,873 d23-6 est,796 intronEst,880 mrna,513 xenoMrna,587 d36-42 est,770 intronEst,854 mrna,487 xenoMrna,561 d501-4 refGene,431 refSeqComposite,1821 xenoRefGene,391 d71-5 uniprot,2005 d756-63 refGene,397 refSeqComposite,1787 xenoRefGene,357 d93-7 tRNAs,389 da est,748 est,776 intronEst,832 intronEst,860 mrna,465 mrna,493 xenoMrna,539 xenoMrna,567 dark refGene,114 refSeqComposite,625 unipAliSwissprot,10 uniprot,162 uniprot,582 uniprot,587 xenoRefGene,75 darker intronEst,148 darkly est,69 mrna,50 xenoMrna,54 data HLTOGAannotvHg38v1,316 cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 ensGene,55 ensGene,59 ensGene,70 ensGene,102 est,735 gap,64 gap,155 gc5Base,73 intronEst,819 microsat,47 mrna,452 nestedRepeats,263 nestedRepeats,280 nscanGene,242 refGene,38 refGene,329 refSeqComposite,154 refSeqComposite,656 refSeqComposite,1157 refSeqComposite,1163 refSeqComposite,1290 refSeqComposite,1294 refSeqComposite,1316 refSeqComposite,1368 refSeqComposite,1653 refSeqComposite,1719 rmsk,126 rmsk,287 tRNAs,360 transMapEnsemblV5,518 transMapEnsemblV5,522 transMapEnsemblV5,536 transMapEnsemblV5,573 transMapEnsemblV5,577 transMapEnsemblV5,691 transMapEstV5,487 transMapEstV5,491 transMapEstV5,505 transMapEstV5,542 transMapEstV5,546 transMapEstV5,660 transMapRefSeqV5,487 transMapRefSeqV5,491 transMapRefSeqV5,505 transMapRefSeqV5,542 transMapRefSeqV5,546 transMapRefSeqV5,660 transMapRnaV5,487 transMapRnaV5,491 transMapRnaV5,505 transMapRnaV5,542 transMapRnaV5,546 transMapRnaV5,660 transMapV5,593 transMapV5,597 transMapV5,611 transMapV5,648 transMapV5,652 transMapV5,766 ucscToRefSeq,28 ucscToRefSeq,38 uniprot,32 uniprot,45 uniprot,892 uniprot,895 uniprot,1683 uniprot,1705 uniprot,1709 uniprot,1724 uniprot,1837 uniprot,1980 xenoMrna,526 xenoRefGene,36 xenoRefGene,290 database chainGalGal3,984 chainGalVar1,999 chainHg19,981 chainMm10,981 chainMm39,981 chainMonDom4,981 chainNetGalGal3,987 chainNetGalVar1,1002 chainNetHg19,984 chainNetMm10,983 chainNetMm39,984 chainNetMonDom4,984 chainNetOryCun2,984 chainNetRn6,987 chainOryCun2,981 chainRn6,984 ensGene,193 est,768 est,794 intronEst,852 intronEst,878 mrna,485 mrna,511 nestedRepeats,345 netGalGal3,984 netGalVar1,999 netHg19,981 netMm10,981 netMm39,981 netMonDom4,981 netOryCun2,981 netRn6,984 quality,99 refGene,395 refGene,416 refGene,429 refSeqComposite,564 refSeqComposite,1403 refSeqComposite,1785 refSeqComposite,1806 refSeqComposite,1819 rmsk,125 rmsk,368 tRNAs,110 tRNAs,372 tRNAs,387 transMapEnsemblV5,166 transMapEstV5,135 transMapRefSeqV5,135 transMapRnaV5,135 transMapV5,241 ucscToRefSeq,25 ucscToRefSeq,35 uniprot,25 uniprot,821 uniprot,2003 uniprot,2031 xenoMrna,559 xenoMrna,585 xenoRefGene,355 xenoRefGene,376 xenoRefGene,389 databases est,615 est,742 intronEst,103 intronEst,696 intronEst,826 mrna,459 refSeqComposite,279 refSeqComposite,426 tRNAs,489 transMapEnsemblV5,698 transMapEstV5,667 transMapRefSeqV5,667 transMapRnaV5,667 transMapV5,773 xenoMrna,533 dataset refSeqComposite,532 david chainGalGal3,978 chainGalVar1,993 chainHg19,975 chainMm10,975 chainMm39,975 chainMonDom4,975 chainNetGalGal3,981 chainNetGalVar1,996 chainNetHg19,978 chainNetMm10,977 chainNetMm39,978 chainNetMonDom4,978 chainNetOryCun2,978 chainNetRn6,981 chainOryCun2,975 chainRn6,978 netGalGal3,978 netGalVar1,993 netHg19,975 netMm10,975 netMm39,975 netMonDom4,975 netOryCun2,975 netRn6,978 davis transMapEnsemblV5,727 transMapEstV5,696 transMapRefSeqV5,696 transMapRnaV5,696 transMapV5,802 db nscanGene,309 de augustusGene,303 nscanGene,57 transMapEnsemblV5,774 transMapEstV5,743 transMapRefSeqV5,743 transMapRnaV5,743 transMapV5,849 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainMm10,4 chainMm10,66 chainMm10,306 chainNetMm10,4 chainNetMm10,68 chainNetMm10,308 chainNetMm10Viewchain,3 chainNetMm10Viewnet,3 nestedRepeats,389 nestedRepeats,411 netMm10,4 netMm10,66 netMm10,306 rmsk,412 rmsk,434 transMapEnsemblV5,749 transMapEnsemblV5,815 transMapEstV5,718 transMapEstV5,784 transMapRefSeqV5,718 transMapRefSeqV5,784 transMapRnaV5,718 transMapRnaV5,784 transMapV5,824 transMapV5,890 default chainGalGal3,321 chainGalVar1,332 chainHg19,318 chainMm10,318 chainMm39,318 chainMonDom4,318 chainNetGalGal3,324 chainNetGalVar1,335 chainNetHg19,321 chainNetMm10,320 chainNetMm39,321 chainNetMonDom4,321 chainNetOryCun2,321 chainNetRn6,324 chainOryCun2,318 chainRn6,321 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netGalGal3,321 netGalVar1,332 netHg19,318 netMm10,318 netMm39,318 netMonDom4,318 netOryCun2,318 netRn6,321 refGene,142 refGene,235 refSeqComposite,766 refSeqComposite,1040 refSeqComposite,1067 uniprot,225 xenoRefGene,103 xenoRefGene,196 defined refSeqComposite,627 uniprot,305 uniprot,1387 degraded est,530 intronEst,611 degree est,625 intronEst,706 delcher nscanGene,293 deletion chainGalGal3,149 chainGalGal3,1065 chainGalVar1,155 chainGalVar1,1080 chainHg19,147 chainHg19,1062 chainMm10,147 chainMm10,1062 chainMm39,147 chainMm39,1062 chainMonDom4,147 chainMonDom4,1062 chainNetGalGal3,152 chainNetGalGal3,1068 chainNetGalVar1,158 chainNetGalVar1,1083 chainNetHg19,150 chainNetHg19,1065 chainNetMm10,149 chainNetMm10,1064 chainNetMm39,150 chainNetMm39,1065 chainNetMonDom4,150 chainNetMonDom4,1065 chainNetOryCun2,150 chainNetOryCun2,1065 chainNetRn6,152 chainNetRn6,1068 chainOryCun2,147 chainOryCun2,1062 chainRn6,149 chainRn6,1065 est,443 intronEst,524 mrna,382 netGalGal3,149 netGalGal3,1065 netGalVar1,155 netGalVar1,1080 netHg19,147 netHg19,1062 netMm10,147 netMm10,1062 netMm39,147 netMm39,1062 netMonDom4,147 netMonDom4,1062 netOryCun2,147 netOryCun2,1062 netRn6,149 netRn6,1065 refSeqComposite,950 refSeqComposite,1046 refSeqComposite,1073 rmsk,220 xenoMrna,456 deletions chainGalGal3,117 chainGalGal3,181 chainGalVar1,123 chainGalVar1,189 chainHg19,115 chainHg19,179 chainMm10,115 chainMm10,179 chainMm39,115 chainMm39,179 chainMonDom4,115 chainMonDom4,179 chainNetGalGal3,120 chainNetGalGal3,184 chainNetGalVar1,126 chainNetGalVar1,192 chainNetHg19,118 chainNetHg19,182 chainNetMm10,117 chainNetMm10,181 chainNetMm39,118 chainNetMm39,182 chainNetMonDom4,118 chainNetMonDom4,182 chainNetOryCun2,118 chainNetOryCun2,182 chainNetRn6,120 chainNetRn6,184 chainOryCun2,115 chainOryCun2,179 chainRn6,117 chainRn6,181 netGalGal3,117 netGalGal3,181 netGalVar1,123 netGalVar1,189 netHg19,115 netHg19,179 netMm10,115 netMm10,179 netMm39,115 netMm39,179 netMonDom4,115 netMonDom4,179 netOryCun2,115 netOryCun2,179 netRn6,117 netRn6,181 nscanGene,100 dense est,61 gold,58 intronEst,145 mrna,42 nestedRepeats,157 nestedRepeats,168 xenoMrna,46 dependencies genscan,183 depending uniprot,442 uniprot,808 depicts gap,10 gold,62 windowmaskerSdust,15 deposited est,602 intronEst,683 deprecated uniprot,1044 derived chainGalGal3,768 chainGalVar1,783 chainHg19,765 chainMm10,765 chainMm39,765 chainMonDom4,765 chainNetGalGal3,771 chainNetGalVar1,786 chainNetHg19,768 chainNetMm10,767 chainNetMm39,768 chainNetMonDom4,768 chainNetOryCun2,768 chainNetRn6,771 chainOryCun2,765 chainRn6,768 netGalGal3,768 netGalVar1,783 netHg19,765 netMm10,765 netMm39,765 netMonDom4,765 netOryCun2,765 netRn6,768 tRNAs,129 uniprot,830 described chainGalGal3,775 chainGalVar1,790 chainHg19,772 chainMm10,772 chainMm39,772 chainMonDom4,772 chainNetGalGal3,778 chainNetGalVar1,793 chainNetHg19,775 chainNetMm10,774 chainNetMm39,775 chainNetMonDom4,775 chainNetOryCun2,775 chainNetRn6,778 chainOryCun2,772 chainRn6,775 genscan,161 nestedRepeats,60 nestedRepeats,338 netGalGal3,775 netGalVar1,790 netHg19,772 netMm10,772 netMm39,772 netMonDom4,772 netOryCun2,772 netRn6,775 refSeqComposite,1642 rmsk,96 rmsk,361 uniprot,1524 describes augustusGene,226 describing refSeqComposite,255 description HLTOGAannotvHg38v1,15 augustusGene,12 blastHg18KG,13 chainGalGal3,13 chainGalGal3,780 chainGalVar1,16 chainGalVar1,795 chainHg19,12 chainHg19,777 chainMm10,12 chainMm10,777 chainMm39,12 chainMm39,777 chainMonDom4,12 chainMonDom4,777 chainNetGalGal3,16 chainNetGalGal3,783 chainNetGalVar1,19 chainNetGalVar1,798 chainNetHg19,15 chainNetHg19,780 chainNetMm10,14 chainNetMm10,779 chainNetMm39,15 chainNetMm39,780 chainNetMonDom4,15 chainNetMonDom4,780 chainNetOryCun2,15 chainNetOryCun2,780 chainNetRn6,16 chainNetRn6,783 chainOryCun2,12 chainOryCun2,777 chainRn6,13 chainRn6,780 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ensGene,9 ensGene,32 est,12 est,112 gap,7 gc5Base,11 genscan,10 genscan,77 genscan,133 gold,8 intronEst,13 intronEst,193 microsat,10 mrna,12 mrna,58 nestedRepeats,14 netGalGal3,13 netGalGal3,780 netGalVar1,16 netGalVar1,795 netHg19,12 netHg19,777 netMm10,12 netMm10,777 netMm39,12 netMm39,777 netMonDom4,12 netMonDom4,777 netOryCun2,12 netOryCun2,777 netRn6,13 netRn6,780 nscanGene,9 quality,11 refGene,15 refGene,138 refSeqComposite,11 refSeqComposite,741 rmsk,9 simpleRepeat,11 tRNAs,13 transMapEnsemblV5,14 transMapEnsemblV5,234 transMapEstV5,12 transMapEstV5,203 transMapRefSeqV5,13 transMapRefSeqV5,203 transMapRnaV5,13 transMapRnaV5,203 transMapV5,11 transMapV5,309 ucscToRefSeq,8 uniprot,11 uniprot,106 windowmaskerSdust,12 xenoMrna,11 xenoMrna,132 xenoRefGene,11 xenoRefGene,99 descriptions augustusGene,91 designed refSeqComposite,1441 uniprot,1355 desired est,288 intronEst,369 mrna,234 xenoMrna,308 destination transMapEnsemblV5,417 transMapEstV5,386 transMapRefSeqV5,386 transMapRnaV5,386 transMapV5,492 destined uniprot,244 destuniq transMapEnsemblV5,436 transMapEstV5,405 transMapRefSeqV5,405 transMapRnaV5,405 transMapV5,511 detail genscan,164 detailed augustusGene,90 chainGalGal3,464 chainGalGal3,483 chainGalVar1,475 chainGalVar1,494 chainHg19,461 chainHg19,480 chainMm10,461 chainMm10,480 chainMm39,461 chainMm39,480 chainMonDom4,461 chainMonDom4,480 chainNetGalGal3,467 chainNetGalGal3,486 chainNetGalVar1,478 chainNetGalVar1,497 chainNetHg19,464 chainNetHg19,483 chainNetMm10,463 chainNetMm10,482 chainNetMm39,464 chainNetMm39,483 chainNetMonDom4,464 chainNetMonDom4,483 chainNetOryCun2,464 chainNetOryCun2,483 chainNetRn6,467 chainNetRn6,486 chainOryCun2,461 chainOryCun2,480 chainRn6,464 chainRn6,483 nestedRepeats,70 netGalGal3,464 netGalGal3,483 netGalVar1,475 netGalVar1,494 netHg19,461 netHg19,480 netMm10,461 netMm10,480 netMm39,461 netMm39,480 netMonDom4,461 netMonDom4,480 netOryCun2,461 netOryCun2,480 netRn6,464 netRn6,483 rmsk,37 tRNAs,97 uniprot,692 details refSeqComposite,95 refSeqComposite,1126 rmsk,119 transMapEnsemblV5,236 transMapEstV5,205 transMapRefSeqV5,205 transMapRnaV5,205 transMapV5,311 uniprot,499 uniprot,771 uniprot,1157 uniprot,1584 detected tRNAs,377 detection tRNAs,39 tRNAs,449 determination transMapEnsemblV5,274 transMapEstV5,243 transMapRefSeqV5,243 transMapRnaV5,243 transMapV5,349 determine HLTOGAannotvHg38v1,107 transMapV5,91 determined windowmaskerSdust,19 determining chainGalGal3,488 chainGalVar1,499 chainHg19,485 chainMm10,485 chainMm39,485 chainMonDom4,485 chainNetGalGal3,491 chainNetGalVar1,502 chainNetHg19,488 chainNetMm10,487 chainNetMm39,488 chainNetMonDom4,488 chainNetOryCun2,488 chainNetRn6,491 chainOryCun2,485 chainRn6,488 netGalGal3,488 netGalVar1,499 netHg19,485 netMm10,485 netMm39,485 netMonDom4,485 netOryCun2,485 netRn6,488 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed chainGalGal3,925 chainGalGal3,960 chainGalGal3,1006 chainGalVar1,940 chainGalVar1,975 chainGalVar1,1021 chainHg19,922 chainHg19,957 chainHg19,1003 chainMm10,922 chainMm10,957 chainMm10,1003 chainMm39,922 chainMm39,957 chainMm39,1003 chainMonDom4,922 chainMonDom4,957 chainMonDom4,1003 chainNetGalGal3,928 chainNetGalGal3,963 chainNetGalGal3,1009 chainNetGalVar1,943 chainNetGalVar1,978 chainNetGalVar1,1024 chainNetHg19,925 chainNetHg19,960 chainNetHg19,1006 chainNetMm10,924 chainNetMm10,959 chainNetMm10,1005 chainNetMm39,925 chainNetMm39,960 chainNetMm39,1006 chainNetMonDom4,925 chainNetMonDom4,960 chainNetMonDom4,1006 chainNetOryCun2,925 chainNetOryCun2,960 chainNetOryCun2,1006 chainNetRn6,928 chainNetRn6,963 chainNetRn6,1009 chainOryCun2,922 chainOryCun2,957 chainOryCun2,1003 chainRn6,925 chainRn6,960 chainRn6,1006 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 netGalGal3,925 netGalGal3,960 netGalGal3,1006 netGalVar1,940 netGalVar1,975 netGalVar1,1021 netHg19,922 netHg19,957 netHg19,1003 netMm10,922 netMm10,957 netMm10,1003 netMm39,922 netMm39,957 netMm39,1003 netMonDom4,922 netMonDom4,957 netMonDom4,1003 netOryCun2,922 netOryCun2,957 netOryCun2,1003 netRn6,925 netRn6,960 netRn6,1006 nscanGene,133 dfam rmsk,112 dg HLTOGAannotvHg38v1,351 di-nucleotide microsat,3 microsat,32 diagnostics refSeqComposite,586 dieci tRNAs,476 diekhans augustusGene,288 transMapEnsemblV5,683 transMapEnsemblV5,716 transMapEnsemblV5,759 transMapEnsemblV5,791 transMapEstV5,652 transMapEstV5,685 transMapEstV5,728 transMapEstV5,760 transMapRefSeqV5,652 transMapRefSeqV5,685 transMapRefSeqV5,728 transMapRefSeqV5,760 transMapRnaV5,652 transMapRnaV5,685 transMapRnaV5,728 transMapRnaV5,760 transMapV5,758 transMapV5,791 transMapV5,834 transMapV5,866 uniprot,1540 uniprot,1957 diemand uniprot,2014 differ est,406 intronEst,487 refSeqComposite,288 uniprot,746 uniprot,1131 difference uniprot,1251 differences ncbiRefSeqGenomicDiff,3 refSeqComposite,64 refSeqComposite,461 refSeqComposite,892 refSeqComposite,961 uniprot,374 uniprot,921 uniprot,1370 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainGalGal3,563 chainGalVar1,574 chainHg19,560 chainMm10,560 chainMm39,560 chainMonDom4,560 chainNetGalGal3,566 chainNetGalVar1,577 chainNetHg19,563 chainNetMm10,562 chainNetMm39,563 chainNetMonDom4,563 chainNetOryCun2,563 chainNetRn6,566 chainOryCun2,560 chainRn6,563 ensGene,22 gc5Base,50 genscan,54 netGalGal3,563 netGalVar1,574 netHg19,560 netMm10,560 netMm39,560 netMonDom4,560 netOryCun2,560 netRn6,563 quality,66 refGene,75 refSeqComposite,99 refSeqComposite,134 refSeqComposite,874 rmsk,149 uniprot,634 xenoMrna,113 differing refSeqComposite,153 difficult transMapEnsemblV5,278 transMapEstV5,247 transMapRefSeqV5,247 transMapRnaV5,247 transMapV5,353 diffs ncbiRefSeqGenomicDiff,2 refSeqComposite,458 refSeqComposite,870 refSeqComposite,1200 refSeqComposite,1375 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 direction est,81 est,99 intronEst,162 intronEst,180 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 ensGene,111 uniprot,993 directory ensGene,86 ensGene,94 refSeqComposite,1531 refSeqComposite,1580 refSeqComposite,1600 rmsk,134 discarded chainGalGal3,694 chainGalVar1,709 chainHg19,691 chainMm10,691 chainMm39,691 chainMonDom4,691 chainNetGalGal3,697 chainNetGalVar1,712 chainNetHg19,694 chainNetMm10,693 chainNetMm39,694 chainNetMonDom4,694 chainNetOryCun2,694 chainNetRn6,697 chainOryCun2,691 chainRn6,694 netGalGal3,694 netGalVar1,709 netHg19,691 netMm10,691 netMm39,691 netMonDom4,691 netOryCun2,691 netRn6,694 refGene,277 refSeqComposite,1248 transMapEnsemblV5,383 transMapEstV5,352 transMapRefSeqV5,352 transMapRnaV5,352 transMapV5,458 xenoRefGene,238 discover blastHg18KG,57 nscanGene,167 discovery transMapEnsemblV5,738 transMapEstV5,707 transMapRefSeqV5,707 transMapRnaV5,707 transMapV5,813 discussion nestedRepeats,364 rmsk,387 disease uniprot,545 uniprot,616 diseases simpleRepeat,54 display HLTOGAannotvHg38v1,128 chainGalGal3,243 chainGalGal3,314 chainGalGal3,359 chainGalGal3,389 chainGalGal3,448 chainGalGal3,477 chainGalGal3,506 chainGalGal3,982 chainGalVar1,251 chainGalVar1,325 chainGalVar1,370 chainGalVar1,400 chainGalVar1,459 chainGalVar1,488 chainGalVar1,517 chainGalVar1,997 chainHg19,241 chainHg19,311 chainHg19,356 chainHg19,386 chainHg19,445 chainHg19,474 chainHg19,503 chainHg19,979 chainMm10,241 chainMm10,311 chainMm10,356 chainMm10,386 chainMm10,445 chainMm10,474 chainMm10,503 chainMm10,979 chainMm39,241 chainMm39,311 chainMm39,356 chainMm39,386 chainMm39,445 chainMm39,474 chainMm39,503 chainMm39,979 chainMonDom4,241 chainMonDom4,311 chainMonDom4,356 chainMonDom4,386 chainMonDom4,445 chainMonDom4,474 chainMonDom4,503 chainMonDom4,979 chainNetGalGal3,246 chainNetGalGal3,317 chainNetGalGal3,362 chainNetGalGal3,392 chainNetGalGal3,451 chainNetGalGal3,480 chainNetGalGal3,509 chainNetGalGal3,985 chainNetGalVar1,254 chainNetGalVar1,328 chainNetGalVar1,373 chainNetGalVar1,403 chainNetGalVar1,462 chainNetGalVar1,491 chainNetGalVar1,520 chainNetGalVar1,1000 chainNetHg19,244 chainNetHg19,314 chainNetHg19,359 chainNetHg19,389 chainNetHg19,448 chainNetHg19,477 chainNetHg19,506 chainNetHg19,982 chainNetMm10,243 chainNetMm10,313 chainNetMm10,358 chainNetMm10,388 chainNetMm10,447 chainNetMm10,476 chainNetMm10,505 chainNetMm10,981 chainNetMm39,244 chainNetMm39,314 chainNetMm39,359 chainNetMm39,389 chainNetMm39,448 chainNetMm39,477 chainNetMm39,506 chainNetMm39,982 chainNetMonDom4,244 chainNetMonDom4,314 chainNetMonDom4,359 chainNetMonDom4,389 chainNetMonDom4,448 chainNetMonDom4,477 chainNetMonDom4,506 chainNetMonDom4,982 chainNetOryCun2,244 chainNetOryCun2,314 chainNetOryCun2,359 chainNetOryCun2,389 chainNetOryCun2,448 chainNetOryCun2,477 chainNetOryCun2,506 chainNetOryCun2,982 chainNetRn6,246 chainNetRn6,317 chainNetRn6,362 chainNetRn6,392 chainNetRn6,451 chainNetRn6,480 chainNetRn6,509 chainNetRn6,985 chainOryCun2,241 chainOryCun2,311 chainOryCun2,356 chainOryCun2,386 chainOryCun2,445 chainOryCun2,474 chainOryCun2,503 chainOryCun2,979 chainRn6,243 chainRn6,314 chainRn6,359 chainRn6,389 chainRn6,448 chainRn6,477 chainRn6,506 chainRn6,982 est,46 est,54 est,62 est,127 est,154 est,184 est,329 est,353 est,369 est,385 est,395 est,444 genscan,61 genscan,69 genscan,104 gold,121 intronEst,118 intronEst,130 intronEst,138 intronEst,146 intronEst,208 intronEst,235 intronEst,265 intronEst,410 intronEst,434 intronEst,450 intronEst,466 intronEst,476 intronEst,525 mrna,27 mrna,35 mrna,43 mrna,73 mrna,100 mrna,130 mrna,275 mrna,299 mrna,315 mrna,331 mrna,383 nestedRepeats,111 netGalGal3,243 netGalGal3,314 netGalGal3,359 netGalGal3,389 netGalGal3,448 netGalGal3,477 netGalGal3,506 netGalGal3,982 netGalVar1,251 netGalVar1,325 netGalVar1,370 netGalVar1,400 netGalVar1,459 netGalVar1,488 netGalVar1,517 netGalVar1,997 netHg19,241 netHg19,311 netHg19,356 netHg19,386 netHg19,445 netHg19,474 netHg19,503 netHg19,979 netMm10,241 netMm10,311 netMm10,356 netMm10,386 netMm10,445 netMm10,474 netMm10,503 netMm10,979 netMm39,241 netMm39,311 netMm39,356 netMm39,386 netMm39,445 netMm39,474 netMm39,503 netMm39,979 netMonDom4,241 netMonDom4,311 netMonDom4,356 netMonDom4,386 netMonDom4,445 netMonDom4,474 netMonDom4,503 netMonDom4,979 netOryCun2,241 netOryCun2,311 netOryCun2,356 netOryCun2,386 netOryCun2,445 netOryCun2,474 netOryCun2,503 netOryCun2,979 netRn6,243 netRn6,314 netRn6,359 netRn6,389 netRn6,448 netRn6,477 netRn6,506 netRn6,982 quality,103 refGene,82 refGene,90 refGene,119 refGene,155 refGene,198 refSeqComposite,141 refSeqComposite,452 refSeqComposite,600 refSeqComposite,721 refSeqComposite,779 refSeqComposite,835 refSeqComposite,1183 refSeqComposite,1447 rmsk,135 rmsk,141 rmsk,212 transMapEnsemblV5,92 transMapEnsemblV5,100 transMapEnsemblV5,113 transMapEstV5,61 transMapEstV5,69 transMapEstV5,82 transMapRefSeqV5,61 transMapRefSeqV5,69 transMapRefSeqV5,82 transMapRnaV5,61 transMapRnaV5,69 transMapRnaV5,82 transMapV5,167 transMapV5,175 transMapV5,188 uniprot,446 xenoMrna,31 xenoMrna,39 xenoMrna,47 xenoMrna,147 xenoMrna,174 xenoMrna,204 xenoMrna,349 xenoMrna,373 xenoMrna,389 xenoMrna,405 xenoMrna,457 xenoRefGene,43 xenoRefGene,51 xenoRefGene,80 xenoRefGene,116 xenoRefGene,159 displayed chainGalGal3,425 chainGalGal3,522 chainGalGal3,699 chainGalVar1,436 chainGalVar1,533 chainGalVar1,714 chainHg19,422 chainHg19,519 chainHg19,696 chainMm10,422 chainMm10,519 chainMm10,696 chainMm39,422 chainMm39,519 chainMm39,696 chainMonDom4,422 chainMonDom4,519 chainMonDom4,696 chainNetGalGal3,428 chainNetGalGal3,525 chainNetGalGal3,702 chainNetGalVar1,439 chainNetGalVar1,536 chainNetGalVar1,717 chainNetHg19,425 chainNetHg19,522 chainNetHg19,699 chainNetMm10,424 chainNetMm10,521 chainNetMm10,698 chainNetMm39,425 chainNetMm39,522 chainNetMm39,699 chainNetMonDom4,425 chainNetMonDom4,522 chainNetMonDom4,699 chainNetOryCun2,425 chainNetOryCun2,522 chainNetOryCun2,699 chainNetRn6,428 chainNetRn6,525 chainNetRn6,702 chainOryCun2,422 chainOryCun2,519 chainOryCun2,696 chainRn6,425 chainRn6,522 chainRn6,699 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5Base,54 intronEst,805 nestedRepeats,124 nestedRepeats,217 netGalGal3,425 netGalGal3,522 netGalGal3,699 netGalVar1,436 netGalVar1,533 netGalVar1,714 netHg19,422 netHg19,519 netHg19,696 netMm10,422 netMm10,519 netMm10,696 netMm39,422 netMm39,519 netMm39,696 netMonDom4,422 netMonDom4,519 netMonDom4,696 netOryCun2,422 netOryCun2,519 netOryCun2,696 netRn6,425 netRn6,522 netRn6,699 quality,70 refGene,243 refSeqComposite,1119 xenoRefGene,204 displays chainGalGal3,124 chainGalVar1,130 chainHg19,122 chainMm10,122 chainMm39,122 chainMonDom4,122 chainNetGalGal3,127 chainNetGalVar1,133 chainNetHg19,125 chainNetMm10,124 chainNetMm39,125 chainNetMonDom4,125 chainNetOryCun2,125 chainNetRn6,127 chainOryCun2,122 chainRn6,124 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netGalGal3,124 netGalVar1,130 netHg19,122 netMm10,122 netMm39,122 netMonDom4,122 netOryCun2,122 netRn6,124 rmsk,145 simpleRepeat,14 tRNAs,16 xenoMrna,14 dissertation augustusGene,105 distance transMapEnsemblV5,221 transMapEstV5,190 transMapRefSeqV5,190 transMapRnaV5,190 transMapV5,296 distances transMapEnsemblV5,70 transMapEstV5,39 transMapRefSeqV5,39 transMapRnaV5,39 transMapV5,38 distant est,585 intronEst,666 transMapEnsemblV5,270 transMapEstV5,239 transMapRefSeqV5,239 transMapRnaV5,239 transMapV5,64 transMapV5,345 distinguish HLTOGAannotvHg38v1,92 cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,75 distributions augustusGene,83 genscan,42 disulf unipDisulfBond,1 uniprot,472 disulfide unipDisulfBond,4 uniprot,333 uniprot,335 diverged chainGalGal3,917 chainGalVar1,932 chainHg19,914 chainMm10,914 chainMm39,914 chainMonDom4,914 chainNetGalGal3,920 chainNetGalVar1,935 chainNetHg19,917 chainNetMm10,916 chainNetMm39,917 chainNetMonDom4,917 chainNetOryCun2,917 chainNetRn6,920 chainOryCun2,914 chainRn6,917 nestedRepeats,212 netGalGal3,917 netGalVar1,932 netHg19,914 netMm10,914 netMm39,914 netMonDom4,914 netOryCun2,914 netRn6,917 transMapV5,152 divided uniprot,56 dj blastHg18KG,164 est,756 est,780 intronEst,840 intronEst,864 mrna,473 mrna,497 xenoMrna,547 xenoMrna,571 dl est,784 intronEst,868 mrna,501 xenoMrna,575 dna chainGalGal3,1026 chainGalVar1,1041 chainHg19,1023 chainMm10,1023 chainMm39,1023 chainMonDom4,1023 chainNetGalGal3,1029 chainNetGalVar1,1044 chainNetHg19,1026 chainNetMm10,1025 chainNetMm39,1026 chainNetMonDom4,1026 chainNetOryCun2,1026 chainNetRn6,1029 chainOryCun2,1023 chainRn6,1026 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 genscan,219 microsat,123 nestedRepeats,33 nestedRepeats,41 netGalGal3,1026 netGalVar1,1041 netHg19,1023 netMm10,1023 netMm39,1023 netMonDom4,1023 netOryCun2,1023 netRn6,1026 refSeqComposite,1085 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 tRNAs,427 tRNAs,488 xenoMrna,110 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 refSeqComposite,390 tRNAs,152 tRNAs,305 transMapEnsemblV5,319 transMapEstV5,288 transMapRefSeqV5,288 transMapRnaV5,288 transMapV5,394 uniprot,168 uniprot,1129 doc rmsk,132 does tRNAs,113 tRNAs,135 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domain unipLocExtra,4 domains unipDomain,1 unipDomain,3 unipLocCytopl,4 unipLocTransMemb,4 uniprot,255 uniprot,257 uniprot,266 uniprot,268 uniprot,277 uniprot,279 uniprot,323 uniprot,325 uniprot,331 uniprot,391 uniprot,514 uniprot,516 uniprot,519 uniprot,550 done augustusGene,265 augustusGene,281 donor genscan,31 double chainGalGal3,132 chainGalGal3,162 chainGalVar1,138 chainGalVar1,170 chainHg19,130 chainHg19,160 chainMm10,130 chainMm10,160 chainMm39,130 chainMm39,160 chainMonDom4,130 chainMonDom4,160 chainNetGalGal3,135 chainNetGalGal3,165 chainNetGalVar1,141 chainNetGalVar1,173 chainNetHg19,133 chainNetHg19,163 chainNetMm10,132 chainNetMm10,162 chainNetMm39,133 chainNetMm39,163 chainNetMonDom4,133 chainNetMonDom4,163 chainNetOryCun2,133 chainNetOryCun2,163 chainNetRn6,135 chainNetRn6,165 chainOryCun2,130 chainOryCun2,160 chainRn6,132 chainRn6,162 netGalGal3,132 netGalGal3,162 netGalVar1,138 netGalVar1,170 netHg19,130 netHg19,160 netMm10,130 netMm10,160 netMm39,130 netMm39,160 netMonDom4,130 netMonDom4,160 netOryCun2,130 netOryCun2,160 netRn6,132 netRn6,162 refSeqComposite,1020 double-lined chainGalGal3,223 chainGalVar1,231 chainHg19,221 chainMm10,221 chainMm39,221 chainMonDom4,221 chainNetGalGal3,226 chainNetGalVar1,234 chainNetHg19,224 chainNetMm10,223 chainNetMm39,224 chainNetMonDom4,224 chainNetOryCun2,224 chainNetRn6,226 chainOryCun2,221 chainRn6,223 netGalGal3,223 netGalVar1,231 netHg19,221 netMm10,221 netMm39,221 netMonDom4,221 netOryCun2,221 netRn6,223 double-sided chainGalGal3,106 chainGalVar1,112 chainHg19,104 chainMm10,104 chainMm39,104 chainMonDom4,104 chainNetGalGal3,109 chainNetGalVar1,115 chainNetHg19,107 chainNetMm10,106 chainNetMm39,107 chainNetMonDom4,107 chainNetOryCun2,107 chainNetRn6,109 chainOryCun2,104 chainRn6,106 netGalGal3,106 netGalVar1,112 netHg19,104 netMm10,104 netMm39,104 netMonDom4,104 netOryCun2,104 netRn6,106 down ensGene,186 download ensGene,93 ensGene,143 refSeqComposite,1566 refSeqComposite,1709 transMapEnsemblV5,560 transMapEstV5,529 transMapRefSeqV5,529 transMapRnaV5,529 transMapV5,635 uniprot,1744 uniprot,1983 downloaded refSeqComposite,1166 refSeqComposite,1331 refSeqComposite,1520 transMapEnsemblV5,557 transMapEnsemblV5,626 transMapEstV5,526 transMapEstV5,595 transMapRefSeqV5,526 transMapRefSeqV5,595 transMapRnaV5,526 transMapRnaV5,595 transMapV5,632 transMapV5,701 ucscToRefSeq,30 uniprot,1741 uniprot,1777 downloading transMapEnsemblV5,636 transMapEstV5,605 transMapRefSeqV5,605 transMapRnaV5,605 transMapV5,711 uniprot,1787 downloads ensGene,74 ensGene,85 refSeqComposite,1334 refSeqComposite,1350 refSeqComposite,1489 refSeqComposite,1579 refSeqComposite,1604 refSeqComposite,1683 rmsk,76 uniprot,1698 downstream refSeqComposite,1458 dr refGene,407 refSeqComposite,1797 xenoRefGene,367 draft gold,13 drastically intronEst,105 drawn gap,75 gold,117 draws uniprot,1532 drosophila augustusGene,213 duan nscanGene,341 due HLTOGAannotvHg38v1,207 chainGalGal3,146 chainGalGal3,216 chainGalGal3,228 chainGalVar1,152 chainGalVar1,224 chainGalVar1,236 chainHg19,144 chainHg19,214 chainHg19,226 chainMm10,144 chainMm10,214 chainMm10,226 chainMm39,144 chainMm39,214 chainMm39,226 chainMonDom4,144 chainMonDom4,214 chainMonDom4,226 chainNetGalGal3,149 chainNetGalGal3,219 chainNetGalGal3,231 chainNetGalVar1,155 chainNetGalVar1,227 chainNetGalVar1,239 chainNetHg19,147 chainNetHg19,217 chainNetHg19,229 chainNetMm10,146 chainNetMm10,216 chainNetMm10,228 chainNetMm39,147 chainNetMm39,217 chainNetMm39,229 chainNetMonDom4,147 chainNetMonDom4,217 chainNetMonDom4,229 chainNetOryCun2,147 chainNetOryCun2,217 chainNetOryCun2,229 chainNetRn6,149 chainNetRn6,219 chainNetRn6,231 chainOryCun2,144 chainOryCun2,214 chainOryCun2,226 chainRn6,146 chainRn6,216 chainRn6,228 netGalGal3,146 netGalGal3,216 netGalGal3,228 netGalVar1,152 netGalVar1,224 netGalVar1,236 netHg19,144 netHg19,214 netHg19,226 netMm10,144 netMm10,214 netMm10,226 netMm39,144 netMm39,214 netMm39,226 netMonDom4,144 netMonDom4,214 netMonDom4,226 netOryCun2,144 netOryCun2,214 netOryCun2,226 netRn6,146 netRn6,216 netRn6,228 refSeqComposite,979 uniprot,848 uniprot,919 uniprot,1368 duplicate uniprot,594 duplication chainGalGal3,1064 chainGalVar1,1079 chainHg19,1061 chainMm10,1061 chainMm39,1061 chainMonDom4,1061 chainNetGalGal3,1067 chainNetGalVar1,1082 chainNetHg19,1064 chainNetMm10,1063 chainNetMm39,1064 chainNetMonDom4,1064 chainNetOryCun2,1064 chainNetRn6,1067 chainOryCun2,1061 chainRn6,1064 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netGalGal3,1064 netGalVar1,1079 netHg19,1061 netMm10,1061 netMm39,1061 netMonDom4,1061 netOryCun2,1061 netRn6,1064 duplications transMapEnsemblV5,312 transMapEnsemblV5,510 transMapEstV5,281 transMapEstV5,479 transMapRefSeqV5,281 transMapRefSeqV5,479 transMapRnaV5,281 transMapRnaV5,479 transMapV5,387 transMapV5,585 durbin tRNAs,396 during chainGalGal3,822 chainGalVar1,837 chainHg19,819 chainMm10,819 chainMm39,819 chainMonDom4,819 chainNetGalGal3,825 chainNetGalVar1,840 chainNetHg19,822 chainNetMm10,821 chainNetMm39,822 chainNetMonDom4,822 chainNetOryCun2,822 chainNetRn6,825 chainOryCun2,819 chainRn6,822 gap,31 gap,137 netGalGal3,822 netGalVar1,837 netHg19,819 netMm10,819 netMm39,819 netMonDom4,819 netOryCun2,819 netRn6,822 dynamic chainGalGal3,655 chainGalVar1,670 chainHg19,652 chainMm10,652 chainMm39,652 chainMonDom4,652 chainNetGalGal3,658 chainNetGalVar1,673 chainNetHg19,655 chainNetMm10,654 chainNetMm39,655 chainNetMonDom4,655 chainNetOryCun2,655 chainNetRn6,658 chainOryCun2,652 chainRn6,655 netGalGal3,655 netGalVar1,670 netHg19,652 netMm10,652 netMm39,652 netMonDom4,652 netOryCun2,652 netRn6,655 e HLTOGAannotvHg38v1,339 ensGene,173 tRNAs,352 uniprot,2021 e.g chainGalGal3,376 chainGalVar1,387 chainHg19,373 chainMm10,373 chainMm39,373 chainMonDom4,373 chainNetGalGal3,379 chainNetGalVar1,390 chainNetHg19,376 chainNetMm10,375 chainNetMm39,376 chainNetMonDom4,376 chainNetOryCun2,376 chainNetRn6,379 chainOryCun2,373 chainRn6,376 netGalGal3,376 netGalVar1,387 netHg19,373 netMm10,373 netMm39,373 netMonDom4,373 netOryCun2,373 netRn6,376 refSeqComposite,1136 uniprot,398 uniprot,467 e247 transMapEnsemblV5,818 transMapEstV5,787 transMapRefSeqV5,787 transMapRnaV5,787 transMapV5,893 eabn3107 HLTOGAannotvHg38v1,370 each HLTOGAannotvHg38v1,132 blastHg18KG,68 chainGalGal3,261 chainGalVar1,269 chainHg19,259 chainMm10,259 chainMm39,259 chainMonDom4,259 chainNetGalGal3,264 chainNetGalVar1,272 chainNetHg19,262 chainNetMm10,261 chainNetMm39,262 chainNetMonDom4,262 chainNetOryCun2,262 chainNetRn6,264 chainOryCun2,259 chainRn6,261 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 est,217 genscan,99 intronEst,298 mrna,163 nestedRepeats,120 netGalGal3,261 netGalVar1,269 netHg19,259 netMm10,259 netMm39,259 netMonDom4,259 netOryCun2,259 netRn6,261 quality,22 quality,30 refSeqComposite,542 refSeqComposite,1430 transMapEnsemblV5,389 transMapEnsemblV5,403 transMapEnsemblV5,412 transMapEnsemblV5,431 transMapEstV5,358 transMapEstV5,372 transMapEstV5,381 transMapEstV5,400 transMapRefSeqV5,358 transMapRefSeqV5,372 transMapRefSeqV5,381 transMapRefSeqV5,400 transMapRnaV5,358 transMapRnaV5,372 transMapRnaV5,381 transMapRnaV5,400 transMapV5,464 transMapV5,478 transMapV5,487 transMapV5,506 uniprot,151 xenoMrna,237 echo uniprot,1925 eddy tRNAs,65 tRNAs,394 tRNAs,442 edge uniprot,1182 uniprot,1451 editors genscan,195 educated tRNAs,255 effect est,600 intronEst,681 either chainGalGal3,129 chainGalVar1,135 chainHg19,127 chainMm10,127 chainMm39,127 chainMonDom4,127 chainNetGalGal3,132 chainNetGalVar1,138 chainNetHg19,130 chainNetMm10,129 chainNetMm39,130 chainNetMonDom4,130 chainNetOryCun2,130 chainNetRn6,132 chainOryCun2,127 chainRn6,129 gap,54 netGalGal3,129 netGalVar1,135 netHg19,127 netMm10,127 netMm39,127 netMonDom4,127 netOryCun2,127 netRn6,129 rmsk,273 uniprot,816 uniprot,1398 electronic nestedRepeats,348 rmsk,371 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 tRNAs,302 eliminate est,673 intronEst,754 eliminating intronEst,111 elsevier genscan,202 em windowmaskerSdust,93 emerged chainGalGal3,828 chainGalVar1,843 chainHg19,825 chainMm10,825 chainMm39,825 chainMonDom4,825 chainNetGalGal3,831 chainNetGalVar1,846 chainNetHg19,828 chainNetMm10,827 chainNetMm39,828 chainNetMonDom4,828 chainNetOryCun2,828 chainNetRn6,831 chainOryCun2,825 chainRn6,828 est,570 intronEst,651 netGalGal3,828 netGalVar1,843 netHg19,825 netMm10,825 netMm39,825 netMonDom4,825 netOryCun2,825 netRn6,828 encode HLTOGAannotvHg38v1,161 HLTOGAannotvHg38v1,191 HLTOGAannotvHg38v1,267 HLTOGAannotvHg38v1,290 tRNAs,171 encodes tRNAs,143 end est,520 est,538 est,548 est,589 intronEst,601 intronEst,619 intronEst,629 intronEst,670 refSeqComposite,1054 refSeqComposite,1561 rmsk,245 transMapEnsemblV5,673 transMapEstV5,642 transMapRefSeqV5,642 transMapRnaV5,642 transMapV5,748 uniprot,126 uniprot,210 uniprot,1823 ends intronEst,92 enough HLTOGAannotvHg38v1,254 nscanGene,179 refSeqComposite,1028 ensembl ensGene,1 ensGene,3 ensGene,16 ensGene,38 ensGene,57 ensGene,151 ensGene,162 ensGene,191 transMapEnsemblV5,2 transMapEnsemblV5,4 transMapEnsemblV5,20 transMapEnsemblV5,40 transMapEnsemblV5,47 transMapEnsemblV5,58 transMapEnsemblV5,592 transMapEnsemblV5,708 transMapEstV5,561 transMapEstV5,677 transMapRefSeqV5,561 transMapRefSeqV5,677 transMapRnaV5,561 transMapRnaV5,677 transMapV5,667 transMapV5,783 uniprot,731 uniprot,834 uniprot,865 ensgene.txt.gz ensGene,88 ensure transMapEnsemblV5,385 transMapEstV5,354 transMapRefSeqV5,354 transMapRnaV5,354 transMapV5,460 enter chainGalGal3,370 chainGalVar1,381 chainHg19,367 chainMm10,367 chainMm39,367 chainMonDom4,367 chainNetGalGal3,373 chainNetGalVar1,384 chainNetHg19,370 chainNetMm10,369 chainNetMm39,370 chainNetMonDom4,370 chainNetOryCun2,370 chainNetRn6,373 chainOryCun2,367 chainRn6,370 netGalGal3,370 netGalVar1,381 netHg19,367 netMm10,367 netMm39,367 netMonDom4,367 netOryCun2,367 netRn6,370 entered est,254 est,264 intronEst,335 intronEst,345 mrna,200 mrna,210 xenoMrna,274 xenoMrna,284 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 windowmaskerSdust,37 entirely uniprot,1434 entries refSeqComposite,1359 ermolaeva refGene,370 refSeqComposite,1760 xenoRefGene,330 errors refSeqComposite,953 especially est,155 intronEst,236 mrna,101 xenoMrna,175 est est,11 est,87 est,183 est,451 est,614 est,635 est,687 est,733 intronEst,12 intronEst,62 intronEst,77 intronEst,102 intronEst,128 intronEst,168 intronEst,264 intronEst,532 intronEst,695 intronEst,716 intronEst,768 intronEst,817 mrna,11 nscanGene,38 nscanGene,115 nscanGene,117 nscanGene,135 nscanGene,149 nscanGene,191 refSeqComposite,264 refSeqComposite,364 transMapEnsemblV5,689 transMapEstV5,4 transMapEstV5,18 transMapEstV5,658 transMapRefSeqV5,658 transMapRnaV5,658 transMapV5,764 xenoMrna,10 established refSeqComposite,688 ests est,3 est,6 est,23 est,29 est,193 est,298 est,313 est,354 est,372 est,490 est,535 est,546 est,648 est,675 intronEst,2 intronEst,5 intronEst,24 intronEst,40 intronEst,115 intronEst,121 intronEst,156 intronEst,274 intronEst,379 intronEst,394 intronEst,435 intronEst,453 intronEst,571 intronEst,616 intronEst,627 intronEst,729 intronEst,756 nscanGene,173 nscanGene,182 transMapEnsemblV5,177 transMapEnsemblV5,601 transMapEstV5,2 transMapEstV5,146 transMapEstV5,570 transMapRefSeqV5,146 transMapRefSeqV5,570 transMapRnaV5,146 transMapRnaV5,570 transMapV5,252 transMapV5,676 estseq nscanGene,186 nscanGene,200 et HLTOGAannotvHg38v1,354 cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 ensGene,45 ensGene,188 nscanGene,312 refGene,380 refSeqComposite,1770 transMapEnsemblV5,735 transMapEstV5,704 transMapRefSeqV5,704 transMapRnaV5,704 transMapV5,810 xenoRefGene,340 etc uniprot,479 eukaryotes tRNAs,101 eukaryotic tRNAs,483 evaluate uniprot,1461 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 even est,609 est,616 intronEst,690 intronEst,697 uniprot,136 every chainGalGal3,277 chainGalVar1,287 chainHg19,275 chainMm10,275 chainMm39,275 chainMonDom4,275 chainNetGalGal3,280 chainNetGalVar1,290 chainNetHg19,278 chainNetMm10,277 chainNetMm39,278 chainNetMonDom4,278 chainNetOryCun2,278 chainNetRn6,280 chainOryCun2,275 chainRn6,277 netGalGal3,277 netGalVar1,287 netHg19,275 netMm10,275 netMm39,275 netMonDom4,275 netOryCun2,275 netRn6,277 refSeqComposite,478 uniprot,1571 evidence HLTOGAannotvHg38v1,196 HLTOGAannotvHg38v1,250 HLTOGAannotvHg38v1,283 gold,56 intronEst,65 refSeqComposite,261 refSeqComposite,276 evolution chainGalGal3,1061 chainGalVar1,1076 chainHg19,1058 chainMm10,1058 chainMm39,1058 chainMonDom4,1058 chainNetGalGal3,1064 chainNetGalVar1,1079 chainNetHg19,1061 chainNetMm10,1060 chainNetMm39,1061 chainNetMonDom4,1061 chainNetOryCun2,1061 chainNetRn6,1064 chainOryCun2,1058 chainRn6,1061 netGalGal3,1061 netGalVar1,1076 netHg19,1058 netMm10,1058 netMm39,1058 netMonDom4,1058 netOryCun2,1058 netRn6,1061 nscanGene,84 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 transMapEnsemblV5,69 transMapEstV5,38 transMapRefSeqV5,38 transMapRnaV5,38 transMapV5,37 ew blastHg18KG,162 est,760 intronEst,844 mrna,477 xenoMrna,551 ewing transMapEnsemblV5,729 transMapEstV5,698 transMapRefSeqV5,698 transMapRnaV5,698 transMapV5,804 exact tRNAs,264 uniprot,1622 uniprot,1747 example est,186 est,239 intronEst,267 intronEst,320 mrna,132 mrna,185 refSeqComposite,1535 rmsk,256 transMapEnsemblV5,448 transMapEnsemblV5,660 transMapEstV5,417 transMapEstV5,629 transMapRefSeqV5,417 transMapRefSeqV5,629 transMapRnaV5,417 transMapRnaV5,629 transMapV5,97 transMapV5,523 transMapV5,735 uniprot,1450 uniprot,1811 uniprot,1901 xenoMrna,206 xenoMrna,259 examples refSeqComposite,406 except refSeqComposite,41 uniprot,508 exception gap,22 exclude est,134 est,339 est,345 intronEst,215 intronEst,420 intronEst,426 mrna,80 mrna,285 mrna,291 xenoMrna,154 xenoMrna,359 xenoMrna,365 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 uniprot,1918 exhibits HLTOGAannotvHg38v1,154 HLTOGAannotvHg38v1,183 HLTOGAannotvHg38v1,230 exist chainGalGal3,409 chainGalVar1,420 chainHg19,406 chainMm10,406 chainMm39,406 chainMonDom4,406 chainNetGalGal3,412 chainNetGalVar1,423 chainNetHg19,409 chainNetMm10,408 chainNetMm39,409 chainNetMonDom4,409 chainNetOryCun2,409 chainNetRn6,412 chainOryCun2,406 chainRn6,409 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,87 netGalGal3,409 netGalVar1,420 netHg19,406 netMm10,406 netMm39,406 netMonDom4,406 netOryCun2,406 netRn6,409 refSeqComposite,293 exists refSeqComposite,330 exon HLTOGAannotvHg38v1,312 augustusGene,86 blastHg18KG,58 blastHg18KG,69 blastHg18KG,103 blastHg18KG,116 exons HLTOGAannotvHg38v1,114 blastHg18KG,86 chainGalGal3,49 chainGalVar1,52 chainHg19,48 chainMm10,48 chainMm39,48 chainMonDom4,48 chainNetGalGal3,52 chainNetGalVar1,55 chainNetHg19,51 chainNetMm10,50 chainNetMm39,51 chainNetMonDom4,51 chainNetOryCun2,51 chainNetRn6,52 chainOryCun2,48 chainRn6,49 genscan,44 netGalGal3,49 netGalVar1,52 netHg19,48 netMm10,48 netMm39,48 netMonDom4,48 netOryCun2,48 netRn6,49 nscanGene,141 transMapEnsemblV5,742 transMapEstV5,711 transMapRefSeqV5,711 transMapRnaV5,711 transMapV5,817 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expanded refSeqComposite,665 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense intronEst,109 transMapEnsemblV5,297 transMapEstV5,266 transMapRefSeqV5,266 transMapRnaV5,266 transMapV5,372 experimentally uniprot,304 explanation gc5Base,66 quality,80 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 ensGene,62 refSeqComposite,1307 uniprot,1716 expressed est,20 est,194 intronEst,21 intronEst,275 mrna,140 xenoMrna,214 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extended blastHg18KG,119 extending blastHg18KG,105 extends nscanGene,62 extra transMapEnsemblV5,552 transMapEstV5,521 transMapRefSeqV5,521 transMapRnaV5,521 transMapV5,627 extracellular unipLocExtra,1 unipLocExtra,3 uniprot,254 uniprot,262 uniprot,513 uniprot,566 extract refSeqComposite,1537 extracted nestedRepeats,23 f chainGalGal3,1034 chainGalVar1,1049 chainHg19,1031 chainMm10,1031 chainMm39,1031 chainMonDom4,1031 chainNetGalGal3,1037 chainNetGalVar1,1052 chainNetHg19,1034 chainNetMm10,1033 chainNetMm39,1034 chainNetMonDom4,1034 chainNetOryCun2,1034 chainNetRn6,1037 chainOryCun2,1031 chainRn6,1034 netGalGal3,1034 netGalVar1,1049 netHg19,1031 netMm10,1031 netMm39,1031 netMonDom4,1031 netOryCun2,1031 netRn6,1034 nscanGene,263 refGene,367 refSeqComposite,1757 tRNAs,473 xenoRefGene,327 facilitate genscan,106 uniprot,1852 factor est,231 intronEst,312 mrna,177 xenoMrna,251 false tRNAs,87 famiglietti uniprot,2018 families uniprot,1395 family rmsk,249 faq augustusGene,45 ensGene,28 genscan,60 nestedRepeats,298 refGene,81 refSeqComposite,140 rmsk,321 transMapEnsemblV5,579 transMapEstV5,548 transMapRefSeqV5,548 transMapRnaV5,548 transMapV5,654 uniprot,1839 far uniprot,599 farrell refGene,372 refSeqComposite,1762 xenoRefGene,332 fasta refSeqComposite,1663 feature chainGalGal3,247 chainGalVar1,255 chainHg19,245 chainMm10,245 chainMm39,245 chainMonDom4,245 chainNetGalGal3,250 chainNetGalVar1,258 chainNetHg19,248 chainNetMm10,247 chainNetMm39,248 chainNetMonDom4,248 chainNetOryCun2,248 chainNetRn6,250 chainOryCun2,245 chainRn6,247 est,389 genscan,129 intronEst,470 mrna,335 netGalGal3,247 netGalVar1,255 netHg19,245 netMm10,245 netMm39,245 netMonDom4,245 netOryCun2,245 netRn6,247 refGene,186 refGene,219 refSeqComposite,823 refSeqComposite,856 transMapEnsemblV5,117 transMapEstV5,86 transMapRefSeqV5,86 transMapRnaV5,86 transMapV5,192 uniprot,64 uniprot,524 uniprot,613 xenoMrna,409 xenoRefGene,147 xenoRefGene,180 features refGene,122 refSeqComposite,724 tRNAs,185 tRNAs,218 tRNAs,238 tRNAs,276 transMapEnsemblV5,654 transMapEstV5,623 transMapRefSeqV5,623 transMapRnaV5,623 transMapV5,729 uniprot,694 uniprot,1805 xenoRefGene,83 feb chainHg19,4 chainHg19,66 chainHg19,306 chainNetHg19,5 chainNetHg19,69 chainNetHg19,309 chainNetHg19Viewchain,3 chainNetHg19Viewnet,3 netHg19,4 netHg19,66 netHg19,306 fed chainGalGal3,620 chainGalVar1,633 chainHg19,617 chainMm10,617 chainMm39,617 chainMonDom4,617 chainNetGalGal3,623 chainNetGalVar1,636 chainNetHg19,620 chainNetMm10,619 chainNetMm39,620 chainNetMonDom4,620 chainNetOryCun2,620 chainNetRn6,623 chainOryCun2,617 chainRn6,620 netGalGal3,620 netGalVar1,633 netHg19,617 netMm10,617 netMm39,617 netMonDom4,617 netOryCun2,617 netRn6,620 feedback refGene,48 refSeqComposite,107 uniprot,1445 uniprot,1961 fewer tRNAs,91 transMapV5,160 ffer windowmaskerSdust,96 fichant tRNAs,32 tRNAs,417 field augustusGene,120 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 refSeqComposite,1171 refSeqComposite,1381 refSeqComposite,1392 refSeqComposite,1657 uniprot,884 uniprot,1511 uniprot,1614 uniprot,1737 uniprot,1756 windowmaskerSdust,77 filenames uniprot,1748 uniprot,1894 files ensGene,78 refSeqComposite,1164 refSeqComposite,1482 transMapEnsemblV5,547 transMapEnsemblV5,581 transMapEstV5,516 transMapEstV5,550 transMapRefSeqV5,516 transMapRefSeqV5,550 transMapRnaV5,516 transMapRnaV5,550 transMapV5,622 transMapV5,656 uniprot,1863 fill chainGalGal3,852 chainGalGal3,885 chainGalVar1,867 chainGalVar1,900 chainHg19,849 chainHg19,882 chainMm10,849 chainMm10,882 chainMm39,849 chainMm39,882 chainMonDom4,849 chainMonDom4,882 chainNetGalGal3,855 chainNetGalGal3,888 chainNetGalVar1,870 chainNetGalVar1,903 chainNetHg19,852 chainNetHg19,885 chainNetMm10,851 chainNetMm10,884 chainNetMm39,852 chainNetMm39,885 chainNetMonDom4,852 chainNetMonDom4,885 chainNetOryCun2,852 chainNetOryCun2,885 chainNetRn6,855 chainNetRn6,888 chainOryCun2,849 chainOryCun2,882 chainRn6,852 chainRn6,885 netGalGal3,852 netGalGal3,885 netGalVar1,867 netGalVar1,900 netHg19,849 netHg19,882 netMm10,849 netMm10,882 netMm39,849 netMm39,882 netMonDom4,849 netMonDom4,882 netOryCun2,849 netOryCun2,882 netRn6,852 netRn6,885 filled chainGalGal3,418 chainGalGal3,437 chainGalGal3,834 chainGalGal3,907 chainGalVar1,429 chainGalVar1,448 chainGalVar1,849 chainGalVar1,922 chainHg19,415 chainHg19,434 chainHg19,831 chainHg19,904 chainMm10,415 chainMm10,434 chainMm10,831 chainMm10,904 chainMm39,415 chainMm39,434 chainMm39,831 chainMm39,904 chainMonDom4,415 chainMonDom4,434 chainMonDom4,831 chainMonDom4,904 chainNetGalGal3,421 chainNetGalGal3,440 chainNetGalGal3,837 chainNetGalGal3,910 chainNetGalVar1,432 chainNetGalVar1,451 chainNetGalVar1,852 chainNetGalVar1,925 chainNetHg19,418 chainNetHg19,437 chainNetHg19,834 chainNetHg19,907 chainNetMm10,417 chainNetMm10,436 chainNetMm10,833 chainNetMm10,906 chainNetMm39,418 chainNetMm39,437 chainNetMm39,834 chainNetMm39,907 chainNetMonDom4,418 chainNetMonDom4,437 chainNetMonDom4,834 chainNetMonDom4,907 chainNetOryCun2,418 chainNetOryCun2,437 chainNetOryCun2,834 chainNetOryCun2,907 chainNetRn6,421 chainNetRn6,440 chainNetRn6,837 chainNetRn6,910 chainOryCun2,415 chainOryCun2,434 chainOryCun2,831 chainOryCun2,904 chainRn6,418 chainRn6,437 chainRn6,834 chainRn6,907 netGalGal3,418 netGalGal3,437 netGalGal3,834 netGalGal3,907 netGalVar1,429 netGalVar1,448 netGalVar1,849 netGalVar1,922 netHg19,415 netHg19,434 netHg19,831 netHg19,904 netMm10,415 netMm10,434 netMm10,831 netMm10,904 netMm39,415 netMm39,434 netMm39,831 netMm39,904 netMonDom4,415 netMonDom4,434 netMonDom4,831 netMonDom4,904 netOryCun2,415 netOryCun2,434 netOryCun2,831 netOryCun2,904 netRn6,418 netRn6,437 netRn6,834 netRn6,907 filter chainGalGal3,382 chainGalVar1,393 chainHg19,379 chainMm10,379 chainMm39,379 chainMonDom4,379 chainNetGalGal3,385 chainNetGalVar1,396 chainNetHg19,382 chainNetMm10,381 chainNetMm39,382 chainNetMonDom4,382 chainNetOryCun2,382 chainNetRn6,385 chainOryCun2,379 chainRn6,382 est,119 est,168 est,181 est,190 est,237 est,278 est,302 est,320 est,358 est,376 genscan,82 intronEst,200 intronEst,249 intronEst,262 intronEst,271 intronEst,318 intronEst,359 intronEst,383 intronEst,401 intronEst,439 intronEst,457 mrna,65 mrna,114 mrna,127 mrna,136 mrna,183 mrna,224 mrna,248 mrna,266 mrna,304 mrna,322 netGalGal3,382 netGalVar1,393 netHg19,379 netMm10,379 netMm39,379 netMonDom4,379 netOryCun2,379 netRn6,382 uniprot,187 uniprot,664 xenoMrna,139 xenoMrna,188 xenoMrna,201 xenoMrna,210 xenoMrna,257 xenoMrna,298 xenoMrna,322 xenoMrna,340 xenoMrna,378 xenoMrna,396 filtered est,341 intronEst,422 mrna,287 transMapEnsemblV5,77 transMapEnsemblV5,352 transMapEstV5,46 transMapEstV5,321 transMapRefSeqV5,46 transMapRefSeqV5,321 transMapRnaV5,46 transMapRnaV5,321 transMapV5,45 transMapV5,427 uniprot,1480 uniprot,1499 xenoMrna,361 filtering est,280 intronEst,361 mrna,226 transMapEnsemblV5,238 transMapEnsemblV5,306 transMapEstV5,207 transMapEstV5,275 transMapRefSeqV5,207 transMapRefSeqV5,275 transMapRnaV5,207 transMapRnaV5,275 transMapV5,313 transMapV5,381 uniprot,693 uniprot,912 uniprot,1154 xenoMrna,300 filters tRNAs,55 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 uniprot,1153 finally blastHg18KG,81 find chainGalGal3,664 chainGalVar1,679 chainHg19,661 chainMm10,661 chainMm39,661 chainMonDom4,661 chainNetGalGal3,667 chainNetGalVar1,682 chainNetHg19,664 chainNetMm10,663 chainNetMm39,664 chainNetMonDom4,664 chainNetOryCun2,664 chainNetRn6,667 chainOryCun2,661 chainRn6,664 netGalGal3,664 netGalVar1,679 netHg19,661 netMm10,661 netMm39,661 netMonDom4,661 netOryCun2,661 netRn6,664 rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainGalGal3,288 chainGalVar1,298 chainHg19,286 chainMm10,286 chainMm39,286 chainMonDom4,286 chainNetGalGal3,291 chainNetGalVar1,301 chainNetHg19,289 chainNetMm10,288 chainNetMm39,289 chainNetMonDom4,289 chainNetOryCun2,289 chainNetRn6,291 chainOryCun2,286 chainRn6,288 netGalGal3,288 netGalVar1,298 netHg19,286 netMm10,286 netMm39,286 netMonDom4,286 netOryCun2,286 netRn6,288 transMapEnsemblV5,777 transMapEstV5,746 transMapRefSeqV5,746 transMapRnaV5,746 transMapV5,852 finds transMapV5,159 finger uniprot,327 finished transMapEnsemblV5,363 transMapEstV5,332 transMapRefSeqV5,332 transMapRnaV5,332 transMapV5,438 finishing gap,33 first blastHg18KG,36 chainGalGal3,792 chainGalVar1,807 chainHg19,789 chainMm10,789 chainMm39,789 chainMonDom4,789 chainNetGalGal3,795 chainNetGalVar1,810 chainNetHg19,792 chainNetMm10,791 chainNetMm39,792 chainNetMonDom4,792 chainNetOryCun2,792 chainNetRn6,795 chainOryCun2,789 chainRn6,792 netGalGal3,792 netGalVar1,807 netHg19,789 netMm10,789 netMm39,789 netMonDom4,789 netOryCun2,789 netRn6,792 refSeqComposite,1427 uniprot,70 xenoMrna,72 fish augustusGene,201 fit chainGalGal3,812 chainGalVar1,827 chainHg19,809 chainMm10,809 chainMm39,809 chainMonDom4,809 chainNetGalGal3,815 chainNetGalVar1,830 chainNetHg19,812 chainNetMm10,811 chainNetMm39,812 chainNetMonDom4,812 chainNetOryCun2,812 chainNetRn6,815 chainOryCun2,809 chainRn6,812 nestedRepeats,175 netGalGal3,812 netGalVar1,827 netHg19,809 netMm10,809 netMm39,809 netMonDom4,809 netOryCun2,809 netRn6,812 refSeqComposite,392 five refSeqComposite,873 refSeqComposite,889 fix uniprot,851 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 flicek nscanGene,339 fly augustusGene,214 flying chainGalVar1,2 chainGalVar1,6 chainGalVar1,70 chainGalVar1,104 chainGalVar1,159 chainGalVar1,281 chainGalVar1,310 chainGalVar1,593 chainGalVar1,644 chainNetGalVar1,2 chainNetGalVar1,7 chainNetGalVar1,73 chainNetGalVar1,107 chainNetGalVar1,162 chainNetGalVar1,284 chainNetGalVar1,313 chainNetGalVar1,596 chainNetGalVar1,647 chainNetGalVar1Viewchain,3 chainNetGalVar1Viewnet,3 netGalVar1,2 netGalVar1,6 netGalVar1,70 netGalVar1,104 netGalVar1,159 netGalVar1,281 netGalVar1,310 netGalVar1,593 netGalVar1,644 fold tRNAs,308 follow refSeqComposite,598 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainGalGal3,673 chainGalVar1,688 chainHg19,670 chainMm10,670 chainMm39,670 chainMonDom4,670 chainNetGalGal3,676 chainNetGalVar1,691 chainNetHg19,673 chainNetMm10,672 chainNetMm39,673 chainNetMonDom4,673 chainNetOryCun2,673 chainNetRn6,676 chainOryCun2,670 chainRn6,673 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,87 genscan,81 netGalGal3,673 netGalVar1,688 netHg19,670 netMm10,670 netMm39,670 netMonDom4,670 netOryCun2,670 netRn6,673 refSeqComposite,450 refSeqComposite,1548 tRNAs,364 transMapEnsemblV5,589 transMapEstV5,558 transMapRefSeqV5,558 transMapRnaV5,558 transMapV5,664 windowmaskerSdust,56 follows est,52 genscan,67 intronEst,136 mrna,33 refGene,88 refSeqComposite,895 refSeqComposite,1406 transMapEnsemblV5,98 transMapEnsemblV5,216 transMapEstV5,67 transMapEstV5,185 transMapRefSeqV5,67 transMapRefSeqV5,185 transMapRnaV5,67 transMapRnaV5,185 transMapV5,173 transMapV5,291 xenoMrna,37 xenoRefGene,49 for HLTOGAannotvHg38v1,55 HLTOGAannotvHg38v1,59 augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 blastHg18KG,149 chainGalGal3,260 chainGalGal3,276 chainGalGal3,287 chainGalGal3,294 chainGalGal3,495 chainGalVar1,268 chainGalVar1,286 chainGalVar1,297 chainGalVar1,304 chainGalVar1,506 chainHg19,258 chainHg19,274 chainHg19,285 chainHg19,292 chainHg19,492 chainMm10,258 chainMm10,274 chainMm10,285 chainMm10,292 chainMm10,492 chainMm39,258 chainMm39,274 chainMm39,285 chainMm39,292 chainMm39,492 chainMonDom4,258 chainMonDom4,274 chainMonDom4,285 chainMonDom4,292 chainMonDom4,492 chainNetGalGal3,263 chainNetGalGal3,279 chainNetGalGal3,290 chainNetGalGal3,297 chainNetGalGal3,498 chainNetGalVar1,271 chainNetGalVar1,289 chainNetGalVar1,300 chainNetGalVar1,307 chainNetGalVar1,509 chainNetHg19,261 chainNetHg19,277 chainNetHg19,288 chainNetHg19,295 chainNetHg19,495 chainNetMm10,260 chainNetMm10,276 chainNetMm10,287 chainNetMm10,294 chainNetMm10,494 chainNetMm39,261 chainNetMm39,277 chainNetMm39,288 chainNetMm39,295 chainNetMm39,495 chainNetMonDom4,261 chainNetMonDom4,277 chainNetMonDom4,288 chainNetMonDom4,295 chainNetMonDom4,495 chainNetOryCun2,261 chainNetOryCun2,277 chainNetOryCun2,288 chainNetOryCun2,295 chainNetOryCun2,495 chainNetRn6,263 chainNetRn6,279 chainNetRn6,290 chainNetRn6,297 chainNetRn6,498 chainOryCun2,258 chainOryCun2,274 chainOryCun2,285 chainOryCun2,292 chainOryCun2,492 chainRn6,260 chainRn6,276 chainRn6,287 chainRn6,294 chainRn6,495 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 ensGene,17 ensGene,30 ensGene,72 ensGene,79 ensGene,98 ensGene,152 ensGene,157 est,56 est,114 est,185 est,216 est,238 est,411 est,422 est,435 est,483 gc5Base,64 genscan,49 genscan,71 genscan,124 genscan,131 genscan,174 intronEst,116 intronEst,140 intronEst,195 intronEst,266 intronEst,297 intronEst,319 intronEst,492 intronEst,503 intronEst,516 intronEst,564 microsat,95 mrna,37 mrna,60 mrna,131 mrna,162 mrna,184 mrna,348 mrna,361 mrna,374 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netGalGal3,260 netGalGal3,276 netGalGal3,287 netGalGal3,294 netGalGal3,495 netGalVar1,268 netGalVar1,286 netGalVar1,297 netGalVar1,304 netGalVar1,506 netHg19,258 netHg19,274 netHg19,285 netHg19,292 netHg19,492 netMm10,258 netMm10,274 netMm10,285 netMm10,292 netMm10,492 netMm39,258 netMm39,274 netMm39,285 netMm39,292 netMm39,492 netMonDom4,258 netMonDom4,274 netMonDom4,285 netMonDom4,292 netMonDom4,492 netOryCun2,258 netOryCun2,274 netOryCun2,285 netOryCun2,292 netOryCun2,492 netRn6,260 netRn6,276 netRn6,287 netRn6,294 netRn6,495 nscanGene,70 nscanGene,101 nscanGene,134 nscanGene,239 nscanGene,245 quality,78 refGene,49 refGene,65 refGene,70 refGene,92 refGene,214 refSeqComposite,42 refSeqComposite,74 refSeqComposite,93 refSeqComposite,108 refSeqComposite,124 refSeqComposite,129 refSeqComposite,236 refSeqComposite,245 refSeqComposite,331 refSeqComposite,395 refSeqComposite,454 refSeqComposite,477 refSeqComposite,541 refSeqComposite,602 refSeqComposite,723 refSeqComposite,747 refSeqComposite,851 refSeqComposite,1182 refSeqComposite,1295 refSeqComposite,1336 refSeqComposite,1446 refSeqComposite,1525 refSeqComposite,1534 refSeqComposite,1665 refSeqComposite,1693 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 tRNAs,100 tRNAs,230 tRNAs,447 transMapEnsemblV5,41 transMapEnsemblV5,45 transMapEnsemblV5,67 transMapEnsemblV5,102 transMapEnsemblV5,130 transMapEnsemblV5,147 transMapEnsemblV5,190 transMapEnsemblV5,217 transMapEnsemblV5,235 transMapEnsemblV5,266 transMapEnsemblV5,268 transMapEnsemblV5,286 transMapEnsemblV5,290 transMapEnsemblV5,388 transMapEnsemblV5,402 transMapEnsemblV5,411 transMapEnsemblV5,447 transMapEnsemblV5,523 transMapEnsemblV5,538 transMapEnsemblV5,567 transMapEnsemblV5,631 transMapEnsemblV5,635 transMapEnsemblV5,659 transMapEnsemblV5,802 transMapEstV5,36 transMapEstV5,71 transMapEstV5,99 transMapEstV5,116 transMapEstV5,159 transMapEstV5,186 transMapEstV5,204 transMapEstV5,235 transMapEstV5,237 transMapEstV5,255 transMapEstV5,259 transMapEstV5,357 transMapEstV5,371 transMapEstV5,380 transMapEstV5,416 transMapEstV5,492 transMapEstV5,507 transMapEstV5,536 transMapEstV5,600 transMapEstV5,604 transMapEstV5,628 transMapEstV5,771 transMapRefSeqV5,36 transMapRefSeqV5,71 transMapRefSeqV5,99 transMapRefSeqV5,116 transMapRefSeqV5,159 transMapRefSeqV5,186 transMapRefSeqV5,204 transMapRefSeqV5,235 transMapRefSeqV5,237 transMapRefSeqV5,255 transMapRefSeqV5,259 transMapRefSeqV5,357 transMapRefSeqV5,371 transMapRefSeqV5,380 transMapRefSeqV5,416 transMapRefSeqV5,492 transMapRefSeqV5,507 transMapRefSeqV5,536 transMapRefSeqV5,600 transMapRefSeqV5,604 transMapRefSeqV5,628 transMapRefSeqV5,771 transMapRnaV5,36 transMapRnaV5,71 transMapRnaV5,99 transMapRnaV5,116 transMapRnaV5,159 transMapRnaV5,186 transMapRnaV5,204 transMapRnaV5,235 transMapRnaV5,237 transMapRnaV5,255 transMapRnaV5,259 transMapRnaV5,357 transMapRnaV5,371 transMapRnaV5,380 transMapRnaV5,416 transMapRnaV5,492 transMapRnaV5,507 transMapRnaV5,536 transMapRnaV5,600 transMapRnaV5,604 transMapRnaV5,628 transMapRnaV5,771 transMapV5,35 transMapV5,62 transMapV5,96 transMapV5,98 transMapV5,151 transMapV5,177 transMapV5,205 transMapV5,222 transMapV5,265 transMapV5,292 transMapV5,310 transMapV5,341 transMapV5,343 transMapV5,361 transMapV5,365 transMapV5,463 transMapV5,477 transMapV5,486 transMapV5,522 transMapV5,598 transMapV5,613 transMapV5,642 transMapV5,706 transMapV5,710 transMapV5,734 transMapV5,877 ucscToRefSeq,39 uniprot,75 uniprot,78 uniprot,401 uniprot,405 uniprot,462 uniprot,497 uniprot,532 uniprot,549 uniprot,697 uniprot,739 uniprot,743 uniprot,770 uniprot,842 uniprot,846 uniprot,861 uniprot,886 uniprot,964 uniprot,997 uniprot,1017 uniprot,1023 uniprot,1057 uniprot,1070 uniprot,1097 uniprot,1119 uniprot,1211 uniprot,1238 uniprot,1320 uniprot,1393 uniprot,1427 uniprot,1627 uniprot,1644 uniprot,1651 uniprot,1661 uniprot,1726 uniprot,1782 uniprot,1786 uniprot,1810 uniprot,1833 uniprot,1840 uniprot,1869 uniprot,1977 uniprot,1982 uniprot,2034 windowmaskerSdust,35 windowmaskerSdust,86 windowmaskerSdust,103 xenoMrna,41 xenoMrna,64 xenoMrna,134 xenoMrna,205 xenoMrna,236 xenoMrna,258 xenoMrna,422 xenoMrna,435 xenoMrna,448 xenoRefGene,20 xenoRefGene,53 xenoRefGene,175 form uniprot,1665 format chainGalGal3,611 chainGalVar1,624 chainHg19,608 chainMm10,608 chainMm39,608 chainMonDom4,608 chainNetGalGal3,614 chainNetGalVar1,627 chainNetHg19,611 chainNetMm10,610 chainNetMm39,611 chainNetMonDom4,611 chainNetOryCun2,611 chainNetRn6,614 chainOryCun2,608 chainRn6,611 ensGene,77 ensGene,97 netGalGal3,611 netGalVar1,624 netHg19,608 netMm10,608 netMm39,608 netMonDom4,608 netOryCun2,608 netRn6,611 refSeqComposite,1172 refSeqComposite,1362 refSeqComposite,1382 refSeqComposite,1408 refSeqComposite,1422 refSeqComposite,1569 refSeqComposite,1583 refSeqComposite,1591 refSeqComposite,1664 transMapEnsemblV5,420 transMapEstV5,389 transMapRefSeqV5,389 transMapRnaV5,389 transMapV5,495 formats refSeqComposite,1181 uniprot,885 uniprot,1865 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainGalGal3,444 chainGalVar1,455 chainHg19,441 chainMm10,441 chainMm39,441 chainMonDom4,441 chainNetGalGal3,447 chainNetGalVar1,458 chainNetHg19,444 chainNetMm10,443 chainNetMm39,444 chainNetMonDom4,444 chainNetOryCun2,444 chainNetRn6,447 chainOryCun2,441 chainRn6,444 netGalGal3,444 netGalVar1,455 netHg19,441 netMm10,441 netMm39,441 netMonDom4,441 netOryCun2,441 netRn6,444 found augustusGene,100 ensGene,139 mrna,416 refSeqComposite,1196 refSeqComposite,1395 refSeqComposite,1680 refSeqComposite,1705 transMapEnsemblV5,643 transMapEstV5,612 transMapRefSeqV5,612 transMapRnaV5,612 transMapV5,718 uniprot,241 uniprot,1128 uniprot,1271 uniprot,1328 uniprot,1557 uniprot,1751 uniprot,1794 xenoMrna,489 four chainGalGal3,512 chainGalVar1,523 chainHg19,509 chainMm10,509 chainMm39,509 chainMonDom4,509 chainNetGalGal3,515 chainNetGalVar1,526 chainNetHg19,512 chainNetMm10,511 chainNetMm39,512 chainNetMonDom4,512 chainNetOryCun2,512 chainNetRn6,515 chainOryCun2,509 chainRn6,512 netGalGal3,512 netGalVar1,523 netHg19,509 netMm10,509 netMm39,509 netMonDom4,509 netOryCun2,509 netRn6,512 xenoMrna,119 fragment gap,92 gap,146 gold,133 fragments est,42 gold,4 intronEst,53 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 free uniprot,1435 from HLTOGAannotvHg38v1,21 HLTOGAannotvHg38v1,94 HLTOGAannotvHg38v1,330 augustusGene,19 blastHg18KG,22 blastHg18KG,40 chainGalGal3,178 chainGalGal3,306 chainGalGal3,564 chainGalGal3,587 chainGalGal3,769 chainGalGal3,942 chainGalGal3,974 chainGalVar1,186 chainGalVar1,318 chainGalVar1,575 chainGalVar1,600 chainGalVar1,784 chainGalVar1,957 chainGalVar1,989 chainHg19,176 chainHg19,304 chainHg19,561 chainHg19,584 chainHg19,766 chainHg19,939 chainHg19,971 chainMm10,176 chainMm10,304 chainMm10,561 chainMm10,584 chainMm10,766 chainMm10,939 chainMm10,971 chainMm39,176 chainMm39,304 chainMm39,561 chainMm39,584 chainMm39,766 chainMm39,939 chainMm39,971 chainMonDom4,176 chainMonDom4,304 chainMonDom4,561 chainMonDom4,584 chainMonDom4,766 chainMonDom4,939 chainMonDom4,971 chainNetGalGal3,181 chainNetGalGal3,309 chainNetGalGal3,567 chainNetGalGal3,590 chainNetGalGal3,772 chainNetGalGal3,945 chainNetGalGal3,977 chainNetGalVar1,189 chainNetGalVar1,321 chainNetGalVar1,578 chainNetGalVar1,603 chainNetGalVar1,787 chainNetGalVar1,960 chainNetGalVar1,992 chainNetHg19,179 chainNetHg19,307 chainNetHg19,564 chainNetHg19,587 chainNetHg19,769 chainNetHg19,942 chainNetHg19,974 chainNetMm10,178 chainNetMm10,306 chainNetMm10,563 chainNetMm10,586 chainNetMm10,768 chainNetMm10,941 chainNetMm10,973 chainNetMm39,179 chainNetMm39,307 chainNetMm39,564 chainNetMm39,587 chainNetMm39,769 chainNetMm39,942 chainNetMm39,974 chainNetMonDom4,179 chainNetMonDom4,307 chainNetMonDom4,564 chainNetMonDom4,587 chainNetMonDom4,769 chainNetMonDom4,942 chainNetMonDom4,974 chainNetOryCun2,179 chainNetOryCun2,307 chainNetOryCun2,564 chainNetOryCun2,587 chainNetOryCun2,769 chainNetOryCun2,942 chainNetOryCun2,974 chainNetRn6,181 chainNetRn6,309 chainNetRn6,567 chainNetRn6,590 chainNetRn6,772 chainNetRn6,945 chainNetRn6,977 chainOryCun2,176 chainOryCun2,304 chainOryCun2,561 chainOryCun2,584 chainOryCun2,766 chainOryCun2,939 chainOryCun2,971 chainRn6,178 chainRn6,306 chainRn6,564 chainRn6,587 chainRn6,769 chainRn6,942 chainRn6,974 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ensGene,106 ensGene,112 est,407 est,455 est,476 est,586 est,604 est,649 est,732 gap,152 genscan,15 gold,3 intronEst,488 intronEst,536 intronEst,557 intronEst,667 intronEst,685 intronEst,730 intronEst,816 mrna,7 mrna,449 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netGalGal3,178 netGalGal3,306 netGalGal3,564 netGalGal3,587 netGalGal3,769 netGalGal3,942 netGalGal3,974 netGalVar1,186 netGalVar1,318 netGalVar1,575 netGalVar1,600 netGalVar1,784 netGalVar1,957 netGalVar1,989 netHg19,176 netHg19,304 netHg19,561 netHg19,584 netHg19,766 netHg19,939 netHg19,971 netMm10,176 netMm10,304 netMm10,561 netMm10,584 netMm10,766 netMm10,939 netMm10,971 netMm39,176 netMm39,304 netMm39,561 netMm39,584 netMm39,766 netMm39,939 netMm39,971 netMonDom4,176 netMonDom4,304 netMonDom4,561 netMonDom4,584 netMonDom4,766 netMonDom4,939 netMonDom4,971 netOryCun2,176 netOryCun2,304 netOryCun2,561 netOryCun2,584 netOryCun2,766 netOryCun2,939 netOryCun2,971 netRn6,178 netRn6,306 netRn6,564 netRn6,587 netRn6,769 netRn6,942 netRn6,974 nscanGene,51 refGene,29 refGene,206 refGene,326 refSeqComposite,5 refSeqComposite,26 refSeqComposite,289 refSeqComposite,295 refSeqComposite,423 refSeqComposite,485 refSeqComposite,843 refSeqComposite,1103 refSeqComposite,1158 refSeqComposite,1167 refSeqComposite,1332 refSeqComposite,1487 refSeqComposite,1515 refSeqComposite,1528 refSeqComposite,1576 refSeqComposite,1597 refSeqComposite,1611 refSeqComposite,1718 rmsk,86 tRNAs,130 transMapEnsemblV5,29 transMapEnsemblV5,158 transMapEnsemblV5,558 transMapEnsemblV5,621 transMapEnsemblV5,686 transMapEstV5,27 transMapEstV5,127 transMapEstV5,527 transMapEstV5,590 transMapEstV5,655 transMapRefSeqV5,27 transMapRefSeqV5,127 transMapRefSeqV5,527 transMapRefSeqV5,590 transMapRefSeqV5,655 transMapRnaV5,27 transMapRnaV5,127 transMapRnaV5,527 transMapRnaV5,590 transMapRnaV5,655 transMapV5,26 transMapV5,112 transMapV5,233 transMapV5,633 transMapV5,696 transMapV5,761 ucscToRefSeq,20 ucscToRefSeq,31 uniprot,21 uniprot,36 uniprot,115 uniprot,198 uniprot,250 uniprot,557 uniprot,747 uniprot,831 uniprot,890 uniprot,915 uniprot,1507 uniprot,1696 uniprot,1742 uniprot,1772 uniprot,1844 uniprot,1953 uniprot,1962 windowmaskerSdust,41 xenoMrna,6 xenoMrna,25 xenoMrna,523 xenoRefGene,27 xenoRefGene,167 xenoRefGene,287 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 ftp windowmaskerSdust,44 full chainGalGal3,241 chainGalGal3,388 chainGalVar1,249 chainGalVar1,399 chainHg19,239 chainHg19,385 chainMm10,239 chainMm10,385 chainMm39,239 chainMm39,385 chainMonDom4,239 chainMonDom4,385 chainNetGalGal3,244 chainNetGalGal3,391 chainNetGalVar1,252 chainNetGalVar1,402 chainNetHg19,242 chainNetHg19,388 chainNetMm10,241 chainNetMm10,387 chainNetMm39,242 chainNetMm39,388 chainNetMonDom4,242 chainNetMonDom4,388 chainNetOryCun2,242 chainNetOryCun2,388 chainNetRn6,244 chainNetRn6,391 chainOryCun2,239 chainOryCun2,385 chainRn6,241 chainRn6,388 nestedRepeats,118 netGalGal3,241 netGalGal3,388 netGalVar1,249 netGalVar1,399 netHg19,239 netHg19,385 netMm10,239 netMm10,385 netMm39,239 netMm39,385 netMonDom4,239 netMonDom4,385 netOryCun2,239 netOryCun2,385 netRn6,241 netRn6,388 rmsk,140 transMapEnsemblV5,52 transMapEnsemblV5,280 transMapEstV5,249 transMapRefSeqV5,249 transMapRnaV5,249 transMapV5,355 uniprot,486 uniprot,528 uniprot,540 full-length refSeqComposite,266 function tRNAs,154 functional HLTOGAannotvHg38v1,162 HLTOGAannotvHg38v1,192 HLTOGAannotvHg38v1,269 HLTOGAannotvHg38v1,292 tRNAs,145 tRNAs,172 tRNAs,221 furthermore augustusGene,64 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 ensGene,175 gc5Base,20 microsat,115 refSeqComposite,904 refSeqComposite,956 refSeqComposite,1080 simpleRepeat,75 tRNAs,477 g-25-100100-90 chainGalGal3,681 chainMonDom4,678 chainNetGalGal3,684 chainNetMonDom4,681 netGalGal3,681 netMonDom4,678 g-31-125100-114 chainGalVar1,696 chainHg19,678 chainMm10,678 chainMm39,678 chainNetGalVar1,699 chainNetHg19,681 chainNetMm10,680 chainNetMm39,681 chainNetOryCun2,681 chainNetRn6,684 chainOryCun2,678 chainRn6,681 netGalVar1,696 netHg19,678 netMm10,678 netMm39,678 netOryCun2,678 netRn6,681 g_variegatus-3.0.2 chainGalVar1,10 chainGalVar1,74 chainGalVar1,322 chainNetGalVar1,11 chainNetGalVar1,77 chainNetGalVar1,325 chainNetGalVar1Viewchain,7 chainNetGalVar1Viewnet,7 netGalVar1,10 netGalVar1,74 netGalVar1,322 ga tRNAs,418 galgal3 chainGalGal3,8 chainGalGal3,71 chainGalGal3,312 chainNetGalGal3,9 chainNetGalGal3,74 chainNetGalGal3,315 chainNetGalGal3Viewchain,7 chainNetGalGal3Viewnet,7 netGalGal3,8 netGalGal3,71 netGalGal3,312 galgal6 HLTOGAannotvHg38v1,58 galvar1 chainGalVar1,11 chainGalVar1,75 chainGalVar1,323 chainNetGalVar1,12 chainNetGalVar1,78 chainNetGalVar1,326 chainNetGalVar1Viewchain,8 chainNetGalVar1Viewnet,8 netGalVar1,11 netGalVar1,75 netGalVar1,323 gambiae augustusGene,219 gap blastHg18KG,94 blastHg18KG,98 chainGalGal3,79 chainGalGal3,89 chainGalGal3,190 chainGalGal3,481 chainGalGal3,493 chainGalGal3,516 chainGalGal3,534 chainGalGal3,549 chainGalGal3,566 chainGalGal3,705 chainGalGal3,836 chainGalVar1,83 chainGalVar1,93 chainGalVar1,198 chainGalVar1,492 chainGalVar1,504 chainGalVar1,527 chainGalVar1,545 chainGalVar1,560 chainGalVar1,577 chainGalVar1,720 chainGalVar1,851 chainHg19,77 chainHg19,87 chainHg19,188 chainHg19,478 chainHg19,490 chainHg19,513 chainHg19,531 chainHg19,546 chainHg19,563 chainHg19,702 chainHg19,833 chainMm10,77 chainMm10,87 chainMm10,188 chainMm10,478 chainMm10,490 chainMm10,513 chainMm10,531 chainMm10,546 chainMm10,563 chainMm10,702 chainMm10,833 chainMm39,77 chainMm39,87 chainMm39,188 chainMm39,478 chainMm39,490 chainMm39,513 chainMm39,531 chainMm39,546 chainMm39,563 chainMm39,702 chainMm39,833 chainMonDom4,77 chainMonDom4,87 chainMonDom4,188 chainMonDom4,478 chainMonDom4,490 chainMonDom4,513 chainMonDom4,531 chainMonDom4,546 chainMonDom4,563 chainMonDom4,702 chainMonDom4,833 chainNetGalGal3,82 chainNetGalGal3,92 chainNetGalGal3,193 chainNetGalGal3,484 chainNetGalGal3,496 chainNetGalGal3,519 chainNetGalGal3,537 chainNetGalGal3,552 chainNetGalGal3,569 chainNetGalGal3,708 chainNetGalGal3,839 chainNetGalVar1,86 chainNetGalVar1,96 chainNetGalVar1,201 chainNetGalVar1,495 chainNetGalVar1,507 chainNetGalVar1,530 chainNetGalVar1,548 chainNetGalVar1,563 chainNetGalVar1,580 chainNetGalVar1,723 chainNetGalVar1,854 chainNetHg19,80 chainNetHg19,90 chainNetHg19,191 chainNetHg19,481 chainNetHg19,493 chainNetHg19,516 chainNetHg19,534 chainNetHg19,549 chainNetHg19,566 chainNetHg19,705 chainNetHg19,836 chainNetMm10,79 chainNetMm10,89 chainNetMm10,190 chainNetMm10,480 chainNetMm10,492 chainNetMm10,515 chainNetMm10,533 chainNetMm10,548 chainNetMm10,565 chainNetMm10,704 chainNetMm10,835 chainNetMm39,80 chainNetMm39,90 chainNetMm39,191 chainNetMm39,481 chainNetMm39,493 chainNetMm39,516 chainNetMm39,534 chainNetMm39,549 chainNetMm39,566 chainNetMm39,705 chainNetMm39,836 chainNetMonDom4,80 chainNetMonDom4,90 chainNetMonDom4,191 chainNetMonDom4,481 chainNetMonDom4,493 chainNetMonDom4,516 chainNetMonDom4,534 chainNetMonDom4,549 chainNetMonDom4,566 chainNetMonDom4,705 chainNetMonDom4,836 chainNetOryCun2,80 chainNetOryCun2,90 chainNetOryCun2,191 chainNetOryCun2,481 chainNetOryCun2,493 chainNetOryCun2,516 chainNetOryCun2,534 chainNetOryCun2,549 chainNetOryCun2,566 chainNetOryCun2,705 chainNetOryCun2,836 chainNetRn6,82 chainNetRn6,92 chainNetRn6,193 chainNetRn6,484 chainNetRn6,496 chainNetRn6,519 chainNetRn6,537 chainNetRn6,552 chainNetRn6,569 chainNetRn6,708 chainNetRn6,839 chainOryCun2,77 chainOryCun2,87 chainOryCun2,188 chainOryCun2,478 chainOryCun2,490 chainOryCun2,513 chainOryCun2,531 chainOryCun2,546 chainOryCun2,563 chainOryCun2,702 chainOryCun2,833 chainRn6,79 chainRn6,89 chainRn6,190 chainRn6,481 chainRn6,493 chainRn6,516 chainRn6,534 chainRn6,549 chainRn6,566 chainRn6,705 chainRn6,836 est,430 gap,1 gap,2 gap,58 gap,69 gap,82 gap,91 gap,147 gold,44 intronEst,511 mrna,369 netGalGal3,79 netGalGal3,89 netGalGal3,190 netGalGal3,481 netGalGal3,493 netGalGal3,516 netGalGal3,534 netGalGal3,549 netGalGal3,566 netGalGal3,705 netGalGal3,836 netGalVar1,83 netGalVar1,93 netGalVar1,198 netGalVar1,492 netGalVar1,504 netGalVar1,527 netGalVar1,545 netGalVar1,560 netGalVar1,577 netGalVar1,720 netGalVar1,851 netHg19,77 netHg19,87 netHg19,188 netHg19,478 netHg19,490 netHg19,513 netHg19,531 netHg19,546 netHg19,563 netHg19,702 netHg19,833 netMm10,77 netMm10,87 netMm10,188 netMm10,478 netMm10,490 netMm10,513 netMm10,531 netMm10,546 netMm10,563 netMm10,702 netMm10,833 netMm39,77 netMm39,87 netMm39,188 netMm39,478 netMm39,490 netMm39,513 netMm39,531 netMm39,546 netMm39,563 netMm39,702 netMm39,833 netMonDom4,77 netMonDom4,87 netMonDom4,188 netMonDom4,478 netMonDom4,490 netMonDom4,513 netMonDom4,531 netMonDom4,546 netMonDom4,563 netMonDom4,702 netMonDom4,833 netOryCun2,77 netOryCun2,87 netOryCun2,188 netOryCun2,478 netOryCun2,490 netOryCun2,513 netOryCun2,531 netOryCun2,546 netOryCun2,563 netOryCun2,702 netOryCun2,833 netRn6,79 netRn6,89 netRn6,190 netRn6,481 netRn6,493 netRn6,516 netRn6,534 netRn6,549 netRn6,566 netRn6,705 netRn6,836 refSeqComposite,930 refSeqComposite,963 refSeqComposite,1019 refSeqComposite,1021 transMapEnsemblV5,142 transMapEstV5,111 transMapRefSeqV5,111 transMapRnaV5,111 transMapV5,217 xenoMrna,443 gapless chainGalGal3,648 chainGalVar1,663 chainHg19,645 chainMm10,645 chainMm39,645 chainMonDom4,645 chainNetGalGal3,651 chainNetGalVar1,666 chainNetHg19,648 chainNetMm10,647 chainNetMm39,648 chainNetMonDom4,648 chainNetOryCun2,648 chainNetRn6,651 chainOryCun2,645 chainRn6,648 netGalGal3,648 netGalVar1,663 netHg19,645 netMm10,645 netMm39,645 netMonDom4,645 netOryCun2,645 netRn6,648 gaps HLTOGAannotvHg38v1,210 chainGalGal3,85 chainGalGal3,96 chainGalGal3,108 chainGalGal3,142 chainGalGal3,167 chainGalGal3,213 chainGalGal3,224 chainGalGal3,408 chainGalGal3,430 chainGalGal3,457 chainGalGal3,891 chainGalGal3,897 chainGalVar1,89 chainGalVar1,100 chainGalVar1,114 chainGalVar1,148 chainGalVar1,175 chainGalVar1,221 chainGalVar1,232 chainGalVar1,419 chainGalVar1,441 chainGalVar1,468 chainGalVar1,906 chainGalVar1,912 chainHg19,83 chainHg19,94 chainHg19,106 chainHg19,140 chainHg19,165 chainHg19,211 chainHg19,222 chainHg19,405 chainHg19,427 chainHg19,454 chainHg19,888 chainHg19,894 chainMm10,83 chainMm10,94 chainMm10,106 chainMm10,140 chainMm10,165 chainMm10,211 chainMm10,222 chainMm10,405 chainMm10,427 chainMm10,454 chainMm10,888 chainMm10,894 chainMm39,83 chainMm39,94 chainMm39,106 chainMm39,140 chainMm39,165 chainMm39,211 chainMm39,222 chainMm39,405 chainMm39,427 chainMm39,454 chainMm39,888 chainMm39,894 chainMonDom4,83 chainMonDom4,94 chainMonDom4,106 chainMonDom4,140 chainMonDom4,165 chainMonDom4,211 chainMonDom4,222 chainMonDom4,405 chainMonDom4,427 chainMonDom4,454 chainMonDom4,888 chainMonDom4,894 chainNetGalGal3,88 chainNetGalGal3,99 chainNetGalGal3,111 chainNetGalGal3,145 chainNetGalGal3,170 chainNetGalGal3,216 chainNetGalGal3,227 chainNetGalGal3,411 chainNetGalGal3,433 chainNetGalGal3,460 chainNetGalGal3,894 chainNetGalGal3,900 chainNetGalVar1,92 chainNetGalVar1,103 chainNetGalVar1,117 chainNetGalVar1,151 chainNetGalVar1,178 chainNetGalVar1,224 chainNetGalVar1,235 chainNetGalVar1,422 chainNetGalVar1,444 chainNetGalVar1,471 chainNetGalVar1,909 chainNetGalVar1,915 chainNetHg19,86 chainNetHg19,97 chainNetHg19,109 chainNetHg19,143 chainNetHg19,168 chainNetHg19,214 chainNetHg19,225 chainNetHg19,408 chainNetHg19,430 chainNetHg19,457 chainNetHg19,891 chainNetHg19,897 chainNetMm10,85 chainNetMm10,96 chainNetMm10,108 chainNetMm10,142 chainNetMm10,167 chainNetMm10,213 chainNetMm10,224 chainNetMm10,407 chainNetMm10,429 chainNetMm10,456 chainNetMm10,890 chainNetMm10,896 chainNetMm39,86 chainNetMm39,97 chainNetMm39,109 chainNetMm39,143 chainNetMm39,168 chainNetMm39,214 chainNetMm39,225 chainNetMm39,408 chainNetMm39,430 chainNetMm39,457 chainNetMm39,891 chainNetMm39,897 chainNetMonDom4,86 chainNetMonDom4,97 chainNetMonDom4,109 chainNetMonDom4,143 chainNetMonDom4,168 chainNetMonDom4,214 chainNetMonDom4,225 chainNetMonDom4,408 chainNetMonDom4,430 chainNetMonDom4,457 chainNetMonDom4,891 chainNetMonDom4,897 chainNetOryCun2,86 chainNetOryCun2,97 chainNetOryCun2,109 chainNetOryCun2,143 chainNetOryCun2,168 chainNetOryCun2,214 chainNetOryCun2,225 chainNetOryCun2,408 chainNetOryCun2,430 chainNetOryCun2,457 chainNetOryCun2,891 chainNetOryCun2,897 chainNetRn6,88 chainNetRn6,99 chainNetRn6,111 chainNetRn6,145 chainNetRn6,170 chainNetRn6,216 chainNetRn6,227 chainNetRn6,411 chainNetRn6,433 chainNetRn6,460 chainNetRn6,894 chainNetRn6,900 chainOryCun2,83 chainOryCun2,94 chainOryCun2,106 chainOryCun2,140 chainOryCun2,165 chainOryCun2,211 chainOryCun2,222 chainOryCun2,405 chainOryCun2,427 chainOryCun2,454 chainOryCun2,888 chainOryCun2,894 chainRn6,85 chainRn6,96 chainRn6,108 chainRn6,142 chainRn6,167 chainRn6,213 chainRn6,224 chainRn6,408 chainRn6,430 chainRn6,457 chainRn6,891 chainRn6,897 gap,11 gap,18 gap,26 gap,35 gap,93 gold,86 netGalGal3,85 netGalGal3,96 netGalGal3,108 netGalGal3,142 netGalGal3,167 netGalGal3,213 netGalGal3,224 netGalGal3,408 netGalGal3,430 netGalGal3,457 netGalGal3,891 netGalGal3,897 netGalVar1,89 netGalVar1,100 netGalVar1,114 netGalVar1,148 netGalVar1,175 netGalVar1,221 netGalVar1,232 netGalVar1,419 netGalVar1,441 netGalVar1,468 netGalVar1,906 netGalVar1,912 netHg19,83 netHg19,94 netHg19,106 netHg19,140 netHg19,165 netHg19,211 netHg19,222 netHg19,405 netHg19,427 netHg19,454 netHg19,888 netHg19,894 netMm10,83 netMm10,94 netMm10,106 netMm10,140 netMm10,165 netMm10,211 netMm10,222 netMm10,405 netMm10,427 netMm10,454 netMm10,888 netMm10,894 netMm39,83 netMm39,94 netMm39,106 netMm39,140 netMm39,165 netMm39,211 netMm39,222 netMm39,405 netMm39,427 netMm39,454 netMm39,888 netMm39,894 netMonDom4,83 netMonDom4,94 netMonDom4,106 netMonDom4,140 netMonDom4,165 netMonDom4,211 netMonDom4,222 netMonDom4,405 netMonDom4,427 netMonDom4,454 netMonDom4,888 netMonDom4,894 netOryCun2,83 netOryCun2,94 netOryCun2,106 netOryCun2,140 netOryCun2,165 netOryCun2,211 netOryCun2,222 netOryCun2,405 netOryCun2,427 netOryCun2,454 netOryCun2,888 netOryCun2,894 netRn6,85 netRn6,96 netRn6,108 netRn6,142 netRn6,167 netRn6,213 netRn6,224 netRn6,408 netRn6,430 netRn6,457 netRn6,891 netRn6,897 refSeqComposite,933 refSeqComposite,1024 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gasteiger uniprot,2020 gattiker uniprot,2016 gbdb refSeqComposite,1553 transMapEnsemblV5,664 transMapEstV5,633 transMapRefSeqV5,633 transMapRnaV5,633 transMapV5,739 uniprot,1815 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5Base,1 gc5Base,3 gc5Base,13 gc5Base,30 genbank est,25 est,650 est,761 est,785 intronEst,26 intronEst,731 intronEst,845 intronEst,869 mrna,8 mrna,23 mrna,387 mrna,478 mrna,502 transMapEnsemblV5,172 transMapEnsemblV5,175 transMapEstV5,16 transMapEstV5,141 transMapEstV5,144 transMapRefSeqV5,141 transMapRefSeqV5,144 transMapRnaV5,4 transMapRnaV5,17 transMapRnaV5,141 transMapRnaV5,144 transMapV5,247 transMapV5,250 uniprot,376 xenoMrna,7 xenoMrna,24 xenoMrna,552 xenoMrna,576 gencode transMapEnsemblV5,6 transMapEnsemblV5,18 transMapEnsemblV5,38 transMapEnsemblV5,710 transMapEstV5,679 transMapRefSeqV5,679 transMapRnaV5,679 transMapV5,785 uniprot,730 gene HLTOGAannotvHg38v1,13 HLTOGAannotvHg38v1,30 HLTOGAannotvHg38v1,47 HLTOGAannotvHg38v1,357 augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 blastHg18KG,11 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 ensGene,7 ensGene,11 ensGene,23 ensGene,39 ensGene,58 ensGene,155 genscan,4 genscan,8 genscan,55 genscan,72 genscan,111 genscan,117 genscan,214 ncbiRefSeq,17 ncbiRefSeqCurated,15 ncbiRefSeqGenomicDiff,14 ncbiRefSeqOther,17 ncbiRefSeqPredicted,13 ncbiRefSeqPsl,9 nscanGene,3 nscanGene,7 nscanGene,13 nscanGene,18 nscanGene,59 nscanGene,219 nscanGene,279 nscanGene,349 nscanGene,366 refGene,13 refGene,50 refGene,76 refGene,93 refGene,147 refGene,162 refGene,167 refGene,195 refGene,224 refSeqComposite,9 refSeqComposite,109 refSeqComposite,135 refSeqComposite,411 refSeqComposite,544 refSeqComposite,562 refSeqComposite,603 refSeqComposite,771 refSeqComposite,789 refSeqComposite,801 refSeqComposite,832 refSeqComposite,861 tRNAs,11 tRNAs,141 transMapEnsemblV5,12 transMapEnsemblV5,53 transMapEnsemblV5,59 transMapEnsemblV5,393 transMapEnsemblV5,776 transMapEstV5,10 transMapEstV5,362 transMapEstV5,745 transMapRefSeqV5,5 transMapRefSeqV5,11 transMapRefSeqV5,18 transMapRefSeqV5,362 transMapRefSeqV5,745 transMapRnaV5,11 transMapRnaV5,362 transMapRnaV5,745 transMapV5,9 transMapV5,17 transMapV5,468 transMapV5,851 unipAliSwissprot,20 unipAliTrembl,12 unipChain,10 unipConflict,8 unipDisulfBond,8 unipDomain,6 unipInterest,8 unipLocCytopl,7 unipLocExtra,7 unipLocSignal,8 unipLocTransMemb,7 unipModif,9 unipMut,8 unipOther,8 unipRepeat,6 unipStruct,10 uniprot,9 uniprot,732 uniprot,1025 uniprot,1050 uniprot,1059 uniprot,1080 uniprot,1281 uniprot,1394 xenoRefGene,9 xenoRefGene,54 xenoRefGene,108 xenoRefGene,123 xenoRefGene,128 xenoRefGene,156 xenoRefGene,185 gene-inactivating HLTOGAannotvHg38v1,156 gene-rich gc5Base,36 genedx uniprot,1973 genepred ensGene,76 refSeqComposite,1177 refSeqComposite,1407 refSeqComposite,1582 genepredtogtf refSeqComposite,1594 refSeqComposite,1617 refSeqComposite,1624 general est,532 intronEst,613 generally rmsk,72 uniprot,248 generate est,643 intronEst,724 nestedRepeats,261 nestedRepeats,320 nscanGene,56 nscanGene,199 nscanGene,215 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 ensGene,14 nestedRepeats,282 refGene,330 refSeqComposite,484 refSeqComposite,1203 refSeqComposite,1720 rmsk,289 xenoRefGene,291 generating augustusGene,189 genes HLTOGAannotvHg38v1,11 HLTOGAannotvHg38v1,36 HLTOGAannotvHg38v1,101 augustusGene,8 augustusGene,44 blastHg18KG,9 blastHg18KG,27 blastHg18KG,33 blastHg18KG,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 ensGene,2 ensGene,4 ensGene,5 ensGene,27 ensGene,92 est,45 genscan,2 genscan,6 genscan,59 intronEst,56 ncbiRefSeq,5 ncbiRefSeq,15 ncbiRefSeqCurated,5 ncbiRefSeqCurated,13 ncbiRefSeqGenomicDiff,12 ncbiRefSeqOther,15 ncbiRefSeqPredicted,5 ncbiRefSeqPredicted,11 ncbiRefSeqPsl,7 nscanGene,5 nscanGene,169 refGene,11 refGene,18 refGene,27 refGene,80 refGene,233 refGene,241 refGene,252 refSeqComposite,4 refSeqComposite,7 refSeqComposite,15 refSeqComposite,24 refSeqComposite,139 refSeqComposite,238 refSeqComposite,432 refSeqComposite,510 refSeqComposite,1215 refSeqComposite,1226 simpleRepeat,41 tRNAs,2 tRNAs,5 tRNAs,9 tRNAs,18 tRNAs,174 tRNAs,244 tRNAs,286 tRNAs,304 tRNAs,376 tRNAs,424 tRNAs,453 tRNAs,485 transMapEnsemblV5,10 transMapEnsemblV5,88 transMapEnsemblV5,171 transMapEnsemblV5,185 transMapEnsemblV5,292 transMapEnsemblV5,806 transMapEstV5,8 transMapEstV5,57 transMapEstV5,140 transMapEstV5,154 transMapEstV5,261 transMapEstV5,775 transMapRefSeqV5,9 transMapRefSeqV5,57 transMapRefSeqV5,140 transMapRefSeqV5,154 transMapRefSeqV5,261 transMapRefSeqV5,775 transMapRnaV5,9 transMapRnaV5,57 transMapRnaV5,140 transMapRnaV5,154 transMapRnaV5,261 transMapRnaV5,775 transMapV5,7 transMapV5,58 transMapV5,73 transMapV5,246 transMapV5,260 transMapV5,367 transMapV5,881 unipAliSwissprot,18 unipAliTrembl,10 unipChain,8 unipConflict,6 unipDisulfBond,6 unipDomain,4 unipInterest,6 unipLocCytopl,5 unipLocExtra,5 unipLocSignal,6 unipLocTransMemb,5 unipModif,7 unipMut,6 unipOther,6 unipRepeat,4 unipStruct,8 uniprot,7 uniprot,1300 xenoRefGene,6 xenoRefGene,7 xenoRefGene,19 xenoRefGene,194 xenoRefGene,202 xenoRefGene,213 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 genome HLTOGAannotvHg38v1,22 HLTOGAannotvHg38v1,64 HLTOGAannotvHg38v1,71 augustusGene,31 blastHg18KG,51 chainGalGal3,20 chainGalGal3,76 chainGalGal3,208 chainGalGal3,283 chainGalGal3,296 chainGalGal3,790 chainGalGal3,1111 chainGalVar1,23 chainGalVar1,80 chainGalVar1,216 chainGalVar1,293 chainGalVar1,306 chainGalVar1,805 chainGalVar1,1126 chainHg19,19 chainHg19,74 chainHg19,206 chainHg19,281 chainHg19,294 chainHg19,787 chainHg19,1108 chainMm10,19 chainMm10,74 chainMm10,206 chainMm10,281 chainMm10,294 chainMm10,787 chainMm10,1108 chainMm39,19 chainMm39,74 chainMm39,206 chainMm39,281 chainMm39,294 chainMm39,787 chainMm39,1108 chainMonDom4,19 chainMonDom4,74 chainMonDom4,206 chainMonDom4,281 chainMonDom4,294 chainMonDom4,787 chainMonDom4,1108 chainNetGalGal3,23 chainNetGalGal3,79 chainNetGalGal3,211 chainNetGalGal3,286 chainNetGalGal3,299 chainNetGalGal3,793 chainNetGalGal3,1114 chainNetGalVar1,26 chainNetGalVar1,83 chainNetGalVar1,219 chainNetGalVar1,296 chainNetGalVar1,309 chainNetGalVar1,808 chainNetGalVar1,1129 chainNetHg19,22 chainNetHg19,77 chainNetHg19,209 chainNetHg19,284 chainNetHg19,297 chainNetHg19,790 chainNetHg19,1111 chainNetMm10,21 chainNetMm10,76 chainNetMm10,208 chainNetMm10,283 chainNetMm10,296 chainNetMm10,789 chainNetMm10,1110 chainNetMm39,22 chainNetMm39,77 chainNetMm39,209 chainNetMm39,284 chainNetMm39,297 chainNetMm39,790 chainNetMm39,1111 chainNetMonDom4,22 chainNetMonDom4,77 chainNetMonDom4,209 chainNetMonDom4,284 chainNetMonDom4,297 chainNetMonDom4,790 chainNetMonDom4,1111 chainNetOryCun2,22 chainNetOryCun2,77 chainNetOryCun2,209 chainNetOryCun2,284 chainNetOryCun2,297 chainNetOryCun2,790 chainNetOryCun2,1111 chainNetRn6,23 chainNetRn6,79 chainNetRn6,211 chainNetRn6,286 chainNetRn6,299 chainNetRn6,793 chainNetRn6,1114 chainOryCun2,19 chainOryCun2,74 chainOryCun2,206 chainOryCun2,281 chainOryCun2,294 chainOryCun2,787 chainOryCun2,1108 chainRn6,20 chainRn6,76 chainRn6,208 chainRn6,283 chainRn6,296 chainRn6,790 chainRn6,1111 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ensGene,164 ensGene,192 est,28 est,655 est,808 gap,97 gap,140 gold,19 gold,139 intronEst,29 intronEst,39 intronEst,736 intronEst,892 mrna,26 mrna,395 mrna,525 ncbiRefSeqGenomicDiff,11 nestedRepeats,405 netGalGal3,20 netGalGal3,76 netGalGal3,208 netGalGal3,283 netGalGal3,296 netGalGal3,790 netGalGal3,1111 netGalVar1,23 netGalVar1,80 netGalVar1,216 netGalVar1,293 netGalVar1,306 netGalVar1,805 netGalVar1,1126 netHg19,19 netHg19,74 netHg19,206 netHg19,281 netHg19,294 netHg19,787 netHg19,1108 netMm10,19 netMm10,74 netMm10,206 netMm10,281 netMm10,294 netMm10,787 netMm10,1108 netMm39,19 netMm39,74 netMm39,206 netMm39,281 netMm39,294 netMm39,787 netMm39,1108 netMonDom4,19 netMonDom4,74 netMonDom4,206 netMonDom4,281 netMonDom4,294 netMonDom4,787 netMonDom4,1108 netOryCun2,19 netOryCun2,74 netOryCun2,206 netOryCun2,281 netOryCun2,294 netOryCun2,787 netOryCun2,1108 netRn6,20 netRn6,76 netRn6,208 netRn6,283 netRn6,296 netRn6,790 netRn6,1111 nscanGene,46 nscanGene,66 nscanGene,93 nscanGene,317 nscanGene,372 nscanGene,374 refGene,265 refGene,349 refSeqComposite,57 refSeqComposite,291 refSeqComposite,299 refSeqComposite,308 refSeqComposite,326 refSeqComposite,370 refSeqComposite,444 refSeqComposite,467 refSeqComposite,500 refSeqComposite,881 refSeqComposite,928 refSeqComposite,978 refSeqComposite,1064 refSeqComposite,1077 refSeqComposite,1111 refSeqComposite,1124 refSeqComposite,1186 refSeqComposite,1236 refSeqComposite,1450 refSeqComposite,1739 rmsk,428 transMapEnsemblV5,36 transMapEnsemblV5,164 transMapEnsemblV5,181 transMapEnsemblV5,206 transMapEnsemblV5,336 transMapEnsemblV5,347 transMapEnsemblV5,408 transMapEnsemblV5,418 transMapEnsemblV5,452 transMapEnsemblV5,475 transMapEnsemblV5,608 transMapEnsemblV5,746 transMapEstV5,34 transMapEstV5,133 transMapEstV5,150 transMapEstV5,175 transMapEstV5,305 transMapEstV5,316 transMapEstV5,377 transMapEstV5,387 transMapEstV5,421 transMapEstV5,444 transMapEstV5,577 transMapEstV5,715 transMapRefSeqV5,34 transMapRefSeqV5,133 transMapRefSeqV5,150 transMapRefSeqV5,175 transMapRefSeqV5,305 transMapRefSeqV5,316 transMapRefSeqV5,377 transMapRefSeqV5,387 transMapRefSeqV5,421 transMapRefSeqV5,444 transMapRefSeqV5,577 transMapRefSeqV5,715 transMapRnaV5,34 transMapRnaV5,133 transMapRnaV5,150 transMapRnaV5,175 transMapRnaV5,305 transMapRnaV5,316 transMapRnaV5,377 transMapRnaV5,387 transMapRnaV5,421 transMapRnaV5,444 transMapRnaV5,577 transMapRnaV5,715 transMapV5,33 transMapV5,85 transMapV5,239 transMapV5,256 transMapV5,281 transMapV5,411 transMapV5,422 transMapV5,483 transMapV5,493 transMapV5,527 transMapV5,550 transMapV5,683 transMapV5,821 ucscToRefSeq,13 unipAliSwissprot,9 unipAliTrembl,9 uniprot,88 uniprot,103 uniprot,120 uniprot,203 uniprot,216 uniprot,609 uniprot,642 uniprot,717 uniprot,749 uniprot,803 uniprot,811 uniprot,910 uniprot,1141 uniprot,1377 uniprot,1494 uniprot,1520 uniprot,1543 uniprot,1730 uniprot,1847 uniprot,1858 uniprot,1891 xenoMrna,469 xenoMrna,599 xenoRefGene,226 xenoRefGene,309 genome-wide refSeqComposite,1502 genome.bed uniprot,1935 uniprot,1937 genomes chainGalGal3,26 chainGalGal3,592 chainGalGal3,1073 chainGalVar1,29 chainGalVar1,605 chainGalVar1,1088 chainHg19,25 chainHg19,589 chainHg19,1070 chainMm10,25 chainMm10,589 chainMm10,1070 chainMm39,25 chainMm39,589 chainMm39,1070 chainMonDom4,25 chainMonDom4,589 chainMonDom4,1070 chainNetGalGal3,29 chainNetGalGal3,595 chainNetGalGal3,1076 chainNetGalVar1,32 chainNetGalVar1,608 chainNetGalVar1,1091 chainNetHg19,28 chainNetHg19,592 chainNetHg19,1073 chainNetMm10,27 chainNetMm10,591 chainNetMm10,1072 chainNetMm39,28 chainNetMm39,592 chainNetMm39,1073 chainNetMonDom4,28 chainNetMonDom4,592 chainNetMonDom4,1073 chainNetOryCun2,28 chainNetOryCun2,592 chainNetOryCun2,1073 chainNetRn6,29 chainNetRn6,595 chainNetRn6,1076 chainOryCun2,25 chainOryCun2,589 chainOryCun2,1070 chainRn6,26 chainRn6,592 chainRn6,1073 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netGalGal3,26 netGalGal3,592 netGalGal3,1073 netGalVar1,29 netGalVar1,605 netGalVar1,1088 netHg19,25 netHg19,589 netHg19,1070 netMm10,25 netMm10,589 netMm10,1070 netMm39,25 netMm39,589 netMm39,1070 netMonDom4,25 netMonDom4,589 netMonDom4,1070 netOryCun2,25 netOryCun2,589 netOryCun2,1070 netRn6,26 netRn6,592 netRn6,1073 refGene,418 refSeqComposite,573 refSeqComposite,1808 rmsk,392 rmsk,406 transMapEnsemblV5,364 transMapEnsemblV5,372 transMapEstV5,333 transMapEstV5,341 transMapRefSeqV5,333 transMapRefSeqV5,341 transMapRnaV5,333 transMapRnaV5,341 transMapV5,439 transMapV5,447 uniprot,863 uniprot,941 windowmaskerSdust,105 xenoRefGene,378 genomic HLTOGAannotvHg38v1,122 chainGalGal3,500 chainGalGal3,1025 chainGalGal3,1041 chainGalVar1,511 chainGalVar1,1040 chainGalVar1,1056 chainHg19,497 chainHg19,1022 chainHg19,1038 chainMm10,497 chainMm10,1022 chainMm10,1038 chainMm39,497 chainMm39,1022 chainMm39,1038 chainMonDom4,497 chainMonDom4,1022 chainMonDom4,1038 chainNetGalGal3,503 chainNetGalGal3,1028 chainNetGalGal3,1044 chainNetGalVar1,514 chainNetGalVar1,1043 chainNetGalVar1,1059 chainNetHg19,500 chainNetHg19,1025 chainNetHg19,1041 chainNetMm10,499 chainNetMm10,1024 chainNetMm10,1040 chainNetMm39,500 chainNetMm39,1025 chainNetMm39,1041 chainNetMonDom4,500 chainNetMonDom4,1025 chainNetMonDom4,1041 chainNetOryCun2,500 chainNetOryCun2,1025 chainNetOryCun2,1041 chainNetRn6,503 chainNetRn6,1028 chainNetRn6,1044 chainOryCun2,497 chainOryCun2,1022 chainOryCun2,1038 chainRn6,500 chainRn6,1025 chainRn6,1041 est,91 est,409 est,610 est,721 genscan,92 genscan,218 intronEst,74 intronEst,172 intronEst,490 intronEst,691 intronEst,802 mrna,346 mrna,437 netGalGal3,500 netGalGal3,1025 netGalGal3,1041 netGalVar1,511 netGalVar1,1040 netGalVar1,1056 netHg19,497 netHg19,1022 netHg19,1038 netMm10,497 netMm10,1022 netMm10,1038 netMm39,497 netMm39,1022 netMm39,1038 netMonDom4,497 netMonDom4,1022 netMonDom4,1038 netOryCun2,497 netOryCun2,1022 netOryCun2,1038 netRn6,500 netRn6,1025 netRn6,1041 nscanGene,138 nscanGene,346 refGene,203 refGene,315 refSeqComposite,840 refSeqComposite,908 refSeqComposite,932 refSeqComposite,1023 refSeqComposite,1081 refSeqComposite,1286 tRNAs,108 tRNAs,379 tRNAs,426 tRNAs,455 tRNAs,487 transMapEnsemblV5,128 transMapEstV5,97 transMapRefSeqV5,97 transMapRnaV5,97 transMapV5,203 uniprot,28 uniprot,450 windowmaskerSdust,3 xenoMrna,102 xenoMrna,420 xenoMrna,511 xenoRefGene,164 xenoRefGene,276 genomics chainGalGal3,12 chainGalVar1,15 chainHg19,11 chainMm10,11 chainMm39,11 chainMonDom4,11 chainNetGalGal3,15 chainNetGalGal3Viewchain,13 chainNetGalGal3Viewnet,13 chainNetGalVar1,18 chainNetGalVar1Viewchain,14 chainNetGalVar1Viewnet,14 chainNetHg19,14 chainNetHg19Viewchain,12 chainNetHg19Viewnet,12 chainNetMm10,13 chainNetMm10Viewchain,12 chainNetMm10Viewnet,12 chainNetMm39,14 chainNetMm39Viewchain,12 chainNetMm39Viewnet,12 chainNetMonDom4,14 chainNetMonDom4Viewchain,12 chainNetMonDom4Viewnet,12 chainNetOryCun2,14 chainNetOryCun2Viewchain,12 chainNetOryCun2Viewnet,12 chainNetRn6,15 chainNetRn6Viewchain,13 chainNetRn6Viewnet,13 chainOryCun2,11 chainRn6,12 netGalGal3,12 netGalVar1,15 netHg19,11 netMm10,11 netMm39,11 netMonDom4,11 netOryCun2,11 netRn6,12 nscanGene,26 nscanGene,232 transMapEnsemblV5,745 transMapEnsemblV5,800 transMapEstV5,714 transMapEstV5,769 transMapRefSeqV5,714 transMapRefSeqV5,769 transMapRnaV5,714 transMapRnaV5,769 transMapV5,820 transMapV5,875 genscan genscan,1 genscan,3 genscan,17 genscan,136 genscan,177 genuine intronEst,113 gertz windowmaskerSdust,92 gff refSeqComposite,1170 gigabases tRNAs,96 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 gish blastHg18KG,157 github uniprot,1559 github.com HLTOGAannotvHg38v1,331 give transMapEnsemblV5,440 transMapEstV5,409 transMapRefSeqV5,409 transMapRnaV5,409 transMapV5,515 xenoMrna,112 given refSeqComposite,1542 transMapEnsemblV5,484 transMapEnsemblV5,657 transMapEstV5,453 transMapEstV5,626 transMapRefSeqV5,453 transMapRefSeqV5,626 transMapRnaV5,453 transMapRnaV5,626 transMapV5,559 transMapV5,732 uniprot,741 uniprot,1235 uniprot,1240 uniprot,1808 global transMapEnsemblV5,357 transMapEstV5,326 transMapRefSeqV5,326 transMapRnaV5,326 transMapV5,432 glyco uniprot,469 glycosylation uniprot,341 uniprot,584 gnomon refSeqComposite,375 go est,417 est,438 genscan,113 intronEst,498 intronEst,519 mrna,354 mrna,377 refGene,220 refSeqComposite,857 uniprot,1412 xenoMrna,428 xenoMrna,451 xenoRefGene,181 gold gold,81 gold,95 goldenpath uniprot,1907 gr refGene,363 refSeqComposite,1753 xenoRefGene,323 graph gc5Base,59 gc5Base,78 quality,74 graphical chainGalGal3,447 chainGalVar1,458 chainHg19,444 chainMm10,444 chainMm39,444 chainMonDom4,444 chainNetGalGal3,450 chainNetGalVar1,461 chainNetHg19,447 chainNetMm10,446 chainNetMm39,447 chainNetMonDom4,447 chainNetOryCun2,447 chainNetRn6,450 chainOryCun2,444 chainRn6,447 gold,120 netGalGal3,447 netGalVar1,458 netHg19,444 netMm10,444 netMm39,444 netMonDom4,444 netOryCun2,444 netRn6,447 quality,102 rmsk,211 grch37 chainHg19,6 chainHg19,68 chainHg19,308 chainNetHg19,7 chainNetHg19,71 chainNetHg19,311 chainNetHg19Viewchain,5 chainNetHg19Viewnet,5 netHg19,6 netHg19,68 netHg19,308 grcm38 chainMm10,6 chainMm10,68 chainMm10,308 chainNetMm10,6 chainNetMm10,70 chainNetMm10,310 chainNetMm10Viewchain,5 chainNetMm10Viewnet,5 netMm10,6 netMm10,68 netMm10,308 grcm39 chainMm39,6 chainMm39,68 chainMm39,308 chainNetMm39,7 chainNetMm39,71 chainNetMm39,311 chainNetMm39Viewchain,5 chainNetMm39Viewnet,5 netMm39,6 netMm39,68 netMm39,308 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 uniprot,588 uniprot,593 grey tRNAs,206 gross nscanGene,270 group augustusGene,198 augustusGene,235 chainGalGal3,640 chainGalVar1,655 chainHg19,637 chainMm10,637 chainMm39,637 chainMonDom4,637 chainNetGalGal3,643 chainNetGalVar1,658 chainNetHg19,640 chainNetMm10,639 chainNetMm39,640 chainNetMonDom4,640 chainNetOryCun2,640 chainNetRn6,643 chainOryCun2,637 chainRn6,640 netGalGal3,640 netGalVar1,655 netHg19,637 netMm10,637 netMm39,637 netMonDom4,637 netOryCun2,637 netRn6,640 nscanGene,233 refSeqComposite,388 refSeqComposite,449 uniprot,430 grouped gold,31 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 intronEst,90 tRNAs,165 uniprot,907 uniprot,909 uniprot,1930 gtf ensGene,96 refSeqComposite,1568 refSeqComposite,1578 refSeqComposite,1590 gtrnadb tRNAs,111 tRNAs,332 tRNAs,370 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5Base,21 guess tRNAs,256 guides tRNAs,261 guinea blastHg18KG,74 blastHg18KG,84 chainGalGal3,74 chainGalGal3,101 chainGalGal3,159 chainGalGal3,206 chainGalGal3,273 chainGalGal3,281 chainGalGal3,582 chainGalGal3,635 chainGalVar1,78 chainGalVar1,107 chainGalVar1,167 chainGalVar1,214 chainGalVar1,283 chainGalVar1,291 chainGalVar1,595 chainGalVar1,650 chainHg19,72 chainHg19,99 chainHg19,157 chainHg19,204 chainHg19,271 chainHg19,279 chainHg19,579 chainHg19,632 chainMm10,72 chainMm10,99 chainMm10,157 chainMm10,204 chainMm10,271 chainMm10,279 chainMm10,579 chainMm10,632 chainMm39,72 chainMm39,99 chainMm39,157 chainMm39,204 chainMm39,271 chainMm39,279 chainMm39,579 chainMm39,632 chainMonDom4,72 chainMonDom4,99 chainMonDom4,157 chainMonDom4,204 chainMonDom4,271 chainMonDom4,279 chainMonDom4,579 chainMonDom4,632 chainNetGalGal3,77 chainNetGalGal3,104 chainNetGalGal3,162 chainNetGalGal3,209 chainNetGalGal3,276 chainNetGalGal3,284 chainNetGalGal3,585 chainNetGalGal3,638 chainNetGalVar1,81 chainNetGalVar1,110 chainNetGalVar1,170 chainNetGalVar1,217 chainNetGalVar1,286 chainNetGalVar1,294 chainNetGalVar1,598 chainNetGalVar1,653 chainNetHg19,75 chainNetHg19,102 chainNetHg19,160 chainNetHg19,207 chainNetHg19,274 chainNetHg19,282 chainNetHg19,582 chainNetHg19,635 chainNetMm10,74 chainNetMm10,101 chainNetMm10,159 chainNetMm10,206 chainNetMm10,273 chainNetMm10,281 chainNetMm10,581 chainNetMm10,634 chainNetMm39,75 chainNetMm39,102 chainNetMm39,160 chainNetMm39,207 chainNetMm39,274 chainNetMm39,282 chainNetMm39,582 chainNetMm39,635 chainNetMonDom4,75 chainNetMonDom4,102 chainNetMonDom4,160 chainNetMonDom4,207 chainNetMonDom4,274 chainNetMonDom4,282 chainNetMonDom4,582 chainNetMonDom4,635 chainNetOryCun2,75 chainNetOryCun2,102 chainNetOryCun2,160 chainNetOryCun2,207 chainNetOryCun2,274 chainNetOryCun2,282 chainNetOryCun2,582 chainNetOryCun2,635 chainNetRn6,77 chainNetRn6,104 chainNetRn6,162 chainNetRn6,209 chainNetRn6,276 chainNetRn6,284 chainNetRn6,585 chainNetRn6,638 chainOryCun2,72 chainOryCun2,99 chainOryCun2,157 chainOryCun2,204 chainOryCun2,271 chainOryCun2,279 chainOryCun2,579 chainOryCun2,632 chainRn6,74 chainRn6,101 chainRn6,159 chainRn6,206 chainRn6,273 chainRn6,281 chainRn6,582 chainRn6,635 est,1 est,4 est,18 est,646 gold,17 intronEst,3 intronEst,19 intronEst,126 intronEst,727 mrna,1 mrna,4 mrna,19 mrna,388 netGalGal3,74 netGalGal3,101 netGalGal3,159 netGalGal3,206 netGalGal3,273 netGalGal3,281 netGalGal3,582 netGalGal3,635 netGalVar1,78 netGalVar1,107 netGalVar1,167 netGalVar1,214 netGalVar1,283 netGalVar1,291 netGalVar1,595 netGalVar1,650 netHg19,72 netHg19,99 netHg19,157 netHg19,204 netHg19,271 netHg19,279 netHg19,579 netHg19,632 netMm10,72 netMm10,99 netMm10,157 netMm10,204 netMm10,271 netMm10,279 netMm10,579 netMm10,632 netMm39,72 netMm39,99 netMm39,157 netMm39,204 netMm39,271 netMm39,279 netMm39,579 netMm39,632 netMonDom4,72 netMonDom4,99 netMonDom4,157 netMonDom4,204 netMonDom4,271 netMonDom4,279 netMonDom4,579 netMonDom4,632 netOryCun2,72 netOryCun2,99 netOryCun2,157 netOryCun2,204 netOryCun2,271 netOryCun2,279 netOryCun2,579 netOryCun2,632 netRn6,74 netRn6,101 netRn6,159 netRn6,206 netRn6,273 netRn6,281 netRn6,582 netRn6,635 nscanGene,105 nscanGene,180 quality,3 quality,95 refGene,22 refGene,263 refSeqComposite,19 refSeqComposite,442 refSeqComposite,464 refSeqComposite,498 refSeqComposite,1234 transMapEnsemblV5,90 transMapEnsemblV5,203 transMapEnsemblV5,334 transMapEstV5,59 transMapEstV5,172 transMapEstV5,303 transMapRefSeqV5,59 transMapRefSeqV5,172 transMapRefSeqV5,303 transMapRnaV5,59 transMapRnaV5,172 transMapRnaV5,303 transMapV5,60 transMapV5,278 transMapV5,409 xenoMrna,29 xenoMrna,467 xenoRefGene,24 xenoRefGene,224 h uniprot,2013 haas nscanGene,291 had transMapEnsemblV5,195 transMapEstV5,164 transMapRefSeqV5,164 transMapRnaV5,164 transMapV5,270 haeussler uniprot,1945 handful uniprot,1180 hannick nscanGene,302 haplotype uniprot,852 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainGalGal3,944 chainGalGal3,1101 chainGalVar1,959 chainGalVar1,1116 chainHg19,941 chainHg19,1098 chainMm10,941 chainMm10,1098 chainMm39,941 chainMm39,1098 chainMonDom4,941 chainMonDom4,1098 chainNetGalGal3,947 chainNetGalGal3,1104 chainNetGalVar1,962 chainNetGalVar1,1119 chainNetHg19,944 chainNetHg19,1101 chainNetMm10,943 chainNetMm10,1100 chainNetMm39,944 chainNetMm39,1101 chainNetMonDom4,944 chainNetMonDom4,1101 chainNetOryCun2,944 chainNetOryCun2,1101 chainNetRn6,947 chainNetRn6,1104 chainOryCun2,941 chainOryCun2,1098 chainRn6,944 chainRn6,1101 netGalGal3,944 netGalGal3,1101 netGalVar1,959 netGalVar1,1116 netHg19,941 netHg19,1098 netMm10,941 netMm10,1098 netMm39,941 netMm39,1098 netMonDom4,941 netMonDom4,1098 netOryCun2,941 netOryCun2,1098 netRn6,944 netRn6,1101 harris chainGalGal3,1018 chainGalVar1,1033 chainHg19,1015 chainMm10,1015 chainMm39,1015 chainMonDom4,1015 chainNetGalGal3,1021 chainNetGalVar1,1036 chainNetHg19,1018 chainNetMm10,1017 chainNetMm39,1018 chainNetMonDom4,1018 chainNetOryCun2,1018 chainNetRn6,1021 chainOryCun2,1015 chainRn6,1018 netGalGal3,1018 netGalVar1,1033 netHg19,1015 netMm10,1015 netMm39,1015 netMonDom4,1015 netOryCun2,1015 netRn6,1018 hart refGene,374 refSeqComposite,1764 xenoRefGene,334 has est,117 intronEst,198 mrna,63 nestedRepeats,246 refGene,107 refSeqComposite,617 refSeqComposite,638 refSeqComposite,674 refSeqComposite,686 refSeqComposite,699 refSeqComposite,818 transMapV5,146 uniprot,33 uniprot,46 uniprot,154 uniprot,606 uniprot,1195 uniprot,1232 uniprot,1381 xenoMrna,137 xenoRefGene,68 haussler augustusGene,292 chainGalGal3,979 chainGalGal3,1059 chainGalGal3,1103 chainGalVar1,994 chainGalVar1,1074 chainGalVar1,1118 chainHg19,976 chainHg19,1056 chainHg19,1100 chainMm10,976 chainMm10,1056 chainMm10,1100 chainMm39,976 chainMm39,1056 chainMm39,1100 chainMonDom4,976 chainMonDom4,1056 chainMonDom4,1100 chainNetGalGal3,982 chainNetGalGal3,1062 chainNetGalGal3,1106 chainNetGalVar1,997 chainNetGalVar1,1077 chainNetGalVar1,1121 chainNetHg19,979 chainNetHg19,1059 chainNetHg19,1103 chainNetMm10,978 chainNetMm10,1058 chainNetMm10,1102 chainNetMm39,979 chainNetMm39,1059 chainNetMm39,1103 chainNetMonDom4,979 chainNetMonDom4,1059 chainNetMonDom4,1103 chainNetOryCun2,979 chainNetOryCun2,1059 chainNetOryCun2,1103 chainNetRn6,982 chainNetRn6,1062 chainNetRn6,1106 chainOryCun2,976 chainOryCun2,1056 chainOryCun2,1100 chainRn6,979 chainRn6,1059 chainRn6,1103 netGalGal3,979 netGalGal3,1059 netGalGal3,1103 netGalVar1,994 netGalVar1,1074 netGalVar1,1118 netHg19,976 netHg19,1056 netHg19,1100 netMm10,976 netMm10,1056 netMm10,1100 netMm39,976 netMm39,1056 netMm39,1100 netMonDom4,976 netMonDom4,1056 netMonDom4,1100 netOryCun2,976 netOryCun2,1056 netOryCun2,1100 netRn6,979 netRn6,1059 netRn6,1103 transMapEnsemblV5,763 transMapEnsemblV5,797 transMapEstV5,732 transMapEstV5,766 transMapRefSeqV5,732 transMapRefSeqV5,766 transMapRnaV5,732 transMapRnaV5,766 transMapV5,838 transMapV5,872 have chainGalGal3,576 chainGalVar1,587 chainHg19,573 chainMm10,573 chainMm39,573 chainMonDom4,573 chainNetGalGal3,579 chainNetGalVar1,590 chainNetHg19,576 chainNetMm10,575 chainNetMm39,576 chainNetMonDom4,576 chainNetOryCun2,576 chainNetRn6,579 chainOryCun2,573 chainRn6,576 intronEst,7 intronEst,89 nestedRepeats,88 netGalGal3,576 netGalVar1,587 netHg19,573 netMm10,573 netMm39,573 netMonDom4,573 netOryCun2,573 netRn6,576 rmsk,69 rmsk,108 tRNAs,181 tRNAs,214 uniprot,170 uniprot,302 uniprot,942 uniprot,1000 uniprot,1042 uniprot,1444 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 est,694 est,703 intronEst,775 intronEst,784 mrna,410 mrna,419 refGene,288 refGene,297 refSeqComposite,1259 refSeqComposite,1268 xenoMrna,483 xenoMrna,493 xenoRefGene,249 xenoRefGene,258 heavily uniprot,1533 height quality,28 heights quality,49 helices uniprot,366 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 ensGene,126 gc5Base,61 quality,76 refGene,66 refSeqComposite,125 helpful est,145 intronEst,226 mrna,91 xenoMrna,165 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 hence xenoMrna,91 here refSeqComposite,994 refSeqComposite,1197 refSeqComposite,1469 refSeqComposite,1491 refSeqComposite,1685 rmsk,127 transMapEnsemblV5,137 transMapEnsemblV5,151 transMapEnsemblV5,644 transMapEstV5,106 transMapEstV5,120 transMapEstV5,613 transMapRefSeqV5,106 transMapRefSeqV5,120 transMapRefSeqV5,613 transMapRnaV5,106 transMapRnaV5,120 transMapRnaV5,613 transMapV5,212 transMapV5,226 transMapV5,719 uniprot,1795 xenoMrna,86 heterochromatic gap,25 hg.conf refSeqComposite,1640 hg18 blastHg18KG,31 nscanGene,110 hg19 chainHg19,7 chainHg19,69 chainHg19,309 chainNetHg19,1 chainNetHg19,8 chainNetHg19,72 chainNetHg19,312 chainNetHg19Viewchain,6 chainNetHg19Viewnet,6 netHg19,7 netHg19,69 netHg19,309 refSeqComposite,574 uniprot,847 uniprot,860 hg38 HLTOGAannotvHg38v1,3 HLTOGAannotvHg38v1,8 HLTOGAannotvHg38v1,54 refSeqComposite,518 refSeqComposite,576 uniprot,700 uniprot,843 uniprot,1177 uniprot,1367 uniprot,1909 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 refSeqComposite,1552 transMapEnsemblV5,663 transMapEstV5,632 transMapRefSeqV5,632 transMapRnaV5,632 transMapV5,738 uniprot,1814 uniprot,1906 uniprot,1916 hgmd refSeqComposite,550 hgvs refSeqComposite,903 refSeqComposite,916 refSeqComposite,955 refSeqComposite,984 refSeqComposite,1043 refSeqComposite,1070 refSeqComposite,1074 refSeqComposite,1094 hiatt refGene,364 refSeqComposite,1754 xenoRefGene,324 hidden augustusGene,324 uniprot,182 uniprot,223 hide refGene,231 refSeqComposite,175 uniprot,659 uniprot,667 xenoRefGene,192 hierarchy chainGalGal3,827 chainGalVar1,842 chainHg19,824 chainMm10,824 chainMm39,824 chainMonDom4,824 chainNetGalGal3,830 chainNetGalVar1,845 chainNetHg19,827 chainNetMm10,826 chainNetMm39,827 chainNetMonDom4,827 chainNetOryCun2,827 chainNetRn6,830 chainOryCun2,824 chainRn6,827 netGalGal3,827 netGalVar1,842 netHg19,824 netMm10,824 netMm39,824 netMonDom4,824 netOryCun2,824 netRn6,827 high gc5Base,29 transMapV5,119 higher chainGalGal3,859 chainGalVar1,874 chainHg19,856 chainMm10,856 chainMm39,856 chainMonDom4,856 chainNetGalGal3,862 chainNetGalVar1,877 chainNetHg19,859 chainNetMm10,858 chainNetMm39,859 chainNetMonDom4,859 chainNetOryCun2,859 chainNetRn6,862 chainOryCun2,856 chainRn6,859 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netGalGal3,859 netGalVar1,874 netHg19,856 netMm10,856 netMm39,856 netMonDom4,856 netOryCun2,856 netRn6,859 rmsk,230 transMapV5,147 higher-level chainGalGal3,876 chainGalVar1,891 chainHg19,873 chainMm10,873 chainMm39,873 chainMonDom4,873 chainNetGalGal3,879 chainNetGalVar1,894 chainNetHg19,876 chainNetMm10,875 chainNetMm39,876 chainNetMonDom4,876 chainNetOryCun2,876 chainNetRn6,879 chainOryCun2,873 chainRn6,876 netGalGal3,876 netGalVar1,891 netHg19,873 netMm10,873 netMm39,873 netMonDom4,873 netOryCun2,873 netRn6,876 higher-scoring chainGalGal3,820 chainGalGal3,839 chainGalVar1,835 chainGalVar1,854 chainHg19,817 chainHg19,836 chainMm10,817 chainMm10,836 chainMm39,817 chainMm39,836 chainMonDom4,817 chainMonDom4,836 chainNetGalGal3,823 chainNetGalGal3,842 chainNetGalVar1,838 chainNetGalVar1,857 chainNetHg19,820 chainNetHg19,839 chainNetMm10,819 chainNetMm10,838 chainNetMm39,820 chainNetMm39,839 chainNetMonDom4,820 chainNetMonDom4,839 chainNetOryCun2,820 chainNetOryCun2,839 chainNetRn6,823 chainNetRn6,842 chainOryCun2,817 chainOryCun2,836 chainRn6,820 chainRn6,839 netGalGal3,820 netGalGal3,839 netGalVar1,835 netGalVar1,854 netHg19,817 netHg19,836 netMm10,817 netMm10,836 netMm39,817 netMm39,836 netMonDom4,817 netMonDom4,836 netOryCun2,817 netOryCun2,836 netRn6,820 netRn6,839 highest est,696 intronEst,777 mrna,412 refGene,290 refSeqComposite,1261 uniprot,948 uniprot,1113 xenoMrna,485 xenoRefGene,251 highest-scoring chainGalGal3,399 chainGalGal3,786 chainGalVar1,410 chainGalVar1,801 chainHg19,396 chainHg19,783 chainMm10,396 chainMm10,783 chainMm39,396 chainMm39,783 chainMonDom4,396 chainMonDom4,783 chainNetGalGal3,402 chainNetGalGal3,789 chainNetGalVar1,413 chainNetGalVar1,804 chainNetHg19,399 chainNetHg19,786 chainNetMm10,398 chainNetMm10,785 chainNetMm39,399 chainNetMm39,786 chainNetMonDom4,399 chainNetMonDom4,786 chainNetOryCun2,399 chainNetOryCun2,786 chainNetRn6,402 chainNetRn6,789 chainOryCun2,396 chainOryCun2,783 chainRn6,399 chainRn6,786 netGalGal3,399 netGalGal3,786 netGalVar1,410 netGalVar1,801 netHg19,396 netHg19,783 netMm10,396 netMm10,783 netMm39,396 netMm39,783 netMonDom4,396 netMonDom4,783 netOryCun2,396 netOryCun2,783 netRn6,399 netRn6,786 highlight est,336 gc5Base,49 intronEst,417 mrna,282 quality,65 xenoMrna,356 highlighted est,306 est,324 intronEst,387 intronEst,405 mrna,252 mrna,270 uniprot,580 xenoMrna,326 xenoMrna,344 highly microsat,40 tRNAs,69 hilgers HLTOGAannotvHg38v1,352 hiller HLTOGAannotvHg38v1,322 hillerlab HLTOGAannotvHg38v1,332 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainGalGal3,1055 chainGalVar1,1070 chainHg19,1052 chainMm10,1052 chainMm39,1052 chainMonDom4,1052 chainNetGalGal3,1058 chainNetGalVar1,1073 chainNetHg19,1055 chainNetMm10,1054 chainNetMm39,1055 chainNetMonDom4,1055 chainNetOryCun2,1055 chainNetRn6,1058 chainOryCun2,1052 chainRn6,1055 netGalGal3,1055 netGalVar1,1070 netHg19,1052 netMm10,1052 netMm39,1052 netMonDom4,1052 netOryCun2,1052 netRn6,1055 hiram gc5Base,82 quality,108 ucscToRefSeq,45 his chainGalGal3,953 chainGalVar1,968 chainHg19,950 chainMm10,950 chainMm39,950 chainMonDom4,950 chainNetGalGal3,956 chainNetGalVar1,971 chainNetHg19,953 chainNetMm10,952 chainNetMm39,953 chainNetMonDom4,953 chainNetOryCun2,953 chainNetRn6,956 chainOryCun2,950 chainRn6,953 netGalGal3,953 netGalVar1,968 netHg19,950 netMm10,950 netMm39,950 netMonDom4,950 netOryCun2,950 netRn6,953 homology nscanGene,347 homology-based HLTOGAannotvHg38v1,26 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 hou chainGalGal3,932 chainGalVar1,947 chainHg19,929 chainMm10,929 chainMm39,929 chainMonDom4,929 chainNetGalGal3,935 chainNetGalVar1,950 chainNetHg19,932 chainNetMm10,931 chainNetMm39,932 chainNetMonDom4,932 chainNetOryCun2,932 chainNetRn6,935 chainOryCun2,929 chainRn6,932 netGalGal3,932 netGalVar1,947 netHg19,929 netMm10,929 netMm39,929 netMonDom4,929 netOryCun2,929 netRn6,932 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainGalGal3,887 chainGalGal3,904 chainGalVar1,902 chainGalVar1,919 chainHg19,884 chainHg19,901 chainMm10,884 chainMm10,901 chainMm39,884 chainMm39,901 chainMonDom4,884 chainMonDom4,901 chainNetGalGal3,890 chainNetGalGal3,907 chainNetGalVar1,905 chainNetGalVar1,922 chainNetHg19,887 chainNetHg19,904 chainNetMm10,886 chainNetMm10,903 chainNetMm39,887 chainNetMm39,904 chainNetMonDom4,887 chainNetMonDom4,904 chainNetOryCun2,887 chainNetOryCun2,904 chainNetRn6,890 chainNetRn6,907 chainOryCun2,884 chainOryCun2,901 chainRn6,887 chainRn6,904 netGalGal3,887 netGalGal3,904 netGalVar1,902 netGalVar1,919 netHg19,884 netHg19,901 netMm10,884 netMm10,901 netMm39,884 netMm39,901 netMonDom4,884 netMonDom4,901 netOryCun2,884 netOryCun2,901 netRn6,887 netRn6,904 refSeqComposite,97 rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 transMapEnsemblV5,488 transMapEstV5,457 transMapRefSeqV5,457 transMapRnaV5,457 transMapV5,563 hox refSeqComposite,415 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 refSeqComposite,1551 rmsk,355 transMapEnsemblV5,662 transMapEstV5,631 transMapRefSeqV5,631 transMapRnaV5,631 transMapV5,737 uniprot,1813 https uniprot,1905 uniprot,1915 hub uniprot,711 uniprot,1672 uniprot,1679 hubbard ensGene,44 ensGene,168 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 hum uniprot,2043 human HLTOGAannotvHg38v1,7 HLTOGAannotvHg38v1,53 augustusGene,205 augustusGene,210 augustusGene,276 blastHg18KG,1 blastHg18KG,3 blastHg18KG,42 blastHg18KG,50 chainGalGal3,1072 chainGalVar1,1087 chainHg19,1 chainHg19,3 chainHg19,65 chainHg19,97 chainHg19,150 chainHg19,270 chainHg19,297 chainHg19,578 chainHg19,627 chainHg19,1069 chainMm10,1069 chainMm39,1069 chainMonDom4,1069 chainNetGalGal3,1075 chainNetGalVar1,1090 chainNetHg19,4 chainNetHg19,68 chainNetHg19,100 chainNetHg19,153 chainNetHg19,273 chainNetHg19,300 chainNetHg19,581 chainNetHg19,630 chainNetHg19,1072 chainNetHg19Viewchain,2 chainNetHg19Viewnet,2 chainNetMm10,1071 chainNetMm39,1072 chainNetMonDom4,1072 chainNetOryCun2,1072 chainNetRn6,1075 chainOryCun2,1069 chainRn6,1072 genscan,217 nestedRepeats,404 netGalGal3,1072 netGalVar1,1087 netHg19,1 netHg19,3 netHg19,65 netHg19,97 netHg19,150 netHg19,270 netHg19,297 netHg19,578 netHg19,627 netHg19,1069 netMm10,1069 netMm39,1069 netMonDom4,1069 netOryCun2,1069 netRn6,1072 nscanGene,109 refSeqComposite,246 refSeqComposite,298 refSeqComposite,561 refSeqComposite,572 refSeqComposite,1076 rmsk,427 transMapEnsemblV5,42 transMapEnsemblV5,365 transMapEnsemblV5,474 transMapEnsemblV5,741 transMapEnsemblV5,809 transMapEstV5,334 transMapEstV5,443 transMapEstV5,710 transMapEstV5,778 transMapRefSeqV5,334 transMapRefSeqV5,443 transMapRefSeqV5,710 transMapRefSeqV5,778 transMapRnaV5,334 transMapRnaV5,443 transMapRnaV5,710 transMapRnaV5,778 transMapV5,105 transMapV5,134 transMapV5,440 transMapV5,549 transMapV5,816 transMapV5,884 uniprot,699 uniprot,940 uniprot,2040 human-mouse chainGalGal3,1107 chainGalVar1,1122 chainHg19,1104 chainMm10,1104 chainMm39,1104 chainMonDom4,1104 chainNetGalGal3,1110 chainNetGalVar1,1125 chainNetHg19,1107 chainNetMm10,1106 chainNetMm39,1107 chainNetMonDom4,1107 chainNetOryCun2,1107 chainNetRn6,1110 chainOryCun2,1104 chainRn6,1107 netGalGal3,1107 netGalVar1,1122 netHg19,1104 netMm10,1104 netMm39,1104 netMonDom4,1104 netOryCun2,1104 netRn6,1107 hybridizes est,500 intronEst,581 i est,754 est,778 intronEst,838 intronEst,862 mrna,471 mrna,495 nscanGene,338 xenoMrna,545 xenoMrna,569 i.e intronEst,72 tRNAs,148 icon refSeqComposite,754 id nestedRepeats,10 nestedRepeats,106 refSeqComposite,1133 uniprot,1026 uniprot,1051 uniprot,1060 uniprot,1282 identical uniprot,1106 uniprot,1144 uniprot,1147 identification tRNAs,480 identified blastHg18KG,28 chainGalGal3,948 chainGalVar1,963 chainHg19,945 chainMm10,945 chainMm39,945 chainMonDom4,945 chainNetGalGal3,951 chainNetGalVar1,966 chainNetHg19,948 chainNetMm10,947 chainNetMm39,948 chainNetMonDom4,948 chainNetOryCun2,948 chainNetRn6,951 chainOryCun2,945 chainRn6,948 est,700 intronEst,781 netGalGal3,948 netGalVar1,963 netHg19,945 netMm10,945 netMm39,945 netMonDom4,945 netOryCun2,945 netRn6,948 refGene,294 refSeqComposite,1265 tRNAs,6 transMapEnsemblV5,515 transMapEstV5,484 transMapRefSeqV5,484 transMapRnaV5,484 transMapV5,590 xenoRefGene,255 identifier refSeqComposite,785 refSeqComposite,804 transMapEnsemblV5,486 transMapEstV5,455 transMapRefSeqV5,455 transMapRnaV5,455 transMapV5,561 identifiers transMapEnsemblV5,387 transMapEnsemblV5,446 transMapEnsemblV5,464 transMapEstV5,356 transMapEstV5,415 transMapEstV5,433 transMapRefSeqV5,356 transMapRefSeqV5,415 transMapRefSeqV5,433 transMapRnaV5,356 transMapRnaV5,415 transMapRnaV5,433 transMapV5,462 transMapV5,521 transMapV5,539 ucscToRefSeq,19 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 tRNAs,421 identity est,698 est,706 est,718 intronEst,779 intronEst,787 intronEst,799 microsat,71 mrna,414 mrna,422 mrna,434 nestedRepeats,187 nestedRepeats,222 refGene,292 refGene,300 refGene,312 refSeqComposite,1263 refSeqComposite,1271 refSeqComposite,1283 xenoMrna,487 xenoMrna,496 xenoMrna,508 xenoRefGene,253 xenoRefGene,261 xenoRefGene,273 ideogram cytoBandIdeo,3 cytoBandIdeo,4 ids uniprot,1292 if est,279 est,291 est,307 est,343 est,360 gap,44 intronEst,360 intronEst,372 intronEst,388 intronEst,424 intronEst,441 mrna,225 mrna,237 mrna,253 mrna,289 mrna,306 nestedRepeats,137 refGene,244 transMapEnsemblV5,246 transMapEstV5,215 transMapRefSeqV5,215 transMapRnaV5,215 transMapV5,321 uniprot,602 uniprot,688 uniprot,1030 uniprot,1077 uniprot,1230 uniprot,1261 uniprot,1323 uniprot,1442 xenoMrna,299 xenoMrna,311 xenoMrna,327 xenoMrna,363 xenoMrna,380 xenoRefGene,205 ignored refSeqComposite,1456 uniprot,1426 ii215-25 augustusGene,338 images tRNAs,319 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 implementation nscanGene,247 implements HLTOGAannotvHg38v1,73 important uniprot,900 improve augustusGene,302 nscanGene,278 transMapEnsemblV5,773 transMapEstV5,742 transMapRefSeqV5,742 transMapRnaV5,742 transMapV5,848 improved chainGalGal3,1021 chainGalVar1,1036 chainHg19,1018 chainMm10,1018 chainMm39,1018 chainMonDom4,1018 chainNetGalGal3,1024 chainNetGalVar1,1039 chainNetHg19,1021 chainNetMm10,1020 chainNetMm39,1021 chainNetMonDom4,1021 chainNetOryCun2,1021 chainNetRn6,1024 chainOryCun2,1018 chainRn6,1021 netGalGal3,1021 netGalVar1,1036 netHg19,1018 netMm10,1018 netMm39,1018 netMonDom4,1018 netOryCun2,1018 netRn6,1021 tRNAs,448 improves nscanGene,371 improving nscanGene,314 in HLTOGAannotvHg38v1,119 HLTOGAannotvHg38v1,124 HLTOGAannotvHg38v1,137 HLTOGAannotvHg38v1,173 HLTOGAannotvHg38v1,220 HLTOGAannotvHg38v1,242 augustusGene,101 blastHg18KG,29 chainGalGal3,32 chainGalGal3,97 chainGalGal3,118 chainGalGal3,150 chainGalGal3,157 chainGalGal3,172 chainGalGal3,191 chainGalGal3,194 chainGalGal3,234 chainGalGal3,255 chainGalGal3,302 chainGalGal3,336 chainGalGal3,366 chainGalGal3,378 chainGalGal3,387 chainGalGal3,405 chainGalGal3,410 chainGalGal3,419 chainGalGal3,431 chainGalGal3,445 chainGalGal3,487 chainGalGal3,504 chainGalGal3,535 chainGalGal3,553 chainGalGal3,567 chainGalGal3,603 chainGalGal3,700 chainGalGal3,788 chainGalGal3,829 chainGalGal3,837 chainGalGal3,853 chainGalGal3,886 chainGalGal3,898 chainGalGal3,1068 chainGalVar1,35 chainGalVar1,101 chainGalVar1,124 chainGalVar1,156 chainGalVar1,165 chainGalVar1,180 chainGalVar1,199 chainGalVar1,202 chainGalVar1,242 chainGalVar1,263 chainGalVar1,314 chainGalVar1,347 chainGalVar1,377 chainGalVar1,389 chainGalVar1,398 chainGalVar1,416 chainGalVar1,421 chainGalVar1,430 chainGalVar1,442 chainGalVar1,456 chainGalVar1,498 chainGalVar1,515 chainGalVar1,546 chainGalVar1,564 chainGalVar1,578 chainGalVar1,616 chainGalVar1,715 chainGalVar1,803 chainGalVar1,844 chainGalVar1,852 chainGalVar1,868 chainGalVar1,901 chainGalVar1,913 chainGalVar1,1083 chainHg19,31 chainHg19,95 chainHg19,116 chainHg19,148 chainHg19,155 chainHg19,170 chainHg19,189 chainHg19,192 chainHg19,232 chainHg19,253 chainHg19,300 chainHg19,333 chainHg19,363 chainHg19,375 chainHg19,384 chainHg19,402 chainHg19,407 chainHg19,416 chainHg19,428 chainHg19,442 chainHg19,484 chainHg19,501 chainHg19,532 chainHg19,550 chainHg19,564 chainHg19,600 chainHg19,697 chainHg19,785 chainHg19,826 chainHg19,834 chainHg19,850 chainHg19,883 chainHg19,895 chainHg19,1065 chainMm10,31 chainMm10,95 chainMm10,116 chainMm10,148 chainMm10,155 chainMm10,170 chainMm10,189 chainMm10,192 chainMm10,232 chainMm10,253 chainMm10,300 chainMm10,333 chainMm10,363 chainMm10,375 chainMm10,384 chainMm10,402 chainMm10,407 chainMm10,416 chainMm10,428 chainMm10,442 chainMm10,484 chainMm10,501 chainMm10,532 chainMm10,550 chainMm10,564 chainMm10,600 chainMm10,697 chainMm10,785 chainMm10,826 chainMm10,834 chainMm10,850 chainMm10,883 chainMm10,895 chainMm10,1065 chainMm39,31 chainMm39,95 chainMm39,116 chainMm39,148 chainMm39,155 chainMm39,170 chainMm39,189 chainMm39,192 chainMm39,232 chainMm39,253 chainMm39,300 chainMm39,333 chainMm39,363 chainMm39,375 chainMm39,384 chainMm39,402 chainMm39,407 chainMm39,416 chainMm39,428 chainMm39,442 chainMm39,484 chainMm39,501 chainMm39,532 chainMm39,550 chainMm39,564 chainMm39,600 chainMm39,697 chainMm39,785 chainMm39,826 chainMm39,834 chainMm39,850 chainMm39,883 chainMm39,895 chainMm39,1065 chainMonDom4,31 chainMonDom4,95 chainMonDom4,116 chainMonDom4,148 chainMonDom4,155 chainMonDom4,170 chainMonDom4,189 chainMonDom4,192 chainMonDom4,232 chainMonDom4,253 chainMonDom4,300 chainMonDom4,333 chainMonDom4,363 chainMonDom4,375 chainMonDom4,384 chainMonDom4,402 chainMonDom4,407 chainMonDom4,416 chainMonDom4,428 chainMonDom4,442 chainMonDom4,484 chainMonDom4,501 chainMonDom4,532 chainMonDom4,550 chainMonDom4,564 chainMonDom4,600 chainMonDom4,697 chainMonDom4,785 chainMonDom4,826 chainMonDom4,834 chainMonDom4,850 chainMonDom4,883 chainMonDom4,895 chainMonDom4,1065 chainNetGalGal3,35 chainNetGalGal3,100 chainNetGalGal3,121 chainNetGalGal3,153 chainNetGalGal3,160 chainNetGalGal3,175 chainNetGalGal3,194 chainNetGalGal3,197 chainNetGalGal3,237 chainNetGalGal3,258 chainNetGalGal3,305 chainNetGalGal3,339 chainNetGalGal3,369 chainNetGalGal3,381 chainNetGalGal3,390 chainNetGalGal3,408 chainNetGalGal3,413 chainNetGalGal3,422 chainNetGalGal3,434 chainNetGalGal3,448 chainNetGalGal3,490 chainNetGalGal3,507 chainNetGalGal3,538 chainNetGalGal3,556 chainNetGalGal3,570 chainNetGalGal3,606 chainNetGalGal3,703 chainNetGalGal3,791 chainNetGalGal3,832 chainNetGalGal3,840 chainNetGalGal3,856 chainNetGalGal3,889 chainNetGalGal3,901 chainNetGalGal3,1071 chainNetGalVar1,38 chainNetGalVar1,104 chainNetGalVar1,127 chainNetGalVar1,159 chainNetGalVar1,168 chainNetGalVar1,183 chainNetGalVar1,202 chainNetGalVar1,205 chainNetGalVar1,245 chainNetGalVar1,266 chainNetGalVar1,317 chainNetGalVar1,350 chainNetGalVar1,380 chainNetGalVar1,392 chainNetGalVar1,401 chainNetGalVar1,419 chainNetGalVar1,424 chainNetGalVar1,433 chainNetGalVar1,445 chainNetGalVar1,459 chainNetGalVar1,501 chainNetGalVar1,518 chainNetGalVar1,549 chainNetGalVar1,567 chainNetGalVar1,581 chainNetGalVar1,619 chainNetGalVar1,718 chainNetGalVar1,806 chainNetGalVar1,847 chainNetGalVar1,855 chainNetGalVar1,871 chainNetGalVar1,904 chainNetGalVar1,916 chainNetGalVar1,1086 chainNetHg19,34 chainNetHg19,98 chainNetHg19,119 chainNetHg19,151 chainNetHg19,158 chainNetHg19,173 chainNetHg19,192 chainNetHg19,195 chainNetHg19,235 chainNetHg19,256 chainNetHg19,303 chainNetHg19,336 chainNetHg19,366 chainNetHg19,378 chainNetHg19,387 chainNetHg19,405 chainNetHg19,410 chainNetHg19,419 chainNetHg19,431 chainNetHg19,445 chainNetHg19,487 chainNetHg19,504 chainNetHg19,535 chainNetHg19,553 chainNetHg19,567 chainNetHg19,603 chainNetHg19,700 chainNetHg19,788 chainNetHg19,829 chainNetHg19,837 chainNetHg19,853 chainNetHg19,886 chainNetHg19,898 chainNetHg19,1068 chainNetMm10,33 chainNetMm10,97 chainNetMm10,118 chainNetMm10,150 chainNetMm10,157 chainNetMm10,172 chainNetMm10,191 chainNetMm10,194 chainNetMm10,234 chainNetMm10,255 chainNetMm10,302 chainNetMm10,335 chainNetMm10,365 chainNetMm10,377 chainNetMm10,386 chainNetMm10,404 chainNetMm10,409 chainNetMm10,418 chainNetMm10,430 chainNetMm10,444 chainNetMm10,486 chainNetMm10,503 chainNetMm10,534 chainNetMm10,552 chainNetMm10,566 chainNetMm10,602 chainNetMm10,699 chainNetMm10,787 chainNetMm10,828 chainNetMm10,836 chainNetMm10,852 chainNetMm10,885 chainNetMm10,897 chainNetMm10,1067 chainNetMm39,34 chainNetMm39,98 chainNetMm39,119 chainNetMm39,151 chainNetMm39,158 chainNetMm39,173 chainNetMm39,192 chainNetMm39,195 chainNetMm39,235 chainNetMm39,256 chainNetMm39,303 chainNetMm39,336 chainNetMm39,366 chainNetMm39,378 chainNetMm39,387 chainNetMm39,405 chainNetMm39,410 chainNetMm39,419 chainNetMm39,431 chainNetMm39,445 chainNetMm39,487 chainNetMm39,504 chainNetMm39,535 chainNetMm39,553 chainNetMm39,567 chainNetMm39,603 chainNetMm39,700 chainNetMm39,788 chainNetMm39,829 chainNetMm39,837 chainNetMm39,853 chainNetMm39,886 chainNetMm39,898 chainNetMm39,1068 chainNetMonDom4,34 chainNetMonDom4,98 chainNetMonDom4,119 chainNetMonDom4,151 chainNetMonDom4,158 chainNetMonDom4,173 chainNetMonDom4,192 chainNetMonDom4,195 chainNetMonDom4,235 chainNetMonDom4,256 chainNetMonDom4,303 chainNetMonDom4,336 chainNetMonDom4,366 chainNetMonDom4,378 chainNetMonDom4,387 chainNetMonDom4,405 chainNetMonDom4,410 chainNetMonDom4,419 chainNetMonDom4,431 chainNetMonDom4,445 chainNetMonDom4,487 chainNetMonDom4,504 chainNetMonDom4,535 chainNetMonDom4,553 chainNetMonDom4,567 chainNetMonDom4,603 chainNetMonDom4,700 chainNetMonDom4,788 chainNetMonDom4,829 chainNetMonDom4,837 chainNetMonDom4,853 chainNetMonDom4,886 chainNetMonDom4,898 chainNetMonDom4,1068 chainNetOryCun2,34 chainNetOryCun2,98 chainNetOryCun2,119 chainNetOryCun2,151 chainNetOryCun2,158 chainNetOryCun2,173 chainNetOryCun2,192 chainNetOryCun2,195 chainNetOryCun2,235 chainNetOryCun2,256 chainNetOryCun2,303 chainNetOryCun2,336 chainNetOryCun2,366 chainNetOryCun2,378 chainNetOryCun2,387 chainNetOryCun2,405 chainNetOryCun2,410 chainNetOryCun2,419 chainNetOryCun2,431 chainNetOryCun2,445 chainNetOryCun2,487 chainNetOryCun2,504 chainNetOryCun2,535 chainNetOryCun2,553 chainNetOryCun2,567 chainNetOryCun2,603 chainNetOryCun2,700 chainNetOryCun2,788 chainNetOryCun2,829 chainNetOryCun2,837 chainNetOryCun2,853 chainNetOryCun2,886 chainNetOryCun2,898 chainNetOryCun2,1068 chainNetRn6,35 chainNetRn6,100 chainNetRn6,121 chainNetRn6,153 chainNetRn6,160 chainNetRn6,175 chainNetRn6,194 chainNetRn6,197 chainNetRn6,237 chainNetRn6,258 chainNetRn6,305 chainNetRn6,339 chainNetRn6,369 chainNetRn6,381 chainNetRn6,390 chainNetRn6,408 chainNetRn6,413 chainNetRn6,422 chainNetRn6,434 chainNetRn6,448 chainNetRn6,490 chainNetRn6,507 chainNetRn6,538 chainNetRn6,556 chainNetRn6,570 chainNetRn6,606 chainNetRn6,703 chainNetRn6,791 chainNetRn6,832 chainNetRn6,840 chainNetRn6,856 chainNetRn6,889 chainNetRn6,901 chainNetRn6,1071 chainOryCun2,31 chainOryCun2,95 chainOryCun2,116 chainOryCun2,148 chainOryCun2,155 chainOryCun2,170 chainOryCun2,189 chainOryCun2,192 chainOryCun2,232 chainOryCun2,253 chainOryCun2,300 chainOryCun2,333 chainOryCun2,363 chainOryCun2,375 chainOryCun2,384 chainOryCun2,402 chainOryCun2,407 chainOryCun2,416 chainOryCun2,428 chainOryCun2,442 chainOryCun2,484 chainOryCun2,501 chainOryCun2,532 chainOryCun2,550 chainOryCun2,564 chainOryCun2,600 chainOryCun2,697 chainOryCun2,785 chainOryCun2,826 chainOryCun2,834 chainOryCun2,850 chainOryCun2,883 chainOryCun2,895 chainOryCun2,1065 chainRn6,32 chainRn6,97 chainRn6,118 chainRn6,150 chainRn6,157 chainRn6,172 chainRn6,191 chainRn6,194 chainRn6,234 chainRn6,255 chainRn6,302 chainRn6,336 chainRn6,366 chainRn6,378 chainRn6,387 chainRn6,405 chainRn6,410 chainRn6,419 chainRn6,431 chainRn6,445 chainRn6,487 chainRn6,504 chainRn6,535 chainRn6,553 chainRn6,567 chainRn6,603 chainRn6,700 chainRn6,788 chainRn6,829 chainRn6,837 chainRn6,853 chainRn6,886 chainRn6,898 chainRn6,1068 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ensGene,37 ensGene,50 ensGene,83 ensGene,90 ensGene,95 est,24 est,37 est,60 est,151 est,172 est,195 est,205 est,223 est,276 est,398 est,531 est,579 est,689 gap,12 gap,41 gap,111 gap,114 gc5Base,5 gc5Base,26 gc5Base,43 genscan,101 genscan,150 genscan,162 genscan,165 genscan,184 genscan,188 genscan,198 genscan,216 gold,57 gold,118 intronEst,25 intronEst,48 intronEst,86 intronEst,100 intronEst,144 intronEst,232 intronEst,253 intronEst,276 intronEst,286 intronEst,304 intronEst,357 intronEst,479 intronEst,612 intronEst,660 intronEst,770 intronEst,806 microsat,42 microsat,49 mrna,22 mrna,41 mrna,97 mrna,118 mrna,141 mrna,151 mrna,169 mrna,222 mrna,405 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netGalGal3,32 netGalGal3,97 netGalGal3,118 netGalGal3,150 netGalGal3,157 netGalGal3,172 netGalGal3,191 netGalGal3,194 netGalGal3,234 netGalGal3,255 netGalGal3,302 netGalGal3,336 netGalGal3,366 netGalGal3,378 netGalGal3,387 netGalGal3,405 netGalGal3,410 netGalGal3,419 netGalGal3,431 netGalGal3,445 netGalGal3,487 netGalGal3,504 netGalGal3,535 netGalGal3,553 netGalGal3,567 netGalGal3,603 netGalGal3,700 netGalGal3,788 netGalGal3,829 netGalGal3,837 netGalGal3,853 netGalGal3,886 netGalGal3,898 netGalGal3,1068 netGalVar1,35 netGalVar1,101 netGalVar1,124 netGalVar1,156 netGalVar1,165 netGalVar1,180 netGalVar1,199 netGalVar1,202 netGalVar1,242 netGalVar1,263 netGalVar1,314 netGalVar1,347 netGalVar1,377 netGalVar1,389 netGalVar1,398 netGalVar1,416 netGalVar1,421 netGalVar1,430 netGalVar1,442 netGalVar1,456 netGalVar1,498 netGalVar1,515 netGalVar1,546 netGalVar1,564 netGalVar1,578 netGalVar1,616 netGalVar1,715 netGalVar1,803 netGalVar1,844 netGalVar1,852 netGalVar1,868 netGalVar1,901 netGalVar1,913 netGalVar1,1083 netHg19,31 netHg19,95 netHg19,116 netHg19,148 netHg19,155 netHg19,170 netHg19,189 netHg19,192 netHg19,232 netHg19,253 netHg19,300 netHg19,333 netHg19,363 netHg19,375 netHg19,384 netHg19,402 netHg19,407 netHg19,416 netHg19,428 netHg19,442 netHg19,484 netHg19,501 netHg19,532 netHg19,550 netHg19,564 netHg19,600 netHg19,697 netHg19,785 netHg19,826 netHg19,834 netHg19,850 netHg19,883 netHg19,895 netHg19,1065 netMm10,31 netMm10,95 netMm10,116 netMm10,148 netMm10,155 netMm10,170 netMm10,189 netMm10,192 netMm10,232 netMm10,253 netMm10,300 netMm10,333 netMm10,363 netMm10,375 netMm10,384 netMm10,402 netMm10,407 netMm10,416 netMm10,428 netMm10,442 netMm10,484 netMm10,501 netMm10,532 netMm10,550 netMm10,564 netMm10,600 netMm10,697 netMm10,785 netMm10,826 netMm10,834 netMm10,850 netMm10,883 netMm10,895 netMm10,1065 netMm39,31 netMm39,95 netMm39,116 netMm39,148 netMm39,155 netMm39,170 netMm39,189 netMm39,192 netMm39,232 netMm39,253 netMm39,300 netMm39,333 netMm39,363 netMm39,375 netMm39,384 netMm39,402 netMm39,407 netMm39,416 netMm39,428 netMm39,442 netMm39,484 netMm39,501 netMm39,532 netMm39,550 netMm39,564 netMm39,600 netMm39,697 netMm39,785 netMm39,826 netMm39,834 netMm39,850 netMm39,883 netMm39,895 netMm39,1065 netMonDom4,31 netMonDom4,95 netMonDom4,116 netMonDom4,148 netMonDom4,155 netMonDom4,170 netMonDom4,189 netMonDom4,192 netMonDom4,232 netMonDom4,253 netMonDom4,300 netMonDom4,333 netMonDom4,363 netMonDom4,375 netMonDom4,384 netMonDom4,402 netMonDom4,407 netMonDom4,416 netMonDom4,428 netMonDom4,442 netMonDom4,484 netMonDom4,501 netMonDom4,532 netMonDom4,550 netMonDom4,564 netMonDom4,600 netMonDom4,697 netMonDom4,785 netMonDom4,826 netMonDom4,834 netMonDom4,850 netMonDom4,883 netMonDom4,895 netMonDom4,1065 netOryCun2,31 netOryCun2,95 netOryCun2,116 netOryCun2,148 netOryCun2,155 netOryCun2,170 netOryCun2,189 netOryCun2,192 netOryCun2,232 netOryCun2,253 netOryCun2,300 netOryCun2,333 netOryCun2,363 netOryCun2,375 netOryCun2,384 netOryCun2,402 netOryCun2,407 netOryCun2,416 netOryCun2,428 netOryCun2,442 netOryCun2,484 netOryCun2,501 netOryCun2,532 netOryCun2,550 netOryCun2,564 netOryCun2,600 netOryCun2,697 netOryCun2,785 netOryCun2,826 netOryCun2,834 netOryCun2,850 netOryCun2,883 netOryCun2,895 netOryCun2,1065 netRn6,32 netRn6,97 netRn6,118 netRn6,150 netRn6,157 netRn6,172 netRn6,191 netRn6,194 netRn6,234 netRn6,255 netRn6,302 netRn6,336 netRn6,366 netRn6,378 netRn6,387 netRn6,405 netRn6,410 netRn6,419 netRn6,431 netRn6,445 netRn6,487 netRn6,504 netRn6,535 netRn6,553 netRn6,567 netRn6,603 netRn6,700 netRn6,788 netRn6,829 netRn6,837 netRn6,853 netRn6,886 netRn6,898 netRn6,1068 nscanGene,31 nscanGene,43 nscanGene,127 nscanGene,140 nscanGene,152 nscanGene,253 nscanGene,266 quality,24 quality,59 refGene,283 refSeqComposite,62 refSeqComposite,278 refSeqComposite,397 refSeqComposite,760 refSeqComposite,992 refSeqComposite,1039 refSeqComposite,1066 refSeqComposite,1143 refSeqComposite,1169 refSeqComposite,1184 refSeqComposite,1254 refSeqComposite,1301 refSeqComposite,1345 refSeqComposite,1360 refSeqComposite,1369 refSeqComposite,1379 refSeqComposite,1389 refSeqComposite,1448 refSeqComposite,1457 refSeqComposite,1472 refSeqComposite,1480 refSeqComposite,1540 refSeqComposite,1625 refSeqComposite,1662 refSeqComposite,1668 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 tRNAs,155 tRNAs,158 tRNAs,194 tRNAs,203 tRNAs,222 tRNAs,240 tRNAs,249 tRNAs,378 tRNAs,425 tRNAs,454 tRNAs,486 transMapEnsemblV5,33 transMapEnsemblV5,82 transMapEnsemblV5,89 transMapEnsemblV5,161 transMapEnsemblV5,338 transMapEnsemblV5,362 transMapEnsemblV5,370 transMapEnsemblV5,405 transMapEnsemblV5,415 transMapEnsemblV5,449 transMapEnsemblV5,495 transMapEnsemblV5,545 transMapEnsemblV5,587 transMapEstV5,31 transMapEstV5,51 transMapEstV5,58 transMapEstV5,130 transMapEstV5,307 transMapEstV5,331 transMapEstV5,339 transMapEstV5,374 transMapEstV5,384 transMapEstV5,418 transMapEstV5,464 transMapEstV5,514 transMapEstV5,556 transMapRefSeqV5,31 transMapRefSeqV5,51 transMapRefSeqV5,58 transMapRefSeqV5,130 transMapRefSeqV5,307 transMapRefSeqV5,331 transMapRefSeqV5,339 transMapRefSeqV5,374 transMapRefSeqV5,384 transMapRefSeqV5,418 transMapRefSeqV5,464 transMapRefSeqV5,514 transMapRefSeqV5,556 transMapRnaV5,31 transMapRnaV5,51 transMapRnaV5,58 transMapRnaV5,130 transMapRnaV5,307 transMapRnaV5,331 transMapRnaV5,339 transMapRnaV5,374 transMapRnaV5,384 transMapRnaV5,418 transMapRnaV5,464 transMapRnaV5,514 transMapRnaV5,556 transMapV5,30 transMapV5,52 transMapV5,59 transMapV5,77 transMapV5,236 transMapV5,413 transMapV5,437 transMapV5,445 transMapV5,480 transMapV5,490 transMapV5,524 transMapV5,570 transMapV5,620 transMapV5,662 uniprot,67 uniprot,148 uniprot,161 uniprot,177 uniprot,242 uniprot,291 uniprot,313 uniprot,427 uniprot,505 uniprot,509 uniprot,570 uniprot,581 uniprot,586 uniprot,591 uniprot,737 uniprot,755 uniprot,854 uniprot,870 uniprot,882 uniprot,1066 uniprot,1132 uniprot,1151 uniprot,1171 uniprot,1190 uniprot,1199 uniprot,1252 uniprot,1258 uniprot,1272 uniprot,1466 uniprot,1637 uniprot,1663 uniprot,1734 uniprot,1752 uniprot,1849 uniprot,1864 windowmaskerSdust,27 xenoMrna,23 xenoMrna,45 xenoMrna,68 xenoMrna,171 xenoMrna,192 xenoMrna,215 xenoMrna,225 xenoMrna,243 xenoMrna,296 xenoMrna,478 xenoRefGene,244 inactivating HLTOGAannotvHg38v1,185 HLTOGAannotvHg38v1,232 HLTOGAannotvHg38v1,240 HLTOGAannotvHg38v1,275 HLTOGAannotvHg38v1,305 include est,133 est,338 est,362 intronEst,214 intronEst,419 intronEst,443 mrna,79 mrna,284 mrna,308 refSeqComposite,188 rmsk,159 rmsk,172 xenoMrna,153 xenoMrna,358 xenoMrna,382 included augustusGene,160 blastHg18KG,115 blastHg18KG,138 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 windowmaskerSdust,26 includes refSeqComposite,217 refSeqComposite,263 refSeqComposite,347 refSeqComposite,652 rmsk,198 uniprot,1587 including est,7 intronEst,122 refSeqComposite,799 rmsk,188 uniprot,1700 inclusion refSeqComposite,396 inconsistency refSeqComposite,877 incorporate refSeqComposite,664 incorrect uniprot,1361 indels microsat,74 independently refSeqComposite,294 indexing refSeqComposite,1467 indicate chainGalGal3,141 chainGalGal3,249 chainGalVar1,147 chainGalVar1,257 chainHg19,139 chainHg19,247 chainMm10,139 chainMm10,247 chainMm39,139 chainMm39,247 chainMonDom4,139 chainMonDom4,247 chainNetGalGal3,144 chainNetGalGal3,252 chainNetGalVar1,150 chainNetGalVar1,260 chainNetHg19,142 chainNetHg19,250 chainNetMm10,141 chainNetMm10,249 chainNetMm39,142 chainNetMm39,250 chainNetMonDom4,142 chainNetMonDom4,250 chainNetOryCun2,142 chainNetOryCun2,250 chainNetRn6,144 chainNetRn6,252 chainOryCun2,139 chainOryCun2,247 chainRn6,141 chainRn6,249 est,71 mrna,52 nestedRepeats,153 netGalGal3,141 netGalGal3,249 netGalVar1,147 netGalVar1,257 netHg19,139 netHg19,247 netMm10,139 netMm10,247 netMm39,139 netMm39,247 netMonDom4,139 netMonDom4,247 netOryCun2,139 netOryCun2,247 netRn6,141 netRn6,249 tRNAs,137 tRNAs,187 xenoMrna,56 indicates est,79 intronEst,150 intronEst,160 quality,35 refGene,99 refSeqComposite,609 xenoMrna,73 xenoMrna,95 xenoRefGene,60 individual chainGalGal3,246 chainGalGal3,502 chainGalVar1,254 chainGalVar1,513 chainHg19,244 chainHg19,499 chainMm10,244 chainMm10,499 chainMm39,244 chainMm39,499 chainMonDom4,244 chainMonDom4,499 chainNetGalGal3,249 chainNetGalGal3,505 chainNetGalVar1,257 chainNetGalVar1,516 chainNetHg19,247 chainNetHg19,502 chainNetMm10,246 chainNetMm10,501 chainNetMm39,247 chainNetMm39,502 chainNetMonDom4,247 chainNetMonDom4,502 chainNetOryCun2,247 chainNetOryCun2,502 chainNetRn6,249 chainNetRn6,505 chainOryCun2,244 chainOryCun2,499 chainRn6,246 chainRn6,502 netGalGal3,246 netGalGal3,502 netGalVar1,254 netGalVar1,513 netHg19,244 netHg19,499 netMm10,244 netMm10,499 netMm39,244 netMm39,499 netMonDom4,244 netMonDom4,499 netOryCun2,244 netOryCun2,499 netRn6,246 netRn6,502 refSeqComposite,680 refSeqComposite,705 refSeqComposite,749 refSeqComposite,1495 transMapEnsemblV5,603 transMapEstV5,572 transMapRefSeqV5,572 transMapRnaV5,572 transMapV5,678 infer HLTOGAannotvHg38v1,19 inference HLTOGAannotvHg38v1,361 inferring HLTOGAannotvHg38v1,32 informant nscanGene,75 nscanGene,113 information HLTOGAannotvHg38v1,300 augustusGene,36 blastHg18KG,151 chainGalGal3,465 chainGalGal3,478 chainGalGal3,484 chainGalGal3,854 chainGalVar1,476 chainGalVar1,489 chainGalVar1,495 chainGalVar1,869 chainHg19,462 chainHg19,475 chainHg19,481 chainHg19,851 chainMm10,462 chainMm10,475 chainMm10,481 chainMm10,851 chainMm39,462 chainMm39,475 chainMm39,481 chainMm39,851 chainMonDom4,462 chainMonDom4,475 chainMonDom4,481 chainMonDom4,851 chainNetGalGal3,468 chainNetGalGal3,481 chainNetGalGal3,487 chainNetGalGal3,857 chainNetGalVar1,479 chainNetGalVar1,492 chainNetGalVar1,498 chainNetGalVar1,872 chainNetHg19,465 chainNetHg19,478 chainNetHg19,484 chainNetHg19,854 chainNetMm10,464 chainNetMm10,477 chainNetMm10,483 chainNetMm10,853 chainNetMm39,465 chainNetMm39,478 chainNetMm39,484 chainNetMm39,854 chainNetMonDom4,465 chainNetMonDom4,478 chainNetMonDom4,484 chainNetMonDom4,854 chainNetOryCun2,465 chainNetOryCun2,478 chainNetOryCun2,484 chainNetOryCun2,854 chainNetRn6,468 chainNetRn6,481 chainNetRn6,487 chainNetRn6,857 chainOryCun2,462 chainOryCun2,475 chainOryCun2,481 chainOryCun2,851 chainRn6,465 chainRn6,478 chainRn6,484 chainRn6,854 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 ensGene,19 ensGene,159 est,78 est,413 est,437 gc5Base,55 genscan,51 genscan,126 intronEst,159 intronEst,494 intronEst,518 microsat,97 mrna,350 mrna,376 nestedRepeats,53 nestedRepeats,301 netGalGal3,465 netGalGal3,478 netGalGal3,484 netGalGal3,854 netGalVar1,476 netGalVar1,489 netGalVar1,495 netGalVar1,869 netHg19,462 netHg19,475 netHg19,481 netHg19,851 netMm10,462 netMm10,475 netMm10,481 netMm10,851 netMm39,462 netMm39,475 netMm39,481 netMm39,851 netMonDom4,462 netMonDom4,475 netMonDom4,481 netMonDom4,851 netOryCun2,462 netOryCun2,475 netOryCun2,481 netOryCun2,851 netRn6,465 netRn6,478 netRn6,484 netRn6,854 nscanGene,50 quality,71 refGene,72 refGene,216 refSeqComposite,131 refSeqComposite,669 refSeqComposite,853 refSeqComposite,1188 refSeqComposite,1384 refSeqComposite,1388 rmsk,89 rmsk,324 simpleRepeat,58 transMapEnsemblV5,132 transMapEnsemblV5,149 transMapEnsemblV5,569 transMapEstV5,101 transMapEstV5,118 transMapEstV5,538 transMapRefSeqV5,101 transMapRefSeqV5,118 transMapRefSeqV5,538 transMapRnaV5,101 transMapRnaV5,118 transMapRnaV5,538 transMapV5,207 transMapV5,224 transMapV5,644 uniprot,678 uniprot,1842 uniprot,2038 xenoMrna,63 xenoMrna,424 xenoMrna,450 xenoRefGene,177 initial refSeqComposite,683 tRNAs,47 initiate rmsk,316 initio augustusGene,4 augustusGene,17 input HLTOGAannotvHg38v1,43 uniprot,1952 windowmaskerSdust,61 windowmaskerSdust,70 inserted chainGalGal3,578 chainGalGal3,910 chainGalVar1,589 chainGalVar1,925 chainHg19,575 chainHg19,907 chainMm10,575 chainMm10,907 chainMm39,575 chainMm39,907 chainMonDom4,575 chainMonDom4,907 chainNetGalGal3,581 chainNetGalGal3,913 chainNetGalVar1,592 chainNetGalVar1,928 chainNetHg19,578 chainNetHg19,910 chainNetMm10,577 chainNetMm10,909 chainNetMm39,578 chainNetMm39,910 chainNetMonDom4,578 chainNetMonDom4,910 chainNetOryCun2,578 chainNetOryCun2,910 chainNetRn6,581 chainNetRn6,913 chainOryCun2,575 chainOryCun2,907 chainRn6,578 chainRn6,910 netGalGal3,578 netGalGal3,910 netGalVar1,589 netGalVar1,925 netHg19,575 netHg19,907 netMm10,575 netMm10,907 netMm39,575 netMm39,907 netMonDom4,575 netMonDom4,907 netOryCun2,575 netOryCun2,907 netRn6,578 netRn6,910 insertion chainGalGal3,156 chainGalVar1,164 chainHg19,154 chainMm10,154 chainMm39,154 chainMonDom4,154 chainNetGalGal3,159 chainNetGalVar1,167 chainNetHg19,157 chainNetMm10,156 chainNetMm39,157 chainNetMonDom4,157 chainNetOryCun2,157 chainNetRn6,159 chainOryCun2,154 chainRn6,156 est,442 intronEst,523 mrna,381 netGalGal3,156 netGalVar1,164 netHg19,154 netMm10,154 netMm39,154 netMonDom4,154 netOryCun2,154 netRn6,156 rmsk,223 xenoMrna,455 insertions nestedRepeats,86 nestedRepeats,92 nscanGene,98 refSeqComposite,949 inside uniprot,560 inspected tRNAs,228 inspection uniprot,1653 instead nscanGene,188 refGene,159 refSeqComposite,786 xenoRefGene,120 institute nestedRepeats,55 rmsk,91 instructions ensGene,117 transMapEnsemblV5,634 transMapEstV5,603 transMapRefSeqV5,603 transMapRnaV5,603 transMapV5,709 uniprot,1785 intact HLTOGAannotvHg38v1,38 HLTOGAannotvHg38v1,143 HLTOGAannotvHg38v1,166 integrated tRNAs,27 integrates HLTOGAannotvHg38v1,29 integrating HLTOGAannotvHg38v1,356 nscanGene,345 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 ensGene,71 refSeqComposite,1317 transMapEnsemblV5,537 transMapEstV5,506 transMapRefSeqV5,506 transMapRnaV5,506 transMapV5,612 uniprot,1725 interactions uniprot,316 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 ensGene,63 refSeqComposite,1308 transMapEnsemblV5,529 transMapEstV5,498 transMapRefSeqV5,498 transMapRnaV5,498 transMapV5,604 uniprot,1717 interest unipInterest,1 unipInterest,5 uniprot,299 intergenic HLTOGAannotvHg38v1,84 genscan,47 international est,739 intronEst,823 mrna,456 transMapEnsemblV5,695 transMapEstV5,664 transMapRefSeqV5,664 transMapRnaV5,664 transMapV5,770 xenoMrna,530 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 intervals windowmaskerSdust,4 into chainGalGal3,609 chainGalGal3,621 chainGalGal3,638 chainGalGal3,813 chainGalVar1,622 chainGalVar1,634 chainGalVar1,653 chainGalVar1,828 chainHg19,606 chainHg19,618 chainHg19,635 chainHg19,810 chainMm10,606 chainMm10,618 chainMm10,635 chainMm10,810 chainMm39,606 chainMm39,618 chainMm39,635 chainMm39,810 chainMonDom4,606 chainMonDom4,618 chainMonDom4,635 chainMonDom4,810 chainNetGalGal3,612 chainNetGalGal3,624 chainNetGalGal3,641 chainNetGalGal3,816 chainNetGalVar1,625 chainNetGalVar1,637 chainNetGalVar1,656 chainNetGalVar1,831 chainNetHg19,609 chainNetHg19,621 chainNetHg19,638 chainNetHg19,813 chainNetMm10,608 chainNetMm10,620 chainNetMm10,637 chainNetMm10,812 chainNetMm39,609 chainNetMm39,621 chainNetMm39,638 chainNetMm39,813 chainNetMonDom4,609 chainNetMonDom4,621 chainNetMonDom4,638 chainNetMonDom4,813 chainNetOryCun2,609 chainNetOryCun2,621 chainNetOryCun2,638 chainNetOryCun2,813 chainNetRn6,612 chainNetRn6,624 chainNetRn6,641 chainNetRn6,816 chainOryCun2,606 chainOryCun2,618 chainOryCun2,635 chainOryCun2,810 chainRn6,609 chainRn6,621 chainRn6,638 chainRn6,813 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 est,255 est,460 est,467 est,612 gold,25 gold,32 intronEst,336 intronEst,541 intronEst,548 intronEst,693 mrna,201 netGalGal3,609 netGalGal3,621 netGalGal3,638 netGalGal3,813 netGalVar1,622 netGalVar1,634 netGalVar1,653 netGalVar1,828 netHg19,606 netHg19,618 netHg19,635 netHg19,810 netMm10,606 netMm10,618 netMm10,635 netMm10,810 netMm39,606 netMm39,618 netMm39,635 netMm39,810 netMonDom4,606 netMonDom4,618 netMonDom4,635 netMonDom4,810 netOryCun2,606 netOryCun2,618 netOryCun2,635 netOryCun2,810 netRn6,609 netRn6,621 netRn6,638 netRn6,813 nscanGene,119 nscanGene,348 tRNAs,309 uniprot,57 windowmaskerSdust,80 xenoMrna,275 intractable gap,24 intron augustusGene,88 augustusGene,330 est,662 intronEst,71 intronEst,743 intronic HLTOGAannotvHg38v1,82 introns chainGalGal3,57 chainGalVar1,60 chainHg19,56 chainMm10,56 chainMm39,56 chainMonDom4,56 chainNetGalGal3,60 chainNetGalVar1,63 chainNetHg19,59 chainNetMm10,58 chainNetMm39,59 chainNetMonDom4,59 chainNetOryCun2,59 chainNetRn6,60 chainOryCun2,56 chainRn6,57 est,679 genscan,45 intronEst,760 netGalGal3,57 netGalVar1,60 netHg19,56 netMm10,56 netMm39,56 netMonDom4,56 netOryCun2,56 netRn6,57 nscanGene,142 refSeqComposite,940 refSeqComposite,1031 inv chainGalGal3,540 chainGalVar1,551 chainHg19,537 chainMm10,537 chainMm39,537 chainMonDom4,537 chainNetGalGal3,543 chainNetGalVar1,554 chainNetHg19,540 chainNetMm10,539 chainNetMm39,540 chainNetMonDom4,540 chainNetOryCun2,540 chainNetRn6,543 chainOryCun2,537 chainRn6,540 netGalGal3,540 netGalVar1,551 netHg19,537 netMm10,537 netMm39,537 netMonDom4,537 netOryCun2,537 netRn6,540 invalid nscanGene,204 inversions chainGalGal3,114 chainGalGal3,179 chainGalVar1,120 chainGalVar1,187 chainHg19,112 chainHg19,177 chainMm10,112 chainMm10,177 chainMm39,112 chainMm39,177 chainMonDom4,112 chainMonDom4,177 chainNetGalGal3,117 chainNetGalGal3,182 chainNetGalVar1,123 chainNetGalVar1,190 chainNetHg19,115 chainNetHg19,180 chainNetMm10,114 chainNetMm10,179 chainNetMm39,115 chainNetMm39,180 chainNetMonDom4,115 chainNetMonDom4,180 chainNetOryCun2,115 chainNetOryCun2,180 chainNetRn6,117 chainNetRn6,182 chainOryCun2,112 chainOryCun2,177 chainRn6,114 chainRn6,179 netGalGal3,114 netGalGal3,179 netGalVar1,120 netGalVar1,187 netHg19,112 netHg19,177 netMm10,112 netMm10,177 netMm39,112 netMm39,177 netMonDom4,112 netMonDom4,177 netOryCun2,112 netOryCun2,177 netRn6,114 netRn6,179 invertebrate xenoMrna,21 inverted chainGalGal3,872 chainGalVar1,887 chainHg19,869 chainMm10,869 chainMm39,869 chainMonDom4,869 chainNetGalGal3,875 chainNetGalVar1,890 chainNetHg19,872 chainNetMm10,871 chainNetMm39,872 chainNetMonDom4,872 chainNetOryCun2,872 chainNetRn6,875 chainOryCun2,869 chainRn6,872 netGalGal3,872 netGalVar1,887 netHg19,869 netMm10,869 netMm39,869 netMonDom4,869 netOryCun2,869 netRn6,872 invisible refSeqComposite,1038 refSeqComposite,1065 involve chainGalGal3,169 chainGalVar1,177 chainHg19,167 chainMm10,167 chainMm39,167 chainMonDom4,167 chainNetGalGal3,172 chainNetGalVar1,180 chainNetHg19,170 chainNetMm10,169 chainNetMm39,170 chainNetMonDom4,170 chainNetOryCun2,170 chainNetRn6,172 chainOryCun2,167 chainRn6,169 netGalGal3,169 netGalVar1,177 netHg19,167 netMm10,167 netMm39,167 netMonDom4,167 netOryCun2,167 netRn6,169 involved tRNAs,193 is HLTOGAannotvHg38v1,24 HLTOGAannotvHg38v1,104 HLTOGAannotvHg38v1,135 HLTOGAannotvHg38v1,151 HLTOGAannotvHg38v1,171 HLTOGAannotvHg38v1,197 HLTOGAannotvHg38v1,218 HLTOGAannotvHg38v1,238 HLTOGAannotvHg38v1,251 HLTOGAannotvHg38v1,281 HLTOGAannotvHg38v1,287 HLTOGAannotvHg38v1,328 blastHg18KG,141 chainGalGal3,285 chainGalGal3,305 chainGalGal3,485 chainGalVar1,295 chainGalVar1,317 chainGalVar1,496 chainHg19,283 chainHg19,303 chainHg19,482 chainMm10,283 chainMm10,303 chainMm10,482 chainMm39,283 chainMm39,303 chainMm39,482 chainMonDom4,283 chainMonDom4,303 chainMonDom4,482 chainNetGalGal3,288 chainNetGalGal3,308 chainNetGalGal3,488 chainNetGalVar1,298 chainNetGalVar1,320 chainNetGalVar1,499 chainNetHg19,286 chainNetHg19,306 chainNetHg19,485 chainNetMm10,285 chainNetMm10,305 chainNetMm10,484 chainNetMm39,286 chainNetMm39,306 chainNetMm39,485 chainNetMonDom4,286 chainNetMonDom4,306 chainNetMonDom4,485 chainNetOryCun2,286 chainNetOryCun2,306 chainNetOryCun2,485 chainNetRn6,288 chainNetRn6,308 chainNetRn6,488 chainOryCun2,283 chainOryCun2,303 chainOryCun2,482 chainRn6,285 chainRn6,305 chainRn6,485 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 est,295 est,311 est,347 est,364 est,453 est,465 est,474 est,494 est,623 est,667 gap,59 gap,66 gap,74 gap,119 gap,129 gc5Base,32 gold,110 gold,116 intronEst,104 intronEst,376 intronEst,392 intronEst,428 intronEst,445 intronEst,534 intronEst,546 intronEst,555 intronEst,575 intronEst,704 intronEst,748 microsat,88 mrna,241 mrna,257 mrna,293 mrna,310 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netGalGal3,285 netGalGal3,305 netGalGal3,485 netGalVar1,295 netGalVar1,317 netGalVar1,496 netHg19,283 netHg19,303 netHg19,482 netMm10,283 netMm10,303 netMm10,482 netMm39,283 netMm39,303 netMm39,482 netMonDom4,283 netMonDom4,303 netMonDom4,482 netOryCun2,283 netOryCun2,303 netOryCun2,482 netRn6,285 netRn6,305 netRn6,485 nscanGene,157 refSeqComposite,147 refSeqComposite,243 refSeqComposite,317 refSeqComposite,537 refSeqComposite,567 refSeqComposite,578 refSeqComposite,714 refSeqComposite,1059 refSeqComposite,1202 refSeqComposite,1217 refSeqComposite,1434 refSeqComposite,1440 rmsk,95 rmsk,360 simpleRepeat,28 tRNAs,25 tRNAs,125 transMapEnsemblV5,39 transMapEnsemblV5,277 transMapEnsemblV5,421 transMapEnsemblV5,425 transMapEnsemblV5,437 transMapEnsemblV5,483 transMapEstV5,246 transMapEstV5,390 transMapEstV5,394 transMapEstV5,406 transMapEstV5,452 transMapRefSeqV5,246 transMapRefSeqV5,390 transMapRefSeqV5,394 transMapRefSeqV5,406 transMapRefSeqV5,452 transMapRnaV5,246 transMapRnaV5,390 transMapRnaV5,394 transMapRnaV5,406 transMapRnaV5,452 transMapV5,352 transMapV5,496 transMapV5,500 transMapV5,512 transMapV5,558 uniprot,159 uniprot,222 uniprot,417 uniprot,626 uniprot,707 uniprot,839 uniprot,911 uniprot,958 uniprot,972 uniprot,1052 uniprot,1081 uniprot,1209 uniprot,1245 uniprot,1256 uniprot,1264 uniprot,1283 uniprot,1334 uniprot,1390 uniprot,1564 uniprot,1578 uniprot,1603 uniprot,1630 uniprot,1732 windowmaskerSdust,25 windowmaskerSdust,39 xenoMrna,67 xenoMrna,121 xenoMrna,127 xenoMrna,315 xenoMrna,331 xenoMrna,367 xenoMrna,384 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isoform unipAliSwissprot,13 uniprot,157 uniprot,186 uniprot,671 isoforms unipAliSwissprot,17 uniprot,145 uniprot,164 isolated est,454 intronEst,535 isotype tRNAs,248 issue est,769 est,795 intronEst,853 intronEst,879 mrna,486 mrna,512 refGene,396 refGene,430 refSeqComposite,1786 refSeqComposite,1820 tRNAs,388 uniprot,2004 xenoMrna,560 xenoMrna,586 xenoRefGene,356 xenoRefGene,390 it chainGalGal3,92 chainGalGal3,284 chainGalGal3,539 chainGalGal3,551 chainGalVar1,96 chainGalVar1,294 chainGalVar1,550 chainGalVar1,562 chainHg19,90 chainHg19,282 chainHg19,536 chainHg19,548 chainMm10,90 chainMm10,282 chainMm10,536 chainMm10,548 chainMm39,90 chainMm39,282 chainMm39,536 chainMm39,548 chainMonDom4,90 chainMonDom4,282 chainMonDom4,536 chainMonDom4,548 chainNetGalGal3,95 chainNetGalGal3,287 chainNetGalGal3,542 chainNetGalGal3,554 chainNetGalVar1,99 chainNetGalVar1,297 chainNetGalVar1,553 chainNetGalVar1,565 chainNetHg19,93 chainNetHg19,285 chainNetHg19,539 chainNetHg19,551 chainNetMm10,92 chainNetMm10,284 chainNetMm10,538 chainNetMm10,550 chainNetMm39,93 chainNetMm39,285 chainNetMm39,539 chainNetMm39,551 chainNetMonDom4,93 chainNetMonDom4,285 chainNetMonDom4,539 chainNetMonDom4,551 chainNetOryCun2,93 chainNetOryCun2,285 chainNetOryCun2,539 chainNetOryCun2,551 chainNetRn6,95 chainNetRn6,287 chainNetRn6,542 chainNetRn6,554 chainOryCun2,90 chainOryCun2,282 chainOryCun2,536 chainOryCun2,548 chainRn6,92 chainRn6,284 chainRn6,539 chainRn6,551 est,93 est,107 est,516 gap,65 genscan,143 intronEst,174 intronEst,188 intronEst,597 netGalGal3,92 netGalGal3,284 netGalGal3,539 netGalGal3,551 netGalVar1,96 netGalVar1,294 netGalVar1,550 netGalVar1,562 netHg19,90 netHg19,282 netHg19,536 netHg19,548 netMm10,90 netMm10,282 netMm10,536 netMm10,548 netMm39,90 netMm39,282 netMm39,536 netMm39,548 netMonDom4,90 netMonDom4,282 netMonDom4,536 netMonDom4,548 netOryCun2,90 netOryCun2,282 netOryCun2,536 netOryCun2,548 netRn6,92 netRn6,284 netRn6,539 netRn6,551 nscanGene,61 refSeqComposite,577 refSeqComposite,1304 uniprot,228 uniprot,625 uniprot,1586 item nestedRepeats,197 refGene,116 refSeqComposite,717 xenoRefGene,77 items chainGalGal3,503 chainGalVar1,514 chainHg19,500 chainMm10,500 chainMm39,500 chainMonDom4,500 chainNetGalGal3,506 chainNetGalVar1,517 chainNetHg19,503 chainNetMm10,502 chainNetMm39,503 chainNetMonDom4,503 chainNetOryCun2,503 chainNetRn6,506 chainOryCun2,500 chainRn6,503 est,65 est,138 est,148 est,342 intronEst,219 intronEst,229 intronEst,423 mrna,46 mrna,84 mrna,94 mrna,288 nestedRepeats,171 nestedRepeats,180 netGalGal3,503 netGalVar1,514 netHg19,500 netMm10,500 netMm39,500 netMonDom4,500 netOryCun2,500 netRn6,503 refGene,143 refSeqComposite,767 refSeqComposite,966 refSeqComposite,1667 xenoMrna,50 xenoMrna,158 xenoMrna,168 xenoMrna,362 xenoRefGene,104 iterative nscanGene,365 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 uniprot,230 uniprot,762 uniprot,1316 uniprot,1348 itself uniprot,715 j blastHg18KG,170 cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 ensGene,183 est,758 est,782 genscan,220 intronEst,842 intronEst,866 mrna,475 mrna,499 nestedRepeats,341 nscanGene,281 refGene,375 refSeqComposite,1765 rmsk,364 tRNAs,429 transMapEnsemblV5,788 transMapEstV5,757 transMapRefSeqV5,757 transMapRnaV5,757 transMapV5,863 xenoMrna,549 xenoMrna,573 xenoRefGene,335 jan chainGalGal3,1114 chainGalVar1,1129 chainHg19,1111 chainMm10,1111 chainMm39,1111 chainMonDom4,4 chainMonDom4,66 chainMonDom4,306 chainMonDom4,1111 chainNetGalGal3,1117 chainNetGalVar1,1132 chainNetHg19,1114 chainNetMm10,1113 chainNetMm39,1114 chainNetMonDom4,5 chainNetMonDom4,69 chainNetMonDom4,309 chainNetMonDom4,1114 chainNetMonDom4Viewchain,3 chainNetMonDom4Viewnet,3 chainNetOryCun2,1114 chainNetRn6,1117 chainOryCun2,1111 chainRn6,1114 ensGene,199 est,766 est,791 intronEst,850 intronEst,875 microsat,129 mrna,483 mrna,508 netGalGal3,1114 netGalVar1,1129 netHg19,1111 netMm10,1111 netMm39,1111 netMonDom4,4 netMonDom4,66 netMonDom4,306 netMonDom4,1111 netOryCun2,1111 netRn6,1114 refGene,393 refGene,426 refSeqComposite,1783 refSeqComposite,1816 simpleRepeat,89 tRNAs,385 uniprot,2001 windowmaskerSdust,108 xenoMrna,557 xenoMrna,582 xenoRefGene,353 xenoRefGene,386 jebb HLTOGAannotvHg38v1,340 jim blastHg18KG,183 blastHg18KG,196 chainGalGal3,970 chainGalGal3,997 chainGalGal3,1015 chainGalVar1,985 chainGalVar1,1012 chainGalVar1,1030 chainHg19,967 chainHg19,994 chainHg19,1012 chainMm10,967 chainMm10,994 chainMm10,1012 chainMm39,967 chainMm39,994 chainMm39,1012 chainMonDom4,967 chainMonDom4,994 chainMonDom4,1012 chainNetGalGal3,973 chainNetGalGal3,1000 chainNetGalGal3,1018 chainNetGalVar1,988 chainNetGalVar1,1015 chainNetGalVar1,1033 chainNetHg19,970 chainNetHg19,997 chainNetHg19,1015 chainNetMm10,969 chainNetMm10,996 chainNetMm10,1014 chainNetMm39,970 chainNetMm39,997 chainNetMm39,1015 chainNetMonDom4,970 chainNetMonDom4,997 chainNetMonDom4,1015 chainNetOryCun2,970 chainNetOryCun2,997 chainNetOryCun2,1015 chainNetRn6,973 chainNetRn6,1000 chainNetRn6,1018 chainOryCun2,967 chainOryCun2,994 chainOryCun2,1012 chainRn6,970 chainRn6,997 chainRn6,1015 netGalGal3,970 netGalGal3,997 netGalGal3,1015 netGalVar1,985 netGalVar1,1012 netGalVar1,1030 netHg19,967 netHg19,994 netHg19,1012 netMm10,967 netMm10,994 netMm10,1012 netMm39,967 netMm39,994 netMm39,1012 netMonDom4,967 netMonDom4,994 netMonDom4,1012 netOryCun2,967 netOryCun2,994 netOryCun2,1012 netRn6,970 netRn6,997 netRn6,1015 joined chainGalGal3,126 chainGalVar1,132 chainHg19,124 chainMm10,124 chainMm39,124 chainMonDom4,124 chainNetGalGal3,129 chainNetGalVar1,135 chainNetHg19,127 chainNetMm10,126 chainNetMm39,127 chainNetMonDom4,127 chainNetOryCun2,127 chainNetRn6,129 chainOryCun2,124 chainRn6,126 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netGalGal3,126 netGalVar1,132 netHg19,124 netMm10,124 netMm39,124 netMonDom4,124 netOryCun2,124 netRn6,126 journal nestedRepeats,349 rmsk,372 jr nscanGene,298 nscanGene,301 json refSeqComposite,1361 refSeqComposite,1365 jul chainNetRn6,5 chainNetRn6,70 chainNetRn6,311 chainNetRn6Viewchain,3 chainNetRn6Viewnet,3 chainRn6,4 chainRn6,67 chainRn6,308 cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 netRn6,4 netRn6,67 netRn6,308 jun chainGalVar1,8 chainGalVar1,72 chainGalVar1,320 chainMm39,4 chainMm39,66 chainMm39,306 chainNetGalVar1,9 chainNetGalVar1,75 chainNetGalVar1,323 chainNetGalVar1Viewchain,5 chainNetGalVar1Viewnet,5 chainNetMm39,5 chainNetMm39,69 chainNetMm39,309 chainNetMm39Viewchain,3 chainNetMm39Viewnet,3 netGalVar1,8 netGalVar1,72 netGalVar1,320 netMm39,4 netMm39,66 netMm39,306 tRNAs,408 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 jz transMapEnsemblV5,790 transMapEstV5,759 transMapRefSeqV5,759 transMapRnaV5,759 transMapV5,865 k augustusGene,268 est,752 intronEst,836 mrna,469 xenoMrna,543 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,148 genscan,209 karsch-mizrachi est,753 est,777 intronEst,837 intronEst,861 mrna,470 mrna,494 xenoMrna,544 xenoMrna,568 kasif genscan,193 kd refGene,361 refGene,403 refSeqComposite,1751 refSeqComposite,1793 xenoRefGene,321 xenoRefGene,363 kd-tree chainGalGal3,644 chainGalVar1,659 chainHg19,641 chainMm10,641 chainMm39,641 chainMonDom4,641 chainNetGalGal3,647 chainNetGalVar1,662 chainNetHg19,644 chainNetMm10,643 chainNetMm39,644 chainNetMonDom4,644 chainNetOryCun2,644 chainNetRn6,647 chainOryCun2,641 chainRn6,644 netGalGal3,644 netGalVar1,659 netHg19,641 netMm10,641 netMm39,641 netMonDom4,641 netOryCun2,641 netRn6,644 kd-trees chainGalGal3,662 chainGalVar1,677 chainHg19,659 chainMm10,659 chainMm39,659 chainMonDom4,659 chainNetGalGal3,665 chainNetGalVar1,680 chainNetHg19,662 chainNetMm10,661 chainNetMm39,662 chainNetMonDom4,662 chainNetOryCun2,662 chainNetRn6,665 chainOryCun2,659 chainRn6,662 netGalGal3,662 netGalVar1,677 netHg19,659 netMm10,659 netMm39,659 netMonDom4,659 netOryCun2,659 netRn6,662 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 uniprot,1486 kent blastHg18KG,184 blastHg18KG,197 chainGalGal3,971 chainGalGal3,998 chainGalGal3,1016 chainGalGal3,1051 chainGalGal3,1093 chainGalVar1,986 chainGalVar1,1013 chainGalVar1,1031 chainGalVar1,1066 chainGalVar1,1108 chainHg19,968 chainHg19,995 chainHg19,1013 chainHg19,1048 chainHg19,1090 chainMm10,968 chainMm10,995 chainMm10,1013 chainMm10,1048 chainMm10,1090 chainMm39,968 chainMm39,995 chainMm39,1013 chainMm39,1048 chainMm39,1090 chainMonDom4,968 chainMonDom4,995 chainMonDom4,1013 chainMonDom4,1048 chainMonDom4,1090 chainNetGalGal3,974 chainNetGalGal3,1001 chainNetGalGal3,1019 chainNetGalGal3,1054 chainNetGalGal3,1096 chainNetGalVar1,989 chainNetGalVar1,1016 chainNetGalVar1,1034 chainNetGalVar1,1069 chainNetGalVar1,1111 chainNetHg19,971 chainNetHg19,998 chainNetHg19,1016 chainNetHg19,1051 chainNetHg19,1093 chainNetMm10,970 chainNetMm10,997 chainNetMm10,1015 chainNetMm10,1050 chainNetMm10,1092 chainNetMm39,971 chainNetMm39,998 chainNetMm39,1016 chainNetMm39,1051 chainNetMm39,1093 chainNetMonDom4,971 chainNetMonDom4,998 chainNetMonDom4,1016 chainNetMonDom4,1051 chainNetMonDom4,1093 chainNetOryCun2,971 chainNetOryCun2,998 chainNetOryCun2,1016 chainNetOryCun2,1051 chainNetOryCun2,1093 chainNetRn6,974 chainNetRn6,1001 chainNetRn6,1019 chainNetRn6,1054 chainNetRn6,1096 chainOryCun2,968 chainOryCun2,995 chainOryCun2,1013 chainOryCun2,1048 chainOryCun2,1090 chainRn6,971 chainRn6,998 chainRn6,1016 chainRn6,1051 chainRn6,1093 est,801 intronEst,885 mrna,518 netGalGal3,971 netGalGal3,998 netGalGal3,1016 netGalGal3,1051 netGalGal3,1093 netGalVar1,986 netGalVar1,1013 netGalVar1,1031 netGalVar1,1066 netGalVar1,1108 netHg19,968 netHg19,995 netHg19,1013 netHg19,1048 netHg19,1090 netMm10,968 netMm10,995 netMm10,1013 netMm10,1048 netMm10,1090 netMm39,968 netMm39,995 netMm39,1013 netMm39,1048 netMm39,1090 netMonDom4,968 netMonDom4,995 netMonDom4,1013 netMonDom4,1048 netMonDom4,1090 netOryCun2,968 netOryCun2,995 netOryCun2,1013 netOryCun2,1048 netOryCun2,1090 netRn6,971 netRn6,998 netRn6,1016 netRn6,1051 netRn6,1093 refGene,342 refSeqComposite,1732 xenoMrna,592 xenoRefGene,303 kept est,724 mrna,440 refGene,318 refSeqComposite,1289 xenoMrna,514 xenoRefGene,279 kirilenko HLTOGAannotvHg38v1,334 km refGene,379 refSeqComposite,1769 xenoRefGene,339 known blastHg18KG,26 chainGalGal3,921 chainGalVar1,936 chainHg19,918 chainMm10,918 chainMm39,918 chainMonDom4,918 chainNetGalGal3,924 chainNetGalVar1,939 chainNetHg19,921 chainNetMm10,920 chainNetMm39,921 chainNetMonDom4,921 chainNetOryCun2,921 chainNetRn6,924 chainOryCun2,918 chainRn6,921 gold,35 gold,112 netGalGal3,921 netGalVar1,936 netHg19,918 netMm10,918 netMm39,918 netMonDom4,918 netOryCun2,918 netRn6,921 refGene,21 refSeqComposite,505 xenoRefGene,15 kontopoulos HLTOGAannotvHg38v1,350 korf nscanGene,337 l HLTOGAannotvHg38v1,353 cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 ensGene,179 transMapEnsemblV5,722 transMapEstV5,691 transMapRefSeqV5,691 transMapRnaV5,691 transMapV5,797 lab HLTOGAannotvHg38v1,323 augustusGene,252 nscanGene,27 nscanGene,256 tRNAs,338 label genscan,98 refGene,140 refGene,152 refGene,175 refSeqComposite,764 refSeqComposite,776 refSeqComposite,812 xenoRefGene,101 xenoRefGene,113 xenoRefGene,136 labeled nestedRepeats,132 refGene,145 refSeqComposite,769 uniprot,457 xenoRefGene,106 labeling est,387 intronEst,468 labels nestedRepeats,161 refGene,117 refSeqComposite,718 refSeqComposite,798 xenoRefGene,78 laboratories nscanGene,265 landrum refGene,376 refSeqComposite,1766 xenoRefGene,336 langton transMapEnsemblV5,721 transMapEstV5,690 transMapRefSeqV5,690 transMapRnaV5,690 transMapV5,796 large quality,46 largely chainGalGal3,145 chainGalVar1,151 chainHg19,143 chainMm10,143 chainMm39,143 chainMonDom4,143 chainNetGalGal3,148 chainNetGalVar1,154 chainNetHg19,146 chainNetMm10,145 chainNetMm39,146 chainNetMonDom4,146 chainNetOryCun2,146 chainNetRn6,148 chainOryCun2,143 chainRn6,145 netGalGal3,145 netGalVar1,151 netHg19,143 netMm10,143 netMm39,143 netMonDom4,143 netOryCun2,143 netRn6,145 larger intronEst,152 largest chainGalGal3,398 chainGalVar1,409 chainHg19,395 chainMm10,395 chainMm39,395 chainMonDom4,395 chainNetGalGal3,401 chainNetGalVar1,412 chainNetHg19,398 chainNetMm10,397 chainNetMm39,398 chainNetMonDom4,398 chainNetOryCun2,398 chainNetRn6,401 chainOryCun2,395 chainRn6,398 netGalGal3,398 netGalVar1,409 netHg19,395 netMm10,395 netMm39,395 netMonDom4,395 netOryCun2,395 netRn6,398 lastz chainGalGal3,596 chainGalGal3,770 chainGalGal3,919 chainGalVar1,609 chainGalVar1,785 chainGalVar1,934 chainHg19,593 chainHg19,767 chainHg19,916 chainMm10,593 chainMm10,767 chainMm10,916 chainMm39,593 chainMm39,767 chainMm39,916 chainMonDom4,593 chainMonDom4,767 chainMonDom4,916 chainNetGalGal3,599 chainNetGalGal3,773 chainNetGalGal3,922 chainNetGalVar1,612 chainNetGalVar1,788 chainNetGalVar1,937 chainNetHg19,596 chainNetHg19,770 chainNetHg19,919 chainNetMm10,595 chainNetMm10,769 chainNetMm10,918 chainNetMm39,596 chainNetMm39,770 chainNetMm39,919 chainNetMonDom4,596 chainNetMonDom4,770 chainNetMonDom4,919 chainNetOryCun2,596 chainNetOryCun2,770 chainNetOryCun2,919 chainNetRn6,599 chainNetRn6,773 chainNetRn6,922 chainOryCun2,593 chainOryCun2,767 chainOryCun2,916 chainRn6,596 chainRn6,770 chainRn6,919 netGalGal3,596 netGalGal3,770 netGalGal3,919 netGalVar1,609 netGalVar1,785 netGalVar1,934 netHg19,593 netHg19,767 netHg19,916 netMm10,593 netMm10,767 netMm10,916 netMm39,593 netMm39,767 netMm39,916 netMonDom4,593 netMonDom4,767 netMonDom4,916 netOryCun2,593 netOryCun2,767 netOryCun2,916 netRn6,596 netRn6,770 netRn6,919 transMapV5,46 lau transMapEnsemblV5,733 transMapEstV5,702 transMapRefSeqV5,702 transMapRnaV5,702 transMapV5,808 lavtoaxt chainGalGal3,614 chainGalVar1,627 chainHg19,611 chainMm10,611 chainMm39,611 chainMonDom4,611 chainNetGalGal3,617 chainNetGalVar1,630 chainNetHg19,614 chainNetMm10,613 chainNetMm39,614 chainNetMonDom4,614 chainNetOryCun2,614 chainNetRn6,617 chainOryCun2,611 chainRn6,614 netGalGal3,614 netGalVar1,627 netHg19,611 netMm10,611 netMm39,611 netMonDom4,611 netOryCun2,611 netRn6,614 learning HLTOGAannotvHg38v1,89 least blastHg18KG,128 est,715 intronEst,68 intronEst,83 intronEst,796 microsat,29 microsat,78 mrna,431 refGene,309 refSeqComposite,1280 xenoMrna,505 xenoRefGene,270 lee uniprot,1955 left refSeqComposite,972 lemur chainGalVar1,3 chainGalVar1,7 chainGalVar1,71 chainGalVar1,105 chainGalVar1,160 chainGalVar1,282 chainGalVar1,311 chainGalVar1,594 chainGalVar1,645 chainNetGalVar1,3 chainNetGalVar1,8 chainNetGalVar1,74 chainNetGalVar1,108 chainNetGalVar1,163 chainNetGalVar1,285 chainNetGalVar1,314 chainNetGalVar1,597 chainNetGalVar1,648 chainNetGalVar1Viewchain,4 chainNetGalVar1Viewnet,4 netGalVar1,3 netGalVar1,7 netGalVar1,71 netGalVar1,105 netGalVar1,160 netGalVar1,282 netGalVar1,311 netGalVar1,594 netGalVar1,645 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 est,38 est,663 genscan,39 intronEst,49 intronEst,87 intronEst,744 less refGene,273 refSeqComposite,1244 transMapEnsemblV5,375 transMapEstV5,344 transMapRefSeqV5,344 transMapRnaV5,344 transMapV5,450 uniprot,680 xenoRefGene,234 level chainGalGal3,393 chainGalGal3,427 chainGalGal3,432 chainGalGal3,439 chainGalGal3,497 chainGalGal3,524 chainGalGal3,537 chainGalGal3,569 chainGalVar1,404 chainGalVar1,438 chainGalVar1,443 chainGalVar1,450 chainGalVar1,508 chainGalVar1,535 chainGalVar1,548 chainGalVar1,580 chainHg19,390 chainHg19,424 chainHg19,429 chainHg19,436 chainHg19,494 chainHg19,521 chainHg19,534 chainHg19,566 chainMm10,390 chainMm10,424 chainMm10,429 chainMm10,436 chainMm10,494 chainMm10,521 chainMm10,534 chainMm10,566 chainMm39,390 chainMm39,424 chainMm39,429 chainMm39,436 chainMm39,494 chainMm39,521 chainMm39,534 chainMm39,566 chainMonDom4,390 chainMonDom4,424 chainMonDom4,429 chainMonDom4,436 chainMonDom4,494 chainMonDom4,521 chainMonDom4,534 chainMonDom4,566 chainNetGalGal3,396 chainNetGalGal3,430 chainNetGalGal3,435 chainNetGalGal3,442 chainNetGalGal3,500 chainNetGalGal3,527 chainNetGalGal3,540 chainNetGalGal3,572 chainNetGalVar1,407 chainNetGalVar1,441 chainNetGalVar1,446 chainNetGalVar1,453 chainNetGalVar1,511 chainNetGalVar1,538 chainNetGalVar1,551 chainNetGalVar1,583 chainNetHg19,393 chainNetHg19,427 chainNetHg19,432 chainNetHg19,439 chainNetHg19,497 chainNetHg19,524 chainNetHg19,537 chainNetHg19,569 chainNetMm10,392 chainNetMm10,426 chainNetMm10,431 chainNetMm10,438 chainNetMm10,496 chainNetMm10,523 chainNetMm10,536 chainNetMm10,568 chainNetMm39,393 chainNetMm39,427 chainNetMm39,432 chainNetMm39,439 chainNetMm39,497 chainNetMm39,524 chainNetMm39,537 chainNetMm39,569 chainNetMonDom4,393 chainNetMonDom4,427 chainNetMonDom4,432 chainNetMonDom4,439 chainNetMonDom4,497 chainNetMonDom4,524 chainNetMonDom4,537 chainNetMonDom4,569 chainNetOryCun2,393 chainNetOryCun2,427 chainNetOryCun2,432 chainNetOryCun2,439 chainNetOryCun2,497 chainNetOryCun2,524 chainNetOryCun2,537 chainNetOryCun2,569 chainNetRn6,396 chainNetRn6,430 chainNetRn6,435 chainNetRn6,442 chainNetRn6,500 chainNetRn6,527 chainNetRn6,540 chainNetRn6,572 chainOryCun2,390 chainOryCun2,424 chainOryCun2,429 chainOryCun2,436 chainOryCun2,494 chainOryCun2,521 chainOryCun2,534 chainOryCun2,566 chainRn6,393 chainRn6,427 chainRn6,432 chainRn6,439 chainRn6,497 chainRn6,524 chainRn6,537 chainRn6,569 est,707 intronEst,97 intronEst,788 mrna,423 netGalGal3,393 netGalGal3,427 netGalGal3,432 netGalGal3,439 netGalGal3,497 netGalGal3,524 netGalGal3,537 netGalGal3,569 netGalVar1,404 netGalVar1,438 netGalVar1,443 netGalVar1,450 netGalVar1,508 netGalVar1,535 netGalVar1,548 netGalVar1,580 netHg19,390 netHg19,424 netHg19,429 netHg19,436 netHg19,494 netHg19,521 netHg19,534 netHg19,566 netMm10,390 netMm10,424 netMm10,429 netMm10,436 netMm10,494 netMm10,521 netMm10,534 netMm10,566 netMm39,390 netMm39,424 netMm39,429 netMm39,436 netMm39,494 netMm39,521 netMm39,534 netMm39,566 netMonDom4,390 netMonDom4,424 netMonDom4,429 netMonDom4,436 netMonDom4,494 netMonDom4,521 netMonDom4,534 netMonDom4,566 netOryCun2,390 netOryCun2,424 netOryCun2,429 netOryCun2,436 netOryCun2,494 netOryCun2,521 netOryCun2,534 netOryCun2,566 netRn6,393 netRn6,427 netRn6,432 netRn6,439 netRn6,497 netRn6,524 netRn6,537 netRn6,569 refGene,101 refGene,301 refSeqComposite,611 refSeqComposite,631 refSeqComposite,1272 rmsk,205 xenoMrna,497 xenoRefGene,62 xenoRefGene,262 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 li nscanGene,303 libraries est,560 intronEst,641 nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 lifted uniprot,1492 lifting uniprot,1843 liftover uniprot,887 uniprot,1878 uniprot,1897 uniprot,1920 uniprot,1924 uniprot,1932 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 refGene,110 refSeqComposite,620 unipAliSwissprot,14 uniprot,506 uniprot,592 xenoRefGene,71 light-blue uniprot,178 lighter rmsk,237 like chainGalGal3,48 chainGalGal3,56 chainGalVar1,51 chainGalVar1,59 chainHg19,47 chainHg19,55 chainMm10,47 chainMm10,55 chainMm39,47 chainMm39,55 chainMonDom4,47 chainMonDom4,55 chainNetGalGal3,51 chainNetGalGal3,59 chainNetGalVar1,54 chainNetGalVar1,62 chainNetHg19,50 chainNetHg19,58 chainNetMm10,49 chainNetMm10,57 chainNetMm39,50 chainNetMm39,58 chainNetMonDom4,50 chainNetMonDom4,58 chainNetOryCun2,50 chainNetOryCun2,58 chainNetRn6,51 chainNetRn6,59 chainOryCun2,47 chainOryCun2,55 chainRn6,48 chainRn6,56 ensGene,148 netGalGal3,48 netGalGal3,56 netGalVar1,51 netGalVar1,59 netHg19,47 netHg19,55 netMm10,47 netMm10,55 netMm39,47 netMm39,55 netMonDom4,47 netMonDom4,55 netOryCun2,47 netOryCun2,55 netRn6,48 netRn6,56 refSeqComposite,83 refSeqComposite,1615 uniprot,1541 likely HLTOGAannotvHg38v1,160 augustusGene,111 microsat,17 refSeqComposite,948 tRNAs,126 tRNAs,169 transMapV5,94 line chainGalGal3,475 chainGalVar1,486 chainHg19,472 chainMm10,472 chainMm39,472 chainMonDom4,472 chainNetGalGal3,478 chainNetGalVar1,489 chainNetHg19,475 chainNetMm10,474 chainNetMm39,475 chainNetMonDom4,475 chainNetOryCun2,475 chainNetRn6,478 chainOryCun2,472 chainRn6,475 gap,73 gold,115 nestedRepeats,151 netGalGal3,475 netGalVar1,486 netHg19,472 netMm10,472 netMm39,472 netMonDom4,472 netOryCun2,472 netRn6,475 refSeqComposite,1003 refSeqComposite,1014 refSeqComposite,1614 rmsk,165 uniprot,1872 uniprot,1876 line-up chainGalGal3,542 chainGalVar1,553 chainHg19,539 chainMm10,539 chainMm39,539 chainMonDom4,539 chainNetGalGal3,545 chainNetGalVar1,556 chainNetHg19,542 chainNetMm10,541 chainNetMm39,542 chainNetMonDom4,542 chainNetOryCun2,542 chainNetRn6,545 chainOryCun2,539 chainRn6,542 netGalGal3,542 netGalVar1,553 netHg19,539 netMm10,539 netMm39,539 netMonDom4,539 netOryCun2,539 netRn6,542 line-ups chainGalGal3,527 chainGalVar1,538 chainHg19,524 chainMm10,524 chainMm39,524 chainMonDom4,524 chainNetGalGal3,530 chainNetGalVar1,541 chainNetHg19,527 chainNetMm10,526 chainNetMm39,527 chainNetMonDom4,527 chainNetOryCun2,527 chainNetRn6,530 chainOryCun2,524 chainRn6,527 netGalGal3,527 netGalVar1,538 netHg19,524 netMm10,524 netMm39,524 netMonDom4,524 netOryCun2,524 netRn6,527 lineage transMapEnsemblV5,810 transMapEstV5,779 transMapRefSeqV5,779 transMapRnaV5,779 transMapV5,885 lineage-specific chainGalGal3,945 chainGalVar1,960 chainHg19,942 chainMm10,942 chainMm39,942 chainMonDom4,942 chainNetGalGal3,948 chainNetGalVar1,963 chainNetHg19,945 chainNetMm10,944 chainNetMm39,945 chainNetMonDom4,945 chainNetOryCun2,945 chainNetRn6,948 chainOryCun2,942 chainRn6,945 netGalGal3,945 netGalVar1,960 netHg19,942 netMm10,942 netMm39,942 netMonDom4,942 netOryCun2,942 netRn6,945 linear chainGalGal3,704 chainGalVar1,719 chainHg19,701 chainMm10,701 chainMm39,701 chainMonDom4,701 chainNetGalGal3,707 chainNetGalVar1,722 chainNetHg19,704 chainNetMm10,703 chainNetMm39,704 chainNetMonDom4,704 chainNetOryCun2,704 chainNetRn6,707 chainOryCun2,701 chainRn6,704 netGalGal3,704 netGalVar1,719 netHg19,701 netMm10,701 netMm39,701 netMonDom4,701 netOryCun2,701 netRn6,704 lineargap chainGalGal3,710 chainGalVar1,725 chainHg19,707 chainMm10,707 chainMm39,707 chainMonDom4,707 chainNetGalGal3,713 chainNetGalVar1,728 chainNetHg19,710 chainNetMm10,709 chainNetMm39,710 chainNetMonDom4,710 chainNetOryCun2,710 chainNetRn6,713 chainOryCun2,707 chainRn6,710 netGalGal3,710 netGalVar1,725 netHg19,707 netMm10,707 netMm39,707 netMonDom4,707 netOryCun2,707 netRn6,710 lines chainGalGal3,133 chainGalGal3,140 chainGalGal3,163 chainGalGal3,455 chainGalVar1,139 chainGalVar1,146 chainGalVar1,171 chainGalVar1,466 chainHg19,131 chainHg19,138 chainHg19,161 chainHg19,452 chainMm10,131 chainMm10,138 chainMm10,161 chainMm10,452 chainMm39,131 chainMm39,138 chainMm39,161 chainMm39,452 chainMonDom4,131 chainMonDom4,138 chainMonDom4,161 chainMonDom4,452 chainNetGalGal3,136 chainNetGalGal3,143 chainNetGalGal3,166 chainNetGalGal3,458 chainNetGalVar1,142 chainNetGalVar1,149 chainNetGalVar1,174 chainNetGalVar1,469 chainNetHg19,134 chainNetHg19,141 chainNetHg19,164 chainNetHg19,455 chainNetMm10,133 chainNetMm10,140 chainNetMm10,163 chainNetMm10,454 chainNetMm39,134 chainNetMm39,141 chainNetMm39,164 chainNetMm39,455 chainNetMonDom4,134 chainNetMonDom4,141 chainNetMonDom4,164 chainNetMonDom4,455 chainNetOryCun2,134 chainNetOryCun2,141 chainNetOryCun2,164 chainNetOryCun2,455 chainNetRn6,136 chainNetRn6,143 chainNetRn6,166 chainNetRn6,458 chainOryCun2,131 chainOryCun2,138 chainOryCun2,161 chainOryCun2,452 chainRn6,133 chainRn6,140 chainRn6,163 chainRn6,455 nestedRepeats,131 netGalGal3,133 netGalGal3,140 netGalGal3,163 netGalGal3,455 netGalVar1,139 netGalVar1,146 netGalVar1,171 netGalVar1,466 netHg19,131 netHg19,138 netHg19,161 netHg19,452 netMm10,131 netMm10,138 netMm10,161 netMm10,452 netMm39,131 netMm39,138 netMm39,161 netMm39,452 netMonDom4,131 netMonDom4,138 netMonDom4,161 netMonDom4,452 netOryCun2,131 netOryCun2,138 netOryCun2,161 netOryCun2,452 netRn6,133 netRn6,140 netRn6,163 netRn6,455 refSeqComposite,998 link gc5Base,63 quality,77 uniprot,491 uniprot,1675 linked refSeqComposite,1532 refSeqComposite,1647 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 uniprot,1919 lipid uniprot,346 lipman blastHg18KG,163 est,755 est,779 intronEst,839 intronEst,863 mrna,472 mrna,496 xenoMrna,546 xenoMrna,570 lipoification uniprot,577 list est,212 intronEst,293 mrna,158 refSeqComposite,763 refSeqComposite,1691 tRNAs,48 uniprot,979 uniprot,1165 uniprot,1831 xenoMrna,232 listed ensGene,49 literature refSeqComposite,283 refSeqComposite,659 uniprot,434 lm uniprot,2019 loaded windowmaskerSdust,79 local blastHg18KG,166 chainGalGal3,113 chainGalGal3,185 chainGalVar1,119 chainGalVar1,193 chainHg19,111 chainHg19,183 chainMm10,111 chainMm10,183 chainMm39,111 chainMm39,183 chainMonDom4,111 chainMonDom4,183 chainNetGalGal3,116 chainNetGalGal3,188 chainNetGalVar1,122 chainNetGalVar1,196 chainNetHg19,114 chainNetHg19,186 chainNetMm10,113 chainNetMm10,185 chainNetMm39,114 chainNetMm39,186 chainNetMonDom4,114 chainNetMonDom4,186 chainNetOryCun2,114 chainNetOryCun2,186 chainNetRn6,116 chainNetRn6,188 chainOryCun2,111 chainOryCun2,183 chainRn6,113 chainRn6,185 ensGene,73 nestedRepeats,98 netGalGal3,113 netGalGal3,185 netGalVar1,119 netGalVar1,193 netHg19,111 netHg19,183 netMm10,111 netMm10,183 netMm39,111 netMm39,183 netMonDom4,111 netMonDom4,183 netOryCun2,111 netOryCun2,183 netRn6,113 netRn6,185 refSeqComposite,1337 located simpleRepeat,21 location chainGalGal3,254 chainGalVar1,262 chainHg19,252 chainMm10,252 chainMm39,252 chainMonDom4,252 chainNetGalGal3,257 chainNetGalVar1,265 chainNetHg19,255 chainNetMm10,254 chainNetMm39,255 chainNetMonDom4,255 chainNetOryCun2,255 chainNetRn6,257 chainOryCun2,252 chainRn6,254 netGalGal3,254 netGalVar1,262 netHg19,252 netMm10,252 netMm39,252 netMonDom4,252 netOryCun2,252 netRn6,254 transMapEnsemblV5,404 transMapEnsemblV5,414 transMapEnsemblV5,481 transMapEstV5,373 transMapEstV5,383 transMapEstV5,450 transMapRefSeqV5,373 transMapRefSeqV5,383 transMapRefSeqV5,450 transMapRnaV5,373 transMapRnaV5,383 transMapRnaV5,450 transMapV5,479 transMapV5,489 transMapV5,556 uniprot,554 uniprot,767 uniprot,1417 locations gap,3 transMapEnsemblV5,493 transMapEstV5,462 transMapRefSeqV5,462 transMapRnaV5,462 transMapV5,568 uniprot,451 locus HLTOGAannotvHg38v1,123 logic est,290 intronEst,371 mrna,236 xenoMrna,310 long est,678 intronEst,759 refSeqComposite,1027 rmsk,161 rmsk,166 long-established transMapEnsemblV5,805 transMapEstV5,774 transMapRefSeqV5,774 transMapRnaV5,774 transMapV5,880 longer chainGalGal3,84 chainGalVar1,88 chainHg19,82 chainMm10,82 chainMm39,82 chainMonDom4,82 chainNetGalGal3,87 chainNetGalVar1,91 chainNetHg19,85 chainNetMm10,84 chainNetMm39,85 chainNetMonDom4,85 chainNetOryCun2,85 chainNetRn6,87 chainOryCun2,82 chainRn6,84 netGalGal3,84 netGalVar1,88 netHg19,82 netMm10,82 netMm39,82 netMonDom4,82 netOryCun2,82 netRn6,84 tRNAs,192 longest chainGalGal3,520 chainGalVar1,531 chainHg19,517 chainMm10,517 chainMm39,517 chainMonDom4,517 chainNetGalGal3,523 chainNetGalVar1,534 chainNetHg19,520 chainNetMm10,519 chainNetMm39,520 chainNetMonDom4,520 chainNetOryCun2,520 chainNetRn6,523 chainOryCun2,517 chainRn6,520 netGalGal3,520 netGalVar1,531 netHg19,517 netMm10,517 netMm39,517 netMonDom4,517 netOryCun2,517 netRn6,520 look chainGalGal3,47 chainGalVar1,50 chainHg19,46 chainMm10,46 chainMm39,46 chainMonDom4,46 chainNetGalGal3,50 chainNetGalVar1,53 chainNetHg19,49 chainNetMm10,48 chainNetMm39,49 chainNetMonDom4,49 chainNetOryCun2,49 chainNetRn6,50 chainOryCun2,46 chainRn6,47 netGalGal3,47 netGalVar1,50 netHg19,46 netMm10,46 netMm39,46 netMonDom4,46 netOryCun2,46 netRn6,47 loose chainGalGal3,711 chainMonDom4,708 chainNetGalGal3,714 chainNetMonDom4,711 netGalGal3,711 netMonDom4,708 loss HLTOGAannotvHg38v1,236 tRNAs,231 losses transMapEnsemblV5,803 transMapEstV5,772 transMapRefSeqV5,772 transMapRnaV5,772 transMapV5,878 lost HLTOGAannotvHg38v1,40 HLTOGAannotvHg38v1,260 HLTOGAannotvHg38v1,272 lot uniprot,1950 louis nscanGene,33 nscanGene,238 low nestedRepeats,39 rmsk,29 rmsk,181 tRNAs,293 lowe tRNAs,337 tRNAs,368 tRNAs,440 transMapEnsemblV5,793 transMapEstV5,762 transMapRefSeqV5,762 transMapRnaV5,762 transMapV5,868 lower chainGalGal3,496 chainGalVar1,507 chainHg19,493 chainMm10,493 chainMm39,493 chainMonDom4,493 chainNetGalGal3,499 chainNetGalVar1,510 chainNetHg19,496 chainNetMm10,495 chainNetMm39,496 chainNetMonDom4,496 chainNetOryCun2,496 chainNetRn6,499 chainOryCun2,493 chainRn6,496 netGalGal3,496 netGalVar1,507 netHg19,493 netMm10,493 netMm39,493 netMonDom4,493 netOryCun2,493 netRn6,496 lower-level chainGalGal3,861 chainGalGal3,867 chainGalVar1,876 chainGalVar1,882 chainHg19,858 chainHg19,864 chainMm10,858 chainMm10,864 chainMm39,858 chainMm39,864 chainMonDom4,858 chainMonDom4,864 chainNetGalGal3,864 chainNetGalGal3,870 chainNetGalVar1,879 chainNetGalVar1,885 chainNetHg19,861 chainNetHg19,867 chainNetMm10,860 chainNetMm10,866 chainNetMm39,861 chainNetMm39,867 chainNetMonDom4,861 chainNetMonDom4,867 chainNetOryCun2,861 chainNetOryCun2,867 chainNetRn6,864 chainNetRn6,870 chainOryCun2,858 chainOryCun2,864 chainRn6,861 chainRn6,867 netGalGal3,861 netGalGal3,867 netGalVar1,876 netGalVar1,882 netHg19,858 netHg19,864 netMm10,858 netMm10,864 netMm39,858 netMm39,864 netMonDom4,858 netMonDom4,864 netOryCun2,858 netOryCun2,864 netRn6,861 netRn6,867 ls-snp uniprot,1536 lt HLTOGAannotvHg38v1,213 refSeqComposite,944 ltr rmsk,170 m HLTOGAannotvHg38v1,345 augustusGene,287 augustusGene,289 augustusGene,317 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 est,750 intronEst,834 mrna,467 transMapEnsemblV5,717 transMapEnsemblV5,724 transMapEnsemblV5,758 transMapEnsemblV5,760 transMapEnsemblV5,792 transMapEstV5,686 transMapEstV5,693 transMapEstV5,727 transMapEstV5,729 transMapEstV5,761 transMapRefSeqV5,686 transMapRefSeqV5,693 transMapRefSeqV5,727 transMapRefSeqV5,729 transMapRefSeqV5,761 transMapRnaV5,686 transMapRnaV5,693 transMapRnaV5,727 transMapRnaV5,729 transMapRnaV5,761 transMapV5,792 transMapV5,799 transMapV5,833 transMapV5,835 transMapV5,867 xenoMrna,541 machine HLTOGAannotvHg38v1,88 made rmsk,110 transMapEnsemblV5,396 transMapEstV5,365 transMapRefSeqV5,365 transMapRnaV5,365 transMapV5,471 uniprot,931 uniprot,938 maglott refGene,406 refSeqComposite,1796 xenoRefGene,366 mailing refSeqComposite,1690 uniprot,1830 main unipAliSwissprot,12 uniprot,156 uniprot,1548 maintained tRNAs,334 uniprot,719 maiti nscanGene,304 make blastHg18KG,66 est,449 est,515 gold,66 intronEst,530 intronEst,596 refGene,57 refSeqComposite,116 refSeqComposite,1099 rmsk,123 tRNAs,252 transMapEnsemblV5,430 transMapEstV5,399 transMapRefSeqV5,399 transMapRnaV5,399 transMapV5,505 uniprot,1406 makedb rmsk,131 making tRNAs,356 uniprot,1978 malayan chainGalVar1,1 chainGalVar1,5 chainGalVar1,69 chainGalVar1,103 chainGalVar1,158 chainGalVar1,280 chainGalVar1,309 chainGalVar1,592 chainGalVar1,643 chainNetGalVar1,1 chainNetGalVar1,6 chainNetGalVar1,72 chainNetGalVar1,106 chainNetGalVar1,161 chainNetGalVar1,283 chainNetGalVar1,312 chainNetGalVar1,595 chainNetGalVar1,646 chainNetGalVar1Viewchain,2 chainNetGalVar1Viewnet,2 netGalVar1,1 netGalVar1,5 netGalVar1,69 netGalVar1,103 netGalVar1,158 netGalVar1,280 netGalVar1,309 netGalVar1,592 netGalVar1,643 mammalian nestedRepeats,368 nestedRepeats,382 refGene,386 refSeqComposite,1776 rmsk,391 rmsk,405 xenoRefGene,346 mammals HLTOGAannotvHg38v1,56 manner refSeqComposite,1627 uniprot,1469 manual nscanGene,210 refSeqComposite,258 uniprot,1652 manually refSeqComposite,250 refSeqComposite,421 many chainGalGal3,406 chainGalVar1,417 chainHg19,403 chainMm10,403 chainMm39,403 chainMonDom4,403 chainNetGalGal3,409 chainNetGalVar1,420 chainNetHg19,406 chainNetMm10,405 chainNetMm39,406 chainNetMonDom4,406 chainNetOryCun2,406 chainNetRn6,409 chainOryCun2,403 chainRn6,406 est,147 gap,15 intronEst,112 intronEst,228 mrna,93 netGalGal3,406 netGalVar1,417 netHg19,403 netMm10,403 netMm39,403 netMonDom4,403 netOryCun2,403 netRn6,406 uniprot,932 uniprot,1124 xenoMrna,167 map chainGalGal3,334 chainGalVar1,345 chainHg19,331 chainMm10,331 chainMm39,331 chainMonDom4,331 chainNetGalGal3,337 chainNetGalVar1,348 chainNetHg19,334 chainNetMm10,333 chainNetMm39,334 chainNetMonDom4,334 chainNetOryCun2,334 chainNetRn6,337 chainOryCun2,331 chainRn6,334 netGalGal3,334 netGalVar1,345 netHg19,331 netMm10,331 netMm39,331 netMonDom4,331 netOryCun2,331 netRn6,334 transMapEnsemblV5,294 transMapEstV5,263 transMapRefSeqV5,263 transMapRnaV5,263 transMapV5,369 uniprot,758 uniprot,1885 mapped augustusGene,298 blastHg18KG,5 nestedRepeats,233 refSeqComposite,1108 transMapEnsemblV5,381 transMapEnsemblV5,413 transMapEnsemblV5,471 transMapEnsemblV5,769 transMapEstV5,350 transMapEstV5,382 transMapEstV5,440 transMapEstV5,738 transMapRefSeqV5,350 transMapRefSeqV5,382 transMapRefSeqV5,440 transMapRefSeqV5,738 transMapRnaV5,350 transMapRnaV5,382 transMapRnaV5,440 transMapRnaV5,738 transMapV5,131 transMapV5,456 transMapV5,488 transMapV5,546 transMapV5,844 uniprot,26 uniprot,97 uniprot,117 uniprot,132 uniprot,200 uniprot,213 uniprot,632 uniprot,1517 mapping cytoBandIdeo,7 gap,4 gc5Base,8 gold,5 quality,8 refSeqComposite,320 transMapEnsemblV5,267 transMapEnsemblV5,287 transMapEnsemblV5,300 transMapEstV5,236 transMapEstV5,256 transMapEstV5,269 transMapRefSeqV5,236 transMapRefSeqV5,256 transMapRefSeqV5,269 transMapRnaV5,236 transMapRnaV5,256 transMapRnaV5,269 transMapV5,342 transMapV5,362 transMapV5,375 ucscToRefSeq,5 uniprot,725 uniprot,752 uniprot,775 uniprot,904 uniprot,1213 uniprot,1322 uniprot,1613 uniprot,1853 mappings transMapEnsemblV5,7 transMapEnsemblV5,503 transMapEstV5,5 transMapEstV5,472 transMapRefSeqV5,6 transMapRefSeqV5,472 transMapRnaV5,6 transMapRnaV5,472 transMapV5,578 uniprot,1362 maps transMapEnsemblV5,477 transMapEnsemblV5,490 transMapEstV5,446 transMapEstV5,459 transMapRefSeqV5,446 transMapRefSeqV5,459 transMapRnaV5,446 transMapRnaV5,459 transMapV5,72 transMapV5,552 transMapV5,565 mar augustusGene,309 nscanGene,285 tRNAs,461 transMapEnsemblV5,780 transMapEstV5,749 transMapRefSeqV5,749 transMapRnaV5,749 transMapV5,855 mario augustusGene,102 augustusGene,283 mark est,536 intronEst,617 transMapEnsemblV5,682 transMapEstV5,651 transMapRefSeqV5,651 transMapRnaV5,651 transMapV5,757 uniprot,1539 uniprot,1956 marked refSeqComposite,525 tRNAs,287 markers microsat,23 markov augustusGene,325 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 nscanGene,224 rmsk,71 windowmaskerSdust,5 windowmaskerSdust,16 masker windowmaskerSdust,102 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainGalGal3,259 chainGalGal3,521 chainGalGal3,559 chainGalVar1,267 chainGalVar1,532 chainGalVar1,570 chainHg19,257 chainHg19,518 chainHg19,556 chainMm10,257 chainMm10,518 chainMm10,556 chainMm39,257 chainMm39,518 chainMm39,556 chainMonDom4,257 chainMonDom4,518 chainMonDom4,556 chainNetGalGal3,262 chainNetGalGal3,524 chainNetGalGal3,562 chainNetGalVar1,270 chainNetGalVar1,535 chainNetGalVar1,573 chainNetHg19,260 chainNetHg19,521 chainNetHg19,559 chainNetMm10,259 chainNetMm10,520 chainNetMm10,558 chainNetMm39,260 chainNetMm39,521 chainNetMm39,559 chainNetMonDom4,260 chainNetMonDom4,521 chainNetMonDom4,559 chainNetOryCun2,260 chainNetOryCun2,521 chainNetOryCun2,559 chainNetRn6,262 chainNetRn6,524 chainNetRn6,562 chainOryCun2,257 chainOryCun2,518 chainOryCun2,556 chainRn6,259 chainRn6,521 chainRn6,559 est,84 est,300 est,315 est,356 est,374 intronEst,165 intronEst,381 intronEst,396 intronEst,437 intronEst,455 mrna,246 mrna,261 mrna,302 mrna,320 netGalGal3,259 netGalGal3,521 netGalGal3,559 netGalVar1,267 netGalVar1,532 netGalVar1,570 netHg19,257 netHg19,518 netHg19,556 netMm10,257 netMm10,518 netMm10,556 netMm39,257 netMm39,518 netMm39,556 netMonDom4,257 netMonDom4,518 netMonDom4,556 netOryCun2,257 netOryCun2,518 netOryCun2,556 netRn6,259 netRn6,521 netRn6,559 refSeqComposite,912 refSeqComposite,926 uniprot,1305 uniprot,1341 xenoMrna,85 xenoMrna,320 xenoMrna,335 xenoMrna,376 xenoMrna,394 matched blastHg18KG,126 matches est,72 mrna,53 xenoMrna,57 matching chainGalGal3,262 chainGalVar1,270 chainHg19,260 chainMm10,260 chainMm39,260 chainMonDom4,260 chainNetGalGal3,265 chainNetGalVar1,273 chainNetHg19,263 chainNetMm10,262 chainNetMm39,263 chainNetMonDom4,263 chainNetOryCun2,263 chainNetRn6,265 chainOryCun2,260 chainRn6,262 est,90 intronEst,171 netGalGal3,262 netGalVar1,270 netHg19,260 netMm10,260 netMm39,260 netMonDom4,260 netOryCun2,260 netRn6,262 uniprot,1068 uniprot,1075 xenoMrna,100 matrix chainGalGal3,674 chainGalGal3,706 chainGalVar1,689 chainGalVar1,721 chainHg19,671 chainHg19,703 chainMm10,671 chainMm10,703 chainMm39,671 chainMm39,703 chainMonDom4,671 chainMonDom4,703 chainNetGalGal3,677 chainNetGalGal3,709 chainNetGalVar1,692 chainNetGalVar1,724 chainNetHg19,674 chainNetHg19,706 chainNetMm10,673 chainNetMm10,705 chainNetMm39,674 chainNetMm39,706 chainNetMonDom4,674 chainNetMonDom4,706 chainNetOryCun2,674 chainNetOryCun2,706 chainNetRn6,677 chainNetRn6,709 chainOryCun2,671 chainOryCun2,703 chainRn6,674 chainRn6,706 netGalGal3,674 netGalGal3,706 netGalVar1,689 netGalVar1,721 netHg19,671 netHg19,703 netMm10,671 netMm10,703 netMm39,671 netMm39,703 netMonDom4,671 netMonDom4,703 netOryCun2,671 netOryCun2,703 netRn6,674 netRn6,706 tRNAs,494 mature est,506 intronEst,587 unipChain,3 uniprot,251 uniprot,292 max nscanGene,262 maximal nscanGene,320 maximally chainGalGal3,666 chainGalVar1,681 chainHg19,663 chainMm10,663 chainMm39,663 chainMonDom4,663 chainNetGalGal3,669 chainNetGalVar1,684 chainNetHg19,666 chainNetMm10,665 chainNetMm39,666 chainNetMonDom4,666 chainNetOryCun2,666 chainNetRn6,669 chainOryCun2,663 chainRn6,666 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netGalGal3,666 netGalVar1,681 netHg19,663 netMm10,663 netMm39,663 netMonDom4,663 netOryCun2,663 netRn6,666 maximilian uniprot,1944 maximum blastHg18KG,93 est,661 intronEst,742 maxtracks augustusGene,139 may HLTOGAannotvHg38v1,189 HLTOGAannotvHg38v1,263 HLTOGAannotvHg38v1,265 chainGalGal3,4 chainGalGal3,67 chainGalGal3,176 chainGalGal3,308 chainGalGal3,435 chainGalVar1,184 chainGalVar1,446 chainHg19,174 chainHg19,432 chainMm10,174 chainMm10,432 chainMm39,174 chainMm39,432 chainMonDom4,174 chainMonDom4,432 chainNetGalGal3,5 chainNetGalGal3,70 chainNetGalGal3,179 chainNetGalGal3,311 chainNetGalGal3,438 chainNetGalGal3Viewchain,3 chainNetGalGal3Viewnet,3 chainNetGalVar1,187 chainNetGalVar1,449 chainNetHg19,177 chainNetHg19,435 chainNetMm10,176 chainNetMm10,434 chainNetMm39,177 chainNetMm39,435 chainNetMonDom4,177 chainNetMonDom4,435 chainNetOryCun2,177 chainNetOryCun2,435 chainNetRn6,179 chainNetRn6,438 chainOryCun2,174 chainOryCun2,432 chainRn6,176 chainRn6,435 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 est,143 est,262 est,272 est,380 est,431 est,511 est,513 est,525 est,527 est,547 est,672 gap,28 gc5Base,40 intronEst,224 intronEst,343 intronEst,353 intronEst,461 intronEst,512 intronEst,592 intronEst,594 intronEst,606 intronEst,608 intronEst,628 intronEst,753 mrna,89 mrna,208 mrna,218 mrna,326 mrna,370 nestedRepeats,268 nestedRepeats,290 netGalGal3,4 netGalGal3,67 netGalGal3,176 netGalGal3,308 netGalGal3,435 netGalVar1,184 netGalVar1,446 netHg19,174 netHg19,432 netMm10,174 netMm10,432 netMm39,174 netMm39,432 netMonDom4,174 netMonDom4,432 netOryCun2,174 netOryCun2,432 netRn6,176 netRn6,435 nscanGene,377 quality,56 refSeqComposite,60 refSeqComposite,663 rmsk,297 rmsk,307 simpleRepeat,43 tRNAs,210 tRNAs,212 tRNAs,325 transMapEnsemblV5,108 transMapEnsemblV5,143 transMapEstV5,77 transMapEstV5,112 transMapRefSeqV5,77 transMapRefSeqV5,112 transMapRnaV5,77 transMapRnaV5,112 transMapV5,183 transMapV5,218 uniprot,2046 xenoMrna,163 xenoMrna,282 xenoMrna,292 xenoMrna,400 xenoMrna,444 mcgarvey refGene,378 refSeqComposite,1768 xenoRefGene,338 md5 uniprot,1601 mdash est,485 est,489 gap,19 gap,27 intronEst,566 intronEst,570 mean tRNAs,117 mediating uniprot,314 medium chainGalVar1,726 chainHg19,708 chainMm10,708 chainMm39,708 chainNetGalVar1,729 chainNetHg19,711 chainNetMm10,710 chainNetMm39,711 chainNetOryCun2,711 chainNetRn6,714 chainOryCun2,708 chainRn6,711 netGalVar1,726 netHg19,708 netMm10,708 netMm39,708 netOryCun2,708 netRn6,711 refGene,112 refSeqComposite,622 xenoRefGene,73 mellifera augustusGene,216 mementos nestedRepeats,377 rmsk,400 menu refGene,213 refSeqComposite,850 xenoRefGene,174 method HLTOGAannotvHg38v1,27 ensGene,120 uniprot,726 uniprot,753 uniprot,776 methods HLTOGAannotvHg38v1,41 augustusGene,46 blastHg18KG,35 chainGalGal3,571 chainGalGal3,774 chainGalVar1,582 chainGalVar1,789 chainHg19,568 chainHg19,771 chainMm10,568 chainMm10,771 chainMm39,568 chainMm39,771 chainMonDom4,568 chainMonDom4,771 chainNetGalGal3,574 chainNetGalGal3,777 chainNetGalVar1,585 chainNetGalVar1,792 chainNetHg19,571 chainNetHg19,774 chainNetMm10,570 chainNetMm10,773 chainNetMm39,571 chainNetMm39,774 chainNetMonDom4,571 chainNetMonDom4,774 chainNetOryCun2,571 chainNetOryCun2,774 chainNetRn6,574 chainNetRn6,777 chainOryCun2,568 chainOryCun2,771 chainRn6,571 chainRn6,774 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 ensGene,29 ensGene,35 est,447 genscan,130 genscan,197 intronEst,528 microsat,45 mrna,386 nestedRepeats,244 netGalGal3,571 netGalGal3,774 netGalVar1,582 netGalVar1,789 netHg19,568 netHg19,771 netMm10,568 netMm10,771 netMm39,568 netMm39,771 netMonDom4,568 netMonDom4,771 netOryCun2,568 netOryCun2,771 netRn6,571 netRn6,774 nscanGene,36 refGene,256 refSeqComposite,91 refSeqComposite,1140 refSeqComposite,1222 rmsk,286 simpleRepeat,55 transMapEnsemblV5,152 transMapEstV5,121 transMapRefSeqV5,121 transMapRnaV5,121 transMapV5,227 uniprot,777 windowmaskerSdust,46 xenoMrna,460 xenoRefGene,217 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 michael HLTOGAannotvHg38v1,321 nscanGene,228 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 middle HLTOGAannotvHg38v1,144 HLTOGAannotvHg38v1,178 HLTOGAannotvHg38v1,225 HLTOGAannotvHg38v1,244 might est,108 est,681 intronEst,189 intronEst,762 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller blastHg18KG,159 chainGalGal3,939 chainGalGal3,976 chainGalGal3,1037 chainGalGal3,1057 chainGalGal3,1105 chainGalVar1,954 chainGalVar1,991 chainGalVar1,1052 chainGalVar1,1072 chainGalVar1,1120 chainHg19,936 chainHg19,973 chainHg19,1034 chainHg19,1054 chainHg19,1102 chainMm10,936 chainMm10,973 chainMm10,1034 chainMm10,1054 chainMm10,1102 chainMm39,936 chainMm39,973 chainMm39,1034 chainMm39,1054 chainMm39,1102 chainMonDom4,936 chainMonDom4,973 chainMonDom4,1034 chainMonDom4,1054 chainMonDom4,1102 chainNetGalGal3,942 chainNetGalGal3,979 chainNetGalGal3,1040 chainNetGalGal3,1060 chainNetGalGal3,1108 chainNetGalVar1,957 chainNetGalVar1,994 chainNetGalVar1,1055 chainNetGalVar1,1075 chainNetGalVar1,1123 chainNetHg19,939 chainNetHg19,976 chainNetHg19,1037 chainNetHg19,1057 chainNetHg19,1105 chainNetMm10,938 chainNetMm10,975 chainNetMm10,1036 chainNetMm10,1056 chainNetMm10,1104 chainNetMm39,939 chainNetMm39,976 chainNetMm39,1037 chainNetMm39,1057 chainNetMm39,1105 chainNetMonDom4,939 chainNetMonDom4,976 chainNetMonDom4,1037 chainNetMonDom4,1057 chainNetMonDom4,1105 chainNetOryCun2,939 chainNetOryCun2,976 chainNetOryCun2,1037 chainNetOryCun2,1057 chainNetOryCun2,1105 chainNetRn6,942 chainNetRn6,979 chainNetRn6,1040 chainNetRn6,1060 chainNetRn6,1108 chainOryCun2,936 chainOryCun2,973 chainOryCun2,1034 chainOryCun2,1054 chainOryCun2,1102 chainRn6,939 chainRn6,976 chainRn6,1037 chainRn6,1057 chainRn6,1105 netGalGal3,939 netGalGal3,976 netGalGal3,1037 netGalGal3,1057 netGalGal3,1105 netGalVar1,954 netGalVar1,991 netGalVar1,1052 netGalVar1,1072 netGalVar1,1120 netHg19,936 netHg19,973 netHg19,1034 netHg19,1054 netHg19,1102 netMm10,936 netMm10,973 netMm10,1034 netMm10,1054 netMm10,1102 netMm39,936 netMm39,973 netMm39,1034 netMm39,1054 netMm39,1102 netMonDom4,936 netMonDom4,973 netMonDom4,1034 netMonDom4,1054 netMonDom4,1102 netOryCun2,936 netOryCun2,973 netOryCun2,1034 netOryCun2,1054 netOryCun2,1102 netRn6,939 netRn6,976 netRn6,1037 netRn6,1057 netRn6,1105 minexonintronprob augustusGene,135 minimum chainGalGal3,687 chainGalVar1,702 chainHg19,684 chainMm10,684 chainMm39,684 chainMonDom4,684 chainNetGalGal3,690 chainNetGalVar1,705 chainNetHg19,687 chainNetMm10,686 chainNetMm39,687 chainNetMonDom4,687 chainNetOryCun2,687 chainNetRn6,690 chainOryCun2,684 chainRn6,687 netGalGal3,687 netGalVar1,702 netHg19,684 netMm10,684 netMm39,684 netMonDom4,684 netOryCun2,684 netRn6,687 minmeanexonintronprob augustusGene,137 minmei chainGalGal3,931 chainGalVar1,946 chainHg19,928 chainMm10,928 chainMm39,928 chainMonDom4,928 chainNetGalGal3,934 chainNetGalVar1,949 chainNetHg19,931 chainNetMm10,930 chainNetMm39,931 chainNetMonDom4,931 chainNetOryCun2,931 chainNetRn6,934 chainOryCun2,928 chainRn6,931 netGalGal3,931 netGalVar1,946 netHg19,928 netMm10,928 netMm39,928 netMonDom4,928 netOryCun2,928 netRn6,931 mismatch refSeqComposite,896 rmsk,218 mismatching refSeqComposite,900 misplacements uniprot,853 missing HLTOGAannotvHg38v1,205 HLTOGAannotvHg38v1,212 mitochondrion refSeqComposite,241 mj nscanGene,362 refGene,377 refSeqComposite,1767 xenoRefGene,337 mk_counts windowmaskerSdust,59 mm10 chainMm10,7 chainMm10,69 chainMm10,309 chainNetMm10,1 chainNetMm10,7 chainNetMm10,71 chainNetMm10,311 chainNetMm10Viewchain,6 chainNetMm10Viewnet,6 netMm10,7 netMm10,69 netMm10,309 mm39 chainMm39,7 chainMm39,69 chainMm39,309 chainNetMm39,8 chainNetMm39,72 chainNetMm39,312 chainNetMm39Viewchain,6 chainNetMm39Viewnet,6 netMm39,7 netMm39,69 netMm39,309 mm9 nscanGene,190 mo nscanGene,34 mode chainGalGal3,390 chainGalVar1,401 chainHg19,387 chainMm10,387 chainMm39,387 chainMonDom4,387 chainNetGalGal3,393 chainNetGalVar1,404 chainNetHg19,390 chainNetMm10,389 chainNetMm39,390 chainNetMonDom4,390 chainNetOryCun2,390 chainNetRn6,393 chainOryCun2,387 chainRn6,390 est,63 est,128 gold,59 intronEst,147 intronEst,209 mrna,44 mrna,74 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netGalGal3,390 netGalVar1,401 netHg19,387 netMm10,387 netMm39,387 netMonDom4,387 netOryCun2,387 netRn6,390 rmsk,142 xenoMrna,48 xenoMrna,148 model augustusGene,121 augustusGene,326 genscan,140 model-based tRNAs,61 modeling genscan,182 nscanGene,42 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 genscan,158 nscanGene,81 nscanGene,86 nscanGene,126 nscanGene,131 nscanGene,220 tRNAs,403 uniprot,733 modes chainGalGal3,244 chainGalVar1,252 chainHg19,242 chainMm10,242 chainMm39,242 chainMonDom4,242 chainNetGalGal3,247 chainNetGalVar1,255 chainNetHg19,245 chainNetMm10,244 chainNetMm39,245 chainNetMonDom4,245 chainNetOryCun2,245 chainNetRn6,247 chainOryCun2,242 chainRn6,244 netGalGal3,244 netGalVar1,252 netHg19,242 netMm10,242 netMm39,242 netMonDom4,242 netOryCun2,242 netRn6,244 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modifications unipModif,2 unipModif,6 uniprot,340 uniprot,574 modified rmsk,57 uniprot,343 modsnp uniprot,2030 moiety-binding uniprot,347 mol blastHg18KG,171 cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,221 tRNAs,430 molecular genscan,199 molecule tRNAs,147 mondom4 chainMonDom4,7 chainMonDom4,69 chainMonDom4,309 chainNetMonDom4,8 chainNetMonDom4,72 chainNetMonDom4,312 chainNetMonDom4Viewchain,6 chainNetMonDom4Viewnet,6 netMonDom4,7 netMonDom4,69 netMonDom4,309 months uniprot,1573 morales HLTOGAannotvHg38v1,346 more augustusGene,35 blastHg18KG,107 blastHg18KG,150 chainGalGal3,165 chainGalGal3,226 chainGalVar1,173 chainGalVar1,234 chainHg19,163 chainHg19,224 chainMm10,163 chainMm10,224 chainMm39,163 chainMm39,224 chainMonDom4,163 chainMonDom4,224 chainNetGalGal3,168 chainNetGalGal3,229 chainNetGalVar1,176 chainNetGalVar1,237 chainNetHg19,166 chainNetHg19,227 chainNetMm10,165 chainNetMm10,226 chainNetMm39,166 chainNetMm39,227 chainNetMonDom4,166 chainNetMonDom4,227 chainNetOryCun2,166 chainNetOryCun2,227 chainNetRn6,168 chainNetRn6,229 chainOryCun2,163 chainOryCun2,224 chainRn6,165 chainRn6,226 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 ensGene,18 ensGene,158 est,68 est,175 est,282 est,412 est,436 genscan,50 genscan,125 genscan,163 intronEst,256 intronEst,363 intronEst,493 intronEst,517 microsat,96 mrna,49 mrna,121 mrna,228 mrna,349 mrna,375 nestedRepeats,211 nestedRepeats,300 netGalGal3,165 netGalGal3,226 netGalVar1,173 netGalVar1,234 netHg19,163 netHg19,224 netMm10,163 netMm10,224 netMm39,163 netMm39,224 netMonDom4,163 netMonDom4,224 netOryCun2,163 netOryCun2,224 netRn6,165 netRn6,226 nscanGene,158 refGene,71 refGene,215 refSeqComposite,94 refSeqComposite,130 refSeqComposite,852 refSeqComposite,1383 refSeqComposite,1463 rmsk,323 simpleRepeat,57 transMapEnsemblV5,131 transMapEnsemblV5,148 transMapEnsemblV5,224 transMapEnsemblV5,269 transMapEnsemblV5,291 transMapEnsemblV5,568 transMapEstV5,100 transMapEstV5,117 transMapEstV5,193 transMapEstV5,238 transMapEstV5,260 transMapEstV5,537 transMapRefSeqV5,100 transMapRefSeqV5,117 transMapRefSeqV5,193 transMapRefSeqV5,238 transMapRefSeqV5,260 transMapRefSeqV5,537 transMapRnaV5,100 transMapRnaV5,117 transMapRnaV5,193 transMapRnaV5,238 transMapRnaV5,260 transMapRnaV5,537 transMapV5,63 transMapV5,107 transMapV5,164 transMapV5,206 transMapV5,223 transMapV5,299 transMapV5,344 transMapV5,366 transMapV5,643 uniprot,498 uniprot,691 uniprot,984 uniprot,1841 xenoMrna,53 xenoMrna,195 xenoMrna,302 xenoMrna,423 xenoMrna,449 xenoRefGene,176 morgulis windowmaskerSdust,90 most augustusGene,93 augustusGene,110 est,484 intronEst,565 nestedRepeats,249 refSeqComposite,580 refSeqComposite,947 transMapV5,93 uniprot,683 uniprot,756 uniprot,1295 uniprot,1391 mostly tRNAs,298 uniprot,1365 motif tRNAs,38 motifs uniprot,388 mount nscanGene,295 mouse chainGalGal3,1070 chainGalVar1,1085 chainHg19,1067 chainMm10,1 chainMm10,3 chainMm10,65 chainMm10,97 chainMm10,150 chainMm10,270 chainMm10,297 chainMm10,578 chainMm10,627 chainMm10,1067 chainMm39,1 chainMm39,3 chainMm39,65 chainMm39,97 chainMm39,150 chainMm39,270 chainMm39,297 chainMm39,578 chainMm39,627 chainMm39,1067 chainMonDom4,1067 chainNetGalGal3,1073 chainNetGalVar1,1088 chainNetHg19,1070 chainNetMm10,3 chainNetMm10,67 chainNetMm10,99 chainNetMm10,152 chainNetMm10,272 chainNetMm10,299 chainNetMm10,580 chainNetMm10,629 chainNetMm10,1069 chainNetMm10Viewchain,2 chainNetMm10Viewnet,2 chainNetMm39,1 chainNetMm39,4 chainNetMm39,68 chainNetMm39,100 chainNetMm39,153 chainNetMm39,273 chainNetMm39,300 chainNetMm39,581 chainNetMm39,630 chainNetMm39,1070 chainNetMm39Viewchain,2 chainNetMm39Viewnet,2 chainNetMonDom4,1070 chainNetOryCun2,1070 chainNetRn6,1073 chainOryCun2,1067 chainRn6,1070 netGalGal3,1070 netGalVar1,1085 netHg19,1067 netMm10,1 netMm10,3 netMm10,65 netMm10,97 netMm10,150 netMm10,270 netMm10,297 netMm10,578 netMm10,627 netMm10,1067 netMm39,1 netMm39,3 netMm39,65 netMm39,97 netMm39,150 netMm39,270 netMm39,297 netMm39,578 netMm39,627 netMm39,1067 netMonDom4,1067 netOryCun2,1067 netRn6,1070 transMapEnsemblV5,44 transMapEnsemblV5,367 transMapEstV5,336 transMapRefSeqV5,336 transMapRnaV5,336 transMapV5,442 uniprot,521 uniprot,535 mr nscanGene,273 nscanGene,344 nscanGene,364 mrna est,9 est,507 est,523 est,606 intronEst,10 intronEst,588 intronEst,604 intronEst,687 mrna,9 mrna,14 mrna,129 mrna,403 mrna,443 mrna,450 transMapEnsemblV5,458 transMapEstV5,427 transMapRefSeqV5,427 transMapRnaV5,18 transMapRnaV5,427 transMapV5,100 transMapV5,533 xenoMrna,8 xenoMrna,22 xenoMrna,203 xenoMrna,476 xenoMrna,517 xenoMrna,524 mrnas mrna,3 mrna,6 mrna,21 mrna,139 mrna,244 mrna,259 mrna,300 mrna,318 mrna,343 mrna,390 nscanGene,193 transMapEnsemblV5,173 transMapEstV5,142 transMapRefSeqV5,142 transMapRnaV5,142 transMapV5,111 transMapV5,248 xenoMrna,2 xenoMrna,5 xenoMrna,213 xenoMrna,318 xenoMrna,333 xenoMrna,374 xenoMrna,392 xenoMrna,417 xenoMrna,462 much chainGalGal3,888 chainGalGal3,905 chainGalVar1,903 chainGalVar1,920 chainHg19,885 chainHg19,902 chainMm10,885 chainMm10,902 chainMm39,885 chainMm39,902 chainMonDom4,885 chainMonDom4,902 chainNetGalGal3,891 chainNetGalGal3,908 chainNetGalVar1,906 chainNetGalVar1,923 chainNetHg19,888 chainNetHg19,905 chainNetMm10,887 chainNetMm10,904 chainNetMm39,888 chainNetMm39,905 chainNetMonDom4,888 chainNetMonDom4,905 chainNetOryCun2,888 chainNetOryCun2,905 chainNetRn6,891 chainNetRn6,908 chainOryCun2,885 chainOryCun2,902 chainRn6,888 chainRn6,905 nestedRepeats,210 netGalGal3,888 netGalGal3,905 netGalVar1,903 netGalVar1,920 netHg19,885 netHg19,902 netMm10,885 netMm10,902 netMm39,885 netMm39,902 netMonDom4,885 netMonDom4,902 netOryCun2,885 netOryCun2,902 netRn6,888 netRn6,905 mujica uniprot,1967 multiple chainGalGal3,197 chainGalVar1,205 chainHg19,195 chainMm10,195 chainMm39,195 chainMonDom4,195 chainNetGalGal3,200 chainNetGalVar1,208 chainNetHg19,198 chainNetMm10,197 chainNetMm39,198 chainNetMonDom4,198 chainNetOryCun2,198 chainNetRn6,200 chainOryCun2,195 chainRn6,197 est,260 est,690 intronEst,341 intronEst,771 mrna,206 mrna,406 netGalGal3,197 netGalVar1,205 netHg19,195 netMm10,195 netMm39,195 netMonDom4,195 netOryCun2,195 netRn6,197 nscanGene,275 refGene,284 refSeqComposite,1255 refSeqComposite,1302 transMapEnsemblV5,501 transMapEstV5,470 transMapRefSeqV5,470 transMapRnaV5,470 transMapV5,576 uniprot,58 uniprot,1067 uniprot,1095 xenoMrna,280 xenoMrna,479 xenoRefGene,245 multiple-genome nscanGene,53 multistep tRNAs,492 munegowda HLTOGAannotvHg38v1,336 must intronEst,63 intronEst,80 refSeqComposite,303 refSeqComposite,1636 mutagenesis uniprot,353 mutat uniprot,2044 mutated uniprot,618 mutation HLTOGAannotvHg38v1,157 HLTOGAannotvHg38v1,186 HLTOGAannotvHg38v1,233 HLTOGAannotvHg38v1,241 chainGalGal3,186 chainGalVar1,194 chainHg19,184 chainMm10,184 chainMm39,184 chainMonDom4,184 chainNetGalGal3,189 chainNetGalVar1,197 chainNetHg19,187 chainNetMm10,186 chainNetMm39,187 chainNetMonDom4,187 chainNetOryCun2,187 chainNetRn6,189 chainOryCun2,184 chainRn6,186 netGalGal3,186 netGalVar1,194 netHg19,184 netMm10,184 netMm39,184 netMonDom4,184 netOryCun2,184 netRn6,186 refSeqComposite,563 mutation-related uniprot,408 mutations HLTOGAannotvHg38v1,276 HLTOGAannotvHg38v1,306 unipMut,1 unipMut,5 uniprot,352 myers blastHg18KG,161 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 ensGene,115 ensGene,125 refSeqComposite,1328 refSeqComposite,1631 refSeqComposite,1645 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 refSeqComposite,918 refSeqComposite,959 refSeqComposite,986 refSeqComposite,1045 refSeqComposite,1072 refSeqComposite,1087 n-scan nscanGene,1 nscanGene,2 nscanGene,17 nscanGene,37 nscanGene,39 nscanGene,85 nscanGene,107 nscanGene,114 nscanGene,120 nscanGene,155 nscanGene,161 nscanGene,249 name chainGalGal3,372 chainGalVar1,383 chainHg19,369 chainMm10,369 chainMm39,369 chainMonDom4,369 chainNetGalGal3,375 chainNetGalVar1,386 chainNetHg19,372 chainNetMm10,371 chainNetMm39,372 chainNetMonDom4,372 chainNetOryCun2,372 chainNetRn6,375 chainOryCun2,369 chainRn6,372 est,201 intronEst,282 mrna,147 nestedRepeats,136 netGalGal3,372 netGalVar1,383 netHg19,369 netMm10,369 netMm39,369 netMonDom4,369 netOryCun2,369 netRn6,372 refGene,148 refGene,158 refGene,163 refSeqComposite,759 refSeqComposite,772 refSeqComposite,782 refSeqComposite,790 refSeqComposite,802 uniprot,105 uniprot,461 uniprot,541 uniprot,1577 xenoMrna,221 xenoRefGene,109 xenoRefGene,119 xenoRefGene,124 names chainGalGal3,248 chainGalVar1,256 chainHg19,246 chainMm10,246 chainMm39,246 chainMonDom4,246 chainNetGalGal3,251 chainNetGalVar1,259 chainNetHg19,249 chainNetMm10,248 chainNetMm39,249 chainNetMonDom4,249 chainNetOryCun2,249 chainNetRn6,251 chainOryCun2,246 chainRn6,248 netGalGal3,248 netGalVar1,256 netHg19,246 netMm10,246 netMm39,246 netMonDom4,246 netOryCun2,246 netRn6,248 refGene,170 refSeqComposite,807 ucscToRefSeq,16 xenoRefGene,131 native augustusGene,295 transMapEnsemblV5,766 transMapEstV5,735 transMapRefSeqV5,735 transMapRnaV5,735 transMapV5,123 transMapV5,841 natl chainGalGal3,1075 chainGalVar1,1090 chainHg19,1072 chainMm10,1072 chainMm39,1072 chainMonDom4,1072 chainNetGalGal3,1078 chainNetGalVar1,1093 chainNetHg19,1075 chainNetMm10,1074 chainNetMm39,1075 chainNetMonDom4,1075 chainNetOryCun2,1075 chainNetRn6,1078 chainOryCun2,1072 chainRn6,1075 netGalGal3,1075 netGalVar1,1090 netHg19,1072 netMm10,1072 netMm39,1072 netMonDom4,1072 netOryCun2,1072 netRn6,1075 natural chainGalGal3,826 chainGalVar1,841 chainHg19,823 chainMm10,823 chainMm39,823 chainMonDom4,823 chainNetGalGal3,829 chainNetGalVar1,844 chainNetHg19,826 chainNetMm10,825 chainNetMm39,826 chainNetMonDom4,826 chainNetOryCun2,826 chainNetRn6,829 chainOryCun2,823 chainRn6,826 netGalGal3,826 netGalVar1,841 netHg19,823 netMm10,823 netMm39,823 netMonDom4,823 netOryCun2,823 netRn6,826 naview tRNAs,348 nbci uniprot,822 nbsp HLTOGAannotvHg38v1,142 HLTOGAannotvHg38v1,164 HLTOGAannotvHg38v1,211 HLTOGAannotvHg38v1,234 HLTOGAannotvHg38v1,271 chainGalGal3,677 chainGalVar1,692 chainHg19,674 chainMm10,674 chainMm39,674 chainMonDom4,674 chainNetGalGal3,680 chainNetGalVar1,695 chainNetHg19,677 chainNetMm10,676 chainNetMm39,677 chainNetMonDom4,677 chainNetOryCun2,677 chainNetRn6,680 chainOryCun2,674 chainRn6,677 netGalGal3,677 netGalVar1,692 netHg19,674 netMm10,674 netMm39,674 netMonDom4,674 netOryCun2,674 netRn6,677 ncbi blastHg18KG,145 ncbiRefSeq,3 ncbiRefSeqCurated,3 ncbiRefSeqGenomicDiff,5 ncbiRefSeqOther,3 ncbiRefSeqPredicted,3 refGene,31 refGene,338 refGene,408 refSeqComposite,1 refSeqComposite,6 refSeqComposite,13 refSeqComposite,28 refSeqComposite,73 refSeqComposite,80 refSeqComposite,105 refSeqComposite,318 refSeqComposite,374 refSeqComposite,546 refSeqComposite,642 refSeqComposite,649 refSeqComposite,693 refSeqComposite,1160 refSeqComposite,1191 refSeqComposite,1207 refSeqComposite,1728 refSeqComposite,1798 ucscToRefSeq,22 ucscToRefSeq,33 uniprot,840 uniprot,856 uniprot,1024 uniprot,1046 uniprot,1049 uniprot,1079 uniprot,1204 uniprot,1274 uniprot,1280 uniprot,1289 uniprot,1299 windowmaskerSdust,29 windowmaskerSdust,43 xenoRefGene,29 xenoRefGene,299 xenoRefGene,368 ncbirefseq refSeqComposite,1411 refSeqComposite,1555 refSeqComposite,1699 ncbirefseqcurated refSeqComposite,1414 ncbirefseqdiffs.bb refSeqComposite,1494 ncbirefseqother.bb refSeqComposite,1492 refSeqComposite,1556 ncbirefseqpredicted refSeqComposite,1417 refSeqComposite,1619 ncbirefseqpredicted.gtf refSeqComposite,1620 ncbirefseqpsl refSeqComposite,1425 ndash refSeqComposite,200 refSeqComposite,211 refSeqComposite,341 refSeqComposite,380 refSeqComposite,435 refSeqComposite,459 refSeqComposite,482 refSeqComposite,519 refSeqComposite,552 refSeqComposite,897 refSeqComposite,931 refSeqComposite,964 refSeqComposite,1022 refSeqComposite,1048 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 refSeqComposite,1648 near-best transMapEnsemblV5,358 transMapEstV5,327 transMapRefSeqV5,327 transMapRnaV5,327 transMapV5,433 necessary chainGalGal3,810 chainGalVar1,825 chainHg19,807 chainMm10,807 chainMm39,807 chainMonDom4,807 chainNetGalGal3,813 chainNetGalVar1,828 chainNetHg19,810 chainNetMm10,809 chainNetMm39,810 chainNetMonDom4,810 chainNetOryCun2,810 chainNetRn6,813 chainOryCun2,807 chainRn6,810 netGalGal3,810 netGalVar1,825 netHg19,807 netMm10,807 netMm39,807 netMonDom4,807 netOryCun2,807 netRn6,810 nematodes augustusGene,211 net chainGalGal3,35 chainGalGal3,264 chainGalGal3,267 chainGalGal3,385 chainGalGal3,764 chainGalVar1,38 chainGalVar1,272 chainGalVar1,275 chainGalVar1,396 chainGalVar1,779 chainHg19,34 chainHg19,262 chainHg19,265 chainHg19,382 chainHg19,761 chainMm10,34 chainMm10,262 chainMm10,265 chainMm10,382 chainMm10,761 chainMm39,34 chainMm39,262 chainMm39,265 chainMm39,382 chainMm39,761 chainMonDom4,34 chainMonDom4,262 chainMonDom4,265 chainMonDom4,382 chainMonDom4,761 chainNetGalGal3,3 chainNetGalGal3,12 chainNetGalGal3,38 chainNetGalGal3,267 chainNetGalGal3,270 chainNetGalGal3,388 chainNetGalGal3,767 chainNetGalGal3Viewchain,10 chainNetGalGal3Viewnet,1 chainNetGalGal3Viewnet,10 chainNetGalVar1,5 chainNetGalVar1,15 chainNetGalVar1,41 chainNetGalVar1,275 chainNetGalVar1,278 chainNetGalVar1,399 chainNetGalVar1,782 chainNetGalVar1Viewchain,11 chainNetGalVar1Viewnet,1 chainNetGalVar1Viewnet,11 chainNetHg19,3 chainNetHg19,11 chainNetHg19,37 chainNetHg19,265 chainNetHg19,268 chainNetHg19,385 chainNetHg19,764 chainNetHg19Viewchain,9 chainNetHg19Viewnet,1 chainNetHg19Viewnet,9 chainNetMm10,10 chainNetMm10,36 chainNetMm10,264 chainNetMm10,267 chainNetMm10,384 chainNetMm10,763 chainNetMm10Viewchain,9 chainNetMm10Viewnet,1 chainNetMm10Viewnet,9 chainNetMm39,3 chainNetMm39,11 chainNetMm39,37 chainNetMm39,265 chainNetMm39,268 chainNetMm39,385 chainNetMm39,764 chainNetMm39Viewchain,9 chainNetMm39Viewnet,1 chainNetMm39Viewnet,9 chainNetMonDom4,3 chainNetMonDom4,11 chainNetMonDom4,37 chainNetMonDom4,265 chainNetMonDom4,268 chainNetMonDom4,385 chainNetMonDom4,764 chainNetMonDom4Viewchain,9 chainNetMonDom4Viewnet,1 chainNetMonDom4Viewnet,9 chainNetOryCun2,3 chainNetOryCun2,11 chainNetOryCun2,37 chainNetOryCun2,265 chainNetOryCun2,268 chainNetOryCun2,385 chainNetOryCun2,764 chainNetOryCun2Viewchain,9 chainNetOryCun2Viewnet,1 chainNetOryCun2Viewnet,9 chainNetRn6,3 chainNetRn6,12 chainNetRn6,38 chainNetRn6,267 chainNetRn6,270 chainNetRn6,388 chainNetRn6,767 chainNetRn6Viewchain,10 chainNetRn6Viewnet,1 chainNetRn6Viewnet,10 chainOryCun2,34 chainOryCun2,262 chainOryCun2,265 chainOryCun2,382 chainOryCun2,761 chainRn6,35 chainRn6,264 chainRn6,267 chainRn6,385 chainRn6,764 netGalGal3,2 netGalGal3,10 netGalGal3,35 netGalGal3,264 netGalGal3,267 netGalGal3,385 netGalGal3,764 netGalVar1,4 netGalVar1,13 netGalVar1,38 netGalVar1,272 netGalVar1,275 netGalVar1,396 netGalVar1,779 netHg19,2 netHg19,9 netHg19,34 netHg19,262 netHg19,265 netHg19,382 netHg19,761 netMm10,2 netMm10,9 netMm10,34 netMm10,262 netMm10,265 netMm10,382 netMm10,761 netMm39,2 netMm39,9 netMm39,34 netMm39,262 netMm39,265 netMm39,382 netMm39,761 netMonDom4,2 netMonDom4,9 netMonDom4,34 netMonDom4,262 netMonDom4,265 netMonDom4,382 netMonDom4,761 netOryCun2,2 netOryCun2,9 netOryCun2,34 netOryCun2,262 netOryCun2,265 netOryCun2,382 netOryCun2,761 netRn6,2 netRn6,10 netRn6,35 netRn6,264 netRn6,267 netRn6,385 netRn6,764 transMapV5,140 netclass chainGalGal3,880 chainGalGal3,1003 chainGalVar1,895 chainGalVar1,1018 chainHg19,877 chainHg19,1000 chainMm10,877 chainMm10,1000 chainMm39,877 chainMm39,1000 chainMonDom4,877 chainMonDom4,1000 chainNetGalGal3,883 chainNetGalGal3,1006 chainNetGalVar1,898 chainNetGalVar1,1021 chainNetHg19,880 chainNetHg19,1003 chainNetMm10,879 chainNetMm10,1002 chainNetMm39,880 chainNetMm39,1003 chainNetMonDom4,880 chainNetMonDom4,1003 chainNetOryCun2,880 chainNetOryCun2,1003 chainNetRn6,883 chainNetRn6,1006 chainOryCun2,877 chainOryCun2,1000 chainRn6,880 chainRn6,1003 netGalGal3,880 netGalGal3,1003 netGalVar1,895 netGalVar1,1018 netHg19,877 netHg19,1000 netMm10,877 netMm10,1000 netMm39,877 netMm39,1000 netMonDom4,877 netMonDom4,1000 netOryCun2,877 netOryCun2,1000 netRn6,880 netRn6,1003 netfilter transMapEnsemblV5,254 transMapEstV5,223 transMapRefSeqV5,223 transMapRnaV5,223 transMapV5,329 nets chainGalGal3,990 chainGalVar1,1005 chainHg19,987 chainMm10,987 chainMm39,987 chainMonDom4,987 chainNetGalGal3,993 chainNetGalVar1,1008 chainNetHg19,990 chainNetMm10,989 chainNetMm39,990 chainNetMonDom4,990 chainNetOryCun2,990 chainNetRn6,993 chainOryCun2,987 chainRn6,990 netGalGal3,990 netGalVar1,1005 netHg19,987 netMm10,987 netMm39,987 netMonDom4,987 netOryCun2,987 netRn6,990 transMapEnsemblV5,200 transMapEnsemblV5,243 transMapEnsemblV5,249 transMapEnsemblV5,263 transMapEstV5,169 transMapEstV5,212 transMapEstV5,218 transMapEstV5,232 transMapRefSeqV5,169 transMapRefSeqV5,212 transMapRefSeqV5,218 transMapRefSeqV5,232 transMapRnaV5,169 transMapRnaV5,212 transMapRnaV5,218 transMapRnaV5,232 transMapV5,89 transMapV5,275 transMapV5,318 transMapV5,324 transMapV5,338 netsyntenic chainGalGal3,848 chainGalGal3,1001 chainGalVar1,863 chainGalVar1,1016 chainHg19,845 chainHg19,998 chainMm10,845 chainMm10,998 chainMm39,845 chainMm39,998 chainMonDom4,845 chainMonDom4,998 chainNetGalGal3,851 chainNetGalGal3,1004 chainNetGalVar1,866 chainNetGalVar1,1019 chainNetHg19,848 chainNetHg19,1001 chainNetMm10,847 chainNetMm10,1000 chainNetMm39,848 chainNetMm39,1001 chainNetMonDom4,848 chainNetMonDom4,1001 chainNetOryCun2,848 chainNetOryCun2,1001 chainNetRn6,851 chainNetRn6,1004 chainOryCun2,845 chainOryCun2,998 chainRn6,848 chainRn6,1001 netGalGal3,848 netGalGal3,1001 netGalVar1,863 netGalVar1,1016 netHg19,845 netHg19,998 netMm10,845 netMm10,998 netMm39,845 netMm39,998 netMonDom4,845 netMonDom4,998 netOryCun2,845 netOryCun2,998 netRn6,848 netRn6,1001 new augustusGene,329 tRNAs,482 newer est,558 intronEst,639 nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next blastHg18KG,60 chainGalGal3,351 chainGalGal3,380 chainGalVar1,362 chainGalVar1,391 chainHg19,348 chainHg19,377 chainMm10,348 chainMm10,377 chainMm39,348 chainMm39,377 chainMonDom4,348 chainMonDom4,377 chainNetGalGal3,354 chainNetGalGal3,383 chainNetGalVar1,365 chainNetGalVar1,394 chainNetHg19,351 chainNetHg19,380 chainNetMm10,350 chainNetMm10,379 chainNetMm39,351 chainNetMm39,380 chainNetMonDom4,351 chainNetMonDom4,380 chainNetOryCun2,351 chainNetOryCun2,380 chainNetRn6,354 chainNetRn6,383 chainOryCun2,348 chainOryCun2,377 chainRn6,351 chainRn6,380 netGalGal3,351 netGalGal3,380 netGalVar1,362 netGalVar1,391 netHg19,348 netHg19,377 netMm10,348 netMm10,377 netMm39,348 netMm39,377 netMonDom4,348 netMonDom4,377 netOryCun2,348 netOryCun2,377 netRn6,351 netRn6,380 refSeqComposite,167 refSeqComposite,755 nig augustusGene,270 nm refSeqComposite,225 refSeqComposite,492 nm_ ncbiRefSeq,9 ncbiRefSeqCurated,8 ncbiRefSeqOther,8 refGene,8 nm_012309 refSeqComposite,1139 nm_012309.4 refSeqComposite,1137 no HLTOGAannotvHg38v1,155 HLTOGAannotvHg38v1,184 HLTOGAannotvHg38v1,231 blastHg18KG,97 est,95 intronEst,176 microsat,73 nscanGene,172 nscanGene,209 tRNAs,191 transMapEnsemblV5,223 transMapEstV5,192 transMapRefSeqV5,192 transMapRnaV5,192 transMapV5,298 uniprot,1031 uniprot,1078 uniprot,1262 uniprot,1324 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainGalGal3,50 chainGalVar1,53 chainHg19,49 chainMm10,49 chainMm39,49 chainMonDom4,49 chainNetGalGal3,53 chainNetGalVar1,56 chainNetHg19,52 chainNetMm10,51 chainNetMm39,52 chainNetMonDom4,52 chainNetOryCun2,52 chainNetRn6,53 chainOryCun2,49 chainRn6,50 netGalGal3,50 netGalVar1,53 netHg19,49 netMm10,49 netMm39,49 netMonDom4,49 netOryCun2,49 netRn6,50 non-coding augustusGene,75 refGene,232 refSeqComposite,1088 xenoRefGene,193 non-guinea xenoMrna,3 xenoRefGene,3 non-mrna est,627 intronEst,708 non-protein-coding refGene,26 refGene,240 refSeqComposite,23 xenoRefGene,18 xenoRefGene,201 non-redundant refGene,414 refSeqComposite,1804 xenoRefGene,374 nonsyn chainGalGal3,557 chainGalVar1,568 chainHg19,554 chainMm10,554 chainMm39,554 chainMonDom4,554 chainNetGalGal3,560 chainNetGalVar1,571 chainNetHg19,557 chainNetMm10,556 chainNetMm39,557 chainNetMonDom4,557 chainNetOryCun2,557 chainNetRn6,560 chainOryCun2,554 chainRn6,557 netGalGal3,557 netGalVar1,568 netHg19,554 netMm10,554 netMm39,554 netMonDom4,554 netOryCun2,554 netRn6,557 nor tRNAs,265 xenoMrna,126 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not HLTOGAannotvHg38v1,252 HLTOGAannotvHg38v1,266 chainGalGal3,815 chainGalVar1,830 chainHg19,812 chainMm10,812 chainMm39,812 chainMonDom4,812 chainNetGalGal3,818 chainNetGalVar1,833 chainNetHg19,815 chainNetMm10,814 chainNetMm39,815 chainNetMonDom4,815 chainNetOryCun2,815 chainNetRn6,818 chainOryCun2,812 chainRn6,815 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 est,352 est,487 est,514 est,528 intronEst,433 intronEst,568 intronEst,595 intronEst,609 mrna,298 ncbiRefSeqOther,7 netGalGal3,815 netGalVar1,830 netHg19,812 netMm10,812 netMm39,812 netMonDom4,812 netOryCun2,812 netRn6,815 nscanGene,178 nscanGene,223 refSeqComposite,177 refSeqComposite,391 refSeqComposite,429 refSeqComposite,474 refSeqComposite,675 refSeqComposite,700 refSeqComposite,1060 refSeqComposite,1138 rmsk,113 rmsk,313 tRNAs,136 tRNAs,153 tRNAs,213 tRNAs,263 tRNAs,306 transMapEnsemblV5,62 uniprot,169 uniprot,627 uniprot,959 uniprot,1130 uniprot,1455 xenoMrna,122 xenoMrna,372 note est,658 intronEst,739 nestedRepeats,264 refSeqComposite,176 refSeqComposite,1621 tRNAs,283 transMapEnsemblV5,499 transMapEstV5,468 transMapRefSeqV5,468 transMapRnaV5,468 transMapV5,574 uniprot,695 novel HLTOGAannotvHg38v1,75 nscanGene,168 transMapEnsemblV5,740 transMapEstV5,709 transMapRefSeqV5,709 transMapRnaV5,709 transMapV5,815 novo augustusGene,304 nscanGene,58 transMapEnsemblV5,775 transMapEstV5,744 transMapRefSeqV5,744 transMapRnaV5,744 transMapV5,850 now uniprot,1680 np refSeqComposite,227 refSeqComposite,230 np_ ncbiRefSeq,13 ncbiRefSeqCurated,10 ncbiRefSeqOther,12 nr refSeqComposite,226 refSeqComposite,494 nr_ ncbiRefSeq,11 ncbiRefSeqCurated,9 ncbiRefSeqOther,9 refGene,10 ns chainGalGal3,895 chainGalVar1,910 chainHg19,892 chainMm10,892 chainMm39,892 chainMonDom4,892 chainNetGalGal3,898 chainNetGalVar1,913 chainNetHg19,895 chainNetMm10,894 chainNetMm39,895 chainNetMonDom4,895 chainNetOryCun2,895 chainNetRn6,898 chainOryCun2,892 chainRn6,895 gap,110 netGalGal3,895 netGalVar1,910 netHg19,892 netMm10,892 netMm39,892 netMonDom4,892 netOryCun2,892 netRn6,895 nuclear rmsk,155 rmsk,163 nucleic ensGene,195 est,762 est,787 intronEst,846 intronEst,871 microsat,125 mrna,479 mrna,504 nscanGene,324 refGene,389 refGene,422 refSeqComposite,1779 refSeqComposite,1812 simpleRepeat,85 tRNAs,381 tRNAs,404 tRNAs,457 tRNAs,500 uniprot,1997 xenoMrna,553 xenoMrna,578 xenoRefGene,349 xenoRefGene,382 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 number augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 intronEst,153 nscanGene,73 rmsk,233 transMapEnsemblV5,427 transMapEnsemblV5,550 transMapEstV5,396 transMapEstV5,519 transMapRefSeqV5,396 transMapRefSeqV5,519 transMapRnaV5,396 transMapRnaV5,519 transMapV5,502 transMapV5,625 numbers gap,108 o refGene,371 refSeqComposite,1761 xenoRefGene,331 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 uniprot,1114 obtain tRNAs,45 tRNAs,67 transMapEnsemblV5,652 transMapEstV5,621 transMapRefSeqV5,621 transMapRnaV5,621 transMapV5,727 uniprot,1803 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 refSeqComposite,1486 refSeqComposite,1506 transMapEnsemblV5,157 transMapEnsemblV5,612 transMapEstV5,126 transMapEstV5,581 transMapRefSeqV5,126 transMapRefSeqV5,581 transMapRnaV5,126 transMapRnaV5,581 transMapV5,232 transMapV5,687 uniprot,1506 uniprot,1695 occasional refSeqComposite,63 occur simpleRepeat,36 oct augustusGene,334 blastHg18KG,174 nscanGene,328 of HLTOGAannotvHg38v1,49 HLTOGAannotvHg38v1,81 HLTOGAannotvHg38v1,112 HLTOGAannotvHg38v1,115 HLTOGAannotvHg38v1,146 HLTOGAannotvHg38v1,168 HLTOGAannotvHg38v1,180 HLTOGAannotvHg38v1,201 HLTOGAannotvHg38v1,215 HLTOGAannotvHg38v1,227 HLTOGAannotvHg38v1,246 augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 blastHg18KG,19 blastHg18KG,110 blastHg18KG,122 blastHg18KG,130 blastHg18KG,143 chainGalGal3,18 chainGalGal3,65 chainGalGal3,184 chainGalGal3,204 chainGalGal3,257 chainGalGal3,279 chainGalGal3,363 chainGalGal3,373 chainGalGal3,491 chainGalGal3,511 chainGalGal3,646 chainGalGal3,651 chainGalGal3,669 chainGalGal3,689 chainGalGal3,889 chainGalGal3,964 chainGalGal3,986 chainGalGal3,1010 chainGalGal3,1024 chainGalVar1,21 chainGalVar1,68 chainGalVar1,192 chainGalVar1,212 chainGalVar1,265 chainGalVar1,289 chainGalVar1,374 chainGalVar1,384 chainGalVar1,502 chainGalVar1,522 chainGalVar1,661 chainGalVar1,666 chainGalVar1,684 chainGalVar1,704 chainGalVar1,904 chainGalVar1,979 chainGalVar1,1001 chainGalVar1,1025 chainGalVar1,1039 chainHg19,17 chainHg19,64 chainHg19,182 chainHg19,202 chainHg19,255 chainHg19,277 chainHg19,360 chainHg19,370 chainHg19,488 chainHg19,508 chainHg19,643 chainHg19,648 chainHg19,666 chainHg19,686 chainHg19,886 chainHg19,961 chainHg19,983 chainHg19,1007 chainHg19,1021 chainMm10,17 chainMm10,64 chainMm10,182 chainMm10,202 chainMm10,255 chainMm10,277 chainMm10,360 chainMm10,370 chainMm10,488 chainMm10,508 chainMm10,643 chainMm10,648 chainMm10,666 chainMm10,686 chainMm10,886 chainMm10,961 chainMm10,983 chainMm10,1007 chainMm10,1021 chainMm39,17 chainMm39,64 chainMm39,182 chainMm39,202 chainMm39,255 chainMm39,277 chainMm39,360 chainMm39,370 chainMm39,488 chainMm39,508 chainMm39,643 chainMm39,648 chainMm39,666 chainMm39,686 chainMm39,886 chainMm39,961 chainMm39,983 chainMm39,1007 chainMm39,1021 chainMonDom4,17 chainMonDom4,64 chainMonDom4,182 chainMonDom4,202 chainMonDom4,255 chainMonDom4,277 chainMonDom4,360 chainMonDom4,370 chainMonDom4,488 chainMonDom4,508 chainMonDom4,643 chainMonDom4,648 chainMonDom4,666 chainMonDom4,686 chainMonDom4,886 chainMonDom4,961 chainMonDom4,983 chainMonDom4,1007 chainMonDom4,1021 chainNetGalGal3,21 chainNetGalGal3,68 chainNetGalGal3,187 chainNetGalGal3,207 chainNetGalGal3,260 chainNetGalGal3,282 chainNetGalGal3,366 chainNetGalGal3,376 chainNetGalGal3,494 chainNetGalGal3,514 chainNetGalGal3,649 chainNetGalGal3,654 chainNetGalGal3,672 chainNetGalGal3,692 chainNetGalGal3,892 chainNetGalGal3,967 chainNetGalGal3,989 chainNetGalGal3,1013 chainNetGalGal3,1027 chainNetGalVar1,24 chainNetGalVar1,71 chainNetGalVar1,195 chainNetGalVar1,215 chainNetGalVar1,268 chainNetGalVar1,292 chainNetGalVar1,377 chainNetGalVar1,387 chainNetGalVar1,505 chainNetGalVar1,525 chainNetGalVar1,664 chainNetGalVar1,669 chainNetGalVar1,687 chainNetGalVar1,707 chainNetGalVar1,907 chainNetGalVar1,982 chainNetGalVar1,1004 chainNetGalVar1,1028 chainNetGalVar1,1042 chainNetHg19,20 chainNetHg19,67 chainNetHg19,185 chainNetHg19,205 chainNetHg19,258 chainNetHg19,280 chainNetHg19,363 chainNetHg19,373 chainNetHg19,491 chainNetHg19,511 chainNetHg19,646 chainNetHg19,651 chainNetHg19,669 chainNetHg19,689 chainNetHg19,889 chainNetHg19,964 chainNetHg19,986 chainNetHg19,1010 chainNetHg19,1024 chainNetMm10,19 chainNetMm10,66 chainNetMm10,184 chainNetMm10,204 chainNetMm10,257 chainNetMm10,279 chainNetMm10,362 chainNetMm10,372 chainNetMm10,490 chainNetMm10,510 chainNetMm10,645 chainNetMm10,650 chainNetMm10,668 chainNetMm10,688 chainNetMm10,888 chainNetMm10,963 chainNetMm10,985 chainNetMm10,1009 chainNetMm10,1023 chainNetMm39,20 chainNetMm39,67 chainNetMm39,185 chainNetMm39,205 chainNetMm39,258 chainNetMm39,280 chainNetMm39,363 chainNetMm39,373 chainNetMm39,491 chainNetMm39,511 chainNetMm39,646 chainNetMm39,651 chainNetMm39,669 chainNetMm39,689 chainNetMm39,889 chainNetMm39,964 chainNetMm39,986 chainNetMm39,1010 chainNetMm39,1024 chainNetMonDom4,20 chainNetMonDom4,67 chainNetMonDom4,185 chainNetMonDom4,205 chainNetMonDom4,258 chainNetMonDom4,280 chainNetMonDom4,363 chainNetMonDom4,373 chainNetMonDom4,491 chainNetMonDom4,511 chainNetMonDom4,646 chainNetMonDom4,651 chainNetMonDom4,669 chainNetMonDom4,689 chainNetMonDom4,889 chainNetMonDom4,964 chainNetMonDom4,986 chainNetMonDom4,1010 chainNetMonDom4,1024 chainNetOryCun2,20 chainNetOryCun2,67 chainNetOryCun2,185 chainNetOryCun2,205 chainNetOryCun2,258 chainNetOryCun2,280 chainNetOryCun2,363 chainNetOryCun2,373 chainNetOryCun2,491 chainNetOryCun2,511 chainNetOryCun2,646 chainNetOryCun2,651 chainNetOryCun2,669 chainNetOryCun2,689 chainNetOryCun2,889 chainNetOryCun2,964 chainNetOryCun2,986 chainNetOryCun2,1010 chainNetOryCun2,1024 chainNetRn6,21 chainNetRn6,68 chainNetRn6,187 chainNetRn6,207 chainNetRn6,260 chainNetRn6,282 chainNetRn6,366 chainNetRn6,376 chainNetRn6,494 chainNetRn6,514 chainNetRn6,649 chainNetRn6,654 chainNetRn6,672 chainNetRn6,692 chainNetRn6,892 chainNetRn6,967 chainNetRn6,989 chainNetRn6,1013 chainNetRn6,1027 chainOryCun2,17 chainOryCun2,64 chainOryCun2,182 chainOryCun2,202 chainOryCun2,255 chainOryCun2,277 chainOryCun2,360 chainOryCun2,370 chainOryCun2,488 chainOryCun2,508 chainOryCun2,643 chainOryCun2,648 chainOryCun2,666 chainOryCun2,686 chainOryCun2,886 chainOryCun2,961 chainOryCun2,983 chainOryCun2,1007 chainOryCun2,1021 chainRn6,18 chainRn6,65 chainRn6,184 chainRn6,204 chainRn6,257 chainRn6,279 chainRn6,363 chainRn6,373 chainRn6,491 chainRn6,511 chainRn6,646 chainRn6,651 chainRn6,669 chainRn6,689 chainRn6,889 chainRn6,964 chainRn6,986 chainRn6,1010 chainRn6,1024 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ensGene,33 ensGene,134 est,43 est,73 est,82 est,100 est,102 est,137 est,176 est,202 est,213 est,249 est,318 est,428 est,505 est,521 est,539 est,556 est,618 est,626 est,630 est,710 gap,16 gap,23 gap,50 gap,56 gap,90 gap,100 gap,109 gap,122 gap,132 gc5Base,19 gc5Base,46 gc5Base,52 gc5Base,67 gc5Base,76 genscan,43 genscan,110 genscan,134 genscan,212 gold,15 gold,79 gold,104 gold,132 intronEst,33 intronEst,54 intronEst,66 intronEst,98 intronEst,110 intronEst,119 intronEst,154 intronEst,163 intronEst,181 intronEst,183 intronEst,218 intronEst,257 intronEst,283 intronEst,294 intronEst,330 intronEst,399 intronEst,509 intronEst,586 intronEst,602 intronEst,620 intronEst,637 intronEst,699 intronEst,707 intronEst,711 intronEst,791 microsat,27 microsat,55 microsat,64 microsat,81 mrna,54 mrna,83 mrna,122 mrna,148 mrna,159 mrna,195 mrna,264 mrna,367 mrna,426 ncbiRefSeqPsl,5 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netGalGal3,18 netGalGal3,65 netGalGal3,184 netGalGal3,204 netGalGal3,257 netGalGal3,279 netGalGal3,363 netGalGal3,373 netGalGal3,491 netGalGal3,511 netGalGal3,646 netGalGal3,651 netGalGal3,669 netGalGal3,689 netGalGal3,889 netGalGal3,964 netGalGal3,986 netGalGal3,1010 netGalGal3,1024 netGalVar1,21 netGalVar1,68 netGalVar1,192 netGalVar1,212 netGalVar1,265 netGalVar1,289 netGalVar1,374 netGalVar1,384 netGalVar1,502 netGalVar1,522 netGalVar1,661 netGalVar1,666 netGalVar1,684 netGalVar1,704 netGalVar1,904 netGalVar1,979 netGalVar1,1001 netGalVar1,1025 netGalVar1,1039 netHg19,17 netHg19,64 netHg19,182 netHg19,202 netHg19,255 netHg19,277 netHg19,360 netHg19,370 netHg19,488 netHg19,508 netHg19,643 netHg19,648 netHg19,666 netHg19,686 netHg19,886 netHg19,961 netHg19,983 netHg19,1007 netHg19,1021 netMm10,17 netMm10,64 netMm10,182 netMm10,202 netMm10,255 netMm10,277 netMm10,360 netMm10,370 netMm10,488 netMm10,508 netMm10,643 netMm10,648 netMm10,666 netMm10,686 netMm10,886 netMm10,961 netMm10,983 netMm10,1007 netMm10,1021 netMm39,17 netMm39,64 netMm39,182 netMm39,202 netMm39,255 netMm39,277 netMm39,360 netMm39,370 netMm39,488 netMm39,508 netMm39,643 netMm39,648 netMm39,666 netMm39,686 netMm39,886 netMm39,961 netMm39,983 netMm39,1007 netMm39,1021 netMonDom4,17 netMonDom4,64 netMonDom4,182 netMonDom4,202 netMonDom4,255 netMonDom4,277 netMonDom4,360 netMonDom4,370 netMonDom4,488 netMonDom4,508 netMonDom4,643 netMonDom4,648 netMonDom4,666 netMonDom4,686 netMonDom4,886 netMonDom4,961 netMonDom4,983 netMonDom4,1007 netMonDom4,1021 netOryCun2,17 netOryCun2,64 netOryCun2,182 netOryCun2,202 netOryCun2,255 netOryCun2,277 netOryCun2,360 netOryCun2,370 netOryCun2,488 netOryCun2,508 netOryCun2,643 netOryCun2,648 netOryCun2,666 netOryCun2,686 netOryCun2,886 netOryCun2,961 netOryCun2,983 netOryCun2,1007 netOryCun2,1021 netRn6,18 netRn6,65 netRn6,184 netRn6,204 netRn6,257 netRn6,279 netRn6,363 netRn6,373 netRn6,491 netRn6,511 netRn6,646 netRn6,651 netRn6,669 netRn6,689 netRn6,889 netRn6,964 netRn6,986 netRn6,1010 netRn6,1024 nscanGene,74 nscanGene,82 nscanGene,217 nscanGene,248 quality,21 quality,32 quality,38 quality,62 quality,68 quality,81 quality,93 refGene,5 refGene,102 refGene,121 refGene,135 refGene,160 refGene,272 refGene,304 refGene,417 refSeqComposite,162 refSeqComposite,195 refSeqComposite,213 refSeqComposite,260 refSeqComposite,321 refSeqComposite,343 refSeqComposite,437 refSeqComposite,489 refSeqComposite,521 refSeqComposite,528 refSeqComposite,554 refSeqComposite,612 refSeqComposite,632 refSeqComposite,710 refSeqComposite,738 refSeqComposite,787 refSeqComposite,796 refSeqComposite,876 refSeqComposite,891 refSeqComposite,943 refSeqComposite,989 refSeqComposite,1007 refSeqComposite,1055 refSeqComposite,1243 refSeqComposite,1275 refSeqComposite,1348 refSeqComposite,1429 refSeqComposite,1431 refSeqComposite,1501 refSeqComposite,1571 refSeqComposite,1651 refSeqComposite,1697 refSeqComposite,1701 refSeqComposite,1807 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 tRNAs,49 tRNAs,72 tRNAs,82 tRNAs,90 tRNAs,164 tRNAs,232 tRNAs,245 tRNAs,273 tRNAs,320 tRNAs,358 tRNAs,373 tRNAs,450 tRNAs,481 tRNAs,496 transMapEnsemblV5,85 transMapEnsemblV5,140 transMapEnsemblV5,169 transMapEnsemblV5,209 transMapEnsemblV5,275 transMapEnsemblV5,282 transMapEnsemblV5,298 transMapEnsemblV5,310 transMapEnsemblV5,323 transMapEnsemblV5,341 transMapEnsemblV5,360 transMapEnsemblV5,378 transMapEnsemblV5,457 transMapEnsemblV5,508 transMapEnsemblV5,551 transMapEnsemblV5,739 transMapEnsemblV5,804 transMapEstV5,54 transMapEstV5,109 transMapEstV5,138 transMapEstV5,178 transMapEstV5,244 transMapEstV5,251 transMapEstV5,267 transMapEstV5,279 transMapEstV5,292 transMapEstV5,310 transMapEstV5,329 transMapEstV5,347 transMapEstV5,426 transMapEstV5,477 transMapEstV5,520 transMapEstV5,708 transMapEstV5,773 transMapRefSeqV5,54 transMapRefSeqV5,109 transMapRefSeqV5,138 transMapRefSeqV5,178 transMapRefSeqV5,244 transMapRefSeqV5,251 transMapRefSeqV5,267 transMapRefSeqV5,279 transMapRefSeqV5,292 transMapRefSeqV5,310 transMapRefSeqV5,329 transMapRefSeqV5,347 transMapRefSeqV5,426 transMapRefSeqV5,477 transMapRefSeqV5,520 transMapRefSeqV5,708 transMapRefSeqV5,773 transMapRnaV5,54 transMapRnaV5,109 transMapRnaV5,138 transMapRnaV5,178 transMapRnaV5,244 transMapRnaV5,251 transMapRnaV5,267 transMapRnaV5,279 transMapRnaV5,292 transMapRnaV5,310 transMapRnaV5,329 transMapRnaV5,347 transMapRnaV5,426 transMapRnaV5,477 transMapRnaV5,520 transMapRnaV5,708 transMapRnaV5,773 transMapV5,55 transMapV5,215 transMapV5,244 transMapV5,284 transMapV5,350 transMapV5,357 transMapV5,373 transMapV5,385 transMapV5,398 transMapV5,416 transMapV5,435 transMapV5,453 transMapV5,532 transMapV5,583 transMapV5,626 transMapV5,814 transMapV5,879 unipAliSwissprot,5 unipAliTrembl,5 unipInterest,4 uniprot,83 uniprot,269 uniprot,298 uniprot,310 uniprot,385 uniprot,407 uniprot,420 uniprot,452 uniprot,465 uniprot,542 uniprot,561 uniprot,652 uniprot,677 uniprot,877 uniprot,902 uniprot,980 uniprot,1111 uniprot,1125 uniprot,1159 uniprot,1166 uniprot,1181 uniprot,1288 uniprot,1298 uniprot,1306 uniprot,1315 uniprot,1347 uniprot,1360 uniprot,1363 uniprot,1397 uniprot,1436 uniprot,1457 uniprot,1590 uniprot,1594 uniprot,1639 uniprot,1646 uniprot,1656 uniprot,1666 uniprot,1684 uniprot,1687 uniprot,1710 uniprot,1951 xenoMrna,18 xenoMrna,58 xenoMrna,76 xenoMrna,98 xenoMrna,108 xenoMrna,157 xenoMrna,196 xenoMrna,222 xenoMrna,233 xenoMrna,269 xenoMrna,338 xenoMrna,441 xenoMrna,500 xenoRefGene,63 xenoRefGene,82 xenoRefGene,96 xenoRefGene,121 xenoRefGene,233 xenoRefGene,265 xenoRefGene,377 off chainGalGal3,342 chainGalGal3,348 chainGalVar1,353 chainGalVar1,359 chainHg19,339 chainHg19,345 chainMm10,339 chainMm10,345 chainMm39,339 chainMm39,345 chainMonDom4,339 chainMonDom4,345 chainNetGalGal3,345 chainNetGalGal3,351 chainNetGalVar1,356 chainNetGalVar1,362 chainNetHg19,342 chainNetHg19,348 chainNetMm10,341 chainNetMm10,347 chainNetMm39,342 chainNetMm39,348 chainNetMonDom4,342 chainNetMonDom4,348 chainNetOryCun2,342 chainNetOryCun2,348 chainNetRn6,345 chainNetRn6,351 chainOryCun2,339 chainOryCun2,345 chainRn6,342 chainRn6,348 netGalGal3,342 netGalGal3,348 netGalVar1,353 netGalVar1,359 netHg19,339 netHg19,345 netMm10,339 netMm10,345 netMm39,339 netMm39,345 netMonDom4,339 netMonDom4,345 netOryCun2,339 netOryCun2,345 netRn6,342 netRn6,348 refGene,173 refSeqComposite,810 xenoRefGene,134 offers genscan,79 often HLTOGAannotvHg38v1,206 chainGalGal3,215 chainGalGal3,227 chainGalVar1,223 chainGalVar1,235 chainHg19,213 chainHg19,225 chainMm10,213 chainMm10,225 chainMm39,213 chainMm39,225 chainMonDom4,213 chainMonDom4,225 chainNetGalGal3,218 chainNetGalGal3,230 chainNetGalVar1,226 chainNetGalVar1,238 chainNetHg19,216 chainNetHg19,228 chainNetMm10,215 chainNetMm10,227 chainNetMm39,216 chainNetMm39,228 chainNetMonDom4,216 chainNetMonDom4,228 chainNetOryCun2,216 chainNetOryCun2,228 chainNetRn6,218 chainNetRn6,230 chainOryCun2,213 chainOryCun2,225 chainRn6,215 chainRn6,227 netGalGal3,215 netGalGal3,227 netGalVar1,223 netGalVar1,235 netHg19,213 netHg19,225 netMm10,213 netMm10,225 netMm39,213 netMm39,225 netMonDom4,213 netMonDom4,225 netOryCun2,213 netOryCun2,225 netRn6,215 netRn6,227 older uniprot,1560 uniprot,1647 oligo-dt est,498 intronEst,579 omim refSeqComposite,784 refSeqComposite,803 omitted nestedRepeats,165 on HLTOGAannotvHg38v1,79 HLTOGAannotvHg38v1,295 augustusGene,29 augustusGene,37 augustusGene,151 blastHg18KG,152 chainGalGal3,330 chainGalGal3,356 chainGalGal3,459 chainGalGal3,473 chainGalGal3,523 chainGalGal3,528 chainGalGal3,543 chainGalGal3,776 chainGalVar1,341 chainGalVar1,367 chainGalVar1,470 chainGalVar1,484 chainGalVar1,534 chainGalVar1,539 chainGalVar1,554 chainGalVar1,791 chainHg19,327 chainHg19,353 chainHg19,456 chainHg19,470 chainHg19,520 chainHg19,525 chainHg19,540 chainHg19,773 chainMm10,327 chainMm10,353 chainMm10,456 chainMm10,470 chainMm10,520 chainMm10,525 chainMm10,540 chainMm10,773 chainMm39,327 chainMm39,353 chainMm39,456 chainMm39,470 chainMm39,520 chainMm39,525 chainMm39,540 chainMm39,773 chainMonDom4,327 chainMonDom4,353 chainMonDom4,456 chainMonDom4,470 chainMonDom4,520 chainMonDom4,525 chainMonDom4,540 chainMonDom4,773 chainNetGalGal3,333 chainNetGalGal3,359 chainNetGalGal3,462 chainNetGalGal3,476 chainNetGalGal3,526 chainNetGalGal3,531 chainNetGalGal3,546 chainNetGalGal3,779 chainNetGalVar1,344 chainNetGalVar1,370 chainNetGalVar1,473 chainNetGalVar1,487 chainNetGalVar1,537 chainNetGalVar1,542 chainNetGalVar1,557 chainNetGalVar1,794 chainNetHg19,330 chainNetHg19,356 chainNetHg19,459 chainNetHg19,473 chainNetHg19,523 chainNetHg19,528 chainNetHg19,543 chainNetHg19,776 chainNetMm10,329 chainNetMm10,355 chainNetMm10,458 chainNetMm10,472 chainNetMm10,522 chainNetMm10,527 chainNetMm10,542 chainNetMm10,775 chainNetMm39,330 chainNetMm39,356 chainNetMm39,459 chainNetMm39,473 chainNetMm39,523 chainNetMm39,528 chainNetMm39,543 chainNetMm39,776 chainNetMonDom4,330 chainNetMonDom4,356 chainNetMonDom4,459 chainNetMonDom4,473 chainNetMonDom4,523 chainNetMonDom4,528 chainNetMonDom4,543 chainNetMonDom4,776 chainNetOryCun2,330 chainNetOryCun2,356 chainNetOryCun2,459 chainNetOryCun2,473 chainNetOryCun2,523 chainNetOryCun2,528 chainNetOryCun2,543 chainNetOryCun2,776 chainNetRn6,333 chainNetRn6,359 chainNetRn6,462 chainNetRn6,476 chainNetRn6,526 chainNetRn6,531 chainNetRn6,546 chainNetRn6,779 chainOryCun2,327 chainOryCun2,353 chainOryCun2,456 chainOryCun2,470 chainOryCun2,520 chainOryCun2,525 chainOryCun2,540 chainOryCun2,773 chainRn6,330 chainRn6,356 chainRn6,459 chainRn6,473 chainRn6,523 chainRn6,528 chainRn6,543 chainRn6,776 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 ensGene,20 ensGene,118 ensGene,123 ensGene,129 ensGene,140 est,232 est,281 gap,53 genscan,27 genscan,52 gold,53 intronEst,313 intronEst,362 mrna,178 mrna,227 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netGalGal3,330 netGalGal3,356 netGalGal3,459 netGalGal3,473 netGalGal3,523 netGalGal3,528 netGalGal3,543 netGalGal3,776 netGalVar1,341 netGalVar1,367 netGalVar1,470 netGalVar1,484 netGalVar1,534 netGalVar1,539 netGalVar1,554 netGalVar1,791 netHg19,327 netHg19,353 netHg19,456 netHg19,470 netHg19,520 netHg19,525 netHg19,540 netHg19,773 netMm10,327 netMm10,353 netMm10,456 netMm10,470 netMm10,520 netMm10,525 netMm10,540 netMm10,773 netMm39,327 netMm39,353 netMm39,456 netMm39,470 netMm39,520 netMm39,525 netMm39,540 netMm39,773 netMonDom4,327 netMonDom4,353 netMonDom4,456 netMonDom4,470 netMonDom4,520 netMonDom4,525 netMonDom4,540 netMonDom4,773 netOryCun2,327 netOryCun2,353 netOryCun2,456 netOryCun2,470 netOryCun2,520 netOryCun2,525 netOryCun2,540 netOryCun2,773 netRn6,330 netRn6,356 netRn6,459 netRn6,473 netRn6,523 netRn6,528 netRn6,543 netRn6,776 nscanGene,104 refGene,73 refGene,385 refSeqComposite,132 refSeqComposite,182 refSeqComposite,239 refSeqComposite,253 refSeqComposite,361 refSeqComposite,517 refSeqComposite,570 refSeqComposite,976 refSeqComposite,1120 refSeqComposite,1601 refSeqComposite,1643 refSeqComposite,1681 refSeqComposite,1706 refSeqComposite,1775 rmsk,74 tRNAs,269 transMapEnsemblV5,570 transMapEnsemblV5,807 transMapEstV5,539 transMapEstV5,776 transMapRefSeqV5,539 transMapRefSeqV5,776 transMapRnaV5,539 transMapRnaV5,776 transMapV5,103 transMapV5,645 transMapV5,882 uniprot,19 uniprot,61 uniprot,129 uniprot,172 uniprot,232 uniprot,443 uniprot,482 uniprot,648 uniprot,728 uniprot,772 uniprot,809 uniprot,859 uniprot,1035 uniprot,1139 uniprot,1176 uniprot,1366 uniprot,1446 uniprot,1534 uniprot,1558 uniprot,1567 uniprot,1581 uniprot,1605 uniprot,1887 uniprot,2039 xenoMrna,252 xenoMrna,301 xenoRefGene,345 once est,266 intronEst,347 mrna,212 uniprot,647 xenoMrna,286 one augustusGene,169 chainGalGal3,192 chainGalGal3,364 chainGalGal3,510 chainGalGal3,803 chainGalGal3,899 chainGalVar1,200 chainGalVar1,375 chainGalVar1,521 chainGalVar1,818 chainGalVar1,914 chainHg19,190 chainHg19,361 chainHg19,507 chainHg19,800 chainHg19,896 chainMm10,190 chainMm10,361 chainMm10,507 chainMm10,800 chainMm10,896 chainMm39,190 chainMm39,361 chainMm39,507 chainMm39,800 chainMm39,896 chainMonDom4,190 chainMonDom4,361 chainMonDom4,507 chainMonDom4,800 chainMonDom4,896 chainNetGalGal3,195 chainNetGalGal3,367 chainNetGalGal3,513 chainNetGalGal3,806 chainNetGalGal3,902 chainNetGalVar1,203 chainNetGalVar1,378 chainNetGalVar1,524 chainNetGalVar1,821 chainNetGalVar1,917 chainNetHg19,193 chainNetHg19,364 chainNetHg19,510 chainNetHg19,803 chainNetHg19,899 chainNetMm10,192 chainNetMm10,363 chainNetMm10,509 chainNetMm10,802 chainNetMm10,898 chainNetMm39,193 chainNetMm39,364 chainNetMm39,510 chainNetMm39,803 chainNetMm39,899 chainNetMonDom4,193 chainNetMonDom4,364 chainNetMonDom4,510 chainNetMonDom4,803 chainNetMonDom4,899 chainNetOryCun2,193 chainNetOryCun2,364 chainNetOryCun2,510 chainNetOryCun2,803 chainNetOryCun2,899 chainNetRn6,195 chainNetRn6,367 chainNetRn6,513 chainNetRn6,806 chainNetRn6,902 chainOryCun2,190 chainOryCun2,361 chainOryCun2,507 chainOryCun2,800 chainOryCun2,896 chainRn6,192 chainRn6,364 chainRn6,510 chainRn6,803 chainRn6,899 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 est,173 est,284 est,317 intronEst,69 intronEst,254 intronEst,365 intronEst,398 mrna,119 mrna,230 mrna,263 netGalGal3,192 netGalGal3,364 netGalGal3,510 netGalGal3,803 netGalGal3,899 netGalVar1,200 netGalVar1,375 netGalVar1,521 netGalVar1,818 netGalVar1,914 netHg19,190 netHg19,361 netHg19,507 netHg19,800 netHg19,896 netMm10,190 netMm10,361 netMm10,507 netMm10,800 netMm10,896 netMm39,190 netMm39,361 netMm39,507 netMm39,800 netMm39,896 netMonDom4,190 netMonDom4,361 netMonDom4,507 netMonDom4,800 netMonDom4,896 netOryCun2,190 netOryCun2,361 netOryCun2,507 netOryCun2,800 netOryCun2,896 netRn6,192 netRn6,364 netRn6,510 netRn6,803 netRn6,899 transMapV5,78 uniprot,74 uniprot,77 uniprot,155 uniprot,981 uniprot,1098 uniprot,1638 xenoMrna,193 xenoMrna,304 xenoMrna,337 ones transMapEnsemblV5,50 uniprot,1041 ongoing uniprot,1569 only chainGalGal3,360 chainGalVar1,371 chainHg19,357 chainMm10,357 chainMm39,357 chainMonDom4,357 chainNetGalGal3,363 chainNetGalVar1,374 chainNetHg19,360 chainNetMm10,359 chainNetMm39,360 chainNetMonDom4,360 chainNetOryCun2,360 chainNetRn6,363 chainOryCun2,357 chainRn6,360 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 est,157 est,297 est,370 est,403 est,701 intronEst,238 intronEst,378 intronEst,451 intronEst,484 intronEst,782 microsat,61 mrna,103 mrna,243 mrna,316 mrna,417 netGalGal3,360 netGalVar1,371 netHg19,357 netMm10,357 netMm39,357 netMonDom4,357 netOryCun2,357 netRn6,360 refGene,249 refGene,295 refSeqComposite,158 refSeqComposite,218 refSeqComposite,235 refSeqComposite,247 refSeqComposite,516 refSeqComposite,568 refSeqComposite,1266 refSeqComposite,1538 transMapEnsemblV5,49 transMapEnsemblV5,653 transMapEstV5,622 transMapRefSeqV5,622 transMapRnaV5,622 transMapV5,728 uniprot,645 uniprot,975 uniprot,1178 uniprot,1302 uniprot,1804 xenoMrna,177 xenoMrna,317 xenoMrna,390 xenoMrna,490 xenoRefGene,210 xenoRefGene,256 oommen transMapEnsemblV5,731 transMapEstV5,700 transMapRefSeqV5,700 transMapRnaV5,700 transMapV5,806 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opossum chainMonDom4,1 chainMonDom4,3 chainMonDom4,65 chainMonDom4,97 chainMonDom4,150 chainMonDom4,270 chainMonDom4,297 chainMonDom4,578 chainMonDom4,627 chainNetMonDom4,1 chainNetMonDom4,4 chainNetMonDom4,68 chainNetMonDom4,100 chainNetMonDom4,153 chainNetMonDom4,273 chainNetMonDom4,300 chainNetMonDom4,581 chainNetMonDom4,630 chainNetMonDom4Viewchain,2 chainNetMonDom4Viewnet,2 netMonDom4,1 netMonDom4,3 netMonDom4,65 netMonDom4,97 netMonDom4,150 netMonDom4,270 netMonDom4,297 netMonDom4,578 netMonDom4,627 opposite chainGalGal3,555 chainGalVar1,566 chainHg19,552 chainMm10,552 chainMm39,552 chainMonDom4,552 chainNetGalGal3,558 chainNetGalVar1,569 chainNetHg19,555 chainNetMm10,554 chainNetMm39,555 chainNetMonDom4,555 chainNetOryCun2,555 chainNetRn6,558 chainOryCun2,552 chainRn6,555 netGalGal3,555 netGalVar1,566 netHg19,552 netMm10,552 netMm39,552 netMonDom4,552 netOryCun2,552 netRn6,555 option augustusGene,167 augustusGene,187 est,416 genscan,94 intronEst,497 mrna,353 refGene,153 refGene,205 refSeqComposite,777 refSeqComposite,842 transMapEnsemblV5,135 transMapEstV5,104 transMapRefSeqV5,104 transMapRnaV5,104 transMapV5,210 xenoMrna,427 xenoRefGene,114 xenoRefGene,166 optional refGene,183 refSeqComposite,820 xenoRefGene,144 options est,445 gc5Base,70 genscan,85 intronEst,526 mrna,384 quality,84 xenoMrna,458 or HLTOGAannotvHg38v1,39 HLTOGAannotvHg38v1,96 HLTOGAannotvHg38v1,264 blastHg18KG,198 chainGalGal3,31 chainGalGal3,131 chainGalGal3,154 chainGalGal3,187 chainGalGal3,494 chainGalGal3,871 chainGalGal3,900 chainGalVar1,34 chainGalVar1,137 chainGalVar1,162 chainGalVar1,195 chainGalVar1,505 chainGalVar1,886 chainGalVar1,915 chainHg19,30 chainHg19,129 chainHg19,152 chainHg19,185 chainHg19,491 chainHg19,868 chainHg19,897 chainMm10,30 chainMm10,129 chainMm10,152 chainMm10,185 chainMm10,491 chainMm10,868 chainMm10,897 chainMm39,30 chainMm39,129 chainMm39,152 chainMm39,185 chainMm39,491 chainMm39,868 chainMm39,897 chainMonDom4,30 chainMonDom4,129 chainMonDom4,152 chainMonDom4,185 chainMonDom4,491 chainMonDom4,868 chainMonDom4,897 chainNetGalGal3,34 chainNetGalGal3,134 chainNetGalGal3,157 chainNetGalGal3,190 chainNetGalGal3,497 chainNetGalGal3,874 chainNetGalGal3,903 chainNetGalVar1,37 chainNetGalVar1,140 chainNetGalVar1,165 chainNetGalVar1,198 chainNetGalVar1,508 chainNetGalVar1,889 chainNetGalVar1,918 chainNetHg19,33 chainNetHg19,132 chainNetHg19,155 chainNetHg19,188 chainNetHg19,494 chainNetHg19,871 chainNetHg19,900 chainNetMm10,32 chainNetMm10,131 chainNetMm10,154 chainNetMm10,187 chainNetMm10,493 chainNetMm10,870 chainNetMm10,899 chainNetMm39,33 chainNetMm39,132 chainNetMm39,155 chainNetMm39,188 chainNetMm39,494 chainNetMm39,871 chainNetMm39,900 chainNetMonDom4,33 chainNetMonDom4,132 chainNetMonDom4,155 chainNetMonDom4,188 chainNetMonDom4,494 chainNetMonDom4,871 chainNetMonDom4,900 chainNetOryCun2,33 chainNetOryCun2,132 chainNetOryCun2,155 chainNetOryCun2,188 chainNetOryCun2,494 chainNetOryCun2,871 chainNetOryCun2,900 chainNetRn6,34 chainNetRn6,134 chainNetRn6,157 chainNetRn6,190 chainNetRn6,497 chainNetRn6,874 chainNetRn6,903 chainOryCun2,30 chainOryCun2,129 chainOryCun2,152 chainOryCun2,185 chainOryCun2,491 chainOryCun2,868 chainOryCun2,897 chainRn6,31 chainRn6,131 chainRn6,154 chainRn6,187 chainRn6,494 chainRn6,871 chainRn6,900 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 ensGene,68 ensGene,89 ensGene,110 est,174 est,309 est,328 est,337 est,402 est,480 est,512 est,526 intronEst,255 intronEst,390 intronEst,409 intronEst,418 intronEst,483 intronEst,561 intronEst,593 intronEst,607 mrna,120 mrna,255 mrna,274 mrna,283 ncbiRefSeqCurated,11 ncbiRefSeqOther,13 ncbiRefSeqPredicted,9 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netGalGal3,31 netGalGal3,131 netGalGal3,154 netGalGal3,187 netGalGal3,494 netGalGal3,871 netGalGal3,900 netGalVar1,34 netGalVar1,137 netGalVar1,162 netGalVar1,195 netGalVar1,505 netGalVar1,886 netGalVar1,915 netHg19,30 netHg19,129 netHg19,152 netHg19,185 netHg19,491 netHg19,868 netHg19,897 netMm10,30 netMm10,129 netMm10,152 netMm10,185 netMm10,491 netMm10,868 netMm10,897 netMm39,30 netMm39,129 netMm39,152 netMm39,185 netMm39,491 netMm39,868 netMm39,897 netMonDom4,30 netMonDom4,129 netMonDom4,152 netMonDom4,185 netMonDom4,491 netMonDom4,868 netMonDom4,897 netOryCun2,30 netOryCun2,129 netOryCun2,152 netOryCun2,185 netOryCun2,491 netOryCun2,868 netOryCun2,897 netRn6,31 netRn6,131 netRn6,154 netRn6,187 netRn6,494 netRn6,871 netRn6,900 refGene,63 refGene,171 refSeqComposite,86 refSeqComposite,122 refSeqComposite,228 refSeqComposite,280 refSeqComposite,355 refSeqComposite,401 refSeqComposite,410 refSeqComposite,416 refSeqComposite,425 refSeqComposite,623 refSeqComposite,644 refSeqComposite,692 refSeqComposite,783 refSeqComposite,793 refSeqComposite,808 refSeqComposite,952 refSeqComposite,974 refSeqComposite,1053 refSeqComposite,1315 refSeqComposite,1330 refSeqComposite,1497 refSeqComposite,1519 rmsk,251 rmsk,280 tRNAs,183 tRNAs,211 tRNAs,235 tRNAs,300 transMapEnsemblV5,19 transMapEnsemblV5,534 transMapEnsemblV5,562 transMapEnsemblV5,605 transMapEnsemblV5,625 transMapEstV5,503 transMapEstV5,531 transMapEstV5,574 transMapEstV5,594 transMapRefSeqV5,503 transMapRefSeqV5,531 transMapRefSeqV5,574 transMapRefSeqV5,594 transMapRnaV5,503 transMapRnaV5,531 transMapRnaV5,574 transMapRnaV5,594 transMapV5,47 transMapV5,609 transMapV5,637 transMapV5,680 transMapV5,700 uniprot,317 uniprot,389 uniprot,436 uniprot,829 uniprot,888 uniprot,982 uniprot,1038 uniprot,1205 uniprot,1266 uniprot,1401 uniprot,1449 uniprot,1722 uniprot,1776 uniprot,1835 uniprot,1879 xenoMrna,94 xenoMrna,194 xenoMrna,329 xenoMrna,348 xenoMrna,357 xenoRefGene,132 order gap,47 gold,41 gold,101 tRNAs,250 uniprot,872 ordered gap,134 organ est,198 est,204 intronEst,279 intronEst,285 mrna,144 mrna,150 xenoMrna,218 xenoMrna,224 organism chainGalGal3,339 chainGalGal3,369 chainGalVar1,350 chainGalVar1,380 chainHg19,336 chainHg19,366 chainMm10,336 chainMm10,366 chainMm39,336 chainMm39,366 chainMonDom4,336 chainMonDom4,366 chainNetGalGal3,342 chainNetGalGal3,372 chainNetGalVar1,353 chainNetGalVar1,383 chainNetHg19,339 chainNetHg19,369 chainNetMm10,338 chainNetMm10,368 chainNetMm39,339 chainNetMm39,369 chainNetMonDom4,339 chainNetMonDom4,369 chainNetOryCun2,339 chainNetOryCun2,369 chainNetRn6,342 chainNetRn6,372 chainOryCun2,336 chainOryCun2,366 chainRn6,339 chainRn6,369 netGalGal3,339 netGalGal3,369 netGalVar1,350 netGalVar1,380 netHg19,336 netHg19,366 netMm10,336 netMm10,366 netMm39,336 netMm39,366 netMonDom4,336 netMonDom4,366 netOryCun2,336 netOryCun2,366 netRn6,339 netRn6,369 organism-specific blastHg18KG,92 organisms chainGalGal3,916 chainGalVar1,931 chainHg19,913 chainMm10,913 chainMm39,913 chainMonDom4,913 chainNetGalGal3,919 chainNetGalVar1,934 chainNetHg19,916 chainNetMm10,915 chainNetMm39,916 chainNetMonDom4,916 chainNetOryCun2,916 chainNetRn6,919 chainOryCun2,913 chainRn6,916 nestedRepeats,295 netGalGal3,916 netGalVar1,931 netHg19,913 netMm10,913 netMm39,913 netMonDom4,913 netOryCun2,913 netRn6,916 rmsk,302 transMapEnsemblV5,160 transMapEnsemblV5,218 transMapEstV5,129 transMapEstV5,187 transMapRefSeqV5,129 transMapRefSeqV5,187 transMapRnaV5,129 transMapRnaV5,187 transMapV5,65 transMapV5,153 transMapV5,235 transMapV5,293 uniprot,998 xenoMrna,26 xenoRefGene,21 organized refSeqComposite,1378 organizes chainGalGal3,624 chainGalVar1,637 chainHg19,621 chainMm10,621 chainMm39,621 chainMonDom4,621 chainNetGalGal3,627 chainNetGalVar1,640 chainNetHg19,624 chainNetMm10,623 chainNetMm39,624 chainNetMonDom4,624 chainNetOryCun2,624 chainNetRn6,627 chainOryCun2,621 chainRn6,624 netGalGal3,624 netGalVar1,637 netHg19,621 netMm10,621 netMm39,621 netMonDom4,621 netOryCun2,621 netRn6,624 orientation chainGalGal3,556 chainGalVar1,567 chainHg19,553 chainMm10,553 chainMm39,553 chainMonDom4,553 chainNetGalGal3,559 chainNetGalVar1,570 chainNetHg19,556 chainNetMm10,555 chainNetMm39,556 chainNetMonDom4,556 chainNetOryCun2,556 chainNetRn6,559 chainOryCun2,553 chainRn6,556 cytoBandIdeo,6 gap,49 gold,42 gold,103 netGalGal3,556 netGalVar1,567 netHg19,553 netMm10,553 netMm39,553 netMonDom4,553 netOryCun2,553 netRn6,556 xenoMrna,75 xenoMrna,97 orientations xenoMrna,107 oriented gap,136 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 orthologous HLTOGAannotvHg38v1,121 transMapEnsemblV5,87 transMapEstV5,56 transMapRefSeqV5,56 transMapRnaV5,56 transMapV5,57 orthologs HLTOGAannotvHg38v1,20 HLTOGAannotvHg38v1,33 HLTOGAannotvHg38v1,93 chainGalGal3,292 chainGalVar1,302 chainHg19,290 chainMm10,290 chainMm39,290 chainMonDom4,290 chainNetGalGal3,295 chainNetGalVar1,305 chainNetHg19,293 chainNetMm10,292 chainNetMm39,293 chainNetMonDom4,293 chainNetOryCun2,293 chainNetRn6,295 chainOryCun2,290 chainRn6,292 netGalGal3,292 netGalVar1,302 netHg19,290 netMm10,290 netMm39,290 netMonDom4,290 netOryCun2,290 netRn6,292 transMapV5,95 orthology HLTOGAannotvHg38v1,303 HLTOGAannotvHg38v1,360 orycun2 chainNetOryCun2,8 chainNetOryCun2,72 chainNetOryCun2,312 chainNetOryCun2Viewchain,6 chainNetOryCun2Viewnet,6 chainOryCun2,7 chainOryCun2,69 chainOryCun2,309 netOryCun2,7 netOryCun2,69 netOryCun2,309 osipova HLTOGAannotvHg38v1,338 ostell est,757 est,781 intronEst,841 intronEst,865 mrna,474 mrna,498 xenoMrna,548 xenoMrna,572 other augustusGene,208 chainGalGal3,25 chainGalGal3,421 chainGalGal3,514 chainGalVar1,28 chainGalVar1,432 chainGalVar1,525 chainHg19,24 chainHg19,418 chainHg19,511 chainMm10,24 chainMm10,418 chainMm10,511 chainMm39,24 chainMm39,418 chainMm39,511 chainMonDom4,24 chainMonDom4,418 chainMonDom4,511 chainNetGalGal3,28 chainNetGalGal3,424 chainNetGalGal3,517 chainNetGalVar1,31 chainNetGalVar1,435 chainNetGalVar1,528 chainNetHg19,27 chainNetHg19,421 chainNetHg19,514 chainNetMm10,26 chainNetMm10,420 chainNetMm10,513 chainNetMm39,27 chainNetMm39,421 chainNetMm39,514 chainNetMonDom4,27 chainNetMonDom4,421 chainNetMonDom4,514 chainNetOryCun2,27 chainNetOryCun2,421 chainNetOryCun2,514 chainNetRn6,28 chainNetRn6,424 chainNetRn6,517 chainOryCun2,24 chainOryCun2,418 chainOryCun2,511 chainRn6,25 chainRn6,421 chainRn6,514 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 ncbiRefSeqOther,2 ncbiRefSeqOther,5 nestedRepeats,376 netGalGal3,25 netGalGal3,421 netGalGal3,514 netGalVar1,28 netGalVar1,432 netGalVar1,525 netHg19,24 netHg19,418 netHg19,511 netMm10,24 netMm10,418 netMm10,511 netMm39,24 netMm39,418 netMm39,511 netMonDom4,24 netMonDom4,418 netMonDom4,511 netOryCun2,24 netOryCun2,418 netOryCun2,511 netRn6,25 netRn6,421 netRn6,514 refSeqComposite,275 refSeqComposite,379 refSeqComposite,382 refSeqComposite,1372 refSeqComposite,1398 rmsk,195 rmsk,399 tRNAs,243 transMapEnsemblV5,30 transMapEnsemblV5,46 transMapEnsemblV5,371 transMapEstV5,28 transMapEstV5,340 transMapRefSeqV5,28 transMapRefSeqV5,340 transMapRnaV5,28 transMapRnaV5,340 transMapV5,27 transMapV5,446 unipOther,1 unipOther,4 uniprot,90 uniprot,122 uniprot,205 uniprot,319 uniprot,393 uniprot,396 uniprot,862 uniprot,1200 xenoMrna,1 xenoMrna,27 xenoRefGene,1 xenoRefGene,22 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 uniprot,1312 uniprot,1344 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 est,682 intronEst,763 transMapEnsemblV5,248 transMapEstV5,217 transMapRefSeqV5,217 transMapRnaV5,217 transMapV5,323 ottonello tRNAs,478 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 ensGene,26 ensGene,84 ensGene,91 ensGene,113 ensGene,124 ensGene,130 ensGene,141 genscan,58 refGene,79 refSeqComposite,138 refSeqComposite,1326 refSeqComposite,1333 refSeqComposite,1349 refSeqComposite,1364 refSeqComposite,1488 refSeqComposite,1508 refSeqComposite,1629 refSeqComposite,1682 refSeqComposite,1689 refSeqComposite,1707 rmsk,124 rmsk,129 transMapEnsemblV5,559 transMapEnsemblV5,565 transMapEnsemblV5,575 transMapEnsemblV5,614 transMapEstV5,528 transMapEstV5,534 transMapEstV5,544 transMapEstV5,583 transMapRefSeqV5,528 transMapRefSeqV5,534 transMapRefSeqV5,544 transMapRefSeqV5,583 transMapRnaV5,528 transMapRnaV5,534 transMapRnaV5,544 transMapRnaV5,583 transMapV5,634 transMapV5,640 transMapV5,650 transMapV5,689 uniprot,891 uniprot,1697 uniprot,1765 uniprot,1829 uniprot,1836 uniprot,1870 uniprot,1874 out chainGalGal3,645 chainGalVar1,660 chainHg19,642 chainMm10,642 chainMm39,642 chainMonDom4,642 chainNetGalGal3,648 chainNetGalVar1,663 chainNetHg19,645 chainNetMm10,644 chainNetMm39,645 chainNetMonDom4,645 chainNetOryCun2,645 chainNetRn6,648 chainOryCun2,642 chainRn6,645 netGalGal3,645 netGalVar1,660 netHg19,642 netMm10,642 netMm39,642 netMonDom4,642 netOryCun2,642 netRn6,645 quality,43 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 windowmaskerSdust,63 windowmaskerSdust,72 outputs rmsk,35 outside est,617 intronEst,698 refSeqComposite,690 uniprot,558 over blastHg18KG,106 blastHg18KG,120 chainGalGal3,200 chainGalGal3,660 chainGalVar1,208 chainGalVar1,675 chainHg19,198 chainHg19,657 chainMm10,198 chainMm10,657 chainMm39,198 chainMm39,657 chainMonDom4,198 chainMonDom4,657 chainNetGalGal3,203 chainNetGalGal3,663 chainNetGalVar1,211 chainNetGalVar1,678 chainNetHg19,201 chainNetHg19,660 chainNetMm10,200 chainNetMm10,659 chainNetMm39,201 chainNetMm39,660 chainNetMonDom4,201 chainNetMonDom4,660 chainNetOryCun2,201 chainNetOryCun2,660 chainNetRn6,203 chainNetRn6,663 chainOryCun2,198 chainOryCun2,657 chainRn6,200 chainRn6,660 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netGalGal3,200 netGalGal3,660 netGalVar1,208 netGalVar1,675 netHg19,198 netHg19,657 netMm10,198 netMm10,657 netMm39,198 netMm39,657 netMonDom4,198 netMonDom4,657 netOryCun2,198 netOryCun2,657 netRn6,200 netRn6,660 refSeqComposite,1035 uniprot,522 uniprot,536 overlapping chainGalGal3,116 chainGalGal3,180 chainGalVar1,122 chainGalVar1,188 chainHg19,114 chainHg19,178 chainMm10,114 chainMm10,178 chainMm39,114 chainMm39,178 chainMonDom4,114 chainMonDom4,178 chainNetGalGal3,119 chainNetGalGal3,183 chainNetGalVar1,125 chainNetGalVar1,191 chainNetHg19,117 chainNetHg19,181 chainNetMm10,116 chainNetMm10,180 chainNetMm39,117 chainNetMm39,181 chainNetMonDom4,117 chainNetMonDom4,181 chainNetOryCun2,117 chainNetOryCun2,181 chainNetRn6,119 chainNetRn6,183 chainOryCun2,114 chainOryCun2,178 chainRn6,116 chainRn6,180 gap,123 netGalGal3,116 netGalGal3,180 netGalVar1,122 netGalVar1,188 netHg19,114 netHg19,178 netMm10,114 netMm10,178 netMm39,114 netMm39,178 netMonDom4,114 netMonDom4,178 netOryCun2,114 netOryCun2,178 netRn6,116 netRn6,180 own uniprot,724 p genscan,205 nestedRepeats,329 nscanGene,340 rmsk,352 pac chainGalGal3,1044 chainGalVar1,1059 chainHg19,1041 chainMm10,1041 chainMm39,1041 chainMonDom4,1041 chainNetGalGal3,1047 chainNetGalVar1,1062 chainNetHg19,1044 chainNetMm10,1043 chainNetMm39,1044 chainNetMonDom4,1044 chainNetOryCun2,1044 chainNetRn6,1047 chainOryCun2,1041 chainRn6,1044 netGalGal3,1044 netGalVar1,1059 netHg19,1041 netMm10,1041 netMm39,1041 netMonDom4,1041 netOryCun2,1041 netRn6,1044 pack chainGalGal3,237 chainGalVar1,245 chainHg19,235 chainMm10,235 chainMm39,235 chainMonDom4,235 chainNetGalGal3,240 chainNetGalVar1,248 chainNetHg19,238 chainNetMm10,237 chainNetMm39,238 chainNetMonDom4,238 chainNetOryCun2,238 chainNetRn6,240 chainOryCun2,235 chainRn6,237 nestedRepeats,116 netGalGal3,237 netGalVar1,245 netHg19,235 netMm10,235 netMm39,235 netMonDom4,235 netOryCun2,235 netRn6,237 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 ensGene,127 ensGene,166 est,113 est,425 est,446 genscan,78 genscan,123 intronEst,194 intronEst,506 intronEst,527 mrna,59 mrna,364 mrna,385 refGene,55 refGene,139 refGene,230 refSeqComposite,114 refSeqComposite,742 refSeqComposite,867 refSeqComposite,1127 refSeqComposite,1646 rmsk,77 uniprot,236 uniprot,651 uniprot,1158 uniprot,1585 uniprot,2027 xenoMrna,133 xenoMrna,438 xenoMrna,459 xenoRefGene,100 xenoRefGene,191 pages chainGalGal3,781 chainGalVar1,796 chainHg19,778 chainMm10,778 chainMm39,778 chainMonDom4,778 chainNetGalGal3,784 chainNetGalVar1,799 chainNetHg19,781 chainNetMm10,780 chainNetMm39,781 chainNetMonDom4,781 chainNetOryCun2,781 chainNetRn6,784 chainOryCun2,778 chainRn6,781 netGalGal3,781 netGalVar1,796 netHg19,778 netMm10,778 netMm39,778 netMonDom4,778 netOryCun2,778 netRn6,781 pair gap,63 gap,154 nscanGene,67 paired-end gap,144 gold,54 pairwise chainGalGal3,1022 chainGalGal3,1040 chainGalVar1,1037 chainGalVar1,1055 chainHg19,1019 chainHg19,1037 chainMm10,1019 chainMm10,1037 chainMm39,1019 chainMm39,1037 chainMonDom4,1019 chainMonDom4,1037 chainNetGalGal3,1025 chainNetGalGal3,1043 chainNetGalVar1,1040 chainNetGalVar1,1058 chainNetHg19,1022 chainNetHg19,1040 chainNetMm10,1021 chainNetMm10,1039 chainNetMm39,1022 chainNetMm39,1040 chainNetMonDom4,1022 chainNetMonDom4,1040 chainNetOryCun2,1022 chainNetOryCun2,1040 chainNetRn6,1025 chainNetRn6,1043 chainOryCun2,1019 chainOryCun2,1037 chainRn6,1022 chainRn6,1040 netGalGal3,1022 netGalGal3,1040 netGalVar1,1037 netGalVar1,1055 netHg19,1019 netHg19,1037 netMm10,1019 netMm10,1037 netMm39,1019 netMm39,1037 netMonDom4,1019 netMonDom4,1037 netOryCun2,1019 netOryCun2,1037 netRn6,1022 netRn6,1040 transMapEnsemblV5,339 transMapEstV5,308 transMapRefSeqV5,308 transMapRnaV5,308 transMapV5,84 transMapV5,414 paradigm HLTOGAannotvHg38v1,76 paralogous transMapEnsemblV5,302 transMapEstV5,271 transMapRefSeqV5,271 transMapRnaV5,271 transMapV5,377 paralogs HLTOGAannotvHg38v1,95 chainGalGal3,230 chainGalVar1,238 chainHg19,228 chainMm10,228 chainMm39,228 chainMonDom4,228 chainNetGalGal3,233 chainNetGalVar1,241 chainNetHg19,231 chainNetMm10,230 chainNetMm39,231 chainNetMonDom4,231 chainNetOryCun2,231 chainNetRn6,233 chainOryCun2,228 chainRn6,230 netGalGal3,230 netGalVar1,238 netHg19,228 netMm10,228 netMm39,228 netMonDom4,228 netOryCun2,228 netRn6,230 transMapV5,161 parameters windowmaskerSdust,57 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 part blastHg18KG,142 chainGalGal3,278 chainGalVar1,288 chainHg19,276 chainMm10,276 chainMm39,276 chainMonDom4,276 chainNetGalGal3,281 chainNetGalVar1,291 chainNetHg19,279 chainNetMm10,278 chainNetMm39,279 chainNetMonDom4,279 chainNetOryCun2,279 chainNetRn6,281 chainOryCun2,276 chainRn6,278 netGalGal3,278 netGalVar1,288 netHg19,276 netMm10,276 netMm39,276 netMonDom4,276 netOryCun2,276 netRn6,278 quality,92 refSeqComposite,527 partially HLTOGAannotvHg38v1,165 particular augustusGene,234 chainGalGal3,202 chainGalVar1,210 chainHg19,200 chainMm10,200 chainMm39,200 chainMonDom4,200 chainNetGalGal3,205 chainNetGalVar1,213 chainNetHg19,203 chainNetMm10,202 chainNetMm39,203 chainNetMonDom4,203 chainNetOryCun2,203 chainNetRn6,205 chainOryCun2,200 chainRn6,202 netGalGal3,202 netGalVar1,210 netHg19,200 netMm10,200 netMm39,200 netMonDom4,200 netOryCun2,200 netRn6,202 refSeqComposite,297 uniprot,1019 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts HLTOGAannotvHg38v1,200 chainGalGal3,40 chainGalGal3,51 chainGalVar1,43 chainGalVar1,54 chainHg19,39 chainHg19,50 chainMm10,39 chainMm10,50 chainMm39,39 chainMm39,50 chainMonDom4,39 chainMonDom4,50 chainNetGalGal3,43 chainNetGalGal3,54 chainNetGalVar1,46 chainNetGalVar1,57 chainNetHg19,42 chainNetHg19,53 chainNetMm10,41 chainNetMm10,52 chainNetMm39,42 chainNetMm39,53 chainNetMonDom4,42 chainNetMonDom4,53 chainNetOryCun2,42 chainNetOryCun2,53 chainNetRn6,43 chainNetRn6,54 chainOryCun2,39 chainOryCun2,50 chainRn6,40 chainRn6,51 netGalGal3,40 netGalGal3,51 netGalVar1,43 netGalVar1,54 netHg19,39 netHg19,50 netMm10,39 netMm10,50 netMm39,39 netMm39,50 netMonDom4,39 netMonDom4,50 netOryCun2,39 netOryCun2,50 netRn6,40 netRn6,51 xenoMrna,70 pasa-est nscanGene,156 past uniprot,1690 patch uniprot,1423 patches uniprot,1432 patterns augustusGene,56 nscanGene,151 pavesi tRNAs,41 tRNAs,470 penalty blastHg18KG,99 pennsylvania chainGalGal3,927 chainGalGal3,1030 chainGalVar1,942 chainGalVar1,1045 chainHg19,924 chainHg19,1027 chainMm10,924 chainMm10,1027 chainMm39,924 chainMm39,1027 chainMonDom4,924 chainMonDom4,1027 chainNetGalGal3,930 chainNetGalGal3,1033 chainNetGalVar1,945 chainNetGalVar1,1048 chainNetHg19,927 chainNetHg19,1030 chainNetMm10,926 chainNetMm10,1029 chainNetMm39,927 chainNetMm39,1030 chainNetMonDom4,927 chainNetMonDom4,1030 chainNetOryCun2,927 chainNetOryCun2,1030 chainNetRn6,930 chainNetRn6,1033 chainOryCun2,924 chainOryCun2,1027 chainRn6,927 chainRn6,1030 netGalGal3,927 netGalGal3,1030 netGalVar1,942 netGalVar1,1045 netHg19,924 netHg19,1027 netMm10,924 netMm10,1027 netMm39,924 netMm39,1027 netMonDom4,924 netMonDom4,1027 netOryCun2,924 netOryCun2,1027 netRn6,927 netRn6,1030 peptide unipLocSignal,2 uniprot,477 uniprot,565 peptides blastHg18KG,21 unipLocSignal,5 uniprot,239 uniprot,512 per tRNAs,94 percent gc5Base,2 gc5Base,4 gc5Base,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5Base,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 nscanGene,213 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 est,608 intronEst,689 period microsat,65 permitted rmsk,314 perutz nscanGene,264 ph.d chainGalGal3,1027 chainGalVar1,1042 chainHg19,1024 chainMm10,1024 chainMm39,1024 chainMonDom4,1024 chainNetGalGal3,1030 chainNetGalVar1,1045 chainNetHg19,1027 chainNetMm10,1026 chainNetMm39,1027 chainNetMonDom4,1027 chainNetOryCun2,1027 chainNetRn6,1030 chainOryCun2,1024 chainRn6,1027 netGalGal3,1027 netGalVar1,1042 netHg19,1024 netMm10,1024 netMm39,1024 netMonDom4,1024 netOryCun2,1024 netRn6,1027 pharmaceuticals uniprot,1969 phenotype uniprot,432 phosphorylation uniprot,590 phylofit transMapEnsemblV5,230 transMapEstV5,199 transMapRefSeqV5,199 transMapRnaV5,199 transMapV5,305 phylogenetic nscanGene,88 pia uniprot,1971 pick uniprot,1089 pig blastHg18KG,75 blastHg18KG,85 chainGalGal3,75 chainGalGal3,102 chainGalGal3,160 chainGalGal3,207 chainGalGal3,274 chainGalGal3,282 chainGalGal3,583 chainGalGal3,636 chainGalVar1,79 chainGalVar1,108 chainGalVar1,168 chainGalVar1,215 chainGalVar1,284 chainGalVar1,292 chainGalVar1,596 chainGalVar1,651 chainHg19,73 chainHg19,100 chainHg19,158 chainHg19,205 chainHg19,272 chainHg19,280 chainHg19,580 chainHg19,633 chainMm10,73 chainMm10,100 chainMm10,158 chainMm10,205 chainMm10,272 chainMm10,280 chainMm10,580 chainMm10,633 chainMm39,73 chainMm39,100 chainMm39,158 chainMm39,205 chainMm39,272 chainMm39,280 chainMm39,580 chainMm39,633 chainMonDom4,73 chainMonDom4,100 chainMonDom4,158 chainMonDom4,205 chainMonDom4,272 chainMonDom4,280 chainMonDom4,580 chainMonDom4,633 chainNetGalGal3,78 chainNetGalGal3,105 chainNetGalGal3,163 chainNetGalGal3,210 chainNetGalGal3,277 chainNetGalGal3,285 chainNetGalGal3,586 chainNetGalGal3,639 chainNetGalVar1,82 chainNetGalVar1,111 chainNetGalVar1,171 chainNetGalVar1,218 chainNetGalVar1,287 chainNetGalVar1,295 chainNetGalVar1,599 chainNetGalVar1,654 chainNetHg19,76 chainNetHg19,103 chainNetHg19,161 chainNetHg19,208 chainNetHg19,275 chainNetHg19,283 chainNetHg19,583 chainNetHg19,636 chainNetMm10,75 chainNetMm10,102 chainNetMm10,160 chainNetMm10,207 chainNetMm10,274 chainNetMm10,282 chainNetMm10,582 chainNetMm10,635 chainNetMm39,76 chainNetMm39,103 chainNetMm39,161 chainNetMm39,208 chainNetMm39,275 chainNetMm39,283 chainNetMm39,583 chainNetMm39,636 chainNetMonDom4,76 chainNetMonDom4,103 chainNetMonDom4,161 chainNetMonDom4,208 chainNetMonDom4,275 chainNetMonDom4,283 chainNetMonDom4,583 chainNetMonDom4,636 chainNetOryCun2,76 chainNetOryCun2,103 chainNetOryCun2,161 chainNetOryCun2,208 chainNetOryCun2,275 chainNetOryCun2,283 chainNetOryCun2,583 chainNetOryCun2,636 chainNetRn6,78 chainNetRn6,105 chainNetRn6,163 chainNetRn6,210 chainNetRn6,277 chainNetRn6,285 chainNetRn6,586 chainNetRn6,639 chainOryCun2,73 chainOryCun2,100 chainOryCun2,158 chainOryCun2,205 chainOryCun2,272 chainOryCun2,280 chainOryCun2,580 chainOryCun2,633 chainRn6,75 chainRn6,102 chainRn6,160 chainRn6,207 chainRn6,274 chainRn6,282 chainRn6,583 chainRn6,636 est,2 est,5 est,19 est,647 gold,18 intronEst,4 intronEst,20 intronEst,127 intronEst,728 mrna,2 mrna,5 mrna,20 mrna,389 netGalGal3,75 netGalGal3,102 netGalGal3,160 netGalGal3,207 netGalGal3,274 netGalGal3,282 netGalGal3,583 netGalGal3,636 netGalVar1,79 netGalVar1,108 netGalVar1,168 netGalVar1,215 netGalVar1,284 netGalVar1,292 netGalVar1,596 netGalVar1,651 netHg19,73 netHg19,100 netHg19,158 netHg19,205 netHg19,272 netHg19,280 netHg19,580 netHg19,633 netMm10,73 netMm10,100 netMm10,158 netMm10,205 netMm10,272 netMm10,280 netMm10,580 netMm10,633 netMm39,73 netMm39,100 netMm39,158 netMm39,205 netMm39,272 netMm39,280 netMm39,580 netMm39,633 netMonDom4,73 netMonDom4,100 netMonDom4,158 netMonDom4,205 netMonDom4,272 netMonDom4,280 netMonDom4,580 netMonDom4,633 netOryCun2,73 netOryCun2,100 netOryCun2,158 netOryCun2,205 netOryCun2,272 netOryCun2,280 netOryCun2,580 netOryCun2,633 netRn6,75 netRn6,102 netRn6,160 netRn6,207 netRn6,274 netRn6,282 netRn6,583 netRn6,636 nscanGene,106 nscanGene,181 quality,4 quality,96 refGene,23 refGene,264 refSeqComposite,20 refSeqComposite,443 refSeqComposite,465 refSeqComposite,499 refSeqComposite,1235 transMapEnsemblV5,91 transMapEnsemblV5,204 transMapEnsemblV5,335 transMapEstV5,60 transMapEstV5,173 transMapEstV5,304 transMapRefSeqV5,60 transMapRefSeqV5,173 transMapRefSeqV5,304 transMapRnaV5,60 transMapRnaV5,173 transMapRnaV5,304 transMapV5,61 transMapV5,279 transMapV5,410 xenoMrna,4 xenoMrna,30 xenoMrna,468 xenoRefGene,4 xenoRefGene,25 xenoRefGene,225 pipeline refSeqComposite,1193 uniprot,1537 pipelines uniprot,1850 place chainGalGal3,800 chainGalVar1,815 chainHg19,797 chainMm10,797 chainMm39,797 chainMonDom4,797 chainNetGalGal3,803 chainNetGalVar1,818 chainNetHg19,800 chainNetMm10,799 chainNetMm39,800 chainNetMonDom4,800 chainNetOryCun2,800 chainNetRn6,803 chainOryCun2,797 chainRn6,800 netGalGal3,800 netGalVar1,815 netHg19,797 netMm10,797 netMm39,797 netMonDom4,797 netOryCun2,797 netRn6,800 placed chainGalGal3,842 chainGalVar1,857 chainHg19,839 chainMm10,839 chainMm39,839 chainMonDom4,839 chainNetGalGal3,845 chainNetGalVar1,860 chainNetHg19,842 chainNetMm10,841 chainNetMm39,842 chainNetMonDom4,842 chainNetOryCun2,842 chainNetRn6,845 chainOryCun2,839 chainRn6,842 netGalGal3,842 netGalVar1,857 netHg19,839 netMm10,839 netMm39,839 netMonDom4,839 netOryCun2,839 netRn6,842 placement refSeqComposite,968 places est,691 intronEst,772 mrna,407 refGene,285 refSeqComposite,1256 xenoMrna,480 xenoRefGene,246 plasmid est,469 intronEst,550 please ensGene,41 ensGene,160 refGene,45 refSeqComposite,103 refSeqComposite,1113 refSeqComposite,1686 tRNAs,278 tRNAs,282 tRNAs,361 uniprot,685 uniprot,1439 uniprot,1826 plos transMapEnsemblV5,811 transMapEstV5,780 transMapRefSeqV5,780 transMapRnaV5,780 transMapV5,886 plus refSeqComposite,902 pmc HLTOGAannotvHg38v1,373 chainGalGal3,1089 chainGalGal3,1120 chainGalVar1,1104 chainGalVar1,1135 chainHg19,1086 chainHg19,1117 chainMm10,1086 chainMm10,1117 chainMm39,1086 chainMm39,1117 chainMonDom4,1086 chainMonDom4,1117 chainNetGalGal3,1092 chainNetGalGal3,1123 chainNetGalVar1,1107 chainNetGalVar1,1138 chainNetHg19,1089 chainNetHg19,1120 chainNetMm10,1088 chainNetMm10,1119 chainNetMm39,1089 chainNetMm39,1120 chainNetMonDom4,1089 chainNetMonDom4,1120 chainNetOryCun2,1089 chainNetOryCun2,1120 chainNetRn6,1092 chainNetRn6,1123 chainOryCun2,1086 chainOryCun2,1117 chainRn6,1089 chainRn6,1120 ensGene,206 est,773 est,799 est,817 intronEst,857 intronEst,883 intronEst,901 microsat,136 mrna,490 mrna,516 mrna,534 netGalGal3,1089 netGalGal3,1120 netGalVar1,1104 netGalVar1,1135 netHg19,1086 netHg19,1117 netMm10,1086 netMm10,1117 netMm39,1086 netMm39,1117 netMonDom4,1086 netMonDom4,1117 netOryCun2,1086 netOryCun2,1117 netRn6,1089 netRn6,1120 nscanGene,335 nscanGene,383 refGene,358 refGene,400 refGene,434 refSeqComposite,1748 refSeqComposite,1790 refSeqComposite,1824 simpleRepeat,96 tRNAs,392 tRNAs,415 tRNAs,468 tRNAs,511 transMapEnsemblV5,755 transMapEnsemblV5,821 transMapEstV5,724 transMapEstV5,790 transMapRefSeqV5,724 transMapRefSeqV5,790 transMapRnaV5,724 transMapRnaV5,790 transMapV5,830 transMapV5,896 uniprot,2008 xenoMrna,564 xenoMrna,590 xenoMrna,608 xenoRefGene,318 xenoRefGene,360 xenoRefGene,394 pmc10193443 HLTOGAannotvHg38v1,374 pmc1457044 nscanGene,384 pmc146525 tRNAs,469 pmc148217 microsat,137 simpleRepeat,97 pmc187518 est,818 intronEst,902 mrna,535 refGene,359 refSeqComposite,1749 xenoMrna,609 xenoRefGene,319 pmc206470 nscanGene,336 pmc208784 chainGalGal3,1090 chainGalVar1,1105 chainHg19,1087 chainMm10,1087 chainMm39,1087 chainMonDom4,1087 chainNetGalGal3,1093 chainNetGalVar1,1108 chainNetHg19,1090 chainNetMm10,1089 chainNetMm39,1090 chainNetMonDom4,1090 chainNetOryCun2,1090 chainNetRn6,1093 chainOryCun2,1087 chainRn6,1090 netGalGal3,1090 netGalVar1,1105 netHg19,1087 netMm10,1087 netMm39,1087 netMonDom4,1087 netOryCun2,1087 netRn6,1090 pmc2099585 transMapEnsemblV5,756 transMapEstV5,725 transMapRefSeqV5,725 transMapRnaV5,725 transMapV5,831 pmc2134963 transMapEnsemblV5,822 transMapEstV5,791 transMapRefSeqV5,791 transMapRnaV5,791 transMapV5,897 pmc2686519 tRNAs,393 pmc308124 tRNAs,416 pmc308779 est,800 intronEst,884 mrna,517 xenoMrna,591 pmc3245120 uniprot,2009 pmc3531190 est,774 intronEst,858 mrna,491 xenoMrna,565 pmc3965018 refGene,401 refSeqComposite,1791 xenoRefGene,361 pmc430961 chainGalGal3,1121 chainGalVar1,1136 chainHg19,1118 chainMm10,1118 chainMm39,1118 chainMonDom4,1118 chainNetGalGal3,1124 chainNetGalVar1,1139 chainNetHg19,1121 chainNetMm10,1120 chainNetMm39,1121 chainNetMonDom4,1121 chainNetOryCun2,1121 chainNetRn6,1124 chainOryCun2,1118 chainRn6,1121 netGalGal3,1121 netGalVar1,1136 netHg19,1118 netMm10,1118 netMm39,1118 netMonDom4,1118 netOryCun2,1118 netRn6,1121 pmc523650 tRNAs,512 pmc539979 refGene,435 refSeqComposite,1825 xenoRefGene,395 pmc99161 ensGene,207 pmid HLTOGAannotvHg38v1,371 augustusGene,314 augustusGene,339 chainGalGal3,1049 chainGalGal3,1087 chainGalGal3,1118 chainGalVar1,1064 chainGalVar1,1102 chainGalVar1,1133 chainHg19,1046 chainHg19,1084 chainHg19,1115 chainMm10,1046 chainMm10,1084 chainMm10,1115 chainMm39,1046 chainMm39,1084 chainMm39,1115 chainMonDom4,1046 chainMonDom4,1084 chainMonDom4,1115 chainNetGalGal3,1052 chainNetGalGal3,1090 chainNetGalGal3,1121 chainNetGalVar1,1067 chainNetGalVar1,1105 chainNetGalVar1,1136 chainNetHg19,1049 chainNetHg19,1087 chainNetHg19,1118 chainNetMm10,1048 chainNetMm10,1086 chainNetMm10,1117 chainNetMm39,1049 chainNetMm39,1087 chainNetMm39,1118 chainNetMonDom4,1049 chainNetMonDom4,1087 chainNetMonDom4,1118 chainNetOryCun2,1049 chainNetOryCun2,1087 chainNetOryCun2,1118 chainNetRn6,1052 chainNetRn6,1090 chainNetRn6,1121 chainOryCun2,1046 chainOryCun2,1084 chainOryCun2,1115 chainRn6,1049 chainRn6,1087 chainRn6,1118 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 ensGene,204 est,771 est,797 est,815 genscan,229 intronEst,855 intronEst,881 intronEst,899 microsat,134 mrna,488 mrna,514 mrna,532 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netGalGal3,1049 netGalGal3,1087 netGalGal3,1118 netGalVar1,1064 netGalVar1,1102 netGalVar1,1133 netHg19,1046 netHg19,1084 netHg19,1115 netMm10,1046 netMm10,1084 netMm10,1115 netMm39,1046 netMm39,1084 netMm39,1115 netMonDom4,1046 netMonDom4,1084 netMonDom4,1115 netOryCun2,1046 netOryCun2,1084 netOryCun2,1115 netRn6,1049 netRn6,1087 netRn6,1118 nscanGene,289 nscanGene,333 nscanGene,358 nscanGene,381 refGene,356 refGene,398 refGene,432 refSeqComposite,1746 refSeqComposite,1788 refSeqComposite,1822 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 tRNAs,390 tRNAs,413 tRNAs,438 tRNAs,466 tRNAs,509 transMapEnsemblV5,753 transMapEnsemblV5,785 transMapEnsemblV5,819 transMapEstV5,722 transMapEstV5,754 transMapEstV5,788 transMapRefSeqV5,722 transMapRefSeqV5,754 transMapRefSeqV5,788 transMapRnaV5,722 transMapRnaV5,754 transMapRnaV5,788 transMapV5,828 transMapV5,860 transMapV5,894 uniprot,2006 uniprot,2050 windowmaskerSdust,113 xenoMrna,562 xenoMrna,588 xenoMrna,606 xenoRefGene,316 xenoRefGene,358 xenoRefGene,392 point est,551 intronEst,632 rmsk,269 poly-a augustusGene,62 est,503 est,577 intronEst,584 intronEst,658 polymorphic microsat,41 simpleRepeat,46 polypeptide unipChain,6 uniprot,287 uniprot,289 population microsat,44 position chainGalGal3,716 chainGalVar1,731 chainHg19,713 chainMm10,713 chainMm39,713 chainMonDom4,713 chainNetGalGal3,719 chainNetGalVar1,734 chainNetHg19,716 chainNetMm10,715 chainNetMm39,716 chainNetMonDom4,716 chainNetOryCun2,716 chainNetRn6,719 chainOryCun2,713 chainRn6,716 netGalGal3,716 netGalVar1,731 netHg19,713 netMm10,713 netMm39,713 netMonDom4,713 netOryCun2,713 netRn6,716 quality,31 refSeqComposite,987 uniprot,610 positions HLTOGAannotvHg38v1,109 uniprot,1495 positive tRNAs,88 possible chainGalGal3,415 chainGalVar1,426 chainHg19,412 chainMm10,412 chainMm39,412 chainMonDom4,412 chainNetGalGal3,418 chainNetGalVar1,429 chainNetHg19,415 chainNetMm10,414 chainNetMm39,415 chainNetMonDom4,415 chainNetOryCun2,415 chainNetRn6,418 chainOryCun2,412 chainRn6,415 gold,28 netGalGal3,415 netGalVar1,426 netHg19,412 netMm10,412 netMm39,412 netMonDom4,412 netOryCun2,412 netRn6,415 refSeqComposite,186 uniprot,601 possibly chainGalGal3,291 chainGalVar1,301 chainHg19,289 chainMm10,289 chainMm39,289 chainMonDom4,289 chainNetGalGal3,294 chainNetGalVar1,304 chainNetHg19,292 chainNetMm10,291 chainNetMm39,292 chainNetMonDom4,292 chainNetOryCun2,292 chainNetRn6,294 chainOryCun2,289 chainRn6,291 netGalGal3,291 netGalVar1,301 netHg19,289 netMm10,289 netMm39,289 netMonDom4,289 netOryCun2,289 netRn6,291 simpleRepeat,18 post-alignment transMapEnsemblV5,305 transMapEstV5,274 transMapRefSeqV5,274 transMapRnaV5,274 transMapV5,380 post-processing uniprot,295 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 tRNAs,422 pp tRNAs,367 pre-filters tRNAs,43 pre-mrna genscan,185 precompiled refSeqComposite,1523 transMapEnsemblV5,629 transMapEstV5,598 transMapRefSeqV5,598 transMapRnaV5,598 transMapV5,704 uniprot,1780 predicted blastHg18KG,24 blastHg18KG,38 cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 ncbiRefSeq,8 ncbiRefSeqPredicted,2 ncbiRefSeqPredicted,6 refGene,109 refSeqComposite,204 refSeqComposite,340 refSeqComposite,359 refSeqComposite,404 refSeqComposite,593 refSeqComposite,619 refSeqComposite,695 refSeqComposite,715 refSeqComposite,1416 refSeqComposite,1676 tRNAs,19 tRNAs,322 uniprot,48 uniprot,193 xenoMrna,114 xenoRefGene,70 prediction augustusGene,321 genscan,73 genscan,211 nscanGene,20 nscanGene,280 nscanGene,351 nscanGene,367 refGene,94 refSeqComposite,376 refSeqComposite,604 transMapEnsemblV5,84 transMapEstV5,53 transMapRefSeqV5,53 transMapRnaV5,53 transMapV5,54 xenoRefGene,55 predictions HLTOGAannotvHg38v1,14 augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 blastHg18KG,12 ensGene,8 ensGene,12 ensGene,40 genscan,5 genscan,9 genscan,14 genscan,24 genscan,112 genscan,118 ncbiRefSeq,18 ncbiRefSeqCurated,16 ncbiRefSeqGenomicDiff,15 ncbiRefSeqOther,18 ncbiRefSeqPredicted,14 ncbiRefSeqPsl,10 nscanGene,4 nscanGene,8 nscanGene,14 nscanGene,60 nscanGene,103 refGene,14 refGene,196 refGene,225 refSeqComposite,10 refSeqComposite,833 refSeqComposite,862 tRNAs,12 tRNAs,78 tRNAs,295 transMapEnsemblV5,13 transMapEstV5,11 transMapRefSeqV5,12 transMapRnaV5,12 transMapV5,10 unipAliSwissprot,21 unipAliTrembl,13 unipChain,11 unipConflict,9 unipDisulfBond,9 unipDomain,7 unipInterest,9 unipLocCytopl,8 unipLocExtra,8 unipLocSignal,9 unipLocTransMemb,8 unipModif,10 unipMut,9 unipOther,9 unipRepeat,7 unipStruct,11 uniprot,10 xenoRefGene,10 xenoRefGene,157 xenoRefGene,186 prepared HLTOGAannotvHg38v1,318 gc5Base,80 ucscToRefSeq,43 uniprot,712 present HLTOGAannotvHg38v1,152 HLTOGAannotvHg38v1,172 HLTOGAannotvHg38v1,219 HLTOGAannotvHg38v1,278 cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5Base,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous ensGene,132 refSeqComposite,1224 refSeqComposite,1340 refSeqComposite,1695 uniprot,1654 previously chainGalGal3,920 chainGalVar1,935 chainHg19,917 chainMm10,917 chainMm39,917 chainMonDom4,917 chainNetGalGal3,923 chainNetGalVar1,938 chainNetHg19,920 chainNetMm10,919 chainNetMm39,920 chainNetMonDom4,920 chainNetOryCun2,920 chainNetRn6,923 chainOryCun2,917 chainRn6,920 netGalGal3,920 netGalVar1,935 netHg19,917 netMm10,917 netMm39,917 netMonDom4,917 netOryCun2,917 netRn6,920 refSeqComposite,504 primary tRNAs,73 tRNAs,234 unipStruct,4 uniprot,360 primed est,495 intronEst,576 primer est,482 intronEst,563 priming est,578 intronEst,659 principal gap,88 pringle transMapEnsemblV5,795 transMapEstV5,764 transMapRefSeqV5,764 transMapRnaV5,764 transMapV5,870 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 probability nscanGene,130 probably tRNAs,151 tRNAs,189 problem uniprot,1359 uniprot,1389 proc chainGalGal3,1074 chainGalVar1,1089 chainHg19,1071 chainMm10,1071 chainMm39,1071 chainMonDom4,1071 chainNetGalGal3,1077 chainNetGalVar1,1092 chainNetHg19,1074 chainNetMm10,1073 chainNetMm39,1074 chainNetMonDom4,1074 chainNetOryCun2,1074 chainNetRn6,1077 chainOryCun2,1071 chainRn6,1074 netGalGal3,1074 netGalVar1,1089 netHg19,1071 netMm10,1071 netMm39,1071 netMonDom4,1071 netOryCun2,1071 netRn6,1074 procedure uniprot,990 process chainGalGal3,824 chainGalVar1,839 chainHg19,821 chainMm10,821 chainMm39,821 chainMonDom4,821 chainNetGalGal3,827 chainNetGalVar1,842 chainNetHg19,824 chainNetMm10,823 chainNetMm39,824 chainNetMonDom4,824 chainNetOryCun2,824 chainNetRn6,827 chainOryCun2,821 chainRn6,824 gap,34 gap,142 netGalGal3,824 netGalVar1,839 netHg19,821 netMm10,821 netMm39,821 netMonDom4,821 netOryCun2,821 netRn6,824 refSeqComposite,651 uniprot,321 uniprot,879 uniprot,905 uniprot,1229 uniprot,1448 processed HLTOGAannotvHg38v1,97 chainGalGal3,218 chainGalVar1,226 chainHg19,216 chainMm10,216 chainMm39,216 chainMonDom4,216 chainNetGalGal3,221 chainNetGalVar1,229 chainNetHg19,219 chainNetMm10,218 chainNetMm39,219 chainNetMonDom4,219 chainNetOryCun2,219 chainNetRn6,221 chainOryCun2,216 chainRn6,218 netGalGal3,218 netGalVar1,226 netHg19,216 netMm10,216 netMm39,216 netMonDom4,216 netOryCun2,216 netRn6,218 processing refSeqComposite,1338 produce blastHg18KG,190 produced est,729 intronEst,813 mrna,446 refGene,323 refSeqComposite,384 refSeqComposite,1715 transMapEnsemblV5,22 transMapEnsemblV5,680 transMapEnsemblV5,704 transMapEstV5,20 transMapEstV5,649 transMapEstV5,673 transMapRefSeqV5,20 transMapRefSeqV5,649 transMapRefSeqV5,673 transMapRnaV5,20 transMapRnaV5,649 transMapRnaV5,673 transMapV5,19 transMapV5,142 transMapV5,755 transMapV5,779 xenoMrna,83 xenoMrna,520 xenoRefGene,284 produces refSeqComposite,49 products unipChain,5 program augustusGene,21 augustusGene,257 blastHg18KG,55 blastHg18KG,80 chainGalGal3,615 chainGalGal3,656 chainGalGal3,794 chainGalGal3,847 chainGalGal3,879 chainGalGal3,955 chainGalGal3,958 chainGalVar1,628 chainGalVar1,671 chainGalVar1,809 chainGalVar1,862 chainGalVar1,894 chainGalVar1,970 chainGalVar1,973 chainHg19,612 chainHg19,653 chainHg19,791 chainHg19,844 chainHg19,876 chainHg19,952 chainHg19,955 chainMm10,612 chainMm10,653 chainMm10,791 chainMm10,844 chainMm10,876 chainMm10,952 chainMm10,955 chainMm39,612 chainMm39,653 chainMm39,791 chainMm39,844 chainMm39,876 chainMm39,952 chainMm39,955 chainMonDom4,612 chainMonDom4,653 chainMonDom4,791 chainMonDom4,844 chainMonDom4,876 chainMonDom4,952 chainMonDom4,955 chainNetGalGal3,618 chainNetGalGal3,659 chainNetGalGal3,797 chainNetGalGal3,850 chainNetGalGal3,882 chainNetGalGal3,958 chainNetGalGal3,961 chainNetGalVar1,631 chainNetGalVar1,674 chainNetGalVar1,812 chainNetGalVar1,865 chainNetGalVar1,897 chainNetGalVar1,973 chainNetGalVar1,976 chainNetHg19,615 chainNetHg19,656 chainNetHg19,794 chainNetHg19,847 chainNetHg19,879 chainNetHg19,955 chainNetHg19,958 chainNetMm10,614 chainNetMm10,655 chainNetMm10,793 chainNetMm10,846 chainNetMm10,878 chainNetMm10,954 chainNetMm10,957 chainNetMm39,615 chainNetMm39,656 chainNetMm39,794 chainNetMm39,847 chainNetMm39,879 chainNetMm39,955 chainNetMm39,958 chainNetMonDom4,615 chainNetMonDom4,656 chainNetMonDom4,794 chainNetMonDom4,847 chainNetMonDom4,879 chainNetMonDom4,955 chainNetMonDom4,958 chainNetOryCun2,615 chainNetOryCun2,656 chainNetOryCun2,794 chainNetOryCun2,847 chainNetOryCun2,879 chainNetOryCun2,955 chainNetOryCun2,958 chainNetRn6,618 chainNetRn6,659 chainNetRn6,797 chainNetRn6,850 chainNetRn6,882 chainNetRn6,958 chainNetRn6,961 chainOryCun2,612 chainOryCun2,653 chainOryCun2,791 chainOryCun2,844 chainOryCun2,876 chainOryCun2,952 chainOryCun2,955 chainRn6,615 chainRn6,656 chainRn6,794 chainRn6,847 chainRn6,879 chainRn6,955 chainRn6,958 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 genscan,18 genscan,137 genscan,178 microsat,100 microsat,120 mrna,399 nestedRepeats,30 netGalGal3,615 netGalGal3,656 netGalGal3,794 netGalGal3,847 netGalGal3,879 netGalGal3,955 netGalGal3,958 netGalVar1,628 netGalVar1,671 netGalVar1,809 netGalVar1,862 netGalVar1,894 netGalVar1,970 netGalVar1,973 netHg19,612 netHg19,653 netHg19,791 netHg19,844 netHg19,876 netHg19,952 netHg19,955 netMm10,612 netMm10,653 netMm10,791 netMm10,844 netMm10,876 netMm10,952 netMm10,955 netMm39,612 netMm39,653 netMm39,791 netMm39,844 netMm39,876 netMm39,952 netMm39,955 netMonDom4,612 netMonDom4,653 netMonDom4,791 netMonDom4,844 netMonDom4,876 netMonDom4,952 netMonDom4,955 netOryCun2,612 netOryCun2,653 netOryCun2,791 netOryCun2,844 netOryCun2,876 netOryCun2,952 netOryCun2,955 netRn6,615 netRn6,656 netRn6,794 netRn6,847 netRn6,879 netRn6,955 netRn6,958 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 tRNAs,28 tRNAs,53 tRNAs,63 tRNAs,446 transMapEnsemblV5,315 transMapEstV5,284 transMapRefSeqV5,284 transMapRnaV5,284 transMapV5,390 uniprot,1529 programmatic ensGene,99 programmatically refSeqComposite,1324 programs chainGalGal3,1004 chainGalVar1,1019 chainHg19,1001 chainMm10,1001 chainMm39,1001 chainMonDom4,1001 chainNetGalGal3,1007 chainNetGalVar1,1022 chainNetHg19,1004 chainNetMm10,1003 chainNetMm39,1004 chainNetMonDom4,1004 chainNetOryCun2,1004 chainNetRn6,1007 chainOryCun2,1001 chainRn6,1004 netGalGal3,1004 netGalVar1,1019 netHg19,1001 netMm10,1001 netMm39,1001 netMonDom4,1001 netOryCun2,1001 netRn6,1004 uniprot,1877 project ensGene,194 refGene,340 refSeqComposite,1162 refSeqComposite,1730 xenoRefGene,301 projected uniprot,800 projection transMapEnsemblV5,57 transMapEnsemblV5,322 transMapEstV5,291 transMapRefSeqV5,291 transMapRnaV5,291 transMapV5,397 projects est,572 est,591 est,621 intronEst,653 intronEst,672 intronEst,702 transMapEnsemblV5,712 transMapEstV5,681 transMapRefSeqV5,681 transMapRnaV5,681 transMapV5,787 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 pronounced uniprot,1392 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 properties refSeqComposite,722 prot.bed uniprot,1931 uniprot,1933 protein HLTOGAannotvHg38v1,270 HLTOGAannotvHg38v1,293 HLTOGAannotvHg38v1,308 HLTOGAannotvHg38v1,311 blastHg18KG,113 blastHg18KG,132 refSeqComposite,269 refSeqComposite,362 unipChain,4 unipStruct,3 uniprot,5 uniprot,15 uniprot,84 uniprot,95 uniprot,111 uniprot,113 uniprot,137 uniprot,153 uniprot,194 uniprot,196 uniprot,252 uniprot,256 uniprot,267 uniprot,278 uniprot,293 uniprot,324 uniprot,359 uniprot,635 uniprot,672 uniprot,742 uniprot,760 uniprot,780 uniprot,790 uniprot,906 uniprot,916 uniprot,954 uniprot,966 uniprot,970 uniprot,1020 uniprot,1037 uniprot,1072 uniprot,1099 uniprot,1218 uniprot,1241 uniprot,1244 uniprot,1333 uniprot,1607 uniprot,1635 uniprot,1854 uniprot,1888 uniprot,1989 uniprot,1994 uniprot,2041 xenoMrna,82 xenoMrna,115 protein-coding augustusGene,73 refGene,24 refGene,238 refSeqComposite,21 refSeqComposite,237 refSeqComposite,543 xenoRefGene,16 xenoRefGene,199 protein-genome uniprot,875 uniprot,1174 protein-protein uniprot,315 protein-to-genome uniprot,1703 proteins HLTOGAannotvHg38v1,163 HLTOGAannotvHg38v1,193 blastHg18KG,2 blastHg18KG,4 blastHg18KG,39 refGene,421 refSeqComposite,1811 unipAliSwissprot,7 unipAliTrembl,7 uniprot,243 uniprot,744 uniprot,925 uniprot,929 uniprot,1005 uniprot,1188 uniprot,1364 uniprot,1385 uniprot,1404 uniprot,1470 xenoRefGene,381 protocadherin refSeqComposite,417 provide uniprot,1860 provided nscanGene,22 quality,90 refSeqComposite,38 refSeqComposite,69 refSeqComposite,206 refSeqComposite,445 tRNAs,318 uniprot,817 provides HLTOGAannotvHg38v1,298 uniprot,489 providing augustusGene,254 ensGene,153 genscan,175 nestedRepeats,312 nscanGene,240 rmsk,335 provisional refGene,111 refSeqComposite,621 refSeqComposite,670 xenoRefGene,72 pruitt refGene,360 refGene,402 refSeqComposite,1750 refSeqComposite,1792 xenoRefGene,320 xenoRefGene,362 pseudo tRNAs,290 pseudogene nscanGene,369 pseudogenes HLTOGAannotvHg38v1,98 chainGalGal3,219 chainGalGal3,233 chainGalVar1,227 chainGalVar1,241 chainHg19,217 chainHg19,231 chainMm10,217 chainMm10,231 chainMm39,217 chainMm39,231 chainMonDom4,217 chainMonDom4,231 chainNetGalGal3,222 chainNetGalGal3,236 chainNetGalVar1,230 chainNetGalVar1,244 chainNetHg19,220 chainNetHg19,234 chainNetMm10,219 chainNetMm10,233 chainNetMm39,220 chainNetMm39,234 chainNetMonDom4,220 chainNetMonDom4,234 chainNetOryCun2,220 chainNetOryCun2,234 chainNetRn6,222 chainNetRn6,236 chainOryCun2,217 chainOryCun2,231 chainRn6,219 chainRn6,233 netGalGal3,219 netGalGal3,233 netGalVar1,227 netGalVar1,241 netHg19,217 netHg19,231 netMm10,217 netMm10,231 netMm39,217 netMm39,231 netMonDom4,217 netMonDom4,231 netOryCun2,217 netOryCun2,231 netRn6,219 netRn6,233 nscanGene,221 refSeqComposite,409 tRNAs,299 uniprot,1184 psl est,57 intronEst,141 mrna,38 refSeqComposite,455 refSeqComposite,1179 refSeqComposite,1421 transMapEnsemblV5,103 transMapEstV5,72 transMapRefSeqV5,72 transMapRnaV5,72 transMapV5,178 uniprot,1479 xenoMrna,42 pslcdnafilter transMapEnsemblV5,354 transMapEstV5,323 transMapRefSeqV5,323 transMapRnaV5,323 transMapV5,429 pslmap transMapEnsemblV5,314 transMapEstV5,283 transMapRefSeqV5,283 transMapRnaV5,283 transMapV5,389 uniprot,889 uniprot,1497 uniprot,1528 uniprot,1880 uniprot,1900 pslreps uniprot,1482 uniprot,1502 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 ensGene,114 est,740 intronEst,824 mrna,457 refSeqComposite,1327 refSeqComposite,1630 transMapEnsemblV5,696 transMapEstV5,665 transMapRefSeqV5,665 transMapRnaV5,665 transMapV5,771 uniprot,709 xenoMrna,531 publications refSeqComposite,254 refSeqComposite,424 uniprot,38 publicly nestedRepeats,275 pull-down refGene,212 refSeqComposite,849 xenoRefGene,173 purpose simpleRepeat,32 putative blastHg18KG,83 q uniprot,1904 uniprot,1914 q99697 uniprot,1926 qgap chainGalGal3,728 chainGalVar1,743 chainHg19,725 chainMm10,725 chainMm39,725 chainMonDom4,725 chainNetGalGal3,731 chainNetGalVar1,746 chainNetHg19,728 chainNetMm10,727 chainNetMm39,728 chainNetMonDom4,728 chainNetOryCun2,728 chainNetRn6,731 chainOryCun2,725 chainRn6,728 netGalGal3,728 netGalVar1,743 netHg19,725 netMm10,725 netMm39,725 netMonDom4,725 netOryCun2,725 netRn6,728 quality est,75 mrna,56 quality,1 quality,6 quality,13 quality,19 quality,37 quality,87 xenoMrna,60 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 ensGene,105 transMapEnsemblV5,563 transMapEstV5,532 transMapRefSeqV5,532 transMapRnaV5,532 transMapV5,638 query HLTOGAannotvHg38v1,70 HLTOGAannotvHg38v1,126 HLTOGAannotvHg38v1,175 HLTOGAannotvHg38v1,222 blastHg18KG,112 blastHg18KG,124 rmsk,47 rmsk,61 uniprot,1484 xenoMrna,78 questions refSeqComposite,1694 uniprot,1834 quickly mrna,341 refGene,191 refSeqComposite,828 transMapEnsemblV5,123 transMapEstV5,92 transMapRefSeqV5,92 transMapRnaV5,92 transMapV5,198 xenoMrna,415 xenoRefGene,152 quite simpleRepeat,45 quot chainGalGal3,27 chainGalGal3,29 chainGalGal3,34 chainGalGal3,36 chainGalGal3,105 chainGalGal3,107 chainGalGal3,236 chainGalGal3,238 chainGalGal3,240 chainGalGal3,242 chainGalGal3,347 chainGalGal3,349 chainGalGal3,690 chainGalGal3,692 chainGalVar1,30 chainGalVar1,32 chainGalVar1,37 chainGalVar1,39 chainGalVar1,111 chainGalVar1,113 chainGalVar1,244 chainGalVar1,246 chainGalVar1,248 chainGalVar1,250 chainGalVar1,358 chainGalVar1,360 chainGalVar1,705 chainGalVar1,707 chainHg19,26 chainHg19,28 chainHg19,33 chainHg19,35 chainHg19,103 chainHg19,105 chainHg19,234 chainHg19,236 chainHg19,238 chainHg19,240 chainHg19,344 chainHg19,346 chainHg19,687 chainHg19,689 chainMm10,26 chainMm10,28 chainMm10,33 chainMm10,35 chainMm10,103 chainMm10,105 chainMm10,234 chainMm10,236 chainMm10,238 chainMm10,240 chainMm10,344 chainMm10,346 chainMm10,687 chainMm10,689 chainMm39,26 chainMm39,28 chainMm39,33 chainMm39,35 chainMm39,103 chainMm39,105 chainMm39,234 chainMm39,236 chainMm39,238 chainMm39,240 chainMm39,344 chainMm39,346 chainMm39,687 chainMm39,689 chainMonDom4,26 chainMonDom4,28 chainMonDom4,33 chainMonDom4,35 chainMonDom4,103 chainMonDom4,105 chainMonDom4,234 chainMonDom4,236 chainMonDom4,238 chainMonDom4,240 chainMonDom4,344 chainMonDom4,346 chainMonDom4,687 chainMonDom4,689 chainNetGalGal3,30 chainNetGalGal3,32 chainNetGalGal3,37 chainNetGalGal3,39 chainNetGalGal3,108 chainNetGalGal3,110 chainNetGalGal3,239 chainNetGalGal3,241 chainNetGalGal3,243 chainNetGalGal3,245 chainNetGalGal3,350 chainNetGalGal3,352 chainNetGalGal3,693 chainNetGalGal3,695 chainNetGalVar1,33 chainNetGalVar1,35 chainNetGalVar1,40 chainNetGalVar1,42 chainNetGalVar1,114 chainNetGalVar1,116 chainNetGalVar1,247 chainNetGalVar1,249 chainNetGalVar1,251 chainNetGalVar1,253 chainNetGalVar1,361 chainNetGalVar1,363 chainNetGalVar1,708 chainNetGalVar1,710 chainNetHg19,29 chainNetHg19,31 chainNetHg19,36 chainNetHg19,38 chainNetHg19,106 chainNetHg19,108 chainNetHg19,237 chainNetHg19,239 chainNetHg19,241 chainNetHg19,243 chainNetHg19,347 chainNetHg19,349 chainNetHg19,690 chainNetHg19,692 chainNetMm10,28 chainNetMm10,30 chainNetMm10,35 chainNetMm10,37 chainNetMm10,105 chainNetMm10,107 chainNetMm10,236 chainNetMm10,238 chainNetMm10,240 chainNetMm10,242 chainNetMm10,346 chainNetMm10,348 chainNetMm10,689 chainNetMm10,691 chainNetMm39,29 chainNetMm39,31 chainNetMm39,36 chainNetMm39,38 chainNetMm39,106 chainNetMm39,108 chainNetMm39,237 chainNetMm39,239 chainNetMm39,241 chainNetMm39,243 chainNetMm39,347 chainNetMm39,349 chainNetMm39,690 chainNetMm39,692 chainNetMonDom4,29 chainNetMonDom4,31 chainNetMonDom4,36 chainNetMonDom4,38 chainNetMonDom4,106 chainNetMonDom4,108 chainNetMonDom4,237 chainNetMonDom4,239 chainNetMonDom4,241 chainNetMonDom4,243 chainNetMonDom4,347 chainNetMonDom4,349 chainNetMonDom4,690 chainNetMonDom4,692 chainNetOryCun2,29 chainNetOryCun2,31 chainNetOryCun2,36 chainNetOryCun2,38 chainNetOryCun2,106 chainNetOryCun2,108 chainNetOryCun2,237 chainNetOryCun2,239 chainNetOryCun2,241 chainNetOryCun2,243 chainNetOryCun2,347 chainNetOryCun2,349 chainNetOryCun2,690 chainNetOryCun2,692 chainNetRn6,30 chainNetRn6,32 chainNetRn6,37 chainNetRn6,39 chainNetRn6,108 chainNetRn6,110 chainNetRn6,239 chainNetRn6,241 chainNetRn6,243 chainNetRn6,245 chainNetRn6,350 chainNetRn6,352 chainNetRn6,693 chainNetRn6,695 chainOryCun2,26 chainOryCun2,28 chainOryCun2,33 chainOryCun2,35 chainOryCun2,103 chainOryCun2,105 chainOryCun2,234 chainOryCun2,236 chainOryCun2,238 chainOryCun2,240 chainOryCun2,344 chainOryCun2,346 chainOryCun2,687 chainOryCun2,689 chainRn6,27 chainRn6,29 chainRn6,34 chainRn6,36 chainRn6,105 chainRn6,107 chainRn6,236 chainRn6,238 chainRn6,240 chainRn6,242 chainRn6,347 chainRn6,349 chainRn6,690 chainRn6,692 est,241 est,243 est,292 est,294 est,308 est,310 est,344 est,346 est,361 est,363 gc5Base,58 gc5Base,62 gold,37 gold,39 gold,135 gold,137 intronEst,322 intronEst,324 intronEst,373 intronEst,375 intronEst,389 intronEst,391 intronEst,425 intronEst,427 intronEst,442 intronEst,444 mrna,187 mrna,189 mrna,238 mrna,240 mrna,254 mrna,256 mrna,290 mrna,292 mrna,307 mrna,309 netGalGal3,27 netGalGal3,29 netGalGal3,34 netGalGal3,36 netGalGal3,105 netGalGal3,107 netGalGal3,236 netGalGal3,238 netGalGal3,240 netGalGal3,242 netGalGal3,347 netGalGal3,349 netGalGal3,690 netGalGal3,692 netGalVar1,30 netGalVar1,32 netGalVar1,37 netGalVar1,39 netGalVar1,111 netGalVar1,113 netGalVar1,244 netGalVar1,246 netGalVar1,248 netGalVar1,250 netGalVar1,358 netGalVar1,360 netGalVar1,705 netGalVar1,707 netHg19,26 netHg19,28 netHg19,33 netHg19,35 netHg19,103 netHg19,105 netHg19,234 netHg19,236 netHg19,238 netHg19,240 netHg19,344 netHg19,346 netHg19,687 netHg19,689 netMm10,26 netMm10,28 netMm10,33 netMm10,35 netMm10,103 netMm10,105 netMm10,234 netMm10,236 netMm10,238 netMm10,240 netMm10,344 netMm10,346 netMm10,687 netMm10,689 netMm39,26 netMm39,28 netMm39,33 netMm39,35 netMm39,103 netMm39,105 netMm39,234 netMm39,236 netMm39,238 netMm39,240 netMm39,344 netMm39,346 netMm39,687 netMm39,689 netMonDom4,26 netMonDom4,28 netMonDom4,33 netMonDom4,35 netMonDom4,103 netMonDom4,105 netMonDom4,234 netMonDom4,236 netMonDom4,238 netMonDom4,240 netMonDom4,344 netMonDom4,346 netMonDom4,687 netMonDom4,689 netOryCun2,26 netOryCun2,28 netOryCun2,33 netOryCun2,35 netOryCun2,103 netOryCun2,105 netOryCun2,234 netOryCun2,236 netOryCun2,238 netOryCun2,240 netOryCun2,344 netOryCun2,346 netOryCun2,687 netOryCun2,689 netRn6,27 netRn6,29 netRn6,34 netRn6,36 netRn6,105 netRn6,107 netRn6,236 netRn6,238 netRn6,240 netRn6,242 netRn6,347 netRn6,349 netRn6,690 netRn6,692 refSeqComposite,508 refSeqComposite,511 refSeqComposite,1435 refSeqComposite,1437 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 tRNAs,205 tRNAs,207 tRNAs,289 tRNAs,291 uniprot,63 uniprot,66 uniprot,261 uniprot,263 uniprot,272 uniprot,274 uniprot,283 uniprot,285 uniprot,412 uniprot,416 uniprot,423 uniprot,426 uniprot,431 uniprot,435 uniprot,437 uniprot,441 uniprot,468 uniprot,470 uniprot,471 uniprot,474 uniprot,475 uniprot,478 uniprot,572 uniprot,575 windowmaskerSdust,82 windowmaskerSdust,84 xenoMrna,261 xenoMrna,263 xenoMrna,312 xenoMrna,314 xenoMrna,328 xenoMrna,330 xenoMrna,364 xenoMrna,366 xenoMrna,381 xenoMrna,383 r augustusGene,291 chainGalGal3,1054 chainGalGal3,1100 chainGalVar1,1069 chainGalVar1,1115 chainHg19,1051 chainHg19,1097 chainMm10,1051 chainMm10,1097 chainMm39,1051 chainMm39,1097 chainMonDom4,1051 chainMonDom4,1097 chainNetGalGal3,1057 chainNetGalGal3,1103 chainNetGalVar1,1072 chainNetGalVar1,1118 chainNetHg19,1054 chainNetHg19,1100 chainNetMm10,1053 chainNetMm10,1099 chainNetMm39,1054 chainNetMm39,1100 chainNetMonDom4,1054 chainNetMonDom4,1100 chainNetOryCun2,1054 chainNetOryCun2,1100 chainNetRn6,1057 chainNetRn6,1103 chainOryCun2,1051 chainOryCun2,1097 chainRn6,1054 chainRn6,1100 nestedRepeats,327 netGalGal3,1054 netGalGal3,1100 netGalVar1,1069 netGalVar1,1115 netHg19,1051 netHg19,1097 netMm10,1051 netMm10,1097 netMm39,1051 netMm39,1097 netMonDom4,1051 netMonDom4,1097 netOryCun2,1051 netOryCun2,1097 netRn6,1054 netRn6,1100 nscanGene,305 rmsk,350 tRNAs,397 transMapEnsemblV5,762 transMapEstV5,731 transMapRefSeqV5,731 transMapRnaV5,731 transMapV5,837 windowmaskerSdust,99 r.s chainGalGal3,1019 chainGalVar1,1034 chainHg19,1016 chainMm10,1016 chainMm39,1016 chainMonDom4,1016 chainNetGalGal3,1022 chainNetGalVar1,1037 chainNetHg19,1019 chainNetMm10,1018 chainNetMm39,1019 chainNetMonDom4,1019 chainNetOryCun2,1019 chainNetRn6,1022 chainOryCun2,1016 chainRn6,1019 netGalGal3,1019 netGalVar1,1034 netHg19,1016 netMm10,1016 netMm39,1016 netMonDom4,1016 netOryCun2,1016 netRn6,1019 rabbit chainNetOryCun2,1 chainNetOryCun2,4 chainNetOryCun2,68 chainNetOryCun2,100 chainNetOryCun2,153 chainNetOryCun2,273 chainNetOryCun2,300 chainNetOryCun2,581 chainNetOryCun2,630 chainNetOryCun2Viewchain,2 chainNetOryCun2Viewnet,2 chainOryCun2,1 chainOryCun2,3 chainOryCun2,65 chainOryCun2,97 chainOryCun2,150 chainOryCun2,270 chainOryCun2,297 chainOryCun2,578 chainOryCun2,627 netOryCun2,1 netOryCun2,3 netOryCun2,65 netOryCun2,97 netOryCun2,150 netOryCun2,270 netOryCun2,297 netOryCun2,578 netOryCun2,627 random augustusGene,119 est,574 intronEst,655 random-primed est,620 intronEst,701 raney blastHg18KG,200 uniprot,1960 range nestedRepeats,227 nestedRepeats,236 quality,47 refSeqComposite,988 tRNAs,260 transMapEnsemblV5,658 transMapEstV5,627 transMapRefSeqV5,627 transMapRnaV5,627 transMapV5,733 uniprot,1809 ranked chainGalGal3,791 chainGalVar1,806 chainHg19,788 chainMm10,788 chainMm39,788 chainMonDom4,788 chainNetGalGal3,794 chainNetGalVar1,809 chainNetHg19,791 chainNetMm10,790 chainNetMm39,791 chainNetMonDom4,791 chainNetOryCun2,791 chainNetRn6,794 chainOryCun2,788 chainRn6,791 netGalGal3,791 netGalVar1,806 netHg19,788 netMm10,788 netMm39,788 netMonDom4,788 netOryCun2,788 netRn6,791 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rat chainNetRn6,1 chainNetRn6,4 chainNetRn6,69 chainNetRn6,102 chainNetRn6,155 chainNetRn6,275 chainNetRn6,302 chainNetRn6,584 chainNetRn6,633 chainNetRn6Viewchain,2 chainNetRn6Viewnet,2 chainRn6,1 chainRn6,3 chainRn6,66 chainRn6,99 chainRn6,152 chainRn6,272 chainRn6,299 chainRn6,581 chainRn6,630 netRn6,1 netRn6,3 netRn6,66 netRn6,99 netRn6,152 netRn6,272 netRn6,299 netRn6,581 netRn6,630 rate tRNAs,89 rates nscanGene,97 rather est,575 intronEst,656 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 raw refSeqComposite,1293 transMapEnsemblV5,521 transMapEstV5,490 transMapRefSeqV5,490 transMapRnaV5,490 transMapV5,596 uniprot,1708 rc chainGalGal3,1102 chainGalVar1,1117 chainHg19,1099 chainMm10,1099 chainMm39,1099 chainMonDom4,1099 chainNetGalGal3,1105 chainNetGalVar1,1120 chainNetHg19,1102 chainNetMm10,1101 chainNetMm39,1102 chainNetMonDom4,1102 chainNetOryCun2,1102 chainNetRn6,1105 chainOryCun2,1099 chainRn6,1102 netGalGal3,1102 netGalVar1,1117 netHg19,1099 netMm10,1099 netMm39,1099 netMonDom4,1099 netOryCun2,1099 netRn6,1102 rmsk,200 read est,473 gap,62 gap,153 gold,55 intronEst,554 refSeqComposite,1462 reads gap,125 gap,145 gold,22 realigning refSeqComposite,51 realignment refSeqComposite,59 refSeqComposite,488 rearrangement chainGalGal3,297 chainGalGal3,501 chainGalGal3,1067 chainGalVar1,307 chainGalVar1,512 chainGalVar1,1082 chainHg19,295 chainHg19,498 chainHg19,1064 chainMm10,295 chainMm10,498 chainMm10,1064 chainMm39,295 chainMm39,498 chainMm39,1064 chainMonDom4,295 chainMonDom4,498 chainMonDom4,1064 chainNetGalGal3,300 chainNetGalGal3,504 chainNetGalGal3,1070 chainNetGalVar1,310 chainNetGalVar1,515 chainNetGalVar1,1085 chainNetHg19,298 chainNetHg19,501 chainNetHg19,1067 chainNetMm10,297 chainNetMm10,500 chainNetMm10,1066 chainNetMm39,298 chainNetMm39,501 chainNetMm39,1067 chainNetMonDom4,298 chainNetMonDom4,501 chainNetMonDom4,1067 chainNetOryCun2,298 chainNetOryCun2,501 chainNetOryCun2,1067 chainNetRn6,300 chainNetRn6,504 chainNetRn6,1070 chainOryCun2,295 chainOryCun2,498 chainOryCun2,1064 chainRn6,297 chainRn6,501 chainRn6,1067 netGalGal3,297 netGalGal3,501 netGalGal3,1067 netGalVar1,307 netGalVar1,512 netGalVar1,1082 netHg19,295 netHg19,498 netHg19,1064 netMm10,295 netMm10,498 netMm10,1064 netMm39,295 netMm39,498 netMm39,1064 netMonDom4,295 netMonDom4,498 netMonDom4,1064 netOryCun2,295 netOryCun2,498 netOryCun2,1064 netRn6,297 netRn6,501 netRn6,1067 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably est,541 est,564 intronEst,622 intronEst,645 recently uniprot,1186 reciprocal transMapEnsemblV5,241 transMapEstV5,210 transMapRefSeqV5,210 transMapRnaV5,210 transMapV5,66 transMapV5,316 record refGene,106 refSeqComposite,616 refSeqComposite,637 refSeqComposite,673 refSeqComposite,698 refSeqComposite,713 uniprot,496 xenoRefGene,67 records refGene,69 refSeqComposite,128 refSeqComposite,662 reduced intronEst,106 refer ensGene,42 genscan,144 refSeqComposite,1687 uniprot,1827 reference HLTOGAannotvHg38v1,10 HLTOGAannotvHg38v1,51 HLTOGAannotvHg38v1,68 HLTOGAannotvHg38v1,117 ncbiRefSeqGenomicDiff,10 refGene,33 refGene,52 refGene,387 refGene,409 refSeqComposite,30 refSeqComposite,111 refSeqComposite,466 refSeqComposite,880 refSeqComposite,1090 refSeqComposite,1777 refSeqComposite,1799 ucscToRefSeq,23 uniprot,1378 uniprot,1422 xenoRefGene,31 xenoRefGene,347 xenoRefGene,369 references HLTOGAannotvHg38v1,324 augustusGene,285 chainGalGal3,1017 chainGalVar1,1032 chainHg19,1014 chainMm10,1014 chainMm39,1014 chainMonDom4,1014 chainNetGalGal3,1020 chainNetGalVar1,1035 chainNetHg19,1017 chainNetMm10,1016 chainNetMm39,1017 chainNetMonDom4,1017 chainNetOryCun2,1017 chainNetRn6,1020 chainOryCun2,1014 chainRn6,1017 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 ensGene,52 ensGene,167 est,746 genscan,152 genscan,179 intronEst,830 microsat,113 mrna,463 nestedRepeats,66 nestedRepeats,323 netGalGal3,1017 netGalVar1,1032 netHg19,1014 netMm10,1014 netMm39,1014 netMonDom4,1014 netOryCun2,1014 netRn6,1017 nscanGene,269 refGene,341 refSeqComposite,1731 rmsk,102 rmsk,346 simpleRepeat,73 tRNAs,354 transMapEnsemblV5,713 transMapEstV5,682 transMapRefSeqV5,682 transMapRnaV5,682 transMapV5,788 uniprot,1984 windowmaskerSdust,89 xenoMrna,537 xenoRefGene,302 refgene refSeqComposite,1420 transMapEnsemblV5,595 transMapEstV5,564 transMapRefSeqV5,2 transMapRefSeqV5,564 transMapRnaV5,564 transMapV5,670 reflect quality,50 reflecting nscanGene,147 reflects rmsk,213 refseq ncbiRefSeq,1 ncbiRefSeq,4 ncbiRefSeqCurated,1 ncbiRefSeqCurated,4 ncbiRefSeqGenomicDiff,1 ncbiRefSeqGenomicDiff,6 ncbiRefSeqOther,1 ncbiRefSeqOther,4 ncbiRefSeqPredicted,1 ncbiRefSeqPredicted,4 ncbiRefSeqPsl,1 ncbiRefSeqPsl,3 refGene,2 refGene,6 refGene,17 refGene,36 refGene,54 refGene,68 refGene,105 refGene,257 refGene,339 refGene,382 refGene,411 refSeqComposite,2 refSeqComposite,3 refSeqComposite,14 refSeqComposite,33 refSeqComposite,40 refSeqComposite,45 refSeqComposite,53 refSeqComposite,84 refSeqComposite,87 refSeqComposite,113 refSeqComposite,127 refSeqComposite,189 refSeqComposite,196 refSeqComposite,198 refSeqComposite,208 refSeqComposite,209 refSeqComposite,214 refSeqComposite,314 refSeqComposite,335 refSeqComposite,339 refSeqComposite,344 refSeqComposite,378 refSeqComposite,387 refSeqComposite,399 refSeqComposite,403 refSeqComposite,433 refSeqComposite,438 refSeqComposite,448 refSeqComposite,457 refSeqComposite,470 refSeqComposite,481 refSeqComposite,509 refSeqComposite,513 refSeqComposite,522 refSeqComposite,530 refSeqComposite,547 refSeqComposite,549 refSeqComposite,555 refSeqComposite,582 refSeqComposite,588 refSeqComposite,590 refSeqComposite,592 refSeqComposite,596 refSeqComposite,615 refSeqComposite,629 refSeqComposite,636 refSeqComposite,661 refSeqComposite,672 refSeqComposite,697 refSeqComposite,712 refSeqComposite,869 refSeqComposite,885 refSeqComposite,1096 refSeqComposite,1116 refSeqComposite,1131 refSeqComposite,1145 refSeqComposite,1148 refSeqComposite,1161 refSeqComposite,1168 refSeqComposite,1199 refSeqComposite,1209 refSeqComposite,1214 refSeqComposite,1225 refSeqComposite,1228 refSeqComposite,1357 refSeqComposite,1371 refSeqComposite,1374 refSeqComposite,1409 refSeqComposite,1412 refSeqComposite,1415 refSeqComposite,1419 refSeqComposite,1423 refSeqComposite,1573 refSeqComposite,1670 refSeqComposite,1672 refSeqComposite,1675 refSeqComposite,1729 refSeqComposite,1772 refSeqComposite,1801 transMapEnsemblV5,170 transMapEnsemblV5,707 transMapEstV5,139 transMapEstV5,676 transMapRefSeqV5,4 transMapRefSeqV5,17 transMapRefSeqV5,139 transMapRefSeqV5,676 transMapRnaV5,139 transMapRnaV5,676 transMapV5,245 transMapV5,782 ucscToRefSeq,1 ucscToRefSeq,3 ucscToRefSeq,26 uniprot,823 uniprot,828 uniprot,841 uniprot,845 uniprot,857 uniprot,864 uniprot,1002 uniprot,1010 uniprot,1055 uniprot,1207 uniprot,1236 uniprot,1276 uniprot,1290 xenoRefGene,2 xenoRefGene,5 xenoRefGene,34 xenoRefGene,66 xenoRefGene,300 xenoRefGene,342 xenoRefGene,371 refseqdiffs refSeqComposite,1476 refseqother refSeqComposite,1474 regeneron uniprot,1968 region chainGalGal3,203 chainGalGal3,404 chainGalVar1,211 chainGalVar1,415 chainHg19,201 chainHg19,401 chainMm10,201 chainMm10,401 chainMm39,201 chainMm39,401 chainMonDom4,201 chainMonDom4,401 chainNetGalGal3,206 chainNetGalGal3,407 chainNetGalVar1,214 chainNetGalVar1,418 chainNetHg19,204 chainNetHg19,404 chainNetMm10,203 chainNetMm10,403 chainNetMm39,204 chainNetMm39,404 chainNetMonDom4,204 chainNetMonDom4,404 chainNetOryCun2,204 chainNetOryCun2,404 chainNetRn6,206 chainNetRn6,407 chainOryCun2,201 chainOryCun2,401 chainRn6,203 chainRn6,404 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netGalGal3,203 netGalGal3,404 netGalVar1,211 netGalVar1,415 netHg19,201 netHg19,401 netMm10,201 netMm10,401 netMm39,201 netMm39,401 netMonDom4,201 netMonDom4,401 netOryCun2,201 netOryCun2,401 netRn6,203 netRn6,404 refSeqComposite,991 refSeqComposite,1543 uniprot,312 regions HLTOGAannotvHg38v1,85 augustusGene,76 chainGalGal3,17 chainGalGal3,138 chainGalGal3,290 chainGalVar1,20 chainGalVar1,144 chainGalVar1,300 chainHg19,16 chainHg19,136 chainHg19,288 chainMm10,16 chainMm10,136 chainMm10,288 chainMm39,16 chainMm39,136 chainMm39,288 chainMonDom4,16 chainMonDom4,136 chainMonDom4,288 chainNetGalGal3,20 chainNetGalGal3,141 chainNetGalGal3,293 chainNetGalVar1,23 chainNetGalVar1,147 chainNetGalVar1,303 chainNetHg19,19 chainNetHg19,139 chainNetHg19,291 chainNetMm10,18 chainNetMm10,138 chainNetMm10,290 chainNetMm39,19 chainNetMm39,139 chainNetMm39,291 chainNetMonDom4,19 chainNetMonDom4,139 chainNetMonDom4,291 chainNetOryCun2,19 chainNetOryCun2,139 chainNetOryCun2,291 chainNetRn6,20 chainNetRn6,141 chainNetRn6,293 chainOryCun2,16 chainOryCun2,136 chainOryCun2,288 chainRn6,17 chainRn6,138 chainRn6,290 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 genscan,48 microsat,14 netGalGal3,17 netGalGal3,138 netGalGal3,290 netGalVar1,20 netGalVar1,144 netGalVar1,300 netHg19,16 netHg19,136 netHg19,288 netMm10,16 netMm10,136 netMm10,288 netMm39,16 netMm39,136 netMm39,288 netMonDom4,16 netMonDom4,136 netMonDom4,288 netOryCun2,16 netOryCun2,136 netOryCun2,288 netRn6,17 netRn6,138 netRn6,290 nscanGene,154 refSeqComposite,1496 simpleRepeat,39 tRNAs,499 transMapEnsemblV5,303 transMapEnsemblV5,604 transMapEstV5,272 transMapEstV5,573 transMapRefSeqV5,272 transMapRefSeqV5,573 transMapRnaV5,272 transMapRnaV5,573 transMapV5,378 transMapV5,679 unipInterest,3 uniprot,240 uniprot,297 uniprot,300 uniprot,328 uniprot,348 uniprot,368 uniprot,384 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 transMapV5,75 uniprot,551 relationship chainGalGal3,857 chainGalVar1,872 chainHg19,854 chainMm10,854 chainMm39,854 chainMonDom4,854 chainNetGalGal3,860 chainNetGalVar1,875 chainNetHg19,857 chainNetMm10,856 chainNetMm39,857 chainNetMonDom4,857 chainNetOryCun2,857 chainNetRn6,860 chainOryCun2,854 chainRn6,857 est,96 intronEst,177 netGalGal3,857 netGalVar1,872 netHg19,854 netMm10,854 netMm39,854 netMonDom4,854 netOryCun2,854 netRn6,857 relationships nscanGene,89 relative chainGalGal3,873 chainGalVar1,888 chainHg19,870 chainMm10,870 chainMm39,870 chainMonDom4,870 chainNetGalGal3,876 chainNetGalVar1,891 chainNetHg19,873 chainNetMm10,872 chainNetMm39,873 chainNetMonDom4,873 chainNetOryCun2,873 chainNetRn6,876 chainOryCun2,870 chainRn6,873 gap,46 gold,100 netGalGal3,873 netGalVar1,888 netHg19,870 netMm10,870 netMm39,870 netMonDom4,870 netOryCun2,870 netRn6,873 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 release refSeqComposite,1118 uniprot,1589 releases uniprot,1561 uniprot,1686 relevant est,160 intronEst,241 mrna,106 uniprot,681 xenoMrna,180 relies HLTOGAannotvHg38v1,78 remain uniprot,1189 remaining blastHg18KG,186 chainGalGal3,696 chainGalVar1,711 chainHg19,693 chainMm10,693 chainMm39,693 chainMonDom4,693 chainNetGalGal3,699 chainNetGalVar1,714 chainNetHg19,696 chainNetMm10,695 chainNetMm39,696 chainNetMonDom4,696 chainNetOryCun2,696 chainNetRn6,699 chainOryCun2,693 chainRn6,696 netGalGal3,696 netGalVar1,711 netHg19,693 netMm10,693 netMm39,693 netMonDom4,693 netOryCun2,693 netRn6,696 removal nscanGene,370 removed chainGalGal3,586 chainGalVar1,599 chainHg19,583 chainMm10,583 chainMm39,583 chainMonDom4,583 chainNetGalGal3,589 chainNetGalVar1,602 chainNetHg19,586 chainNetMm10,585 chainNetMm39,586 chainNetMonDom4,586 chainNetOryCun2,586 chainNetRn6,589 chainOryCun2,583 chainRn6,586 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netGalGal3,586 netGalVar1,599 netHg19,583 netMm10,583 netMm39,583 netMonDom4,583 netOryCun2,583 netRn6,586 nscanGene,208 rmsk,279 uniprot,597 uniprot,1150 removes transMapEnsemblV5,308 transMapEstV5,277 transMapRefSeqV5,277 transMapRnaV5,277 transMapV5,383 rendered tRNAs,346 reorganizing uniprot,1987 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeated uniprot,386 uniprot,390 repeating rmsk,2 repeatmasker chainGalGal3,954 chainGalVar1,969 chainHg19,951 chainMm10,951 chainMm39,951 chainMonDom4,951 chainNetGalGal3,957 chainNetGalVar1,972 chainNetHg19,954 chainNetMm10,953 chainNetMm39,954 chainNetMonDom4,954 chainNetOryCun2,954 chainNetRn6,957 chainOryCun2,951 chainRn6,954 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netGalGal3,954 netGalVar1,969 netHg19,951 netMm10,951 netMm39,951 netMonDom4,951 netOryCun2,951 netRn6,954 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats chainGalGal3,946 chainGalVar1,961 chainHg19,943 chainMm10,943 chainMm39,943 chainMonDom4,943 chainNetGalGal3,949 chainNetGalVar1,964 chainNetHg19,946 chainNetMm10,945 chainNetMm39,946 chainNetMonDom4,946 chainNetOryCun2,946 chainNetRn6,949 chainOryCun2,943 chainRn6,946 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netGalGal3,946 netGalVar1,961 netHg19,943 netMm10,943 netMm39,943 netMonDom4,943 netOryCun2,943 netRn6,946 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 unipRepeat,1 unipRepeat,3 uniprot,383 uniprot,440 windowmaskerSdust,11 repeats.bed windowmaskerSdust,73 windowmaskerSdust,75 repetitive nestedRepeats,351 refSeqComposite,981 refSeqComposite,1009 rmsk,374 uniprot,1400 reporting refSeqComposite,1093 represent chainGalGal3,136 chainGalGal3,164 chainGalGal3,451 chainGalGal3,456 chainGalVar1,142 chainGalVar1,172 chainGalVar1,462 chainGalVar1,467 chainHg19,134 chainHg19,162 chainHg19,448 chainHg19,453 chainMm10,134 chainMm10,162 chainMm10,448 chainMm10,453 chainMm39,134 chainMm39,162 chainMm39,448 chainMm39,453 chainMonDom4,134 chainMonDom4,162 chainMonDom4,448 chainMonDom4,453 chainNetGalGal3,139 chainNetGalGal3,167 chainNetGalGal3,454 chainNetGalGal3,459 chainNetGalVar1,145 chainNetGalVar1,175 chainNetGalVar1,465 chainNetGalVar1,470 chainNetHg19,137 chainNetHg19,165 chainNetHg19,451 chainNetHg19,456 chainNetMm10,136 chainNetMm10,164 chainNetMm10,450 chainNetMm10,455 chainNetMm39,137 chainNetMm39,165 chainNetMm39,451 chainNetMm39,456 chainNetMonDom4,137 chainNetMonDom4,165 chainNetMonDom4,451 chainNetMonDom4,456 chainNetOryCun2,137 chainNetOryCun2,165 chainNetOryCun2,451 chainNetOryCun2,456 chainNetRn6,139 chainNetRn6,167 chainNetRn6,454 chainNetRn6,459 chainOryCun2,134 chainOryCun2,162 chainOryCun2,448 chainOryCun2,453 chainRn6,136 chainRn6,164 chainRn6,451 chainRn6,456 est,41 intronEst,52 netGalGal3,136 netGalGal3,164 netGalGal3,451 netGalGal3,456 netGalVar1,142 netGalVar1,172 netGalVar1,462 netGalVar1,467 netHg19,134 netHg19,162 netHg19,448 netHg19,453 netMm10,134 netMm10,162 netMm10,448 netMm10,453 netMm39,134 netMm39,162 netMm39,448 netMm39,453 netMonDom4,134 netMonDom4,162 netMonDom4,448 netMonDom4,453 netOryCun2,134 netOryCun2,162 netOryCun2,448 netOryCun2,453 netRn6,136 netRn6,164 netRn6,451 netRn6,456 tRNAs,80 representation quality,100 representative refSeqComposite,540 represented gap,37 gap,105 rmsk,49 representing gap,80 reproducibility uniprot,1645 required refSeqComposite,910 refSeqComposite,924 tRNAs,217 requirements refSeqComposite,394 requiring intronEst,94 res chainGalGal3,1112 chainGalVar1,1127 chainHg19,1109 chainMm10,1109 chainMm39,1109 chainMonDom4,1109 chainNetGalGal3,1115 chainNetGalVar1,1130 chainNetHg19,1112 chainNetMm10,1111 chainNetMm39,1112 chainNetMonDom4,1112 chainNetOryCun2,1112 chainNetRn6,1115 chainOryCun2,1109 chainRn6,1112 ensGene,197 est,764 est,789 est,809 intronEst,848 intronEst,873 intronEst,893 microsat,127 mrna,481 mrna,506 mrna,526 netGalGal3,1112 netGalVar1,1127 netHg19,1109 netMm10,1109 netMm39,1109 netMonDom4,1109 netOryCun2,1109 netRn6,1112 nscanGene,326 nscanGene,375 refGene,350 refGene,391 refGene,424 refSeqComposite,1740 refSeqComposite,1781 refSeqComposite,1814 simpleRepeat,87 tRNAs,383 tRNAs,406 tRNAs,459 tRNAs,502 transMapEnsemblV5,747 transMapEstV5,716 transMapRefSeqV5,716 transMapRnaV5,716 transMapV5,822 uniprot,1999 xenoMrna,555 xenoMrna,580 xenoMrna,600 xenoRefGene,310 xenoRefGene,351 xenoRefGene,384 research nestedRepeats,54 refSeqComposite,1104 rmsk,90 residues uniprot,344 resolve uniprot,1357 resolved uniprot,1284 resource uniprot,1995 uniprot,2033 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 ensGene,108 refSeqComposite,1311 restricted refSeqComposite,581 result chainGalGal3,177 chainGalVar1,185 chainHg19,175 chainMm10,175 chainMm39,175 chainMonDom4,175 chainNetGalGal3,180 chainNetGalVar1,188 chainNetHg19,178 chainNetMm10,177 chainNetMm39,178 chainNetMonDom4,178 chainNetOryCun2,178 chainNetRn6,180 chainOryCun2,175 chainRn6,177 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netGalGal3,177 netGalVar1,185 netHg19,175 netMm10,175 netMm39,175 netMonDom4,175 netOryCun2,175 netRn6,177 refSeqComposite,61 transMapEnsemblV5,507 transMapEstV5,476 transMapRefSeqV5,476 transMapRnaV5,476 transMapV5,582 uniprot,798 uniprot,1065 uniprot,1170 resulting chainGalGal3,605 chainGalVar1,618 chainHg19,602 chainMm10,602 chainMm39,602 chainMonDom4,602 chainNetGalGal3,608 chainNetGalVar1,621 chainNetHg19,605 chainNetMm10,604 chainNetMm39,605 chainNetMonDom4,605 chainNetOryCun2,605 chainNetRn6,608 chainOryCun2,602 chainRn6,605 netGalGal3,605 netGalVar1,618 netHg19,602 netMm10,602 netMm39,602 netMonDom4,602 netOryCun2,602 netRn6,605 refSeqComposite,285 transMapEnsemblV5,81 transMapEnsemblV5,337 transMapEnsemblV5,349 transMapEnsemblV5,494 transMapEstV5,50 transMapEstV5,306 transMapEstV5,318 transMapEstV5,463 transMapRefSeqV5,50 transMapRefSeqV5,306 transMapRefSeqV5,318 transMapRefSeqV5,463 transMapRnaV5,50 transMapRnaV5,306 transMapRnaV5,318 transMapRnaV5,463 transMapV5,51 transMapV5,412 transMapV5,424 transMapV5,569 uniprot,874 uniprot,1137 uniprot,1308 results refSeqComposite,1102 uniprot,1463 uniprot,1649 retained uniprot,795 retaining nscanGene,163 retrieve est,583 intronEst,664 retroposons rmsk,173 reverse est,458 est,492 est,509 intronEst,539 intronEst,573 intronEst,590 review refGene,103 refSeqComposite,613 refSeqComposite,633 refSeqComposite,650 refSeqComposite,681 refSeqComposite,706 xenoRefGene,64 reviewed refGene,113 refSeqComposite,624 refSeqComposite,634 refSeqComposite,640 xenoRefGene,74 reviews refSeqComposite,259 rgsc chainNetRn6,7 chainNetRn6,72 chainNetRn6,313 chainNetRn6Viewchain,5 chainNetRn6Viewnet,5 chainRn6,6 chainRn6,69 chainRn6,310 netRn6,6 netRn6,69 netRn6,310 ribosome tRNAs,157 richer nscanGene,80 riestra uniprot,1972 right refSeqComposite,975 rightmost refSeqComposite,1017 rk nscanGene,300 rn6 chainNetRn6,9 chainNetRn6,74 chainNetRn6,315 chainNetRn6Viewchain,7 chainNetRn6Viewnet,7 chainRn6,8 chainRn6,71 chainRn6,312 netRn6,8 netRn6,71 netRn6,312 rna est,104 est,452 intronEst,185 intronEst,533 refGene,32 refGene,281 refGene,327 refSeqComposite,29 refSeqComposite,1089 refSeqComposite,1149 refSeqComposite,1210 refSeqComposite,1252 refSeqComposite,1660 rmsk,186 rmsk,189 tRNAs,4 tRNAs,375 tRNAs,398 tRNAs,452 transMapEnsemblV5,598 transMapEstV5,567 transMapRefSeqV5,567 transMapRnaV5,2 transMapRnaV5,5 transMapRnaV5,567 transMapV5,673 xenoRefGene,30 xenoRefGene,242 xenoRefGene,288 rna-seq refSeqComposite,75 refSeqComposite,366 rnas ncbiRefSeqPsl,6 refGene,7 refGene,258 refSeqComposite,54 refSeqComposite,439 refSeqComposite,490 refSeqComposite,1229 xenoRefGene,219 robert chainGalGal3,994 chainGalVar1,1009 chainHg19,991 chainMm10,991 chainMm39,991 chainMonDom4,991 chainNetGalGal3,997 chainNetGalVar1,1012 chainNetHg19,994 chainNetMm10,993 chainNetMm39,994 chainNetMonDom4,994 chainNetOryCun2,994 chainNetRn6,997 chainOryCun2,991 chainRn6,994 nestedRepeats,307 netGalGal3,994 netGalVar1,1009 netHg19,991 netMm10,991 netMm39,991 netMonDom4,991 netOryCun2,991 netRn6,994 nscanGene,258 rmsk,330 tRNAs,351 role uniprot,309 rolling rmsk,201 ronning nscanGene,306 ross chainGalGal3,943 chainGalVar1,958 chainHg19,940 chainMm10,940 chainMm39,940 chainMonDom4,940 chainNetGalGal3,946 chainNetGalVar1,961 chainNetHg19,943 chainNetMm10,942 chainNetMm39,943 chainNetMonDom4,943 chainNetOryCun2,943 chainNetRn6,946 chainOryCun2,940 chainRn6,943 netGalGal3,943 netGalVar1,958 netHg19,940 netMm10,940 netMm39,940 netMonDom4,940 netOryCun2,940 netRn6,943 rotated tRNAs,327 rough tRNAs,258 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 run chainGalGal3,659 chainGalVar1,674 chainHg19,656 chainMm10,656 chainMm39,656 chainMonDom4,656 chainNetGalGal3,662 chainNetGalVar1,677 chainNetHg19,659 chainNetMm10,658 chainNetMm39,659 chainNetMonDom4,659 chainNetOryCun2,659 chainNetRn6,662 chainOryCun2,656 chainRn6,659 netGalGal3,659 netGalVar1,674 netHg19,656 netMm10,656 netMm39,656 netMonDom4,656 netOryCun2,656 netRn6,659 refSeqComposite,1610 windowmaskerSdust,53 rusch nscanGene,308 s augustusGene,104 augustusGene,221 augustusGene,319 blastHg18KG,133 chainGalGal3,1062 chainGalGal3,1079 chainGalGal3,1092 chainGalVar1,1077 chainGalVar1,1094 chainGalVar1,1107 chainHg19,1059 chainHg19,1076 chainHg19,1089 chainMm10,1059 chainMm10,1076 chainMm10,1089 chainMm39,1059 chainMm39,1076 chainMm39,1089 chainMonDom4,1059 chainMonDom4,1076 chainMonDom4,1089 chainNetGalGal3,1065 chainNetGalGal3,1082 chainNetGalGal3,1095 chainNetGalVar1,1080 chainNetGalVar1,1097 chainNetGalVar1,1110 chainNetHg19,1062 chainNetHg19,1079 chainNetHg19,1092 chainNetMm10,1061 chainNetMm10,1078 chainNetMm10,1091 chainNetMm39,1062 chainNetMm39,1079 chainNetMm39,1092 chainNetMonDom4,1062 chainNetMonDom4,1079 chainNetMonDom4,1092 chainNetOryCun2,1062 chainNetOryCun2,1079 chainNetOryCun2,1092 chainNetRn6,1065 chainNetRn6,1082 chainNetRn6,1095 chainOryCun2,1059 chainOryCun2,1076 chainOryCun2,1089 chainRn6,1062 chainRn6,1079 chainRn6,1092 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 genscan,190 genscan,194 genscan,210 nestedRepeats,286 netGalGal3,1062 netGalGal3,1079 netGalGal3,1092 netGalVar1,1077 netGalVar1,1094 netGalVar1,1107 netHg19,1059 netHg19,1076 netHg19,1089 netMm10,1059 netMm10,1076 netMm10,1089 netMm39,1059 netMm39,1076 netMm39,1089 netMonDom4,1059 netMonDom4,1076 netMonDom4,1089 netOryCun2,1059 netOryCun2,1076 netOryCun2,1089 netRn6,1062 netRn6,1079 netRn6,1092 nscanGene,230 refSeqComposite,106 refSeqComposite,319 refSeqComposite,468 refSeqComposite,487 refSeqComposite,1123 refSeqComposite,1208 rmsk,18 rmsk,293 tRNAs,479 transMapEnsemblV5,732 transMapEstV5,701 transMapRefSeqV5,701 transMapRnaV5,701 transMapV5,807 uniprot,751 uniprot,774 s140-8 nscanGene,357 saccharomyces augustusGene,223 safely refSeqComposite,1455 salzberg genscan,189 same chainGalGal3,530 chainGalGal3,545 chainGalVar1,541 chainGalVar1,556 chainHg19,527 chainHg19,542 chainMm10,527 chainMm10,542 chainMm39,527 chainMm39,542 chainMonDom4,527 chainMonDom4,542 chainNetGalGal3,533 chainNetGalGal3,548 chainNetGalVar1,544 chainNetGalVar1,559 chainNetHg19,530 chainNetHg19,545 chainNetMm10,529 chainNetMm10,544 chainNetMm39,530 chainNetMm39,545 chainNetMonDom4,530 chainNetMonDom4,545 chainNetOryCun2,530 chainNetOryCun2,545 chainNetRn6,533 chainNetRn6,548 chainOryCun2,527 chainOryCun2,542 chainRn6,530 chainRn6,545 nestedRepeats,143 netGalGal3,530 netGalGal3,545 netGalVar1,541 netGalVar1,556 netHg19,527 netHg19,542 netMm10,527 netMm10,542 netMm39,527 netMm39,542 netMonDom4,527 netMonDom4,542 netOryCun2,527 netOryCun2,542 netRn6,530 netRn6,545 refSeqComposite,1221 tRNAs,247 uniprot,608 uniprot,612 uniprot,641 uniprot,1173 xenoMrna,124 xenoMrna,129 sample augustusGene,133 sampling augustusGene,129 sanborn transMapEnsemblV5,789 transMapEstV5,758 transMapRefSeqV5,758 transMapRnaV5,758 transMapV5,864 santa chainGalGal3,967 chainGalGal3,1012 chainGalVar1,982 chainGalVar1,1027 chainHg19,964 chainHg19,1009 chainMm10,964 chainMm10,1009 chainMm39,964 chainMm39,1009 chainMonDom4,964 chainMonDom4,1009 chainNetGalGal3,970 chainNetGalGal3,1015 chainNetGalVar1,985 chainNetGalVar1,1030 chainNetHg19,967 chainNetHg19,1012 chainNetMm10,966 chainNetMm10,1011 chainNetMm39,967 chainNetMm39,1012 chainNetMonDom4,967 chainNetMonDom4,1012 chainNetOryCun2,967 chainNetOryCun2,1012 chainNetRn6,970 chainNetRn6,1015 chainOryCun2,964 chainOryCun2,1009 chainRn6,967 chainRn6,1012 netGalGal3,967 netGalGal3,1012 netGalVar1,982 netGalVar1,1027 netHg19,964 netHg19,1009 netMm10,964 netMm10,1009 netMm39,964 netMm39,1009 netMonDom4,964 netMonDom4,1009 netOryCun2,964 netOryCun2,1009 netRn6,967 netRn6,1012 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 sayers est,759 intronEst,843 mrna,476 xenoMrna,550 scaffold gold,50 gold,71 gold,109 scaffolds gold,33 scale HLTOGAannotvHg38v1,363 sch windowmaskerSdust,94 scheib uniprot,2012 schwartz chainGalGal3,934 chainGalGal3,1091 chainGalVar1,949 chainGalVar1,1106 chainHg19,931 chainHg19,1088 chainMm10,931 chainMm10,1088 chainMm39,931 chainMm39,1088 chainMonDom4,931 chainMonDom4,1088 chainNetGalGal3,937 chainNetGalGal3,1094 chainNetGalVar1,952 chainNetGalVar1,1109 chainNetHg19,934 chainNetHg19,1091 chainNetMm10,933 chainNetMm10,1090 chainNetMm39,934 chainNetMm39,1091 chainNetMonDom4,934 chainNetMonDom4,1091 chainNetOryCun2,934 chainNetOryCun2,1091 chainNetRn6,937 chainNetRn6,1094 chainOryCun2,931 chainOryCun2,1088 chainRn6,934 chainRn6,1091 netGalGal3,934 netGalGal3,1091 netGalVar1,949 netGalVar1,1106 netHg19,931 netHg19,1088 netMm10,931 netMm10,1088 netMm39,931 netMm39,1088 netMonDom4,931 netMonDom4,1088 netOryCun2,931 netOryCun2,1088 netRn6,934 netRn6,1091 sci chainGalGal3,1077 chainGalVar1,1092 chainHg19,1074 chainMm10,1074 chainMm39,1074 chainMonDom4,1074 chainNetGalGal3,1080 chainNetGalVar1,1095 chainNetHg19,1077 chainNetMm10,1076 chainNetMm39,1077 chainNetMonDom4,1077 chainNetOryCun2,1077 chainNetRn6,1080 chainOryCun2,1074 chainRn6,1077 netGalGal3,1077 netGalVar1,1092 netHg19,1074 netMm10,1074 netMm39,1074 netMonDom4,1074 netOryCun2,1074 netRn6,1077 science HLTOGAannotvHg38v1,364 genscan,203 scientific refSeqComposite,282 uniprot,37 scientists est,744 intronEst,828 mrna,461 refGene,332 refSeqComposite,1722 transMapEnsemblV5,700 transMapEstV5,669 transMapRefSeqV5,669 transMapRnaV5,669 transMapV5,775 xenoMrna,535 xenoRefGene,293 score chainGalGal3,688 chainGalVar1,703 chainHg19,685 chainMm10,685 chainMm39,685 chainMonDom4,685 chainNetGalGal3,691 chainNetGalVar1,706 chainNetHg19,688 chainNetMm10,687 chainNetMm39,688 chainNetMonDom4,688 chainNetOryCun2,688 chainNetRn6,691 chainOryCun2,685 chainRn6,688 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netGalGal3,688 netGalVar1,703 netHg19,685 netMm10,685 netMm39,685 netMonDom4,685 netOryCun2,685 netRn6,688 quality,20 tRNAs,116 tRNAs,121 tRNAs,259 uniprot,950 uniprot,1116 uniprot,1317 uniprot,1349 uniprot,1491 scores quality,2 quality,7 quality,14 quality,53 quality,88 tRNAs,163 tRNAs,178 tRNAs,198 uniprot,1085 scoring chainGalGal3,80 chainGalGal3,90 chainGalGal3,667 chainGalGal3,684 chainGalGal3,1039 chainGalVar1,84 chainGalVar1,94 chainGalVar1,682 chainGalVar1,699 chainGalVar1,1054 chainHg19,78 chainHg19,88 chainHg19,664 chainHg19,681 chainHg19,1036 chainMm10,78 chainMm10,88 chainMm10,664 chainMm10,681 chainMm10,1036 chainMm39,78 chainMm39,88 chainMm39,664 chainMm39,681 chainMm39,1036 chainMonDom4,78 chainMonDom4,88 chainMonDom4,664 chainMonDom4,681 chainMonDom4,1036 chainNetGalGal3,83 chainNetGalGal3,93 chainNetGalGal3,670 chainNetGalGal3,687 chainNetGalGal3,1042 chainNetGalVar1,87 chainNetGalVar1,97 chainNetGalVar1,685 chainNetGalVar1,702 chainNetGalVar1,1057 chainNetHg19,81 chainNetHg19,91 chainNetHg19,667 chainNetHg19,684 chainNetHg19,1039 chainNetMm10,80 chainNetMm10,90 chainNetMm10,666 chainNetMm10,683 chainNetMm10,1038 chainNetMm39,81 chainNetMm39,91 chainNetMm39,667 chainNetMm39,684 chainNetMm39,1039 chainNetMonDom4,81 chainNetMonDom4,91 chainNetMonDom4,667 chainNetMonDom4,684 chainNetMonDom4,1039 chainNetOryCun2,81 chainNetOryCun2,91 chainNetOryCun2,667 chainNetOryCun2,684 chainNetOryCun2,1039 chainNetRn6,83 chainNetRn6,93 chainNetRn6,670 chainNetRn6,687 chainNetRn6,1042 chainOryCun2,78 chainOryCun2,88 chainOryCun2,664 chainOryCun2,681 chainOryCun2,1036 chainRn6,80 chainRn6,90 chainRn6,667 chainRn6,684 chainRn6,1039 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netGalGal3,80 netGalGal3,90 netGalGal3,667 netGalGal3,684 netGalGal3,1039 netGalVar1,84 netGalVar1,94 netGalVar1,682 netGalVar1,699 netGalVar1,1054 netHg19,78 netHg19,88 netHg19,664 netHg19,681 netHg19,1036 netMm10,78 netMm10,88 netMm10,664 netMm10,681 netMm10,1036 netMm39,78 netMm39,88 netMm39,664 netMm39,681 netMm39,1036 netMonDom4,78 netMonDom4,88 netMonDom4,664 netMonDom4,681 netMonDom4,1036 netOryCun2,78 netOryCun2,88 netOryCun2,664 netOryCun2,681 netOryCun2,1036 netRn6,80 netRn6,90 netRn6,667 netRn6,684 netRn6,1039 tRNAs,294 scott chainGalGal3,933 chainGalVar1,948 chainHg19,930 chainMm10,930 chainMm39,930 chainMonDom4,930 chainNetGalGal3,936 chainNetGalVar1,951 chainNetHg19,933 chainNetMm10,932 chainNetMm39,933 chainNetMonDom4,933 chainNetOryCun2,933 chainNetRn6,936 chainOryCun2,930 chainRn6,933 netGalGal3,933 netGalVar1,948 netHg19,930 netMm10,930 netMm39,930 netMonDom4,930 netOryCun2,930 netRn6,933 screens nestedRepeats,32 rmsk,22 script uniprot,1549 scrna rmsk,193 sdust windowmaskerSdust,2 windowmaskerSdust,8 windowmaskerSdust,68 search blastHg18KG,168 tRNAs,62 transMapEnsemblV5,801 transMapEstV5,770 transMapRefSeqV5,770 transMapRnaV5,770 transMapV5,876 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 searls genscan,191 second xenoMrna,93 secondary tRNAs,76 tRNAs,236 tRNAs,314 tRNAs,323 tRNAs,343 unipStruct,5 uniprot,361 secreted uniprot,247 section ensGene,53 genscan,153 nestedRepeats,67 refSeqComposite,92 refSeqComposite,1655 rmsk,103 uniprot,897 sections chainGalGal3,814 chainGalVar1,829 chainHg19,811 chainMm10,811 chainMm39,811 chainMonDom4,811 chainNetGalGal3,817 chainNetGalVar1,832 chainNetHg19,814 chainNetMm10,813 chainNetMm39,814 chainNetMonDom4,814 chainNetOryCun2,814 chainNetRn6,817 chainOryCun2,811 chainRn6,814 netGalGal3,814 netGalVar1,829 netHg19,811 netMm10,811 netMm39,811 netMonDom4,811 netOryCun2,811 netRn6,814 see augustusGene,42 blastHg18KG,154 ensGene,25 ensGene,161 genscan,57 intronEst,124 microsat,101 nestedRepeats,296 nestedRepeats,370 refGene,78 refGene,248 refSeqComposite,89 refSeqComposite,137 refSeqComposite,337 refSeqComposite,545 rmsk,319 rmsk,393 simpleRepeat,63 transMapEnsemblV5,231 transMapEnsemblV5,574 transMapEstV5,200 transMapEstV5,543 transMapRefSeqV5,200 transMapRefSeqV5,543 transMapRnaV5,200 transMapRnaV5,543 transMapV5,306 transMapV5,649 uniprot,188 uniprot,526 uniprot,768 uniprot,894 xenoRefGene,209 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select genscan,90 refGene,201 refSeqComposite,514 refSeqComposite,531 refSeqComposite,535 refSeqComposite,548 refSeqComposite,838 xenoRefGene,162 selected est,296 est,312 est,365 intronEst,377 intronEst,393 intronEst,446 mrna,242 mrna,258 mrna,311 refSeqComposite,160 transMapEnsemblV5,214 transMapEnsemblV5,251 transMapEnsemblV5,262 transMapEnsemblV5,330 transMapEstV5,183 transMapEstV5,220 transMapEstV5,231 transMapEstV5,299 transMapRefSeqV5,183 transMapRefSeqV5,220 transMapRefSeqV5,231 transMapRefSeqV5,299 transMapRnaV5,183 transMapRnaV5,220 transMapRnaV5,231 transMapRnaV5,299 transMapV5,289 transMapV5,326 transMapV5,337 transMapV5,405 uniprot,986 xenoMrna,316 xenoMrna,332 xenoMrna,385 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sensitivity transMapV5,148 sep chainGalGal3,1082 chainGalVar1,1097 chainHg19,1079 chainMm10,1079 chainMm39,1079 chainMonDom4,1079 chainNetGalGal3,1085 chainNetGalVar1,1100 chainNetHg19,1082 chainNetMm10,1081 chainNetMm39,1082 chainNetMonDom4,1082 chainNetOryCun2,1082 chainNetRn6,1085 chainOryCun2,1079 chainRn6,1082 nestedRepeats,356 netGalGal3,1082 netGalVar1,1097 netHg19,1079 netMm10,1079 netMm39,1079 netMonDom4,1079 netOryCun2,1079 netRn6,1082 rmsk,379 separate nscanGene,129 separated est,267 intronEst,348 mrna,213 xenoMrna,287 seq unipConflict,1 sequence HLTOGAannotvHg38v1,150 HLTOGAannotvHg38v1,309 augustusGene,32 augustusGene,70 blastHg18KG,76 chainGalGal3,171 chainGalGal3,300 chainGalGal3,1042 chainGalVar1,179 chainGalVar1,312 chainGalVar1,1057 chainHg19,169 chainHg19,298 chainHg19,1039 chainMm10,169 chainMm10,298 chainMm10,1039 chainMm39,169 chainMm39,298 chainMm39,1039 chainMonDom4,169 chainMonDom4,298 chainMonDom4,1039 chainNetGalGal3,174 chainNetGalGal3,303 chainNetGalGal3,1045 chainNetGalVar1,182 chainNetGalVar1,315 chainNetGalVar1,1060 chainNetHg19,172 chainNetHg19,301 chainNetHg19,1042 chainNetMm10,171 chainNetMm10,300 chainNetMm10,1041 chainNetMm39,172 chainNetMm39,301 chainNetMm39,1042 chainNetMonDom4,172 chainNetMonDom4,301 chainNetMonDom4,1042 chainNetOryCun2,172 chainNetOryCun2,301 chainNetOryCun2,1042 chainNetRn6,174 chainNetRn6,303 chainNetRn6,1045 chainOryCun2,169 chainOryCun2,298 chainOryCun2,1039 chainRn6,171 chainRn6,300 chainRn6,1042 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 est,21 est,92 est,401 est,410 est,584 est,722 est,734 est,741 gap,124 intronEst,22 intronEst,75 intronEst,173 intronEst,482 intronEst,491 intronEst,665 intronEst,803 intronEst,818 intronEst,825 mrna,347 mrna,438 mrna,451 mrna,458 netGalGal3,171 netGalGal3,300 netGalGal3,1042 netGalVar1,179 netGalVar1,312 netGalVar1,1057 netHg19,169 netHg19,298 netHg19,1039 netMm10,169 netMm10,298 netMm10,1039 netMm39,169 netMm39,298 netMm39,1039 netMonDom4,169 netMonDom4,298 netMonDom4,1039 netOryCun2,169 netOryCun2,298 netOryCun2,1039 netRn6,171 netRn6,300 netRn6,1042 nscanGene,47 nscanGene,83 nscanGene,125 nscanGene,139 refGene,316 refGene,328 refGene,410 refGene,415 refSeqComposite,655 refSeqComposite,666 refSeqComposite,882 refSeqComposite,982 refSeqComposite,1010 refSeqComposite,1037 refSeqComposite,1049 refSeqComposite,1082 refSeqComposite,1086 refSeqComposite,1091 refSeqComposite,1287 refSeqComposite,1800 refSeqComposite,1805 rmsk,48 rmsk,62 tRNAs,74 tRNAs,182 tRNAs,380 tRNAs,399 tRNAs,456 transMapEnsemblV5,129 transMapEnsemblV5,690 transMapEnsemblV5,697 transMapEstV5,98 transMapEstV5,659 transMapEstV5,666 transMapRefSeqV5,98 transMapRefSeqV5,659 transMapRefSeqV5,666 transMapRnaV5,98 transMapRnaV5,659 transMapRnaV5,666 transMapV5,204 transMapV5,765 transMapV5,772 ucscToRefSeq,24 unipConflict,4 uniprot,356 uniprot,372 uniprot,381 uniprot,387 uniprot,636 uniprot,967 uniprot,971 uniprot,1134 uniprot,1219 uniprot,1242 uniprot,1379 uniprot,2035 windowmaskerSdust,17 xenoMrna,79 xenoMrna,103 xenoMrna,111 xenoMrna,421 xenoMrna,512 xenoMrna,525 xenoMrna,532 xenoRefGene,277 xenoRefGene,289 xenoRefGene,370 xenoRefGene,375 sequence-to-gene refSeqComposite,684 sequenced windowmaskerSdust,104 sequences blastHg18KG,64 est,32 est,603 est,611 intronEst,43 intronEst,684 intronEst,692 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 nscanGene,76 nscanGene,94 refGene,34 refGene,53 refGene,388 refSeqComposite,31 refSeqComposite,112 refSeqComposite,270 refSeqComposite,286 refSeqComposite,887 refSeqComposite,1097 refSeqComposite,1661 refSeqComposite,1778 rmsk,24 rmsk,32 simpleRepeat,84 tRNAs,428 uniprot,16 uniprot,85 uniprot,112 uniprot,114 uniprot,131 uniprot,138 uniprot,166 uniprot,195 uniprot,197 uniprot,377 uniprot,673 uniprot,781 uniprot,1103 uniprot,1374 uniprot,1424 uniprot,1608 uniprot,1611 uniprot,1889 xenoMrna,116 xenoRefGene,32 xenoRefGene,348 sequencing chainGalGal3,896 chainGalVar1,911 chainHg19,893 chainMm10,893 chainMm39,893 chainMonDom4,893 chainNetGalGal3,899 chainNetGalVar1,914 chainNetHg19,896 chainNetMm10,895 chainNetMm39,896 chainNetMonDom4,896 chainNetOryCun2,896 chainNetRn6,899 chainOryCun2,893 chainRn6,896 cytoBandIdeo,9 gap,6 gc5Base,10 gold,7 netGalGal3,896 netGalVar1,911 netHg19,893 netMm10,893 netMm39,893 netMonDom4,893 netOryCun2,893 netRn6,896 quality,5 quality,10 quality,18 ucscToRefSeq,7 server ensGene,144 refSeqComposite,1329 refSeqComposite,1335 refSeqComposite,1351 refSeqComposite,1490 refSeqComposite,1605 refSeqComposite,1632 refSeqComposite,1684 refSeqComposite,1710 transMapEnsemblV5,561 transMapEstV5,530 transMapRefSeqV5,530 transMapRnaV5,530 transMapV5,636 uniprot,1699 uniprot,1745 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 ensGene,116 set blastHg18KG,148 gap,121 gap,131 refSeqComposite,161 refSeqComposite,1500 refSeqComposite,1637 refSeqComposite,1700 tRNAs,71 transMapEnsemblV5,281 transMapEstV5,250 transMapRefSeqV5,250 transMapRnaV5,250 transMapV5,356 uniprot,838 uniprot,858 uniprot,1287 uniprot,1597 sets augustusGene,158 refSeqComposite,155 setting refSeqComposite,1041 refSeqComposite,1068 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 refSeqComposite,746 several HLTOGAannotvHg38v1,274 est,426 intronEst,507 mrna,365 transMapEnsemblV5,138 transMapEstV5,107 transMapRefSeqV5,107 transMapRnaV5,107 transMapV5,213 xenoMrna,439 sf blastHg18KG,156 shade nestedRepeats,194 shaded est,70 mrna,51 nestedRepeats,182 xenoMrna,55 shades nestedRepeats,202 shading intronEst,149 nestedRepeats,240 refGene,98 refSeqComposite,608 rmsk,208 rmsk,239 xenoRefGene,59 sharma HLTOGAannotvHg38v1,342 shift refSeqComposite,962 shifted refSeqComposite,971 refSeqComposite,1018 short refSeqComposite,929 rmsk,153 uniprot,460 uniprot,978 shortgap refSeqComposite,965 shotgun gap,98 gap,141 gold,21 gold,140 should est,332 est,636 intronEst,413 intronEst,717 mrna,278 tRNAs,226 xenoMrna,352 show intronEst,31 intronEst,64 refGene,164 refSeqComposite,157 refSeqComposite,791 refSeqComposite,906 refSeqComposite,920 uniprot,80 uniprot,227 uniprot,538 xenoRefGene,125 showing refSeqComposite,960 shown HLTOGAannotvHg38v1,136 chainGalGal3,42 chainGalGal3,55 chainGalVar1,45 chainGalVar1,58 chainHg19,41 chainHg19,54 chainMm10,41 chainMm10,54 chainMm39,41 chainMm39,54 chainMonDom4,41 chainMonDom4,54 chainNetGalGal3,45 chainNetGalGal3,58 chainNetGalVar1,48 chainNetGalVar1,61 chainNetHg19,44 chainNetHg19,57 chainNetMm10,43 chainNetMm10,56 chainNetMm39,44 chainNetMm39,57 chainNetMonDom4,44 chainNetMonDom4,57 chainNetOryCun2,44 chainNetOryCun2,57 chainNetRn6,45 chainNetRn6,58 chainOryCun2,41 chainOryCun2,54 chainRn6,42 chainRn6,55 est,150 gold,92 intronEst,231 microsat,48 mrna,96 netGalGal3,42 netGalGal3,55 netGalVar1,45 netGalVar1,58 netHg19,41 netHg19,54 netMm10,41 netMm10,54 netMm39,41 netMm39,54 netMonDom4,41 netMonDom4,54 netOryCun2,41 netOryCun2,54 netRn6,42 netRn6,55 uniprot,504 uniprot,628 uniprot,646 uniprot,1580 uniprot,1631 xenoMrna,170 shows augustusGene,15 augustusGene,108 chainGalGal3,16 chainGalGal3,63 chainGalGal3,269 chainGalVar1,19 chainGalVar1,66 chainGalVar1,277 chainHg19,15 chainHg19,62 chainHg19,267 chainMm10,15 chainMm10,62 chainMm10,267 chainMm39,15 chainMm39,62 chainMm39,267 chainMonDom4,15 chainMonDom4,62 chainMonDom4,267 chainNetGalGal3,19 chainNetGalGal3,66 chainNetGalGal3,272 chainNetGalVar1,22 chainNetGalVar1,69 chainNetGalVar1,280 chainNetHg19,18 chainNetHg19,65 chainNetHg19,270 chainNetMm10,17 chainNetMm10,64 chainNetMm10,269 chainNetMm39,18 chainNetMm39,65 chainNetMm39,270 chainNetMonDom4,18 chainNetMonDom4,65 chainNetMonDom4,270 chainNetOryCun2,18 chainNetOryCun2,65 chainNetOryCun2,270 chainNetRn6,19 chainNetRn6,66 chainNetRn6,272 chainOryCun2,15 chainOryCun2,62 chainOryCun2,267 chainRn6,16 chainRn6,63 chainRn6,269 est,15 gc5Base,16 genscan,13 gold,11 intronEst,16 mrna,16 nestedRepeats,17 nestedRepeats,81 netGalGal3,16 netGalGal3,63 netGalGal3,269 netGalVar1,19 netGalVar1,66 netGalVar1,277 netHg19,15 netHg19,62 netHg19,267 netMm10,15 netMm10,62 netMm10,267 netMm39,15 netMm39,62 netMm39,267 netMonDom4,15 netMonDom4,62 netMonDom4,267 netOryCun2,15 netOryCun2,62 netOryCun2,267 netRn6,16 netRn6,63 netRn6,269 nscanGene,12 quality,16 refGene,20 refSeqComposite,18 refSeqComposite,1004 refSeqComposite,1015 uniprot,14 uniprot,484 xenoRefGene,14 side est,599 gap,55 intronEst,680 siepel transMapEnsemblV5,714 transMapEstV5,683 transMapRefSeqV5,683 transMapRnaV5,683 transMapV5,789 signal augustusGene,48 augustusGene,63 unipLocSignal,1 unipLocSignal,4 uniprot,238 uniprot,476 uniprot,511 uniprot,564 signals genscan,34 genscan,187 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 signs intronEst,32 similar nestedRepeats,199 nscanGene,121 uniprot,1403 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainGalGal3,103 chainGalVar1,109 chainHg19,101 chainMm10,101 chainMm39,101 chainMonDom4,101 chainNetGalGal3,106 chainNetGalVar1,112 chainNetHg19,104 chainNetMm10,103 chainNetMm39,104 chainNetMonDom4,104 chainNetOryCun2,104 chainNetRn6,106 chainOryCun2,101 chainRn6,103 netGalGal3,103 netGalVar1,109 netHg19,101 netMm10,101 netMm39,101 netMonDom4,101 netOryCun2,101 netRn6,103 since chainGalGal3,579 chainGalVar1,590 chainHg19,576 chainMm10,576 chainMm39,576 chainMonDom4,576 chainNetGalGal3,582 chainNetGalVar1,593 chainNetHg19,579 chainNetMm10,578 chainNetMm39,579 chainNetMonDom4,579 chainNetOryCun2,579 chainNetRn6,582 chainOryCun2,576 chainRn6,579 netGalGal3,579 netGalVar1,590 netHg19,576 netMm10,576 netMm39,576 netMonDom4,576 netOryCun2,576 netRn6,579 uniprot,1383 sine rmsk,157 sines tRNAs,150 single blastHg18KG,101 chainGalGal3,130 chainGalGal3,139 chainGalGal3,629 chainGalGal3,634 chainGalVar1,136 chainGalVar1,145 chainGalVar1,642 chainGalVar1,649 chainHg19,128 chainHg19,137 chainHg19,626 chainHg19,631 chainMm10,128 chainMm10,137 chainMm10,626 chainMm10,631 chainMm39,128 chainMm39,137 chainMm39,626 chainMm39,631 chainMonDom4,128 chainMonDom4,137 chainMonDom4,626 chainMonDom4,631 chainNetGalGal3,133 chainNetGalGal3,142 chainNetGalGal3,632 chainNetGalGal3,637 chainNetGalVar1,139 chainNetGalVar1,148 chainNetGalVar1,645 chainNetGalVar1,652 chainNetHg19,131 chainNetHg19,140 chainNetHg19,629 chainNetHg19,634 chainNetMm10,130 chainNetMm10,139 chainNetMm10,628 chainNetMm10,633 chainNetMm39,131 chainNetMm39,140 chainNetMm39,629 chainNetMm39,634 chainNetMonDom4,131 chainNetMonDom4,140 chainNetMonDom4,629 chainNetMonDom4,634 chainNetOryCun2,131 chainNetOryCun2,140 chainNetOryCun2,629 chainNetOryCun2,634 chainNetRn6,133 chainNetRn6,142 chainNetRn6,632 chainNetRn6,637 chainOryCun2,128 chainOryCun2,137 chainOryCun2,626 chainOryCun2,631 chainRn6,130 chainRn6,139 chainRn6,629 chainRn6,634 est,633 est,686 intronEst,714 intronEst,767 mrna,402 nestedRepeats,178 netGalGal3,130 netGalGal3,139 netGalGal3,629 netGalGal3,634 netGalVar1,136 netGalVar1,145 netGalVar1,642 netGalVar1,649 netHg19,128 netHg19,137 netHg19,626 netHg19,631 netMm10,128 netMm10,137 netMm10,626 netMm10,631 netMm39,128 netMm39,137 netMm39,626 netMm39,631 netMonDom4,128 netMonDom4,137 netMonDom4,626 netMonDom4,631 netOryCun2,128 netOryCun2,137 netOryCun2,626 netOryCun2,631 netRn6,130 netRn6,139 netRn6,629 netRn6,634 refGene,280 refSeqComposite,534 refSeqComposite,1251 transMapEnsemblV5,480 transMapEstV5,449 transMapRefSeqV5,449 transMapRnaV5,449 transMapV5,555 uniprot,141 xenoMrna,475 xenoRefGene,241 single-lined chainGalGal3,212 chainGalVar1,220 chainHg19,210 chainMm10,210 chainMm39,210 chainMonDom4,210 chainNetGalGal3,215 chainNetGalVar1,223 chainNetHg19,213 chainNetMm10,212 chainNetMm39,213 chainNetMonDom4,213 chainNetOryCun2,213 chainNetRn6,215 chainOryCun2,210 chainRn6,212 netGalGal3,212 netGalVar1,220 netHg19,210 netMm10,210 netMm39,210 netMonDom4,210 netOryCun2,210 netRn6,212 single-read est,31 intronEst,42 site genscan,157 windowmaskerSdust,45 sites augustusGene,54 augustusGene,59 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 nscanGene,144 nscanGene,206 refSeqComposite,272 uniprot,342 uniprot,354 uniprot,578 uniprot,585 size blastHg18KG,95 sizes gap,148 gold,45 skepticism est,641 intronEst,722 skip refSeqComposite,1034 skipped refSeqComposite,1047 sm nscanGene,296 refGene,365 refSeqComposite,1755 xenoRefGene,325 small refSeqComposite,937 smallsize chainGalGal3,714 chainGalVar1,729 chainHg19,711 chainMm10,711 chainMm39,711 chainMonDom4,711 chainNetGalGal3,717 chainNetGalVar1,732 chainNetHg19,714 chainNetMm10,713 chainNetMm39,714 chainNetMonDom4,714 chainNetOryCun2,714 chainNetRn6,717 chainOryCun2,711 chainRn6,714 netGalGal3,714 netGalVar1,729 netHg19,711 netMm10,711 netMm39,711 netMonDom4,711 netOryCun2,711 netRn6,714 smit chainGalGal3,951 chainGalGal3,1095 chainGalVar1,966 chainGalVar1,1110 chainHg19,948 chainHg19,1092 chainMm10,948 chainMm10,1092 chainMm39,948 chainMm39,1092 chainMonDom4,948 chainMonDom4,1092 chainNetGalGal3,954 chainNetGalGal3,1098 chainNetGalVar1,969 chainNetGalVar1,1113 chainNetHg19,951 chainNetHg19,1095 chainNetMm10,950 chainNetMm10,1094 chainNetMm39,951 chainNetMm39,1095 chainNetMonDom4,951 chainNetMonDom4,1095 chainNetOryCun2,951 chainNetOryCun2,1095 chainNetRn6,954 chainNetRn6,1098 chainOryCun2,948 chainOryCun2,1092 chainRn6,951 chainRn6,1095 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netGalGal3,951 netGalGal3,1095 netGalVar1,966 netGalVar1,1110 netHg19,948 netHg19,1092 netMm10,948 netMm10,1092 netMm39,948 netMm39,1092 netMonDom4,948 netMonDom4,1092 netOryCun2,948 netOryCun2,1092 netRn6,951 netRn6,1095 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 smith nscanGene,299 snrna rmsk,192 so chainGalGal3,443 chainGalVar1,454 chainHg19,440 chainMm10,440 chainMm39,440 chainMonDom4,440 chainNetGalGal3,446 chainNetGalVar1,457 chainNetHg19,443 chainNetMm10,442 chainNetMm39,443 chainNetMonDom4,443 chainNetOryCun2,443 chainNetRn6,446 chainOryCun2,440 chainRn6,443 netGalGal3,443 netGalVar1,454 netHg19,440 netMm10,440 netMm39,440 netMonDom4,440 netOryCun2,440 netRn6,443 refSeqComposite,302 refSeqComposite,1616 tRNAs,277 uniprot,1135 uniprot,1430 society refSeqComposite,1079 soft-masked rmsk,305 software HLTOGAannotvHg38v1,327 nestedRepeats,255 nscanGene,21 refSeqComposite,377 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 est,158 est,555 est,571 est,674 intronEst,239 intronEst,636 intronEst,652 intronEst,755 mrna,104 nestedRepeats,207 refSeqComposite,660 refSeqComposite,708 rmsk,105 rmsk,268 transMapEnsemblV5,299 transMapEnsemblV5,309 transMapEstV5,268 transMapEstV5,278 transMapRefSeqV5,268 transMapRefSeqV5,278 transMapRnaV5,268 transMapRnaV5,278 transMapV5,374 transMapV5,384 uniprot,318 xenoMrna,178 sometimes simpleRepeat,50 uniprot,983 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainGalGal3,783 chainGalVar1,798 chainHg19,780 chainMm10,780 chainMm39,780 chainMonDom4,780 chainNetGalGal3,786 chainNetGalVar1,801 chainNetHg19,783 chainNetMm10,782 chainNetMm39,783 chainNetMonDom4,783 chainNetOryCun2,783 chainNetRn6,786 chainOryCun2,780 chainRn6,783 netGalGal3,783 netGalVar1,798 netHg19,780 netMm10,780 netMm39,780 netMonDom4,780 netOryCun2,780 netRn6,783 uniprot,556 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 refSeqComposite,1517 transMapEnsemblV5,153 transMapEnsemblV5,325 transMapEnsemblV5,343 transMapEnsemblV5,407 transMapEnsemblV5,432 transMapEnsemblV5,623 transMapEnsemblV5,637 transMapEstV5,122 transMapEstV5,294 transMapEstV5,312 transMapEstV5,376 transMapEstV5,401 transMapEstV5,592 transMapEstV5,606 transMapRefSeqV5,122 transMapRefSeqV5,294 transMapRefSeqV5,312 transMapRefSeqV5,376 transMapRefSeqV5,401 transMapRefSeqV5,592 transMapRefSeqV5,606 transMapRnaV5,122 transMapRnaV5,294 transMapRnaV5,312 transMapRnaV5,376 transMapRnaV5,401 transMapRnaV5,592 transMapRnaV5,606 transMapV5,228 transMapV5,400 transMapV5,418 transMapV5,482 transMapV5,507 transMapV5,698 transMapV5,712 uniprot,820 uniprot,1545 uniprot,1774 uniprot,1788 windowmaskerSdust,33 sources transMapEnsemblV5,48 transMapEnsemblV5,66 space est,270 intronEst,351 mrna,216 uniprot,1990 xenoMrna,290 spaces gold,90 span chainGalGal3,402 chainGalVar1,413 chainHg19,399 chainMm10,399 chainMm39,399 chainMonDom4,399 chainNetGalGal3,405 chainNetGalVar1,416 chainNetHg19,402 chainNetMm10,401 chainNetMm39,402 chainNetMonDom4,402 chainNetOryCun2,402 chainNetRn6,405 chainOryCun2,399 chainRn6,402 netGalGal3,402 netGalVar1,413 netHg19,399 netMm10,399 netMm39,399 netMonDom4,399 netOryCun2,399 netRn6,402 refSeqComposite,1006 special nscanGene,243 specialized simpleRepeat,29 species HLTOGAannotvHg38v1,52 HLTOGAannotvHg38v1,127 augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainGalGal3,120 chainGalGal3,174 chainGalGal3,193 chainGalGal3,902 chainGalVar1,126 chainGalVar1,182 chainGalVar1,201 chainGalVar1,917 chainHg19,118 chainHg19,172 chainHg19,191 chainHg19,899 chainMm10,118 chainMm10,172 chainMm10,191 chainMm10,899 chainMm39,118 chainMm39,172 chainMm39,191 chainMm39,899 chainMonDom4,118 chainMonDom4,172 chainMonDom4,191 chainMonDom4,899 chainNetGalGal3,123 chainNetGalGal3,177 chainNetGalGal3,196 chainNetGalGal3,905 chainNetGalVar1,129 chainNetGalVar1,185 chainNetGalVar1,204 chainNetGalVar1,920 chainNetHg19,121 chainNetHg19,175 chainNetHg19,194 chainNetHg19,902 chainNetMm10,120 chainNetMm10,174 chainNetMm10,193 chainNetMm10,901 chainNetMm39,121 chainNetMm39,175 chainNetMm39,194 chainNetMm39,902 chainNetMonDom4,121 chainNetMonDom4,175 chainNetMonDom4,194 chainNetMonDom4,902 chainNetOryCun2,121 chainNetOryCun2,175 chainNetOryCun2,194 chainNetOryCun2,902 chainNetRn6,123 chainNetRn6,177 chainNetRn6,196 chainNetRn6,905 chainOryCun2,118 chainOryCun2,172 chainOryCun2,191 chainOryCun2,899 chainRn6,120 chainRn6,174 chainRn6,193 chainRn6,902 netGalGal3,120 netGalGal3,174 netGalGal3,193 netGalGal3,902 netGalVar1,126 netGalVar1,182 netGalVar1,201 netGalVar1,917 netHg19,118 netHg19,172 netHg19,191 netHg19,899 netMm10,118 netMm10,172 netMm10,191 netMm10,899 netMm39,118 netMm39,172 netMm39,191 netMm39,899 netMonDom4,118 netMonDom4,172 netMonDom4,191 netMonDom4,899 netOryCun2,118 netOryCun2,172 netOryCun2,191 netOryCun2,899 netRn6,120 netRn6,174 netRn6,193 netRn6,902 transMapEnsemblV5,32 transMapEnsemblV5,271 transMapEstV5,30 transMapEstV5,240 transMapRefSeqV5,30 transMapRefSeqV5,240 transMapRnaV5,30 transMapRnaV5,240 transMapV5,29 transMapV5,79 transMapV5,115 transMapV5,346 species-specific augustusGene,156 specific est,197 intronEst,278 mrna,143 simpleRepeat,53 tRNAs,70 tRNAs,233 tRNAs,270 xenoMrna,217 specify refSeqComposite,1114 speed refSeqComposite,1443 splice augustusGene,53 genscan,156 nscanGene,143 nscanGene,205 refSeqComposite,271 uniprot,144 spliced intronEst,1 intronEst,9 intronEst,60 transMapEnsemblV5,176 transMapEstV5,17 transMapEstV5,145 transMapRefSeqV5,145 transMapRnaV5,145 transMapV5,251 splicing augustusGene,123 genscan,33 genscan,186 intronEst,34 intronEst,95 split chainGalGal3,584 chainGalVar1,597 chainHg19,581 chainMm10,581 chainMm39,581 chainMonDom4,581 chainNetGalGal3,587 chainNetGalVar1,600 chainNetHg19,584 chainNetMm10,583 chainNetMm39,584 chainNetMonDom4,584 chainNetOryCun2,584 chainNetRn6,587 chainOryCun2,581 chainRn6,584 netGalGal3,584 netGalVar1,597 netHg19,581 netMm10,581 netMm39,581 netMonDom4,581 netOryCun2,581 netRn6,584 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 sr tRNAs,395 tRNAs,443 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srcuniq transMapEnsemblV5,424 transMapEstV5,393 transMapRefSeqV5,393 transMapRnaV5,393 transMapV5,499 srprna rmsk,194 ss nscanGene,271 st nscanGene,32 nscanGene,237 staff refSeqComposite,643 refSeqComposite,694 uniprot,42 uniprot,1965 stage uniprot,1228 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 transMapEnsemblV5,757 transMapEstV5,726 transMapRefSeqV5,726 transMapRnaV5,726 transMapV5,832 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 est,563 intronEst,644 refSeqComposite,1559 transMapEnsemblV5,671 transMapEstV5,640 transMapRefSeqV5,640 transMapRnaV5,640 transMapV5,746 uniprot,125 uniprot,209 uniprot,1821 state chainGalGal3,928 chainGalGal3,1031 chainGalVar1,943 chainGalVar1,1046 chainHg19,925 chainHg19,1028 chainMm10,925 chainMm10,1028 chainMm39,925 chainMm39,1028 chainMonDom4,925 chainMonDom4,1028 chainNetGalGal3,931 chainNetGalGal3,1034 chainNetGalVar1,946 chainNetGalVar1,1049 chainNetHg19,928 chainNetHg19,1031 chainNetMm10,927 chainNetMm10,1030 chainNetMm39,928 chainNetMm39,1031 chainNetMonDom4,928 chainNetMonDom4,1031 chainNetOryCun2,928 chainNetOryCun2,1031 chainNetRn6,931 chainNetRn6,1034 chainOryCun2,925 chainOryCun2,1028 chainRn6,928 chainRn6,1031 netGalGal3,928 netGalGal3,1031 netGalVar1,943 netGalVar1,1046 netHg19,925 netHg19,1028 netMm10,925 netMm10,1028 netMm39,925 netMm39,1028 netMonDom4,925 netMonDom4,1028 netOryCun2,925 netOryCun2,1028 netRn6,928 netRn6,1031 statistical augustusGene,47 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 refSeqComposite,1563 transMapEnsemblV5,675 transMapEstV5,644 transMapRefSeqV5,644 transMapRnaV5,644 transMapV5,750 uniprot,1825 stefanie augustusGene,267 step transMapEnsemblV5,307 transMapEstV5,276 transMapRefSeqV5,276 transMapRnaV5,276 transMapV5,382 uniprot,901 uniprot,1155 uniprot,1330 stevens transMapEnsemblV5,723 transMapEstV5,692 transMapRefSeqV5,692 transMapRnaV5,692 transMapV5,798 still tRNAs,142 storage chainGalGal3,985 chainGalVar1,1000 chainHg19,982 chainMm10,982 chainMm39,982 chainMonDom4,982 chainNetGalGal3,988 chainNetGalVar1,1003 chainNetHg19,985 chainNetMm10,984 chainNetMm39,985 chainNetMonDom4,985 chainNetOryCun2,985 chainNetRn6,988 chainOryCun2,982 chainRn6,985 netGalGal3,985 netGalVar1,1000 netHg19,982 netMm10,982 netMm39,982 netMonDom4,982 netOryCun2,982 netRn6,985 stored refSeqComposite,1479 transMapEnsemblV5,544 transMapEstV5,513 transMapRefSeqV5,513 transMapRnaV5,513 transMapV5,619 uniprot,1733 strand chainGalGal3,252 chainGalVar1,260 chainHg19,250 chainMm10,250 chainMm39,250 chainMonDom4,250 chainNetGalGal3,255 chainNetGalVar1,263 chainNetHg19,253 chainNetMm10,252 chainNetMm39,253 chainNetMonDom4,253 chainNetOryCun2,253 chainNetRn6,255 chainOryCun2,250 chainRn6,252 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 est,77 intronEst,158 nestedRepeats,144 nestedRepeats,155 netGalGal3,252 netGalVar1,260 netHg19,250 netMm10,250 netMm39,250 netMonDom4,250 netOryCun2,250 netRn6,252 xenoMrna,62 strands uniprot,365 strategy uniprot,1120 uniprot,1193 stringency transMapV5,120 strong HLTOGAannotvHg38v1,253 HLTOGAannotvHg38v1,282 structural tRNAs,184 structure augustusGene,113 nscanGene,19 nscanGene,350 tRNAs,77 tRNAs,237 tRNAs,315 unipStruct,1 unipStruct,6 uniprot,362 uniprot,2037 structures augustusGene,164 genscan,215 tRNAs,324 tRNAs,344 studies tRNAs,272 studying chainGalGal3,295 chainGalVar1,305 chainHg19,293 chainMm10,293 chainMm39,293 chainMonDom4,293 chainNetGalGal3,298 chainNetGalVar1,308 chainNetHg19,296 chainNetMm10,295 chainNetMm39,296 chainNetMonDom4,296 chainNetOryCun2,296 chainNetRn6,298 chainOryCun2,293 chainRn6,295 netGalGal3,295 netGalVar1,305 netHg19,293 netMm10,293 netMm39,293 netMonDom4,293 netOryCun2,293 netRn6,295 subcellular uniprot,553 subject refSeqComposite,678 refSeqComposite,703 submit refGene,59 refSeqComposite,118 submitted est,736 intronEst,820 mrna,453 transMapEnsemblV5,692 transMapEstV5,661 transMapRefSeqV5,661 transMapRnaV5,661 transMapV5,767 xenoMrna,527 submodel augustusGene,331 subsections chainGalGal3,649 chainGalVar1,664 chainHg19,646 chainMm10,646 chainMm39,646 chainMonDom4,646 chainNetGalGal3,652 chainNetGalVar1,667 chainNetHg19,649 chainNetMm10,648 chainNetMm39,649 chainNetMonDom4,649 chainNetOryCun2,649 chainNetRn6,652 chainOryCun2,646 chainRn6,649 netGalGal3,649 netGalVar1,664 netHg19,646 netMm10,646 netMm39,646 netMonDom4,646 netOryCun2,646 netRn6,649 subsequent transMapEnsemblV5,442 transMapEstV5,411 transMapRefSeqV5,411 transMapRnaV5,411 transMapV5,517 subset est,136 intronEst,217 microsat,54 mrna,82 ncbiRefSeqCurated,7 ncbiRefSeqPredicted,7 refSeqComposite,212 refSeqComposite,342 refSeqComposite,515 refSeqComposite,520 refSeqComposite,551 refSeqComposite,553 refSeqComposite,583 refSeqComposite,795 transMapEnsemblV5,208 transMapEstV5,177 transMapRefSeqV5,177 transMapRnaV5,177 transMapV5,283 xenoMrna,156 substantial chainGalGal3,170 chainGalVar1,178 chainHg19,168 chainMm10,168 chainMm39,168 chainMonDom4,168 chainNetGalGal3,173 chainNetGalVar1,181 chainNetHg19,171 chainNetMm10,170 chainNetMm39,171 chainNetMonDom4,171 chainNetOryCun2,171 chainNetRn6,173 chainOryCun2,168 chainRn6,170 netGalGal3,170 netGalVar1,178 netHg19,168 netMm10,168 netMm39,168 netMonDom4,168 netOryCun2,168 netRn6,170 substitution nscanGene,96 subtrack refSeqComposite,750 refSeqComposite,762 uniprot,411 subtracks chainGalGal3,30 chainGalGal3,37 chainGalVar1,33 chainGalVar1,40 chainHg19,29 chainHg19,36 chainMm10,29 chainMm10,36 chainMm39,29 chainMm39,36 chainMonDom4,29 chainMonDom4,36 chainNetGalGal3,33 chainNetGalGal3,40 chainNetGalVar1,36 chainNetGalVar1,43 chainNetHg19,32 chainNetHg19,39 chainNetMm10,31 chainNetMm10,38 chainNetMm39,32 chainNetMm39,39 chainNetMonDom4,32 chainNetMonDom4,39 chainNetOryCun2,32 chainNetOryCun2,39 chainNetRn6,33 chainNetRn6,40 chainOryCun2,29 chainOryCun2,36 chainRn6,30 chainRn6,37 netGalGal3,30 netGalGal3,37 netGalVar1,33 netGalVar1,40 netHg19,29 netHg19,36 netMm10,29 netMm10,36 netMm39,29 netMm39,36 netMonDom4,29 netMonDom4,36 netOryCun2,29 netOryCun2,36 netRn6,30 netRn6,37 refSeqComposite,35 refSeqComposite,163 refSeqComposite,187 refSeqComposite,1399 uniprot,59 uniprot,72 uniprot,520 uniprot,548 subtracts refSeqComposite,179 successful est,593 intronEst,674 such chainGalGal3,863 chainGalVar1,878 chainHg19,860 chainMm10,860 chainMm39,860 chainMonDom4,860 chainNetGalGal3,866 chainNetGalVar1,881 chainNetHg19,863 chainNetMm10,862 chainNetMm39,863 chainNetMonDom4,863 chainNetOryCun2,863 chainNetRn6,866 chainOryCun2,860 chainRn6,863 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netGalGal3,863 netGalVar1,878 netHg19,860 netMm10,860 netMm39,860 netMonDom4,860 netOryCun2,860 netRn6,863 refSeqComposite,413 uniprot,306 suffix transMapEnsemblV5,401 transMapEstV5,370 transMapRefSeqV5,370 transMapRnaV5,370 transMapV5,476 uniprot,1255 suggestions refGene,58 refSeqComposite,117 suitable uniprot,1868 supercontig gap,102 gap,128 supercontigs gold,38 suppl augustusGene,336 nscanGene,355 supported gap,60 sure refSeqComposite,1100 uniprot,1407 swiss-prot uniprot,2025 swissprot unipAliSwissprot,1 unipAliSwissprot,6 uniprot,3 uniprot,24 uniprot,31 uniprot,76 uniprot,109 uniprot,116 uniprot,127 uniprot,414 uniprot,454 uniprot,495 uniprot,623 uniprot,703 uniprot,1373 symp chainGalGal3,1045 chainGalVar1,1060 chainHg19,1042 chainMm10,1042 chainMm39,1042 chainMonDom4,1042 chainNetGalGal3,1048 chainNetGalVar1,1063 chainNetHg19,1045 chainNetMm10,1044 chainNetMm39,1045 chainNetMonDom4,1045 chainNetOryCun2,1045 chainNetRn6,1048 chainOryCun2,1042 chainRn6,1045 netGalGal3,1045 netGalVar1,1060 netHg19,1042 netMm10,1042 netMm39,1042 netMonDom4,1042 netOryCun2,1042 netRn6,1045 syn chainGalGal3,526 chainGalVar1,537 chainHg19,523 chainMm10,523 chainMm39,523 chainMonDom4,523 chainNetGalGal3,529 chainNetGalVar1,540 chainNetHg19,526 chainNetMm10,525 chainNetMm39,526 chainNetMonDom4,526 chainNetOryCun2,526 chainNetRn6,529 chainOryCun2,523 chainRn6,526 netGalGal3,526 netGalVar1,537 netHg19,523 netMm10,523 netMm39,523 netMonDom4,523 netOryCun2,523 netRn6,526 transMapEnsemblV5,255 transMapEstV5,224 transMapRefSeqV5,224 transMapRnaV5,224 transMapV5,330 syntenic chainGalGal3,289 chainGalGal3,870 chainGalVar1,299 chainGalVar1,885 chainHg19,287 chainHg19,867 chainMm10,287 chainMm10,867 chainMm39,287 chainMm39,867 chainMonDom4,287 chainMonDom4,867 chainNetGalGal3,292 chainNetGalGal3,873 chainNetGalVar1,302 chainNetGalVar1,888 chainNetHg19,290 chainNetHg19,870 chainNetMm10,289 chainNetMm10,869 chainNetMm39,290 chainNetMm39,870 chainNetMonDom4,290 chainNetMonDom4,870 chainNetOryCun2,290 chainNetOryCun2,870 chainNetRn6,292 chainNetRn6,873 chainOryCun2,287 chainOryCun2,867 chainRn6,289 chainRn6,870 netGalGal3,289 netGalGal3,870 netGalVar1,299 netGalVar1,885 netHg19,287 netHg19,867 netMm10,287 netMm10,867 netMm39,287 netMm39,867 netMonDom4,287 netMonDom4,867 netOryCun2,287 netOryCun2,867 netRn6,289 netRn6,870 transMapEnsemblV5,237 transMapEnsemblV5,517 transMapEstV5,206 transMapEstV5,486 transMapRefSeqV5,206 transMapRefSeqV5,486 transMapRnaV5,206 transMapRnaV5,486 transMapV5,312 transMapV5,592 syntenically augustusGene,297 transMapEnsemblV5,76 transMapEnsemblV5,768 transMapEstV5,45 transMapEstV5,737 transMapRefSeqV5,45 transMapRefSeqV5,737 transMapRnaV5,45 transMapRnaV5,737 transMapV5,44 transMapV5,843 synteny chainGalGal3,33 chainGalVar1,36 chainHg19,32 chainMm10,32 chainMm39,32 chainMonDom4,32 chainNetGalGal3,36 chainNetGalVar1,39 chainNetHg19,35 chainNetMm10,34 chainNetMm39,35 chainNetMonDom4,35 chainNetOryCun2,35 chainNetRn6,36 chainOryCun2,32 chainRn6,33 netGalGal3,33 netGalVar1,36 netHg19,32 netMm10,32 netMm39,32 netMonDom4,32 netOryCun2,32 netRn6,33 transMapEnsemblV5,276 transMapEstV5,245 transMapRefSeqV5,245 transMapRnaV5,245 transMapV5,351 synteny-filtered transMapV5,83 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainGalGal3,81 chainGalVar1,85 chainHg19,79 chainMm10,79 chainMm39,79 chainMonDom4,79 chainNetGalGal3,84 chainNetGalVar1,88 chainNetHg19,82 chainNetMm10,81 chainNetMm39,82 chainNetMonDom4,82 chainNetOryCun2,82 chainNetRn6,84 chainOryCun2,79 chainRn6,81 netGalGal3,81 netGalVar1,85 netHg19,79 netMm10,79 netMm39,79 netMonDom4,79 netOryCun2,79 netRn6,81 refSeqComposite,1468 refSeqComposite,1527 transMapEnsemblV5,633 transMapEstV5,602 transMapRefSeqV5,602 transMapRnaV5,602 transMapV5,708 uniprot,1353 uniprot,1784 systems chainGalGal3,91 chainGalVar1,95 chainHg19,89 chainMm10,89 chainMm39,89 chainMonDom4,89 chainNetGalGal3,94 chainNetGalVar1,98 chainNetHg19,92 chainNetMm10,91 chainNetMm39,92 chainNetMonDom4,92 chainNetOryCun2,92 chainNetRn6,94 chainOryCun2,89 chainRn6,91 netGalGal3,91 netGalVar1,95 netHg19,89 netMm10,89 netMm39,89 netMonDom4,89 netOryCun2,89 netRn6,91 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 ensGene,169 ensGene,181 ensGene,187 refGene,405 refSeqComposite,1795 xenoRefGene,365 t-100-25-9091 chainGalGal3,682 chainMonDom4,679 chainNetGalGal3,685 chainNetMonDom4,682 netGalGal3,682 netMonDom4,679 t-123-31-11491 chainGalVar1,697 chainHg19,679 chainMm10,679 chainMm39,679 chainNetGalVar1,700 chainNetHg19,682 chainNetMm10,681 chainNetMm39,682 chainNetOryCun2,682 chainNetRn6,685 chainOryCun2,679 chainRn6,682 netGalVar1,697 netHg19,679 netMm10,679 netMm39,679 netOryCun2,679 netRn6,682 table augustusGene,225 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 ensGene,66 est,222 est,225 est,244 intronEst,303 intronEst,306 intronEst,325 mrna,168 mrna,171 mrna,190 refSeqComposite,1180 refSeqComposite,1313 refSeqComposite,1358 refSeqComposite,1575 transMapEnsemblV5,532 transMapEstV5,501 transMapRefSeqV5,501 transMapRnaV5,501 transMapV5,607 uniprot,1720 windowmaskerSdust,85 xenoMrna,242 xenoMrna,245 xenoMrna,264 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 refSeqComposite,82 refSeqComposite,1319 refSeqComposite,1404 refSeqComposite,1433 uniprot,1301 tablesize chainGalGal3,712 chainGalVar1,727 chainHg19,709 chainMm10,709 chainMm39,709 chainMonDom4,709 chainNetGalGal3,715 chainNetGalVar1,730 chainNetHg19,712 chainNetMm10,711 chainNetMm39,712 chainNetMonDom4,712 chainNetOryCun2,712 chainNetRn6,715 chainOryCun2,709 chainRn6,712 netGalGal3,712 netGalVar1,727 netHg19,709 netMm10,709 netMm39,709 netMonDom4,709 netOryCun2,709 netRn6,712 tags est,22 intronEst,23 tail est,504 intronEst,585 taken est,475 gap,151 intronEst,556 refGene,28 refSeqComposite,25 xenoRefGene,26 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 transMapEnsemblV5,509 transMapEstV5,478 transMapRefSeqV5,478 transMapRnaV5,478 transMapV5,584 target nscanGene,45 target-informant nscanGene,65 targeted transMapEnsemblV5,737 transMapEstV5,706 transMapRefSeqV5,706 transMapRnaV5,706 transMapV5,812 targeting refSeqComposite,584 task est,164 intronEst,245 mrna,110 xenoMrna,184 tatusova refGene,404 refSeqComposite,1794 xenoRefGene,364 tblastn blastHg18KG,8 blastHg18KG,17 blastHg18KG,79 blastHg18KG,140 uniprot,1476 techniques est,569 intronEst,650 temperature augustusGene,141 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 tenney nscanGene,252 term est,171 intronEst,252 mrna,117 xenoMrna,191 terminal rmsk,167 terminology refSeqComposite,1075 terms est,215 est,261 intronEst,296 intronEst,342 mrna,161 mrna,207 xenoMrna,235 xenoMrna,281 text est,178 est,218 est,258 intronEst,259 intronEst,299 intronEst,339 mrna,124 mrna,164 mrna,204 uniprot,1763 xenoMrna,198 xenoMrna,238 xenoMrna,278 tgap chainGalGal3,740 chainGalVar1,755 chainHg19,737 chainMm10,737 chainMm39,737 chainMonDom4,737 chainNetGalGal3,743 chainNetGalVar1,758 chainNetHg19,740 chainNetMm10,739 chainNetMm39,740 chainNetMonDom4,740 chainNetOryCun2,740 chainNetRn6,743 chainOryCun2,737 chainRn6,740 netGalGal3,740 netGalVar1,755 netHg19,737 netMm10,737 netMm39,737 netMonDom4,737 netOryCun2,737 netRn6,740 th transMapEnsemblV5,796 transMapEstV5,765 transMapRefSeqV5,765 transMapRnaV5,765 transMapV5,871 than blastHg18KG,108 chainGalGal3,86 chainGalGal3,515 chainGalVar1,90 chainGalVar1,526 chainHg19,84 chainHg19,512 chainMm10,84 chainMm10,512 chainMm39,84 chainMm39,512 chainMonDom4,84 chainMonDom4,512 chainNetGalGal3,89 chainNetGalGal3,518 chainNetGalVar1,93 chainNetGalVar1,529 chainNetHg19,87 chainNetHg19,515 chainNetMm10,86 chainNetMm10,514 chainNetMm39,87 chainNetMm39,515 chainNetMonDom4,87 chainNetMonDom4,515 chainNetOryCun2,87 chainNetOryCun2,515 chainNetRn6,89 chainNetRn6,518 chainOryCun2,84 chainOryCun2,512 chainRn6,86 chainRn6,515 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 est,283 est,576 intronEst,364 intronEst,657 mrna,229 nestedRepeats,213 nestedRepeats,271 netGalGal3,86 netGalGal3,515 netGalVar1,90 netGalVar1,526 netHg19,84 netHg19,512 netMm10,84 netMm10,512 netMm39,84 netMm39,512 netMonDom4,84 netMonDom4,512 netOryCun2,84 netOryCun2,512 netRn6,86 netRn6,515 nscanGene,160 refGene,274 refSeqComposite,1245 tRNAs,92 transMapEnsemblV5,225 transMapEnsemblV5,376 transMapEstV5,194 transMapEstV5,345 transMapRefSeqV5,194 transMapRefSeqV5,345 transMapRnaV5,194 transMapRnaV5,345 transMapV5,108 transMapV5,149 transMapV5,300 transMapV5,451 xenoMrna,28 xenoMrna,303 xenoRefGene,23 xenoRefGene,235 thank ensGene,150 thanks augustusGene,248 genscan,170 nestedRepeats,303 nscanGene,226 nscanGene,244 rmsk,326 uniprot,1974 that HLTOGAannotvHg38v1,28 HLTOGAannotvHg38v1,77 HLTOGAannotvHg38v1,284 blastHg18KG,65 blastHg18KG,118 chainGalGal3,21 chainGalGal3,46 chainGalGal3,82 chainGalGal3,143 chainGalGal3,168 chainGalGal3,374 chainGalGal3,401 chainGalGal3,423 chainGalGal3,575 chainGalGal3,833 chainGalGal3,844 chainGalVar1,24 chainGalVar1,49 chainGalVar1,86 chainGalVar1,149 chainGalVar1,176 chainGalVar1,385 chainGalVar1,412 chainGalVar1,434 chainGalVar1,586 chainGalVar1,848 chainGalVar1,859 chainHg19,20 chainHg19,45 chainHg19,80 chainHg19,141 chainHg19,166 chainHg19,371 chainHg19,398 chainHg19,420 chainHg19,572 chainHg19,830 chainHg19,841 chainMm10,20 chainMm10,45 chainMm10,80 chainMm10,141 chainMm10,166 chainMm10,371 chainMm10,398 chainMm10,420 chainMm10,572 chainMm10,830 chainMm10,841 chainMm39,20 chainMm39,45 chainMm39,80 chainMm39,141 chainMm39,166 chainMm39,371 chainMm39,398 chainMm39,420 chainMm39,572 chainMm39,830 chainMm39,841 chainMonDom4,20 chainMonDom4,45 chainMonDom4,80 chainMonDom4,141 chainMonDom4,166 chainMonDom4,371 chainMonDom4,398 chainMonDom4,420 chainMonDom4,572 chainMonDom4,830 chainMonDom4,841 chainNetGalGal3,24 chainNetGalGal3,49 chainNetGalGal3,85 chainNetGalGal3,146 chainNetGalGal3,171 chainNetGalGal3,377 chainNetGalGal3,404 chainNetGalGal3,426 chainNetGalGal3,578 chainNetGalGal3,836 chainNetGalGal3,847 chainNetGalVar1,27 chainNetGalVar1,52 chainNetGalVar1,89 chainNetGalVar1,152 chainNetGalVar1,179 chainNetGalVar1,388 chainNetGalVar1,415 chainNetGalVar1,437 chainNetGalVar1,589 chainNetGalVar1,851 chainNetGalVar1,862 chainNetHg19,23 chainNetHg19,48 chainNetHg19,83 chainNetHg19,144 chainNetHg19,169 chainNetHg19,374 chainNetHg19,401 chainNetHg19,423 chainNetHg19,575 chainNetHg19,833 chainNetHg19,844 chainNetMm10,22 chainNetMm10,47 chainNetMm10,82 chainNetMm10,143 chainNetMm10,168 chainNetMm10,373 chainNetMm10,400 chainNetMm10,422 chainNetMm10,574 chainNetMm10,832 chainNetMm10,843 chainNetMm39,23 chainNetMm39,48 chainNetMm39,83 chainNetMm39,144 chainNetMm39,169 chainNetMm39,374 chainNetMm39,401 chainNetMm39,423 chainNetMm39,575 chainNetMm39,833 chainNetMm39,844 chainNetMonDom4,23 chainNetMonDom4,48 chainNetMonDom4,83 chainNetMonDom4,144 chainNetMonDom4,169 chainNetMonDom4,374 chainNetMonDom4,401 chainNetMonDom4,423 chainNetMonDom4,575 chainNetMonDom4,833 chainNetMonDom4,844 chainNetOryCun2,23 chainNetOryCun2,48 chainNetOryCun2,83 chainNetOryCun2,144 chainNetOryCun2,169 chainNetOryCun2,374 chainNetOryCun2,401 chainNetOryCun2,423 chainNetOryCun2,575 chainNetOryCun2,833 chainNetOryCun2,844 chainNetRn6,24 chainNetRn6,49 chainNetRn6,85 chainNetRn6,146 chainNetRn6,171 chainNetRn6,377 chainNetRn6,404 chainNetRn6,426 chainNetRn6,578 chainNetRn6,836 chainNetRn6,847 chainOryCun2,20 chainOryCun2,45 chainOryCun2,80 chainOryCun2,141 chainOryCun2,166 chainOryCun2,371 chainOryCun2,398 chainOryCun2,420 chainOryCun2,572 chainOryCun2,830 chainOryCun2,841 chainRn6,21 chainRn6,46 chainRn6,82 chainRn6,143 chainRn6,168 chainRn6,374 chainRn6,401 chainRn6,423 chainRn6,575 chainRn6,833 chainRn6,844 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 est,39 est,66 est,120 est,227 est,251 est,299 est,314 est,331 est,355 est,373 est,390 est,405 est,659 est,680 genscan,141 gold,65 intronEst,6 intronEst,30 intronEst,50 intronEst,201 intronEst,308 intronEst,332 intronEst,380 intronEst,395 intronEst,412 intronEst,436 intronEst,454 intronEst,471 intronEst,486 intronEst,740 intronEst,761 microsat,15 mrna,47 mrna,66 mrna,173 mrna,197 mrna,245 mrna,260 mrna,277 mrna,301 mrna,319 mrna,336 nestedRepeats,265 nestedRepeats,273 netGalGal3,21 netGalGal3,46 netGalGal3,82 netGalGal3,143 netGalGal3,168 netGalGal3,374 netGalGal3,401 netGalGal3,423 netGalGal3,575 netGalGal3,833 netGalGal3,844 netGalVar1,24 netGalVar1,49 netGalVar1,86 netGalVar1,149 netGalVar1,176 netGalVar1,385 netGalVar1,412 netGalVar1,434 netGalVar1,586 netGalVar1,848 netGalVar1,859 netHg19,20 netHg19,45 netHg19,80 netHg19,141 netHg19,166 netHg19,371 netHg19,398 netHg19,420 netHg19,572 netHg19,830 netHg19,841 netMm10,20 netMm10,45 netMm10,80 netMm10,141 netMm10,166 netMm10,371 netMm10,398 netMm10,420 netMm10,572 netMm10,830 netMm10,841 netMm39,20 netMm39,45 netMm39,80 netMm39,141 netMm39,166 netMm39,371 netMm39,398 netMm39,420 netMm39,572 netMm39,830 netMm39,841 netMonDom4,20 netMonDom4,45 netMonDom4,80 netMonDom4,141 netMonDom4,166 netMonDom4,371 netMonDom4,398 netMonDom4,420 netMonDom4,572 netMonDom4,830 netMonDom4,841 netOryCun2,20 netOryCun2,45 netOryCun2,80 netOryCun2,141 netOryCun2,166 netOryCun2,371 netOryCun2,398 netOryCun2,420 netOryCun2,572 netOryCun2,830 netOryCun2,841 netRn6,21 netRn6,46 netRn6,82 netRn6,143 netRn6,168 netRn6,374 netRn6,401 netRn6,423 netRn6,575 netRn6,833 netRn6,844 refGene,187 refSeqComposite,151 refSeqComposite,171 refSeqComposite,216 refSeqComposite,346 refSeqComposite,389 refSeqComposite,824 refSeqComposite,934 refSeqComposite,1025 refSeqComposite,1033 refSeqComposite,1058 refSeqComposite,1101 refSeqComposite,1622 rmsk,42 rmsk,259 tRNAs,29 tRNAs,79 tRNAs,186 tRNAs,284 tRNAs,296 transMapEnsemblV5,118 transMapEnsemblV5,194 transMapEnsemblV5,500 transMapEstV5,87 transMapEstV5,163 transMapEstV5,469 transMapRefSeqV5,87 transMapRefSeqV5,163 transMapRefSeqV5,469 transMapRnaV5,87 transMapRnaV5,163 transMapRnaV5,469 transMapV5,193 transMapV5,269 transMapV5,575 uniprot,167 uniprot,301 uniprot,696 uniprot,734 uniprot,745 uniprot,999 uniprot,1012 uniprot,1169 uniprot,1408 uniprot,1602 uniprot,1624 uniprot,1738 uniprot,1866 xenoMrna,51 xenoMrna,140 xenoMrna,247 xenoMrna,271 xenoMrna,319 xenoMrna,334 xenoMrna,351 xenoMrna,375 xenoMrna,393 xenoMrna,410 xenoRefGene,148 the HLTOGAannotvHg38v1,67 HLTOGAannotvHg38v1,108 HLTOGAannotvHg38v1,120 HLTOGAannotvHg38v1,125 HLTOGAannotvHg38v1,147 HLTOGAannotvHg38v1,169 HLTOGAannotvHg38v1,174 HLTOGAannotvHg38v1,177 HLTOGAannotvHg38v1,181 HLTOGAannotvHg38v1,195 HLTOGAannotvHg38v1,202 HLTOGAannotvHg38v1,216 HLTOGAannotvHg38v1,221 HLTOGAannotvHg38v1,224 HLTOGAannotvHg38v1,228 HLTOGAannotvHg38v1,243 HLTOGAannotvHg38v1,247 HLTOGAannotvHg38v1,257 HLTOGAannotvHg38v1,285 HLTOGAannotvHg38v1,302 HLTOGAannotvHg38v1,307 HLTOGAannotvHg38v1,320 HLTOGAannotvHg38v1,325 augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 blastHg18KG,20 blastHg18KG,23 blastHg18KG,30 blastHg18KG,37 blastHg18KG,41 blastHg18KG,49 blastHg18KG,53 blastHg18KG,61 blastHg18KG,73 blastHg18KG,78 blastHg18KG,82 blastHg18KG,100 blastHg18KG,111 blastHg18KG,123 blastHg18KG,131 blastHg18KG,144 blastHg18KG,185 chainGalGal3,19 chainGalGal3,38 chainGalGal3,60 chainGalGal3,73 chainGalGal3,121 chainGalGal3,134 chainGalGal3,151 chainGalGal3,158 chainGalGal3,205 chainGalGal3,209 chainGalGal3,235 chainGalGal3,245 chainGalGal3,250 chainGalGal3,258 chainGalGal3,266 chainGalGal3,270 chainGalGal3,280 chainGalGal3,298 chainGalGal3,307 chainGalGal3,322 chainGalGal3,337 chainGalGal3,343 chainGalGal3,346 chainGalGal3,361 chainGalGal3,367 chainGalGal3,371 chainGalGal3,391 chainGalGal3,397 chainGalGal3,411 chainGalGal3,429 chainGalGal3,446 chainGalGal3,449 chainGalGal3,454 chainGalGal3,467 chainGalGal3,480 chainGalGal3,482 chainGalGal3,489 chainGalGal3,492 chainGalGal3,499 chainGalGal3,505 chainGalGal3,518 chainGalGal3,529 chainGalGal3,533 chainGalGal3,536 chainGalGal3,544 chainGalGal3,548 chainGalGal3,554 chainGalGal3,565 chainGalGal3,568 chainGalGal3,580 chainGalGal3,588 chainGalGal3,590 chainGalGal3,598 chainGalGal3,604 chainGalGal3,613 chainGalGal3,616 chainGalGal3,647 chainGalGal3,652 chainGalGal3,661 chainGalGal3,665 chainGalGal3,672 chainGalGal3,695 chainGalGal3,703 chainGalGal3,773 chainGalGal3,777 chainGalGal3,785 chainGalGal3,789 chainGalGal3,793 chainGalGal3,801 chainGalGal3,846 chainGalGal3,856 chainGalGal3,875 chainGalGal3,878 chainGalGal3,890 chainGalGal3,914 chainGalGal3,956 chainGalGal3,962 chainGalGal3,980 chainGalGal3,987 chainGalGal3,999 chainGalGal3,1008 chainGalGal3,1029 chainGalGal3,1069 chainGalVar1,22 chainGalVar1,41 chainGalVar1,63 chainGalVar1,77 chainGalVar1,127 chainGalVar1,140 chainGalVar1,157 chainGalVar1,166 chainGalVar1,213 chainGalVar1,217 chainGalVar1,243 chainGalVar1,253 chainGalVar1,258 chainGalVar1,266 chainGalVar1,274 chainGalVar1,278 chainGalVar1,290 chainGalVar1,308 chainGalVar1,319 chainGalVar1,333 chainGalVar1,348 chainGalVar1,354 chainGalVar1,357 chainGalVar1,372 chainGalVar1,378 chainGalVar1,382 chainGalVar1,402 chainGalVar1,408 chainGalVar1,422 chainGalVar1,440 chainGalVar1,457 chainGalVar1,460 chainGalVar1,465 chainGalVar1,478 chainGalVar1,491 chainGalVar1,493 chainGalVar1,500 chainGalVar1,503 chainGalVar1,510 chainGalVar1,516 chainGalVar1,529 chainGalVar1,540 chainGalVar1,544 chainGalVar1,547 chainGalVar1,555 chainGalVar1,559 chainGalVar1,565 chainGalVar1,576 chainGalVar1,579 chainGalVar1,591 chainGalVar1,601 chainGalVar1,603 chainGalVar1,611 chainGalVar1,617 chainGalVar1,626 chainGalVar1,629 chainGalVar1,662 chainGalVar1,667 chainGalVar1,676 chainGalVar1,680 chainGalVar1,687 chainGalVar1,710 chainGalVar1,718 chainGalVar1,788 chainGalVar1,792 chainGalVar1,800 chainGalVar1,804 chainGalVar1,808 chainGalVar1,816 chainGalVar1,861 chainGalVar1,871 chainGalVar1,890 chainGalVar1,893 chainGalVar1,905 chainGalVar1,929 chainGalVar1,971 chainGalVar1,977 chainGalVar1,995 chainGalVar1,1002 chainGalVar1,1014 chainGalVar1,1023 chainGalVar1,1044 chainGalVar1,1084 chainHg19,18 chainHg19,37 chainHg19,59 chainHg19,71 chainHg19,119 chainHg19,132 chainHg19,149 chainHg19,156 chainHg19,203 chainHg19,207 chainHg19,233 chainHg19,243 chainHg19,248 chainHg19,256 chainHg19,264 chainHg19,268 chainHg19,278 chainHg19,296 chainHg19,305 chainHg19,319 chainHg19,334 chainHg19,340 chainHg19,343 chainHg19,358 chainHg19,364 chainHg19,368 chainHg19,388 chainHg19,394 chainHg19,408 chainHg19,426 chainHg19,443 chainHg19,446 chainHg19,451 chainHg19,464 chainHg19,477 chainHg19,479 chainHg19,486 chainHg19,489 chainHg19,496 chainHg19,502 chainHg19,515 chainHg19,526 chainHg19,530 chainHg19,533 chainHg19,541 chainHg19,545 chainHg19,551 chainHg19,562 chainHg19,565 chainHg19,577 chainHg19,585 chainHg19,587 chainHg19,595 chainHg19,601 chainHg19,610 chainHg19,613 chainHg19,644 chainHg19,649 chainHg19,658 chainHg19,662 chainHg19,669 chainHg19,692 chainHg19,700 chainHg19,770 chainHg19,774 chainHg19,782 chainHg19,786 chainHg19,790 chainHg19,798 chainHg19,843 chainHg19,853 chainHg19,872 chainHg19,875 chainHg19,887 chainHg19,911 chainHg19,953 chainHg19,959 chainHg19,977 chainHg19,984 chainHg19,996 chainHg19,1005 chainHg19,1026 chainHg19,1066 chainMm10,18 chainMm10,37 chainMm10,59 chainMm10,71 chainMm10,119 chainMm10,132 chainMm10,149 chainMm10,156 chainMm10,203 chainMm10,207 chainMm10,233 chainMm10,243 chainMm10,248 chainMm10,256 chainMm10,264 chainMm10,268 chainMm10,278 chainMm10,296 chainMm10,305 chainMm10,319 chainMm10,334 chainMm10,340 chainMm10,343 chainMm10,358 chainMm10,364 chainMm10,368 chainMm10,388 chainMm10,394 chainMm10,408 chainMm10,426 chainMm10,443 chainMm10,446 chainMm10,451 chainMm10,464 chainMm10,477 chainMm10,479 chainMm10,486 chainMm10,489 chainMm10,496 chainMm10,502 chainMm10,515 chainMm10,526 chainMm10,530 chainMm10,533 chainMm10,541 chainMm10,545 chainMm10,551 chainMm10,562 chainMm10,565 chainMm10,577 chainMm10,585 chainMm10,587 chainMm10,595 chainMm10,601 chainMm10,610 chainMm10,613 chainMm10,644 chainMm10,649 chainMm10,658 chainMm10,662 chainMm10,669 chainMm10,692 chainMm10,700 chainMm10,770 chainMm10,774 chainMm10,782 chainMm10,786 chainMm10,790 chainMm10,798 chainMm10,843 chainMm10,853 chainMm10,872 chainMm10,875 chainMm10,887 chainMm10,911 chainMm10,953 chainMm10,959 chainMm10,977 chainMm10,984 chainMm10,996 chainMm10,1005 chainMm10,1026 chainMm10,1066 chainMm39,18 chainMm39,37 chainMm39,59 chainMm39,71 chainMm39,119 chainMm39,132 chainMm39,149 chainMm39,156 chainMm39,203 chainMm39,207 chainMm39,233 chainMm39,243 chainMm39,248 chainMm39,256 chainMm39,264 chainMm39,268 chainMm39,278 chainMm39,296 chainMm39,305 chainMm39,319 chainMm39,334 chainMm39,340 chainMm39,343 chainMm39,358 chainMm39,364 chainMm39,368 chainMm39,388 chainMm39,394 chainMm39,408 chainMm39,426 chainMm39,443 chainMm39,446 chainMm39,451 chainMm39,464 chainMm39,477 chainMm39,479 chainMm39,486 chainMm39,489 chainMm39,496 chainMm39,502 chainMm39,515 chainMm39,526 chainMm39,530 chainMm39,533 chainMm39,541 chainMm39,545 chainMm39,551 chainMm39,562 chainMm39,565 chainMm39,577 chainMm39,585 chainMm39,587 chainMm39,595 chainMm39,601 chainMm39,610 chainMm39,613 chainMm39,644 chainMm39,649 chainMm39,658 chainMm39,662 chainMm39,669 chainMm39,692 chainMm39,700 chainMm39,770 chainMm39,774 chainMm39,782 chainMm39,786 chainMm39,790 chainMm39,798 chainMm39,843 chainMm39,853 chainMm39,872 chainMm39,875 chainMm39,887 chainMm39,911 chainMm39,953 chainMm39,959 chainMm39,977 chainMm39,984 chainMm39,996 chainMm39,1005 chainMm39,1026 chainMm39,1066 chainMonDom4,18 chainMonDom4,37 chainMonDom4,59 chainMonDom4,71 chainMonDom4,119 chainMonDom4,132 chainMonDom4,149 chainMonDom4,156 chainMonDom4,203 chainMonDom4,207 chainMonDom4,233 chainMonDom4,243 chainMonDom4,248 chainMonDom4,256 chainMonDom4,264 chainMonDom4,268 chainMonDom4,278 chainMonDom4,296 chainMonDom4,305 chainMonDom4,319 chainMonDom4,334 chainMonDom4,340 chainMonDom4,343 chainMonDom4,358 chainMonDom4,364 chainMonDom4,368 chainMonDom4,388 chainMonDom4,394 chainMonDom4,408 chainMonDom4,426 chainMonDom4,443 chainMonDom4,446 chainMonDom4,451 chainMonDom4,464 chainMonDom4,477 chainMonDom4,479 chainMonDom4,486 chainMonDom4,489 chainMonDom4,496 chainMonDom4,502 chainMonDom4,515 chainMonDom4,526 chainMonDom4,530 chainMonDom4,533 chainMonDom4,541 chainMonDom4,545 chainMonDom4,551 chainMonDom4,562 chainMonDom4,565 chainMonDom4,577 chainMonDom4,585 chainMonDom4,587 chainMonDom4,595 chainMonDom4,601 chainMonDom4,610 chainMonDom4,613 chainMonDom4,644 chainMonDom4,649 chainMonDom4,658 chainMonDom4,662 chainMonDom4,669 chainMonDom4,692 chainMonDom4,700 chainMonDom4,770 chainMonDom4,774 chainMonDom4,782 chainMonDom4,786 chainMonDom4,790 chainMonDom4,798 chainMonDom4,843 chainMonDom4,853 chainMonDom4,872 chainMonDom4,875 chainMonDom4,887 chainMonDom4,911 chainMonDom4,953 chainMonDom4,959 chainMonDom4,977 chainMonDom4,984 chainMonDom4,996 chainMonDom4,1005 chainMonDom4,1026 chainMonDom4,1066 chainNetGalGal3,22 chainNetGalGal3,41 chainNetGalGal3,63 chainNetGalGal3,76 chainNetGalGal3,124 chainNetGalGal3,137 chainNetGalGal3,154 chainNetGalGal3,161 chainNetGalGal3,208 chainNetGalGal3,212 chainNetGalGal3,238 chainNetGalGal3,248 chainNetGalGal3,253 chainNetGalGal3,261 chainNetGalGal3,269 chainNetGalGal3,273 chainNetGalGal3,283 chainNetGalGal3,301 chainNetGalGal3,310 chainNetGalGal3,325 chainNetGalGal3,340 chainNetGalGal3,346 chainNetGalGal3,349 chainNetGalGal3,364 chainNetGalGal3,370 chainNetGalGal3,374 chainNetGalGal3,394 chainNetGalGal3,400 chainNetGalGal3,414 chainNetGalGal3,432 chainNetGalGal3,449 chainNetGalGal3,452 chainNetGalGal3,457 chainNetGalGal3,470 chainNetGalGal3,483 chainNetGalGal3,485 chainNetGalGal3,492 chainNetGalGal3,495 chainNetGalGal3,502 chainNetGalGal3,508 chainNetGalGal3,521 chainNetGalGal3,532 chainNetGalGal3,536 chainNetGalGal3,539 chainNetGalGal3,547 chainNetGalGal3,551 chainNetGalGal3,557 chainNetGalGal3,568 chainNetGalGal3,571 chainNetGalGal3,583 chainNetGalGal3,591 chainNetGalGal3,593 chainNetGalGal3,601 chainNetGalGal3,607 chainNetGalGal3,616 chainNetGalGal3,619 chainNetGalGal3,650 chainNetGalGal3,655 chainNetGalGal3,664 chainNetGalGal3,668 chainNetGalGal3,675 chainNetGalGal3,698 chainNetGalGal3,706 chainNetGalGal3,776 chainNetGalGal3,780 chainNetGalGal3,788 chainNetGalGal3,792 chainNetGalGal3,796 chainNetGalGal3,804 chainNetGalGal3,849 chainNetGalGal3,859 chainNetGalGal3,878 chainNetGalGal3,881 chainNetGalGal3,893 chainNetGalGal3,917 chainNetGalGal3,959 chainNetGalGal3,965 chainNetGalGal3,983 chainNetGalGal3,990 chainNetGalGal3,1002 chainNetGalGal3,1011 chainNetGalGal3,1032 chainNetGalGal3,1072 chainNetGalVar1,25 chainNetGalVar1,44 chainNetGalVar1,66 chainNetGalVar1,80 chainNetGalVar1,130 chainNetGalVar1,143 chainNetGalVar1,160 chainNetGalVar1,169 chainNetGalVar1,216 chainNetGalVar1,220 chainNetGalVar1,246 chainNetGalVar1,256 chainNetGalVar1,261 chainNetGalVar1,269 chainNetGalVar1,277 chainNetGalVar1,281 chainNetGalVar1,293 chainNetGalVar1,311 chainNetGalVar1,322 chainNetGalVar1,336 chainNetGalVar1,351 chainNetGalVar1,357 chainNetGalVar1,360 chainNetGalVar1,375 chainNetGalVar1,381 chainNetGalVar1,385 chainNetGalVar1,405 chainNetGalVar1,411 chainNetGalVar1,425 chainNetGalVar1,443 chainNetGalVar1,460 chainNetGalVar1,463 chainNetGalVar1,468 chainNetGalVar1,481 chainNetGalVar1,494 chainNetGalVar1,496 chainNetGalVar1,503 chainNetGalVar1,506 chainNetGalVar1,513 chainNetGalVar1,519 chainNetGalVar1,532 chainNetGalVar1,543 chainNetGalVar1,547 chainNetGalVar1,550 chainNetGalVar1,558 chainNetGalVar1,562 chainNetGalVar1,568 chainNetGalVar1,579 chainNetGalVar1,582 chainNetGalVar1,594 chainNetGalVar1,604 chainNetGalVar1,606 chainNetGalVar1,614 chainNetGalVar1,620 chainNetGalVar1,629 chainNetGalVar1,632 chainNetGalVar1,665 chainNetGalVar1,670 chainNetGalVar1,679 chainNetGalVar1,683 chainNetGalVar1,690 chainNetGalVar1,713 chainNetGalVar1,721 chainNetGalVar1,791 chainNetGalVar1,795 chainNetGalVar1,803 chainNetGalVar1,807 chainNetGalVar1,811 chainNetGalVar1,819 chainNetGalVar1,864 chainNetGalVar1,874 chainNetGalVar1,893 chainNetGalVar1,896 chainNetGalVar1,908 chainNetGalVar1,932 chainNetGalVar1,974 chainNetGalVar1,980 chainNetGalVar1,998 chainNetGalVar1,1005 chainNetGalVar1,1017 chainNetGalVar1,1026 chainNetGalVar1,1047 chainNetGalVar1,1087 chainNetHg19,21 chainNetHg19,40 chainNetHg19,62 chainNetHg19,74 chainNetHg19,122 chainNetHg19,135 chainNetHg19,152 chainNetHg19,159 chainNetHg19,206 chainNetHg19,210 chainNetHg19,236 chainNetHg19,246 chainNetHg19,251 chainNetHg19,259 chainNetHg19,267 chainNetHg19,271 chainNetHg19,281 chainNetHg19,299 chainNetHg19,308 chainNetHg19,322 chainNetHg19,337 chainNetHg19,343 chainNetHg19,346 chainNetHg19,361 chainNetHg19,367 chainNetHg19,371 chainNetHg19,391 chainNetHg19,397 chainNetHg19,411 chainNetHg19,429 chainNetHg19,446 chainNetHg19,449 chainNetHg19,454 chainNetHg19,467 chainNetHg19,480 chainNetHg19,482 chainNetHg19,489 chainNetHg19,492 chainNetHg19,499 chainNetHg19,505 chainNetHg19,518 chainNetHg19,529 chainNetHg19,533 chainNetHg19,536 chainNetHg19,544 chainNetHg19,548 chainNetHg19,554 chainNetHg19,565 chainNetHg19,568 chainNetHg19,580 chainNetHg19,588 chainNetHg19,590 chainNetHg19,598 chainNetHg19,604 chainNetHg19,613 chainNetHg19,616 chainNetHg19,647 chainNetHg19,652 chainNetHg19,661 chainNetHg19,665 chainNetHg19,672 chainNetHg19,695 chainNetHg19,703 chainNetHg19,773 chainNetHg19,777 chainNetHg19,785 chainNetHg19,789 chainNetHg19,793 chainNetHg19,801 chainNetHg19,846 chainNetHg19,856 chainNetHg19,875 chainNetHg19,878 chainNetHg19,890 chainNetHg19,914 chainNetHg19,956 chainNetHg19,962 chainNetHg19,980 chainNetHg19,987 chainNetHg19,999 chainNetHg19,1008 chainNetHg19,1029 chainNetHg19,1069 chainNetMm10,20 chainNetMm10,39 chainNetMm10,61 chainNetMm10,73 chainNetMm10,121 chainNetMm10,134 chainNetMm10,151 chainNetMm10,158 chainNetMm10,205 chainNetMm10,209 chainNetMm10,235 chainNetMm10,245 chainNetMm10,250 chainNetMm10,258 chainNetMm10,266 chainNetMm10,270 chainNetMm10,280 chainNetMm10,298 chainNetMm10,307 chainNetMm10,321 chainNetMm10,336 chainNetMm10,342 chainNetMm10,345 chainNetMm10,360 chainNetMm10,366 chainNetMm10,370 chainNetMm10,390 chainNetMm10,396 chainNetMm10,410 chainNetMm10,428 chainNetMm10,445 chainNetMm10,448 chainNetMm10,453 chainNetMm10,466 chainNetMm10,479 chainNetMm10,481 chainNetMm10,488 chainNetMm10,491 chainNetMm10,498 chainNetMm10,504 chainNetMm10,517 chainNetMm10,528 chainNetMm10,532 chainNetMm10,535 chainNetMm10,543 chainNetMm10,547 chainNetMm10,553 chainNetMm10,564 chainNetMm10,567 chainNetMm10,579 chainNetMm10,587 chainNetMm10,589 chainNetMm10,597 chainNetMm10,603 chainNetMm10,612 chainNetMm10,615 chainNetMm10,646 chainNetMm10,651 chainNetMm10,660 chainNetMm10,664 chainNetMm10,671 chainNetMm10,694 chainNetMm10,702 chainNetMm10,772 chainNetMm10,776 chainNetMm10,784 chainNetMm10,788 chainNetMm10,792 chainNetMm10,800 chainNetMm10,845 chainNetMm10,855 chainNetMm10,874 chainNetMm10,877 chainNetMm10,889 chainNetMm10,913 chainNetMm10,955 chainNetMm10,961 chainNetMm10,979 chainNetMm10,986 chainNetMm10,998 chainNetMm10,1007 chainNetMm10,1028 chainNetMm10,1068 chainNetMm39,21 chainNetMm39,40 chainNetMm39,62 chainNetMm39,74 chainNetMm39,122 chainNetMm39,135 chainNetMm39,152 chainNetMm39,159 chainNetMm39,206 chainNetMm39,210 chainNetMm39,236 chainNetMm39,246 chainNetMm39,251 chainNetMm39,259 chainNetMm39,267 chainNetMm39,271 chainNetMm39,281 chainNetMm39,299 chainNetMm39,308 chainNetMm39,322 chainNetMm39,337 chainNetMm39,343 chainNetMm39,346 chainNetMm39,361 chainNetMm39,367 chainNetMm39,371 chainNetMm39,391 chainNetMm39,397 chainNetMm39,411 chainNetMm39,429 chainNetMm39,446 chainNetMm39,449 chainNetMm39,454 chainNetMm39,467 chainNetMm39,480 chainNetMm39,482 chainNetMm39,489 chainNetMm39,492 chainNetMm39,499 chainNetMm39,505 chainNetMm39,518 chainNetMm39,529 chainNetMm39,533 chainNetMm39,536 chainNetMm39,544 chainNetMm39,548 chainNetMm39,554 chainNetMm39,565 chainNetMm39,568 chainNetMm39,580 chainNetMm39,588 chainNetMm39,590 chainNetMm39,598 chainNetMm39,604 chainNetMm39,613 chainNetMm39,616 chainNetMm39,647 chainNetMm39,652 chainNetMm39,661 chainNetMm39,665 chainNetMm39,672 chainNetMm39,695 chainNetMm39,703 chainNetMm39,773 chainNetMm39,777 chainNetMm39,785 chainNetMm39,789 chainNetMm39,793 chainNetMm39,801 chainNetMm39,846 chainNetMm39,856 chainNetMm39,875 chainNetMm39,878 chainNetMm39,890 chainNetMm39,914 chainNetMm39,956 chainNetMm39,962 chainNetMm39,980 chainNetMm39,987 chainNetMm39,999 chainNetMm39,1008 chainNetMm39,1029 chainNetMm39,1069 chainNetMonDom4,21 chainNetMonDom4,40 chainNetMonDom4,62 chainNetMonDom4,74 chainNetMonDom4,122 chainNetMonDom4,135 chainNetMonDom4,152 chainNetMonDom4,159 chainNetMonDom4,206 chainNetMonDom4,210 chainNetMonDom4,236 chainNetMonDom4,246 chainNetMonDom4,251 chainNetMonDom4,259 chainNetMonDom4,267 chainNetMonDom4,271 chainNetMonDom4,281 chainNetMonDom4,299 chainNetMonDom4,308 chainNetMonDom4,322 chainNetMonDom4,337 chainNetMonDom4,343 chainNetMonDom4,346 chainNetMonDom4,361 chainNetMonDom4,367 chainNetMonDom4,371 chainNetMonDom4,391 chainNetMonDom4,397 chainNetMonDom4,411 chainNetMonDom4,429 chainNetMonDom4,446 chainNetMonDom4,449 chainNetMonDom4,454 chainNetMonDom4,467 chainNetMonDom4,480 chainNetMonDom4,482 chainNetMonDom4,489 chainNetMonDom4,492 chainNetMonDom4,499 chainNetMonDom4,505 chainNetMonDom4,518 chainNetMonDom4,529 chainNetMonDom4,533 chainNetMonDom4,536 chainNetMonDom4,544 chainNetMonDom4,548 chainNetMonDom4,554 chainNetMonDom4,565 chainNetMonDom4,568 chainNetMonDom4,580 chainNetMonDom4,588 chainNetMonDom4,590 chainNetMonDom4,598 chainNetMonDom4,604 chainNetMonDom4,613 chainNetMonDom4,616 chainNetMonDom4,647 chainNetMonDom4,652 chainNetMonDom4,661 chainNetMonDom4,665 chainNetMonDom4,672 chainNetMonDom4,695 chainNetMonDom4,703 chainNetMonDom4,773 chainNetMonDom4,777 chainNetMonDom4,785 chainNetMonDom4,789 chainNetMonDom4,793 chainNetMonDom4,801 chainNetMonDom4,846 chainNetMonDom4,856 chainNetMonDom4,875 chainNetMonDom4,878 chainNetMonDom4,890 chainNetMonDom4,914 chainNetMonDom4,956 chainNetMonDom4,962 chainNetMonDom4,980 chainNetMonDom4,987 chainNetMonDom4,999 chainNetMonDom4,1008 chainNetMonDom4,1029 chainNetMonDom4,1069 chainNetOryCun2,21 chainNetOryCun2,40 chainNetOryCun2,62 chainNetOryCun2,74 chainNetOryCun2,122 chainNetOryCun2,135 chainNetOryCun2,152 chainNetOryCun2,159 chainNetOryCun2,206 chainNetOryCun2,210 chainNetOryCun2,236 chainNetOryCun2,246 chainNetOryCun2,251 chainNetOryCun2,259 chainNetOryCun2,267 chainNetOryCun2,271 chainNetOryCun2,281 chainNetOryCun2,299 chainNetOryCun2,308 chainNetOryCun2,322 chainNetOryCun2,337 chainNetOryCun2,343 chainNetOryCun2,346 chainNetOryCun2,361 chainNetOryCun2,367 chainNetOryCun2,371 chainNetOryCun2,391 chainNetOryCun2,397 chainNetOryCun2,411 chainNetOryCun2,429 chainNetOryCun2,446 chainNetOryCun2,449 chainNetOryCun2,454 chainNetOryCun2,467 chainNetOryCun2,480 chainNetOryCun2,482 chainNetOryCun2,489 chainNetOryCun2,492 chainNetOryCun2,499 chainNetOryCun2,505 chainNetOryCun2,518 chainNetOryCun2,529 chainNetOryCun2,533 chainNetOryCun2,536 chainNetOryCun2,544 chainNetOryCun2,548 chainNetOryCun2,554 chainNetOryCun2,565 chainNetOryCun2,568 chainNetOryCun2,580 chainNetOryCun2,588 chainNetOryCun2,590 chainNetOryCun2,598 chainNetOryCun2,604 chainNetOryCun2,613 chainNetOryCun2,616 chainNetOryCun2,647 chainNetOryCun2,652 chainNetOryCun2,661 chainNetOryCun2,665 chainNetOryCun2,672 chainNetOryCun2,695 chainNetOryCun2,703 chainNetOryCun2,773 chainNetOryCun2,777 chainNetOryCun2,785 chainNetOryCun2,789 chainNetOryCun2,793 chainNetOryCun2,801 chainNetOryCun2,846 chainNetOryCun2,856 chainNetOryCun2,875 chainNetOryCun2,878 chainNetOryCun2,890 chainNetOryCun2,914 chainNetOryCun2,956 chainNetOryCun2,962 chainNetOryCun2,980 chainNetOryCun2,987 chainNetOryCun2,999 chainNetOryCun2,1008 chainNetOryCun2,1029 chainNetOryCun2,1069 chainNetRn6,22 chainNetRn6,41 chainNetRn6,63 chainNetRn6,76 chainNetRn6,124 chainNetRn6,137 chainNetRn6,154 chainNetRn6,161 chainNetRn6,208 chainNetRn6,212 chainNetRn6,238 chainNetRn6,248 chainNetRn6,253 chainNetRn6,261 chainNetRn6,269 chainNetRn6,273 chainNetRn6,283 chainNetRn6,301 chainNetRn6,310 chainNetRn6,325 chainNetRn6,340 chainNetRn6,346 chainNetRn6,349 chainNetRn6,364 chainNetRn6,370 chainNetRn6,374 chainNetRn6,394 chainNetRn6,400 chainNetRn6,414 chainNetRn6,432 chainNetRn6,449 chainNetRn6,452 chainNetRn6,457 chainNetRn6,470 chainNetRn6,483 chainNetRn6,485 chainNetRn6,492 chainNetRn6,495 chainNetRn6,502 chainNetRn6,508 chainNetRn6,521 chainNetRn6,532 chainNetRn6,536 chainNetRn6,539 chainNetRn6,547 chainNetRn6,551 chainNetRn6,557 chainNetRn6,568 chainNetRn6,571 chainNetRn6,583 chainNetRn6,591 chainNetRn6,593 chainNetRn6,601 chainNetRn6,607 chainNetRn6,616 chainNetRn6,619 chainNetRn6,650 chainNetRn6,655 chainNetRn6,664 chainNetRn6,668 chainNetRn6,675 chainNetRn6,698 chainNetRn6,706 chainNetRn6,776 chainNetRn6,780 chainNetRn6,788 chainNetRn6,792 chainNetRn6,796 chainNetRn6,804 chainNetRn6,849 chainNetRn6,859 chainNetRn6,878 chainNetRn6,881 chainNetRn6,893 chainNetRn6,917 chainNetRn6,959 chainNetRn6,965 chainNetRn6,983 chainNetRn6,990 chainNetRn6,1002 chainNetRn6,1011 chainNetRn6,1032 chainNetRn6,1072 chainOryCun2,18 chainOryCun2,37 chainOryCun2,59 chainOryCun2,71 chainOryCun2,119 chainOryCun2,132 chainOryCun2,149 chainOryCun2,156 chainOryCun2,203 chainOryCun2,207 chainOryCun2,233 chainOryCun2,243 chainOryCun2,248 chainOryCun2,256 chainOryCun2,264 chainOryCun2,268 chainOryCun2,278 chainOryCun2,296 chainOryCun2,305 chainOryCun2,319 chainOryCun2,334 chainOryCun2,340 chainOryCun2,343 chainOryCun2,358 chainOryCun2,364 chainOryCun2,368 chainOryCun2,388 chainOryCun2,394 chainOryCun2,408 chainOryCun2,426 chainOryCun2,443 chainOryCun2,446 chainOryCun2,451 chainOryCun2,464 chainOryCun2,477 chainOryCun2,479 chainOryCun2,486 chainOryCun2,489 chainOryCun2,496 chainOryCun2,502 chainOryCun2,515 chainOryCun2,526 chainOryCun2,530 chainOryCun2,533 chainOryCun2,541 chainOryCun2,545 chainOryCun2,551 chainOryCun2,562 chainOryCun2,565 chainOryCun2,577 chainOryCun2,585 chainOryCun2,587 chainOryCun2,595 chainOryCun2,601 chainOryCun2,610 chainOryCun2,613 chainOryCun2,644 chainOryCun2,649 chainOryCun2,658 chainOryCun2,662 chainOryCun2,669 chainOryCun2,692 chainOryCun2,700 chainOryCun2,770 chainOryCun2,774 chainOryCun2,782 chainOryCun2,786 chainOryCun2,790 chainOryCun2,798 chainOryCun2,843 chainOryCun2,853 chainOryCun2,872 chainOryCun2,875 chainOryCun2,887 chainOryCun2,911 chainOryCun2,953 chainOryCun2,959 chainOryCun2,977 chainOryCun2,984 chainOryCun2,996 chainOryCun2,1005 chainOryCun2,1026 chainOryCun2,1066 chainRn6,19 chainRn6,38 chainRn6,60 chainRn6,73 chainRn6,121 chainRn6,134 chainRn6,151 chainRn6,158 chainRn6,205 chainRn6,209 chainRn6,235 chainRn6,245 chainRn6,250 chainRn6,258 chainRn6,266 chainRn6,270 chainRn6,280 chainRn6,298 chainRn6,307 chainRn6,322 chainRn6,337 chainRn6,343 chainRn6,346 chainRn6,361 chainRn6,367 chainRn6,371 chainRn6,391 chainRn6,397 chainRn6,411 chainRn6,429 chainRn6,446 chainRn6,449 chainRn6,454 chainRn6,467 chainRn6,480 chainRn6,482 chainRn6,489 chainRn6,492 chainRn6,499 chainRn6,505 chainRn6,518 chainRn6,529 chainRn6,533 chainRn6,536 chainRn6,544 chainRn6,548 chainRn6,554 chainRn6,565 chainRn6,568 chainRn6,580 chainRn6,588 chainRn6,590 chainRn6,598 chainRn6,604 chainRn6,613 chainRn6,616 chainRn6,647 chainRn6,652 chainRn6,661 chainRn6,665 chainRn6,672 chainRn6,695 chainRn6,703 chainRn6,773 chainRn6,777 chainRn6,785 chainRn6,789 chainRn6,793 chainRn6,801 chainRn6,846 chainRn6,856 chainRn6,875 chainRn6,878 chainRn6,890 chainRn6,914 chainRn6,956 chainRn6,962 chainRn6,980 chainRn6,987 chainRn6,999 chainRn6,1008 chainRn6,1029 chainRn6,1069 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ensGene,21 ensGene,34 ensGene,51 ensGene,65 ensGene,69 ensGene,75 ensGene,101 ensGene,107 ensGene,190 est,27 est,53 est,64 est,76 est,80 est,83 est,86 est,89 est,98 est,103 est,111 est,126 est,130 est,140 est,152 est,162 est,167 est,177 est,182 est,189 est,200 est,203 est,206 est,211 est,221 est,224 est,230 est,240 est,247 est,256 est,277 est,287 est,319 est,326 est,340 est,349 est,357 est,366 est,375 est,392 est,399 est,408 est,419 est,440 est,463 est,477 est,491 est,502 est,508 est,518 est,522 est,533 est,537 est,544 est,553 est,557 est,567 est,587 est,613 est,619 est,654 est,660 est,692 est,695 est,711 est,720 est,738 est,804 gap,13 gap,21 gap,32 gap,45 gap,51 gap,57 gap,77 gap,81 gap,86 gap,95 gap,112 gap,138 gc5Base,12 gc5Base,17 gc5Base,53 gc5Base,57 gc5Base,68 gc5Base,72 genscan,16 genscan,23 genscan,38 genscan,53 genscan,68 genscan,75 genscan,80 genscan,91 genscan,115 genscan,135 genscan,139 genscan,151 genscan,155 genscan,176 gold,12 gold,16 gold,40 gold,63 gold,68 gold,77 gold,94 gold,99 gold,105 gold,119 gold,124 intronEst,28 intronEst,38 intronEst,73 intronEst,96 intronEst,101 intronEst,108 intronEst,125 intronEst,137 intronEst,157 intronEst,161 intronEst,164 intronEst,167 intronEst,170 intronEst,179 intronEst,184 intronEst,192 intronEst,207 intronEst,211 intronEst,221 intronEst,233 intronEst,243 intronEst,248 intronEst,258 intronEst,263 intronEst,270 intronEst,281 intronEst,284 intronEst,287 intronEst,292 intronEst,302 intronEst,305 intronEst,311 intronEst,321 intronEst,328 intronEst,337 intronEst,358 intronEst,368 intronEst,400 intronEst,407 intronEst,421 intronEst,430 intronEst,438 intronEst,447 intronEst,456 intronEst,473 intronEst,480 intronEst,489 intronEst,500 intronEst,521 intronEst,544 intronEst,558 intronEst,572 intronEst,583 intronEst,589 intronEst,599 intronEst,603 intronEst,614 intronEst,618 intronEst,625 intronEst,634 intronEst,638 intronEst,648 intronEst,668 intronEst,694 intronEst,700 intronEst,735 intronEst,741 intronEst,773 intronEst,776 intronEst,792 intronEst,801 intronEst,822 intronEst,888 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,13 mrna,25 mrna,34 mrna,45 mrna,57 mrna,72 mrna,76 mrna,86 mrna,98 mrna,108 mrna,113 mrna,123 mrna,128 mrna,135 mrna,146 mrna,149 mrna,152 mrna,157 mrna,167 mrna,170 mrna,176 mrna,186 mrna,193 mrna,202 mrna,223 mrna,233 mrna,265 mrna,272 mrna,286 mrna,295 mrna,303 mrna,312 mrna,321 mrna,338 mrna,345 mrna,356 mrna,379 mrna,394 mrna,397 mrna,408 mrna,411 mrna,427 mrna,436 mrna,442 mrna,455 mrna,521 ncbiRefSeqGenomicDiff,9 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netGalGal3,19 netGalGal3,38 netGalGal3,60 netGalGal3,73 netGalGal3,121 netGalGal3,134 netGalGal3,151 netGalGal3,158 netGalGal3,205 netGalGal3,209 netGalGal3,235 netGalGal3,245 netGalGal3,250 netGalGal3,258 netGalGal3,266 netGalGal3,270 netGalGal3,280 netGalGal3,298 netGalGal3,307 netGalGal3,322 netGalGal3,337 netGalGal3,343 netGalGal3,346 netGalGal3,361 netGalGal3,367 netGalGal3,371 netGalGal3,391 netGalGal3,397 netGalGal3,411 netGalGal3,429 netGalGal3,446 netGalGal3,449 netGalGal3,454 netGalGal3,467 netGalGal3,480 netGalGal3,482 netGalGal3,489 netGalGal3,492 netGalGal3,499 netGalGal3,505 netGalGal3,518 netGalGal3,529 netGalGal3,533 netGalGal3,536 netGalGal3,544 netGalGal3,548 netGalGal3,554 netGalGal3,565 netGalGal3,568 netGalGal3,580 netGalGal3,588 netGalGal3,590 netGalGal3,598 netGalGal3,604 netGalGal3,613 netGalGal3,616 netGalGal3,647 netGalGal3,652 netGalGal3,661 netGalGal3,665 netGalGal3,672 netGalGal3,695 netGalGal3,703 netGalGal3,773 netGalGal3,777 netGalGal3,785 netGalGal3,789 netGalGal3,793 netGalGal3,801 netGalGal3,846 netGalGal3,856 netGalGal3,875 netGalGal3,878 netGalGal3,890 netGalGal3,914 netGalGal3,956 netGalGal3,962 netGalGal3,980 netGalGal3,987 netGalGal3,999 netGalGal3,1008 netGalGal3,1029 netGalGal3,1069 netGalVar1,22 netGalVar1,41 netGalVar1,63 netGalVar1,77 netGalVar1,127 netGalVar1,140 netGalVar1,157 netGalVar1,166 netGalVar1,213 netGalVar1,217 netGalVar1,243 netGalVar1,253 netGalVar1,258 netGalVar1,266 netGalVar1,274 netGalVar1,278 netGalVar1,290 netGalVar1,308 netGalVar1,319 netGalVar1,333 netGalVar1,348 netGalVar1,354 netGalVar1,357 netGalVar1,372 netGalVar1,378 netGalVar1,382 netGalVar1,402 netGalVar1,408 netGalVar1,422 netGalVar1,440 netGalVar1,457 netGalVar1,460 netGalVar1,465 netGalVar1,478 netGalVar1,491 netGalVar1,493 netGalVar1,500 netGalVar1,503 netGalVar1,510 netGalVar1,516 netGalVar1,529 netGalVar1,540 netGalVar1,544 netGalVar1,547 netGalVar1,555 netGalVar1,559 netGalVar1,565 netGalVar1,576 netGalVar1,579 netGalVar1,591 netGalVar1,601 netGalVar1,603 netGalVar1,611 netGalVar1,617 netGalVar1,626 netGalVar1,629 netGalVar1,662 netGalVar1,667 netGalVar1,676 netGalVar1,680 netGalVar1,687 netGalVar1,710 netGalVar1,718 netGalVar1,788 netGalVar1,792 netGalVar1,800 netGalVar1,804 netGalVar1,808 netGalVar1,816 netGalVar1,861 netGalVar1,871 netGalVar1,890 netGalVar1,893 netGalVar1,905 netGalVar1,929 netGalVar1,971 netGalVar1,977 netGalVar1,995 netGalVar1,1002 netGalVar1,1014 netGalVar1,1023 netGalVar1,1044 netGalVar1,1084 netHg19,18 netHg19,37 netHg19,59 netHg19,71 netHg19,119 netHg19,132 netHg19,149 netHg19,156 netHg19,203 netHg19,207 netHg19,233 netHg19,243 netHg19,248 netHg19,256 netHg19,264 netHg19,268 netHg19,278 netHg19,296 netHg19,305 netHg19,319 netHg19,334 netHg19,340 netHg19,343 netHg19,358 netHg19,364 netHg19,368 netHg19,388 netHg19,394 netHg19,408 netHg19,426 netHg19,443 netHg19,446 netHg19,451 netHg19,464 netHg19,477 netHg19,479 netHg19,486 netHg19,489 netHg19,496 netHg19,502 netHg19,515 netHg19,526 netHg19,530 netHg19,533 netHg19,541 netHg19,545 netHg19,551 netHg19,562 netHg19,565 netHg19,577 netHg19,585 netHg19,587 netHg19,595 netHg19,601 netHg19,610 netHg19,613 netHg19,644 netHg19,649 netHg19,658 netHg19,662 netHg19,669 netHg19,692 netHg19,700 netHg19,770 netHg19,774 netHg19,782 netHg19,786 netHg19,790 netHg19,798 netHg19,843 netHg19,853 netHg19,872 netHg19,875 netHg19,887 netHg19,911 netHg19,953 netHg19,959 netHg19,977 netHg19,984 netHg19,996 netHg19,1005 netHg19,1026 netHg19,1066 netMm10,18 netMm10,37 netMm10,59 netMm10,71 netMm10,119 netMm10,132 netMm10,149 netMm10,156 netMm10,203 netMm10,207 netMm10,233 netMm10,243 netMm10,248 netMm10,256 netMm10,264 netMm10,268 netMm10,278 netMm10,296 netMm10,305 netMm10,319 netMm10,334 netMm10,340 netMm10,343 netMm10,358 netMm10,364 netMm10,368 netMm10,388 netMm10,394 netMm10,408 netMm10,426 netMm10,443 netMm10,446 netMm10,451 netMm10,464 netMm10,477 netMm10,479 netMm10,486 netMm10,489 netMm10,496 netMm10,502 netMm10,515 netMm10,526 netMm10,530 netMm10,533 netMm10,541 netMm10,545 netMm10,551 netMm10,562 netMm10,565 netMm10,577 netMm10,585 netMm10,587 netMm10,595 netMm10,601 netMm10,610 netMm10,613 netMm10,644 netMm10,649 netMm10,658 netMm10,662 netMm10,669 netMm10,692 netMm10,700 netMm10,770 netMm10,774 netMm10,782 netMm10,786 netMm10,790 netMm10,798 netMm10,843 netMm10,853 netMm10,872 netMm10,875 netMm10,887 netMm10,911 netMm10,953 netMm10,959 netMm10,977 netMm10,984 netMm10,996 netMm10,1005 netMm10,1026 netMm10,1066 netMm39,18 netMm39,37 netMm39,59 netMm39,71 netMm39,119 netMm39,132 netMm39,149 netMm39,156 netMm39,203 netMm39,207 netMm39,233 netMm39,243 netMm39,248 netMm39,256 netMm39,264 netMm39,268 netMm39,278 netMm39,296 netMm39,305 netMm39,319 netMm39,334 netMm39,340 netMm39,343 netMm39,358 netMm39,364 netMm39,368 netMm39,388 netMm39,394 netMm39,408 netMm39,426 netMm39,443 netMm39,446 netMm39,451 netMm39,464 netMm39,477 netMm39,479 netMm39,486 netMm39,489 netMm39,496 netMm39,502 netMm39,515 netMm39,526 netMm39,530 netMm39,533 netMm39,541 netMm39,545 netMm39,551 netMm39,562 netMm39,565 netMm39,577 netMm39,585 netMm39,587 netMm39,595 netMm39,601 netMm39,610 netMm39,613 netMm39,644 netMm39,649 netMm39,658 netMm39,662 netMm39,669 netMm39,692 netMm39,700 netMm39,770 netMm39,774 netMm39,782 netMm39,786 netMm39,790 netMm39,798 netMm39,843 netMm39,853 netMm39,872 netMm39,875 netMm39,887 netMm39,911 netMm39,953 netMm39,959 netMm39,977 netMm39,984 netMm39,996 netMm39,1005 netMm39,1026 netMm39,1066 netMonDom4,18 netMonDom4,37 netMonDom4,59 netMonDom4,71 netMonDom4,119 netMonDom4,132 netMonDom4,149 netMonDom4,156 netMonDom4,203 netMonDom4,207 netMonDom4,233 netMonDom4,243 netMonDom4,248 netMonDom4,256 netMonDom4,264 netMonDom4,268 netMonDom4,278 netMonDom4,296 netMonDom4,305 netMonDom4,319 netMonDom4,334 netMonDom4,340 netMonDom4,343 netMonDom4,358 netMonDom4,364 netMonDom4,368 netMonDom4,388 netMonDom4,394 netMonDom4,408 netMonDom4,426 netMonDom4,443 netMonDom4,446 netMonDom4,451 netMonDom4,464 netMonDom4,477 netMonDom4,479 netMonDom4,486 netMonDom4,489 netMonDom4,496 netMonDom4,502 netMonDom4,515 netMonDom4,526 netMonDom4,530 netMonDom4,533 netMonDom4,541 netMonDom4,545 netMonDom4,551 netMonDom4,562 netMonDom4,565 netMonDom4,577 netMonDom4,585 netMonDom4,587 netMonDom4,595 netMonDom4,601 netMonDom4,610 netMonDom4,613 netMonDom4,644 netMonDom4,649 netMonDom4,658 netMonDom4,662 netMonDom4,669 netMonDom4,692 netMonDom4,700 netMonDom4,770 netMonDom4,774 netMonDom4,782 netMonDom4,786 netMonDom4,790 netMonDom4,798 netMonDom4,843 netMonDom4,853 netMonDom4,872 netMonDom4,875 netMonDom4,887 netMonDom4,911 netMonDom4,953 netMonDom4,959 netMonDom4,977 netMonDom4,984 netMonDom4,996 netMonDom4,1005 netMonDom4,1026 netMonDom4,1066 netOryCun2,18 netOryCun2,37 netOryCun2,59 netOryCun2,71 netOryCun2,119 netOryCun2,132 netOryCun2,149 netOryCun2,156 netOryCun2,203 netOryCun2,207 netOryCun2,233 netOryCun2,243 netOryCun2,248 netOryCun2,256 netOryCun2,264 netOryCun2,268 netOryCun2,278 netOryCun2,296 netOryCun2,305 netOryCun2,319 netOryCun2,334 netOryCun2,340 netOryCun2,343 netOryCun2,358 netOryCun2,364 netOryCun2,368 netOryCun2,388 netOryCun2,394 netOryCun2,408 netOryCun2,426 netOryCun2,443 netOryCun2,446 netOryCun2,451 netOryCun2,464 netOryCun2,477 netOryCun2,479 netOryCun2,486 netOryCun2,489 netOryCun2,496 netOryCun2,502 netOryCun2,515 netOryCun2,526 netOryCun2,530 netOryCun2,533 netOryCun2,541 netOryCun2,545 netOryCun2,551 netOryCun2,562 netOryCun2,565 netOryCun2,577 netOryCun2,585 netOryCun2,587 netOryCun2,595 netOryCun2,601 netOryCun2,610 netOryCun2,613 netOryCun2,644 netOryCun2,649 netOryCun2,658 netOryCun2,662 netOryCun2,669 netOryCun2,692 netOryCun2,700 netOryCun2,770 netOryCun2,774 netOryCun2,782 netOryCun2,786 netOryCun2,790 netOryCun2,798 netOryCun2,843 netOryCun2,853 netOryCun2,872 netOryCun2,875 netOryCun2,887 netOryCun2,911 netOryCun2,953 netOryCun2,959 netOryCun2,977 netOryCun2,984 netOryCun2,996 netOryCun2,1005 netOryCun2,1026 netOryCun2,1066 netRn6,19 netRn6,38 netRn6,60 netRn6,73 netRn6,121 netRn6,134 netRn6,151 netRn6,158 netRn6,205 netRn6,209 netRn6,235 netRn6,245 netRn6,250 netRn6,258 netRn6,266 netRn6,270 netRn6,280 netRn6,298 netRn6,307 netRn6,322 netRn6,337 netRn6,343 netRn6,346 netRn6,361 netRn6,367 netRn6,371 netRn6,391 netRn6,397 netRn6,411 netRn6,429 netRn6,446 netRn6,449 netRn6,454 netRn6,467 netRn6,480 netRn6,482 netRn6,489 netRn6,492 netRn6,499 netRn6,505 netRn6,518 netRn6,529 netRn6,533 netRn6,536 netRn6,544 netRn6,548 netRn6,554 netRn6,565 netRn6,568 netRn6,580 netRn6,588 netRn6,590 netRn6,598 netRn6,604 netRn6,613 netRn6,616 netRn6,647 netRn6,652 netRn6,661 netRn6,665 netRn6,672 netRn6,695 netRn6,703 netRn6,773 netRn6,777 netRn6,785 netRn6,789 netRn6,793 netRn6,801 netRn6,846 netRn6,856 netRn6,875 netRn6,878 netRn6,890 netRn6,914 netRn6,956 netRn6,962 netRn6,980 netRn6,987 netRn6,999 netRn6,1008 netRn6,1029 netRn6,1069 nscanGene,16 nscanGene,24 nscanGene,44 nscanGene,63 nscanGene,87 nscanGene,91 nscanGene,112 nscanGene,123 nscanGene,148 nscanGene,164 nscanGene,189 nscanGene,218 nscanGene,254 nscanGene,315 quality,12 quality,17 quality,25 quality,27 quality,33 quality,36 quality,39 quality,48 quality,51 quality,69 quality,73 quality,82 quality,86 quality,94 quality,98 refGene,16 refGene,30 refGene,37 refGene,47 refGene,74 refGene,89 refGene,96 refGene,100 refGene,104 refGene,115 refGene,130 refGene,133 refGene,136 refGene,150 refGene,156 refGene,161 refGene,166 refGene,174 refGene,202 refGene,207 refGene,222 refGene,237 refGene,250 refGene,262 refGene,286 refGene,289 refGene,305 refGene,314 refGene,337 refGene,345 refSeqComposite,12 refSeqComposite,27 refSeqComposite,43 refSeqComposite,52 refSeqComposite,56 refSeqComposite,66 refSeqComposite,90 refSeqComposite,98 refSeqComposite,133 refSeqComposite,165 refSeqComposite,169 refSeqComposite,185 refSeqComposite,240 refSeqComposite,281 refSeqComposite,284 refSeqComposite,290 refSeqComposite,307 refSeqComposite,313 refSeqComposite,325 refSeqComposite,333 refSeqComposite,369 refSeqComposite,373 refSeqComposite,386 refSeqComposite,393 refSeqComposite,398 refSeqComposite,402 refSeqComposite,441 refSeqComposite,447 refSeqComposite,451 refSeqComposite,463 refSeqComposite,497 refSeqComposite,507 refSeqComposite,529 refSeqComposite,560 refSeqComposite,571 refSeqComposite,579 refSeqComposite,587 refSeqComposite,599 refSeqComposite,606 refSeqComposite,610 refSeqComposite,614 refSeqComposite,635 refSeqComposite,648 refSeqComposite,658 refSeqComposite,671 refSeqComposite,682 refSeqComposite,696 refSeqComposite,711 refSeqComposite,716 refSeqComposite,732 refSeqComposite,736 refSeqComposite,739 refSeqComposite,745 refSeqComposite,752 refSeqComposite,757 refSeqComposite,761 refSeqComposite,774 refSeqComposite,780 refSeqComposite,788 refSeqComposite,800 refSeqComposite,811 refSeqComposite,839 refSeqComposite,844 refSeqComposite,859 refSeqComposite,868 refSeqComposite,879 refSeqComposite,884 refSeqComposite,888 refSeqComposite,907 refSeqComposite,913 refSeqComposite,921 refSeqComposite,927 refSeqComposite,977 refSeqComposite,1001 refSeqComposite,1005 refSeqComposite,1008 refSeqComposite,1012 refSeqComposite,1016 refSeqComposite,1051 refSeqComposite,1063 refSeqComposite,1110 refSeqComposite,1115 refSeqComposite,1121 refSeqComposite,1130 refSeqComposite,1144 refSeqComposite,1159 refSeqComposite,1176 refSeqComposite,1185 refSeqComposite,1190 refSeqComposite,1198 refSeqComposite,1212 refSeqComposite,1220 refSeqComposite,1233 refSeqComposite,1257 refSeqComposite,1260 refSeqComposite,1276 refSeqComposite,1285 refSeqComposite,1292 refSeqComposite,1310 refSeqComposite,1318 refSeqComposite,1339 refSeqComposite,1346 refSeqComposite,1367 refSeqComposite,1370 refSeqComposite,1387 refSeqComposite,1397 refSeqComposite,1426 refSeqComposite,1449 refSeqComposite,1465 refSeqComposite,1470 refSeqComposite,1473 refSeqComposite,1498 refSeqComposite,1516 refSeqComposite,1529 refSeqComposite,1547 refSeqComposite,1572 refSeqComposite,1577 refSeqComposite,1581 refSeqComposite,1593 refSeqComposite,1598 refSeqComposite,1602 refSeqComposite,1606 refSeqComposite,1612 refSeqComposite,1644 refSeqComposite,1649 refSeqComposite,1652 refSeqComposite,1659 refSeqComposite,1669 refSeqComposite,1698 refSeqComposite,1727 refSeqComposite,1735 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 tRNAs,52 tRNAs,114 tRNAs,139 tRNAs,156 tRNAs,204 tRNAs,216 tRNAs,246 tRNAs,317 tRNAs,321 tRNAs,336 tRNAs,363 transMapEnsemblV5,24 transMapEnsemblV5,34 transMapEnsemblV5,71 transMapEnsemblV5,86 transMapEnsemblV5,99 transMapEnsemblV5,120 transMapEnsemblV5,127 transMapEnsemblV5,162 transMapEnsemblV5,179 transMapEnsemblV5,202 transMapEnsemblV5,210 transMapEnsemblV5,253 transMapEnsemblV5,257 transMapEnsemblV5,261 transMapEnsemblV5,273 transMapEnsemblV5,279 transMapEnsemblV5,296 transMapEnsemblV5,304 transMapEnsemblV5,311 transMapEnsemblV5,313 transMapEnsemblV5,324 transMapEnsemblV5,329 transMapEnsemblV5,333 transMapEnsemblV5,342 transMapEnsemblV5,346 transMapEnsemblV5,348 transMapEnsemblV5,379 transMapEnsemblV5,406 transMapEnsemblV5,416 transMapEnsemblV5,419 transMapEnsemblV5,441 transMapEnsemblV5,450 transMapEnsemblV5,463 transMapEnsemblV5,473 transMapEnsemblV5,485 transMapEnsemblV5,506 transMapEnsemblV5,520 transMapEnsemblV5,531 transMapEnsemblV5,535 transMapEnsemblV5,541 transMapEnsemblV5,580 transMapEnsemblV5,588 transMapEnsemblV5,606 transMapEnsemblV5,622 transMapEnsemblV5,645 transMapEnsemblV5,694 transMapEnsemblV5,706 transMapEnsemblV5,808 transMapEstV5,22 transMapEstV5,32 transMapEstV5,40 transMapEstV5,55 transMapEstV5,68 transMapEstV5,89 transMapEstV5,96 transMapEstV5,131 transMapEstV5,148 transMapEstV5,171 transMapEstV5,179 transMapEstV5,222 transMapEstV5,226 transMapEstV5,230 transMapEstV5,242 transMapEstV5,248 transMapEstV5,265 transMapEstV5,273 transMapEstV5,280 transMapEstV5,282 transMapEstV5,293 transMapEstV5,298 transMapEstV5,302 transMapEstV5,311 transMapEstV5,315 transMapEstV5,317 transMapEstV5,348 transMapEstV5,375 transMapEstV5,385 transMapEstV5,388 transMapEstV5,410 transMapEstV5,419 transMapEstV5,432 transMapEstV5,442 transMapEstV5,454 transMapEstV5,475 transMapEstV5,489 transMapEstV5,500 transMapEstV5,504 transMapEstV5,510 transMapEstV5,549 transMapEstV5,557 transMapEstV5,575 transMapEstV5,591 transMapEstV5,614 transMapEstV5,663 transMapEstV5,675 transMapEstV5,777 transMapRefSeqV5,22 transMapRefSeqV5,32 transMapRefSeqV5,40 transMapRefSeqV5,55 transMapRefSeqV5,68 transMapRefSeqV5,89 transMapRefSeqV5,96 transMapRefSeqV5,131 transMapRefSeqV5,148 transMapRefSeqV5,171 transMapRefSeqV5,179 transMapRefSeqV5,222 transMapRefSeqV5,226 transMapRefSeqV5,230 transMapRefSeqV5,242 transMapRefSeqV5,248 transMapRefSeqV5,265 transMapRefSeqV5,273 transMapRefSeqV5,280 transMapRefSeqV5,282 transMapRefSeqV5,293 transMapRefSeqV5,298 transMapRefSeqV5,302 transMapRefSeqV5,311 transMapRefSeqV5,315 transMapRefSeqV5,317 transMapRefSeqV5,348 transMapRefSeqV5,375 transMapRefSeqV5,385 transMapRefSeqV5,388 transMapRefSeqV5,410 transMapRefSeqV5,419 transMapRefSeqV5,432 transMapRefSeqV5,442 transMapRefSeqV5,454 transMapRefSeqV5,475 transMapRefSeqV5,489 transMapRefSeqV5,500 transMapRefSeqV5,504 transMapRefSeqV5,510 transMapRefSeqV5,549 transMapRefSeqV5,557 transMapRefSeqV5,575 transMapRefSeqV5,591 transMapRefSeqV5,614 transMapRefSeqV5,663 transMapRefSeqV5,675 transMapRefSeqV5,777 transMapRnaV5,22 transMapRnaV5,32 transMapRnaV5,40 transMapRnaV5,55 transMapRnaV5,68 transMapRnaV5,89 transMapRnaV5,96 transMapRnaV5,131 transMapRnaV5,148 transMapRnaV5,171 transMapRnaV5,179 transMapRnaV5,222 transMapRnaV5,226 transMapRnaV5,230 transMapRnaV5,242 transMapRnaV5,248 transMapRnaV5,265 transMapRnaV5,273 transMapRnaV5,280 transMapRnaV5,282 transMapRnaV5,293 transMapRnaV5,298 transMapRnaV5,302 transMapRnaV5,311 transMapRnaV5,315 transMapRnaV5,317 transMapRnaV5,348 transMapRnaV5,375 transMapRnaV5,385 transMapRnaV5,388 transMapRnaV5,410 transMapRnaV5,419 transMapRnaV5,432 transMapRnaV5,442 transMapRnaV5,454 transMapRnaV5,475 transMapRnaV5,489 transMapRnaV5,500 transMapRnaV5,504 transMapRnaV5,510 transMapRnaV5,549 transMapRnaV5,557 transMapRnaV5,575 transMapRnaV5,591 transMapRnaV5,614 transMapRnaV5,663 transMapRnaV5,675 transMapRnaV5,777 transMapV5,21 transMapV5,31 transMapV5,39 transMapV5,56 transMapV5,92 transMapV5,99 transMapV5,104 transMapV5,122 transMapV5,127 transMapV5,133 transMapV5,137 transMapV5,174 transMapV5,195 transMapV5,202 transMapV5,237 transMapV5,254 transMapV5,277 transMapV5,285 transMapV5,328 transMapV5,332 transMapV5,336 transMapV5,348 transMapV5,354 transMapV5,371 transMapV5,379 transMapV5,386 transMapV5,388 transMapV5,399 transMapV5,404 transMapV5,408 transMapV5,417 transMapV5,421 transMapV5,423 transMapV5,454 transMapV5,481 transMapV5,491 transMapV5,494 transMapV5,516 transMapV5,525 transMapV5,538 transMapV5,548 transMapV5,560 transMapV5,581 transMapV5,595 transMapV5,606 transMapV5,610 transMapV5,616 transMapV5,655 transMapV5,663 transMapV5,681 transMapV5,697 transMapV5,720 transMapV5,769 transMapV5,781 transMapV5,883 ucscToRefSeq,21 ucscToRefSeq,27 ucscToRefSeq,32 ucscToRefSeq,37 uniprot,22 uniprot,40 uniprot,53 uniprot,69 uniprot,81 uniprot,87 uniprot,94 uniprot,102 uniprot,119 uniprot,184 uniprot,202 uniprot,215 uniprot,233 uniprot,259 uniprot,270 uniprot,281 uniprot,308 uniprot,379 uniprot,410 uniprot,421 uniprot,428 uniprot,444 uniprot,463 uniprot,485 uniprot,493 uniprot,510 uniprot,527 uniprot,534 uniprot,539 uniprot,543 uniprot,547 uniprot,562 uniprot,571 uniprot,607 uniprot,640 uniprot,649 uniprot,668 uniprot,698 uniprot,748 uniprot,785 uniprot,789 uniprot,791 uniprot,797 uniprot,802 uniprot,810 uniprot,812 uniprot,819 uniprot,832 uniprot,836 uniprot,855 uniprot,873 uniprot,883 uniprot,903 uniprot,913 uniprot,923 uniprot,927 uniprot,935 uniprot,944 uniprot,947 uniprot,953 uniprot,961 uniprot,969 uniprot,1009 uniprot,1036 uniprot,1039 uniprot,1054 uniprot,1090 uniprot,1112 uniprot,1126 uniprot,1136 uniprot,1140 uniprot,1156 uniprot,1172 uniprot,1212 uniprot,1221 uniprot,1243 uniprot,1253 uniprot,1267 uniprot,1273 uniprot,1278 uniprot,1294 uniprot,1303 uniprot,1307 uniprot,1321 uniprot,1332 uniprot,1339 uniprot,1358 uniprot,1372 uniprot,1376 uniprot,1384 uniprot,1388 uniprot,1409 uniprot,1414 uniprot,1428 uniprot,1431 uniprot,1462 uniprot,1508 uniprot,1512 uniprot,1519 uniprot,1522 uniprot,1527 uniprot,1535 uniprot,1547 uniprot,1574 uniprot,1582 uniprot,1588 uniprot,1592 uniprot,1595 uniprot,1606 uniprot,1609 uniprot,1612 uniprot,1618 uniprot,1621 uniprot,1628 uniprot,1640 uniprot,1664 uniprot,1667 uniprot,1678 uniprot,1681 uniprot,1701 uniprot,1707 uniprot,1711 uniprot,1719 uniprot,1723 uniprot,1729 uniprot,1743 uniprot,1746 uniprot,1753 uniprot,1773 uniprot,1796 uniprot,1857 uniprot,1861 uniprot,1893 uniprot,1963 uniprot,1988 uniprot,1992 uniprot,2024 uniprot,2029 windowmaskerSdust,22 windowmaskerSdust,28 windowmaskerSdust,32 windowmaskerSdust,36 windowmaskerSdust,42 windowmaskerSdust,55 windowmaskerSdust,74 windowmaskerSdust,81 xenoMrna,38 xenoMrna,49 xenoMrna,61 xenoMrna,71 xenoMrna,74 xenoMrna,77 xenoMrna,84 xenoMrna,92 xenoMrna,96 xenoMrna,99 xenoMrna,105 xenoMrna,123 xenoMrna,128 xenoMrna,131 xenoMrna,146 xenoMrna,150 xenoMrna,160 xenoMrna,172 xenoMrna,182 xenoMrna,187 xenoMrna,197 xenoMrna,202 xenoMrna,209 xenoMrna,220 xenoMrna,223 xenoMrna,226 xenoMrna,231 xenoMrna,241 xenoMrna,244 xenoMrna,250 xenoMrna,260 xenoMrna,267 xenoMrna,276 xenoMrna,297 xenoMrna,307 xenoMrna,339 xenoMrna,346 xenoMrna,360 xenoMrna,369 xenoMrna,377 xenoMrna,386 xenoMrna,395 xenoMrna,412 xenoMrna,419 xenoMrna,430 xenoMrna,453 xenoMrna,461 xenoMrna,466 xenoMrna,481 xenoMrna,484 xenoMrna,501 xenoMrna,510 xenoMrna,516 xenoMrna,529 xenoMrna,595 xenoRefGene,28 xenoRefGene,35 xenoRefGene,50 xenoRefGene,57 xenoRefGene,61 xenoRefGene,65 xenoRefGene,76 xenoRefGene,91 xenoRefGene,94 xenoRefGene,97 xenoRefGene,111 xenoRefGene,117 xenoRefGene,122 xenoRefGene,127 xenoRefGene,135 xenoRefGene,163 xenoRefGene,168 xenoRefGene,183 xenoRefGene,198 xenoRefGene,211 xenoRefGene,218 xenoRefGene,223 xenoRefGene,247 xenoRefGene,250 xenoRefGene,266 xenoRefGene,275 xenoRefGene,298 their nestedRepeats,190 uniprot,62 uniprot,723 uniprot,1101 them chainGalGal3,808 chainGalVar1,823 chainHg19,805 chainMm10,805 chainMm39,805 chainMonDom4,805 chainNetGalGal3,811 chainNetGalVar1,826 chainNetHg19,808 chainNetMm10,807 chainNetMm39,808 chainNetMonDom4,808 chainNetOryCun2,808 chainNetRn6,811 chainOryCun2,805 chainRn6,808 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netGalGal3,808 netGalVar1,823 netHg19,805 netMm10,805 netMm39,805 netMonDom4,805 netOryCun2,805 netRn6,808 rmsk,318 tRNAs,280 uniprot,20 uniprot,173 uniprot,483 then chainGalGal3,658 chainGalGal3,797 chainGalGal3,882 chainGalVar1,673 chainGalVar1,812 chainGalVar1,897 chainHg19,655 chainHg19,794 chainHg19,879 chainMm10,655 chainMm10,794 chainMm10,879 chainMm39,655 chainMm39,794 chainMm39,879 chainMonDom4,655 chainMonDom4,794 chainMonDom4,879 chainNetGalGal3,661 chainNetGalGal3,800 chainNetGalGal3,885 chainNetGalVar1,676 chainNetGalVar1,815 chainNetGalVar1,900 chainNetHg19,658 chainNetHg19,797 chainNetHg19,882 chainNetMm10,657 chainNetMm10,796 chainNetMm10,881 chainNetMm39,658 chainNetMm39,797 chainNetMm39,882 chainNetMonDom4,658 chainNetMonDom4,797 chainNetMonDom4,882 chainNetOryCun2,658 chainNetOryCun2,797 chainNetOryCun2,882 chainNetRn6,661 chainNetRn6,800 chainNetRn6,885 chainOryCun2,655 chainOryCun2,794 chainOryCun2,879 chainRn6,658 chainRn6,797 chainRn6,882 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netGalGal3,658 netGalGal3,797 netGalGal3,882 netGalVar1,673 netGalVar1,812 netGalVar1,897 netHg19,655 netHg19,794 netHg19,879 netMm10,655 netMm10,794 netMm10,879 netMm39,655 netMm39,794 netMm39,879 netMonDom4,655 netMonDom4,794 netMonDom4,879 netOryCun2,655 netOryCun2,794 netOryCun2,879 netRn6,658 netRn6,797 netRn6,882 tRNAs,54 transMapV5,130 uniprot,1083 uniprot,1516 there HLTOGAannotvHg38v1,237 HLTOGAannotvHg38v1,280 cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 est,622 intronEst,703 nscanGene,175 transMapEnsemblV5,453 transMapEstV5,422 transMapRefSeqV5,422 transMapRnaV5,422 transMapV5,528 uniprot,705 uniprot,1092 xenoMrna,117 therefore gold,113 refSeqComposite,1635 uniprot,968 uniprot,1145 these HLTOGAannotvHg38v1,158 HLTOGAannotvHg38v1,187 HLTOGAannotvHg38v1,261 augustusGene,95 augustusGene,190 chainGalGal3,53 chainGalGal3,104 chainGalGal3,416 chainGalGal3,670 chainGalVar1,56 chainGalVar1,110 chainGalVar1,427 chainGalVar1,685 chainHg19,52 chainHg19,102 chainHg19,413 chainHg19,667 chainMm10,52 chainMm10,102 chainMm10,413 chainMm10,667 chainMm39,52 chainMm39,102 chainMm39,413 chainMm39,667 chainMonDom4,52 chainMonDom4,102 chainMonDom4,413 chainMonDom4,667 chainNetGalGal3,56 chainNetGalGal3,107 chainNetGalGal3,419 chainNetGalGal3,673 chainNetGalVar1,59 chainNetGalVar1,113 chainNetGalVar1,430 chainNetGalVar1,688 chainNetHg19,55 chainNetHg19,105 chainNetHg19,416 chainNetHg19,670 chainNetMm10,54 chainNetMm10,104 chainNetMm10,415 chainNetMm10,669 chainNetMm39,55 chainNetMm39,105 chainNetMm39,416 chainNetMm39,670 chainNetMonDom4,55 chainNetMonDom4,105 chainNetMonDom4,416 chainNetMonDom4,670 chainNetOryCun2,55 chainNetOryCun2,105 chainNetOryCun2,416 chainNetOryCun2,670 chainNetRn6,56 chainNetRn6,107 chainNetRn6,419 chainNetRn6,673 chainOryCun2,52 chainOryCun2,102 chainOryCun2,413 chainOryCun2,667 chainRn6,53 chainRn6,104 chainRn6,416 chainRn6,670 ensGene,10 ensGene,154 est,590 gap,17 gap,103 intronEst,671 microsat,24 nestedRepeats,262 nestedRepeats,266 netGalGal3,53 netGalGal3,104 netGalGal3,416 netGalGal3,670 netGalVar1,56 netGalVar1,110 netGalVar1,427 netGalVar1,685 netHg19,52 netHg19,102 netHg19,413 netHg19,667 netMm10,52 netMm10,102 netMm10,413 netMm10,667 netMm39,52 netMm39,102 netMm39,413 netMm39,667 netMonDom4,52 netMonDom4,102 netMonDom4,413 netMonDom4,667 netOryCun2,52 netOryCun2,102 netOryCun2,413 netOryCun2,667 netRn6,53 netRn6,104 netRn6,416 netRn6,670 nscanGene,153 nscanGene,241 refSeqComposite,322 refSeqComposite,332 refSeqComposite,797 refSeqComposite,1296 refSeqComposite,1432 rmsk,235 simpleRepeat,33 tRNAs,56 tRNAs,223 tRNAs,257 tRNAs,303 tRNAs,359 transMapEnsemblV5,460 transMapEnsemblV5,469 transMapEnsemblV5,524 transMapEnsemblV5,585 transMapEstV5,429 transMapEstV5,438 transMapEstV5,493 transMapEstV5,554 transMapRefSeqV5,429 transMapRefSeqV5,438 transMapRefSeqV5,493 transMapRefSeqV5,554 transMapRnaV5,429 transMapRnaV5,438 transMapRnaV5,493 transMapRnaV5,554 transMapV5,12 transMapV5,535 transMapV5,544 transMapV5,599 transMapV5,660 uniprot,99 uniprot,130 uniprot,1160 thesis chainGalGal3,1028 chainGalVar1,1043 chainHg19,1025 chainMm10,1025 chainMm39,1025 chainMonDom4,1025 chainNetGalGal3,1031 chainNetGalVar1,1046 chainNetHg19,1028 chainNetMm10,1027 chainNetMm39,1028 chainNetMonDom4,1028 chainNetOryCun2,1028 chainNetRn6,1031 chainOryCun2,1025 chainRn6,1028 netGalGal3,1028 netGalVar1,1043 netHg19,1025 netMm10,1025 netMm39,1025 netMonDom4,1025 netOryCun2,1025 netRn6,1028 they chainGalGal3,333 chainGalVar1,344 chainHg19,330 chainMm10,330 chainMm39,330 chainMonDom4,330 chainNetGalGal3,336 chainNetGalVar1,347 chainNetHg19,333 chainNetMm10,332 chainNetMm39,333 chainNetMonDom4,333 chainNetOryCun2,333 chainNetRn6,336 chainOryCun2,330 chainRn6,333 netGalGal3,333 netGalVar1,344 netHg19,330 netMm10,330 netMm39,330 netMonDom4,330 netOryCun2,330 netRn6,333 refSeqComposite,248 refSeqComposite,292 refSeqComposite,357 refSeqComposite,419 tRNAs,188 tRNAs,267 uniprot,179 thibaud-nissen refGene,366 refSeqComposite,1756 xenoRefGene,326 thick chainGalGal3,44 chainGalVar1,47 chainHg19,43 chainMm10,43 chainMm39,43 chainMonDom4,43 chainNetGalGal3,47 chainNetGalVar1,50 chainNetHg19,46 chainNetMm10,45 chainNetMm39,46 chainNetMonDom4,46 chainNetOryCun2,46 chainNetRn6,47 chainOryCun2,43 chainRn6,44 netGalGal3,44 netGalVar1,47 netHg19,43 netMm10,43 netMm39,43 netMonDom4,43 netOryCun2,43 netRn6,44 refSeqComposite,997 refSeqComposite,1013 thin refSeqComposite,995 refSeqComposite,1002 this HLTOGAannotvHg38v1,315 augustusGene,13 augustusGene,106 augustusGene,224 blastHg18KG,14 blastHg18KG,191 chainGalGal3,14 chainGalGal3,175 chainGalGal3,303 chainGalGal3,403 chainGalGal3,701 chainGalGal3,823 chainGalVar1,17 chainGalVar1,183 chainGalVar1,315 chainGalVar1,414 chainGalVar1,716 chainGalVar1,838 chainHg19,13 chainHg19,173 chainHg19,301 chainHg19,400 chainHg19,698 chainHg19,820 chainMm10,13 chainMm10,173 chainMm10,301 chainMm10,400 chainMm10,698 chainMm10,820 chainMm39,13 chainMm39,173 chainMm39,301 chainMm39,400 chainMm39,698 chainMm39,820 chainMonDom4,13 chainMonDom4,173 chainMonDom4,301 chainMonDom4,400 chainMonDom4,698 chainMonDom4,820 chainNetGalGal3,17 chainNetGalGal3,178 chainNetGalGal3,306 chainNetGalGal3,406 chainNetGalGal3,704 chainNetGalGal3,826 chainNetGalVar1,20 chainNetGalVar1,186 chainNetGalVar1,318 chainNetGalVar1,417 chainNetGalVar1,719 chainNetGalVar1,841 chainNetHg19,16 chainNetHg19,176 chainNetHg19,304 chainNetHg19,403 chainNetHg19,701 chainNetHg19,823 chainNetMm10,15 chainNetMm10,175 chainNetMm10,303 chainNetMm10,402 chainNetMm10,700 chainNetMm10,822 chainNetMm39,16 chainNetMm39,176 chainNetMm39,304 chainNetMm39,403 chainNetMm39,701 chainNetMm39,823 chainNetMonDom4,16 chainNetMonDom4,176 chainNetMonDom4,304 chainNetMonDom4,403 chainNetMonDom4,701 chainNetMonDom4,823 chainNetOryCun2,16 chainNetOryCun2,176 chainNetOryCun2,304 chainNetOryCun2,403 chainNetOryCun2,701 chainNetOryCun2,823 chainNetRn6,17 chainNetRn6,178 chainNetRn6,306 chainNetRn6,406 chainNetRn6,704 chainNetRn6,826 chainOryCun2,13 chainOryCun2,173 chainOryCun2,301 chainOryCun2,400 chainOryCun2,698 chainOryCun2,820 chainRn6,14 chainRn6,175 chainRn6,303 chainRn6,403 chainRn6,701 chainRn6,823 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ensGene,119 ensGene,135 est,13 est,50 est,115 est,142 est,378 est,415 est,595 est,631 est,644 est,726 gap,8 gap,42 gap,83 gap,115 gc5Base,38 gc5Base,77 genscan,11 genscan,65 genscan,128 gold,9 gold,60 gold,129 intronEst,14 intronEst,134 intronEst,196 intronEst,223 intronEst,459 intronEst,496 intronEst,676 intronEst,712 intronEst,725 intronEst,807 intronEst,810 microsat,11 microsat,50 microsat,99 mrna,31 mrna,61 mrna,88 mrna,324 mrna,352 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netGalGal3,14 netGalGal3,175 netGalGal3,303 netGalGal3,403 netGalGal3,701 netGalGal3,823 netGalVar1,17 netGalVar1,183 netGalVar1,315 netGalVar1,414 netGalVar1,716 netGalVar1,838 netHg19,13 netHg19,173 netHg19,301 netHg19,400 netHg19,698 netHg19,820 netMm10,13 netMm10,173 netMm10,301 netMm10,400 netMm10,698 netMm10,820 netMm39,13 netMm39,173 netMm39,301 netMm39,400 netMm39,698 netMm39,820 netMonDom4,13 netMonDom4,173 netMonDom4,301 netMonDom4,400 netMonDom4,698 netMonDom4,820 netOryCun2,13 netOryCun2,173 netOryCun2,301 netOryCun2,400 netOryCun2,698 netOryCun2,820 netRn6,14 netRn6,175 netRn6,303 netRn6,403 netRn6,701 netRn6,823 nscanGene,10 nscanGene,246 quality,54 refGene,40 refGene,86 refGene,124 refGene,179 refGene,218 refGene,254 refGene,320 refSeqComposite,58 refSeqComposite,145 refSeqComposite,501 refSeqComposite,565 refSeqComposite,726 refSeqComposite,816 refSeqComposite,855 refSeqComposite,1390 refSeqComposite,1438 refSeqComposite,1626 refSeqComposite,1712 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 tRNAs,14 tRNAs,134 transMapEnsemblV5,15 transMapEnsemblV5,96 transMapEnsemblV5,106 transMapEnsemblV5,134 transMapEnsemblV5,288 transMapEnsemblV5,677 transMapEstV5,13 transMapEstV5,65 transMapEstV5,75 transMapEstV5,103 transMapEstV5,257 transMapEstV5,646 transMapRefSeqV5,14 transMapRefSeqV5,65 transMapRefSeqV5,75 transMapRefSeqV5,103 transMapRefSeqV5,257 transMapRefSeqV5,646 transMapRnaV5,14 transMapRnaV5,65 transMapRnaV5,75 transMapRnaV5,103 transMapRnaV5,257 transMapRnaV5,646 transMapV5,171 transMapV5,181 transMapV5,209 transMapV5,363 transMapV5,752 ucscToRefSeq,9 ucscToRefSeq,40 uniprot,12 uniprot,134 uniprot,149 uniprot,218 uniprot,220 uniprot,653 uniprot,663 uniprot,871 uniprot,878 uniprot,1018 uniprot,1058 uniprot,1063 uniprot,1248 uniprot,1259 uniprot,1352 uniprot,1447 uniprot,1530 uniprot,1553 uniprot,1562 uniprot,1657 uniprot,1674 uniprot,1688 uniprot,1939 windowmaskerSdust,13 windowmaskerSdust,49 windowmaskerSdust,87 xenoMrna,12 xenoMrna,35 xenoMrna,65 xenoMrna,135 xenoMrna,162 xenoMrna,398 xenoMrna,426 xenoRefGene,12 xenoRefGene,38 xenoRefGene,47 xenoRefGene,85 xenoRefGene,140 xenoRefGene,179 xenoRefGene,215 xenoRefGene,281 those est,371 est,404 intronEst,452 intronEst,485 microsat,62 mrna,317 nestedRepeats,272 refGene,268 refSeqComposite,219 refSeqComposite,348 refSeqComposite,1239 tRNAs,176 uniprot,729 xenoMrna,391 xenoMrna,491 xenoRefGene,229 thousands chainGalGal3,256 chainGalVar1,264 chainHg19,254 chainMm10,254 chainMm39,254 chainMonDom4,254 chainNetGalGal3,259 chainNetGalVar1,267 chainNetHg19,257 chainNetMm10,256 chainNetMm39,257 chainNetMonDom4,257 chainNetOryCun2,257 chainNetRn6,259 chainOryCun2,254 chainRn6,256 netGalGal3,256 netGalVar1,264 netHg19,254 netMm10,254 netMm39,254 netMonDom4,254 netOryCun2,254 netRn6,256 three uniprot,1227 three-step uniprot,989 through gap,76 nestedRepeats,97 refGene,129 refSeqComposite,731 refSeqComposite,1325 refSeqComposite,1363 rmsk,309 transMapEnsemblV5,530 transMapEstV5,499 transMapRefSeqV5,499 transMapRnaV5,499 transMapV5,605 uniprot,98 uniprot,133 uniprot,633 uniprot,804 uniprot,1521 xenoRefGene,90 thus HLTOGAannotvHg38v1,279 time chainGalGal3,806 chainGalVar1,821 chainHg19,803 chainMm10,803 chainMm39,803 chainMonDom4,803 chainNetGalGal3,809 chainNetGalVar1,824 chainNetHg19,806 chainNetMm10,805 chainNetMm39,806 chainNetMonDom4,806 chainNetOryCun2,806 chainNetRn6,809 chainOryCun2,803 chainRn6,806 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netGalGal3,806 netGalVar1,821 netHg19,803 netMm10,803 netMm39,803 netMonDom4,803 netOryCun2,803 netRn6,806 tissue est,207 est,242 est,257 intronEst,288 intronEst,323 intronEst,338 mrna,153 mrna,188 mrna,203 xenoMrna,227 xenoMrna,262 xenoMrna,277 tissues est,250 intronEst,331 mrna,196 xenoMrna,270 tm tRNAs,369 tRNAs,441 to HLTOGAannotvHg38v1,18 HLTOGAannotvHg38v1,90 HLTOGAannotvHg38v1,99 HLTOGAannotvHg38v1,106 HLTOGAannotvHg38v1,208 HLTOGAannotvHg38v1,255 HLTOGAannotvHg38v1,289 augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 blastHg18KG,56 blastHg18KG,189 chainGalGal3,24 chainGalGal3,72 chainGalGal3,147 chainGalGal3,217 chainGalGal3,229 chainGalGal3,324 chainGalGal3,335 chainGalGal3,340 chainGalGal3,352 chainGalGal3,358 chainGalGal3,381 chainGalGal3,462 chainGalGal3,476 chainGalGal3,560 chainGalGal3,663 chainGalGal3,799 chainGalGal3,811 chainGalGal3,851 chainGalGal3,874 chainGalGal3,884 chainGalVar1,27 chainGalVar1,76 chainGalVar1,153 chainGalVar1,225 chainGalVar1,237 chainGalVar1,335 chainGalVar1,346 chainGalVar1,351 chainGalVar1,363 chainGalVar1,369 chainGalVar1,392 chainGalVar1,473 chainGalVar1,487 chainGalVar1,571 chainGalVar1,678 chainGalVar1,814 chainGalVar1,826 chainGalVar1,866 chainGalVar1,889 chainGalVar1,899 chainHg19,23 chainHg19,70 chainHg19,145 chainHg19,215 chainHg19,227 chainHg19,321 chainHg19,332 chainHg19,337 chainHg19,349 chainHg19,355 chainHg19,378 chainHg19,459 chainHg19,473 chainHg19,557 chainHg19,660 chainHg19,796 chainHg19,808 chainHg19,848 chainHg19,871 chainHg19,881 chainMm10,23 chainMm10,70 chainMm10,145 chainMm10,215 chainMm10,227 chainMm10,321 chainMm10,332 chainMm10,337 chainMm10,349 chainMm10,355 chainMm10,378 chainMm10,459 chainMm10,473 chainMm10,557 chainMm10,660 chainMm10,796 chainMm10,808 chainMm10,848 chainMm10,871 chainMm10,881 chainMm39,23 chainMm39,70 chainMm39,145 chainMm39,215 chainMm39,227 chainMm39,321 chainMm39,332 chainMm39,337 chainMm39,349 chainMm39,355 chainMm39,378 chainMm39,459 chainMm39,473 chainMm39,557 chainMm39,660 chainMm39,796 chainMm39,808 chainMm39,848 chainMm39,871 chainMm39,881 chainMonDom4,23 chainMonDom4,70 chainMonDom4,145 chainMonDom4,215 chainMonDom4,227 chainMonDom4,321 chainMonDom4,332 chainMonDom4,337 chainMonDom4,349 chainMonDom4,355 chainMonDom4,378 chainMonDom4,459 chainMonDom4,473 chainMonDom4,557 chainMonDom4,660 chainMonDom4,796 chainMonDom4,808 chainMonDom4,848 chainMonDom4,871 chainMonDom4,881 chainNetGalGal3,27 chainNetGalGal3,75 chainNetGalGal3,150 chainNetGalGal3,220 chainNetGalGal3,232 chainNetGalGal3,327 chainNetGalGal3,338 chainNetGalGal3,343 chainNetGalGal3,355 chainNetGalGal3,361 chainNetGalGal3,384 chainNetGalGal3,465 chainNetGalGal3,479 chainNetGalGal3,563 chainNetGalGal3,666 chainNetGalGal3,802 chainNetGalGal3,814 chainNetGalGal3,854 chainNetGalGal3,877 chainNetGalGal3,887 chainNetGalVar1,30 chainNetGalVar1,79 chainNetGalVar1,156 chainNetGalVar1,228 chainNetGalVar1,240 chainNetGalVar1,338 chainNetGalVar1,349 chainNetGalVar1,354 chainNetGalVar1,366 chainNetGalVar1,372 chainNetGalVar1,395 chainNetGalVar1,476 chainNetGalVar1,490 chainNetGalVar1,574 chainNetGalVar1,681 chainNetGalVar1,817 chainNetGalVar1,829 chainNetGalVar1,869 chainNetGalVar1,892 chainNetGalVar1,902 chainNetHg19,26 chainNetHg19,73 chainNetHg19,148 chainNetHg19,218 chainNetHg19,230 chainNetHg19,324 chainNetHg19,335 chainNetHg19,340 chainNetHg19,352 chainNetHg19,358 chainNetHg19,381 chainNetHg19,462 chainNetHg19,476 chainNetHg19,560 chainNetHg19,663 chainNetHg19,799 chainNetHg19,811 chainNetHg19,851 chainNetHg19,874 chainNetHg19,884 chainNetMm10,25 chainNetMm10,72 chainNetMm10,147 chainNetMm10,217 chainNetMm10,229 chainNetMm10,323 chainNetMm10,334 chainNetMm10,339 chainNetMm10,351 chainNetMm10,357 chainNetMm10,380 chainNetMm10,461 chainNetMm10,475 chainNetMm10,559 chainNetMm10,662 chainNetMm10,798 chainNetMm10,810 chainNetMm10,850 chainNetMm10,873 chainNetMm10,883 chainNetMm39,26 chainNetMm39,73 chainNetMm39,148 chainNetMm39,218 chainNetMm39,230 chainNetMm39,324 chainNetMm39,335 chainNetMm39,340 chainNetMm39,352 chainNetMm39,358 chainNetMm39,381 chainNetMm39,462 chainNetMm39,476 chainNetMm39,560 chainNetMm39,663 chainNetMm39,799 chainNetMm39,811 chainNetMm39,851 chainNetMm39,874 chainNetMm39,884 chainNetMonDom4,26 chainNetMonDom4,73 chainNetMonDom4,148 chainNetMonDom4,218 chainNetMonDom4,230 chainNetMonDom4,324 chainNetMonDom4,335 chainNetMonDom4,340 chainNetMonDom4,352 chainNetMonDom4,358 chainNetMonDom4,381 chainNetMonDom4,462 chainNetMonDom4,476 chainNetMonDom4,560 chainNetMonDom4,663 chainNetMonDom4,799 chainNetMonDom4,811 chainNetMonDom4,851 chainNetMonDom4,874 chainNetMonDom4,884 chainNetOryCun2,26 chainNetOryCun2,73 chainNetOryCun2,148 chainNetOryCun2,218 chainNetOryCun2,230 chainNetOryCun2,324 chainNetOryCun2,335 chainNetOryCun2,340 chainNetOryCun2,352 chainNetOryCun2,358 chainNetOryCun2,381 chainNetOryCun2,462 chainNetOryCun2,476 chainNetOryCun2,560 chainNetOryCun2,663 chainNetOryCun2,799 chainNetOryCun2,811 chainNetOryCun2,851 chainNetOryCun2,874 chainNetOryCun2,884 chainNetRn6,27 chainNetRn6,75 chainNetRn6,150 chainNetRn6,220 chainNetRn6,232 chainNetRn6,327 chainNetRn6,338 chainNetRn6,343 chainNetRn6,355 chainNetRn6,361 chainNetRn6,384 chainNetRn6,465 chainNetRn6,479 chainNetRn6,563 chainNetRn6,666 chainNetRn6,802 chainNetRn6,814 chainNetRn6,854 chainNetRn6,877 chainNetRn6,887 chainOryCun2,23 chainOryCun2,70 chainOryCun2,145 chainOryCun2,215 chainOryCun2,227 chainOryCun2,321 chainOryCun2,332 chainOryCun2,337 chainOryCun2,349 chainOryCun2,355 chainOryCun2,378 chainOryCun2,459 chainOryCun2,473 chainOryCun2,557 chainOryCun2,660 chainOryCun2,796 chainOryCun2,808 chainOryCun2,848 chainOryCun2,871 chainOryCun2,881 chainRn6,24 chainRn6,72 chainRn6,147 chainRn6,217 chainRn6,229 chainRn6,324 chainRn6,335 chainRn6,340 chainRn6,352 chainRn6,358 chainRn6,381 chainRn6,462 chainRn6,476 chainRn6,560 chainRn6,663 chainRn6,799 chainRn6,811 chainRn6,851 chainRn6,874 chainRn6,884 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 ensGene,43 ensGene,149 est,97 est,124 est,161 est,165 est,180 est,187 est,191 est,209 est,229 est,236 est,335 est,384 est,394 est,418 est,439 est,448 est,517 est,582 est,642 est,737 gc5Base,48 genscan,95 genscan,105 genscan,114 genscan,145 genscan,171 gold,122 intronEst,57 intronEst,178 intronEst,205 intronEst,242 intronEst,246 intronEst,261 intronEst,268 intronEst,272 intronEst,290 intronEst,310 intronEst,317 intronEst,416 intronEst,465 intronEst,475 intronEst,499 intronEst,520 intronEst,529 intronEst,598 intronEst,663 intronEst,723 intronEst,821 microsat,18 microsat,38 microsat,121 mrna,70 mrna,107 mrna,111 mrna,126 mrna,133 mrna,137 mrna,155 mrna,175 mrna,182 mrna,281 mrna,330 mrna,340 mrna,355 mrna,378 mrna,454 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netGalGal3,24 netGalGal3,72 netGalGal3,147 netGalGal3,217 netGalGal3,229 netGalGal3,324 netGalGal3,335 netGalGal3,340 netGalGal3,352 netGalGal3,358 netGalGal3,381 netGalGal3,462 netGalGal3,476 netGalGal3,560 netGalGal3,663 netGalGal3,799 netGalGal3,811 netGalGal3,851 netGalGal3,874 netGalGal3,884 netGalVar1,27 netGalVar1,76 netGalVar1,153 netGalVar1,225 netGalVar1,237 netGalVar1,335 netGalVar1,346 netGalVar1,351 netGalVar1,363 netGalVar1,369 netGalVar1,392 netGalVar1,473 netGalVar1,487 netGalVar1,571 netGalVar1,678 netGalVar1,814 netGalVar1,826 netGalVar1,866 netGalVar1,889 netGalVar1,899 netHg19,23 netHg19,70 netHg19,145 netHg19,215 netHg19,227 netHg19,321 netHg19,332 netHg19,337 netHg19,349 netHg19,355 netHg19,378 netHg19,459 netHg19,473 netHg19,557 netHg19,660 netHg19,796 netHg19,808 netHg19,848 netHg19,871 netHg19,881 netMm10,23 netMm10,70 netMm10,145 netMm10,215 netMm10,227 netMm10,321 netMm10,332 netMm10,337 netMm10,349 netMm10,355 netMm10,378 netMm10,459 netMm10,473 netMm10,557 netMm10,660 netMm10,796 netMm10,808 netMm10,848 netMm10,871 netMm10,881 netMm39,23 netMm39,70 netMm39,145 netMm39,215 netMm39,227 netMm39,321 netMm39,332 netMm39,337 netMm39,349 netMm39,355 netMm39,378 netMm39,459 netMm39,473 netMm39,557 netMm39,660 netMm39,796 netMm39,808 netMm39,848 netMm39,871 netMm39,881 netMonDom4,23 netMonDom4,70 netMonDom4,145 netMonDom4,215 netMonDom4,227 netMonDom4,321 netMonDom4,332 netMonDom4,337 netMonDom4,349 netMonDom4,355 netMonDom4,378 netMonDom4,459 netMonDom4,473 netMonDom4,557 netMonDom4,660 netMonDom4,796 netMonDom4,808 netMonDom4,848 netMonDom4,871 netMonDom4,881 netOryCun2,23 netOryCun2,70 netOryCun2,145 netOryCun2,215 netOryCun2,227 netOryCun2,321 netOryCun2,332 netOryCun2,337 netOryCun2,349 netOryCun2,355 netOryCun2,378 netOryCun2,459 netOryCun2,473 netOryCun2,557 netOryCun2,660 netOryCun2,796 netOryCun2,808 netOryCun2,848 netOryCun2,871 netOryCun2,881 netRn6,24 netRn6,72 netRn6,147 netRn6,217 netRn6,229 netRn6,324 netRn6,335 netRn6,340 netRn6,352 netRn6,358 netRn6,381 netRn6,462 netRn6,476 netRn6,560 netRn6,663 netRn6,799 netRn6,811 netRn6,851 netRn6,874 netRn6,884 nscanGene,55 nscanGene,68 nscanGene,122 nscanGene,137 nscanGene,166 nscanGene,170 nscanGene,183 nscanGene,198 nscanGene,214 nscanGene,227 nscanGene,250 nscanGene,277 quality,44 quality,64 refGene,56 refGene,154 refGene,190 refGene,197 refGene,221 refGene,247 refSeqComposite,55 refSeqComposite,115 refSeqComposite,156 refSeqComposite,168 refSeqComposite,174 refSeqComposite,306 refSeqComposite,309 refSeqComposite,324 refSeqComposite,368 refSeqComposite,440 refSeqComposite,496 refSeqComposite,679 refSeqComposite,704 refSeqComposite,743 refSeqComposite,756 refSeqComposite,778 refSeqComposite,827 refSeqComposite,834 refSeqComposite,858 refSeqComposite,905 refSeqComposite,911 refSeqComposite,919 refSeqComposite,925 refSeqComposite,938 refSeqComposite,980 refSeqComposite,1029 refSeqComposite,1062 refSeqComposite,1098 refSeqComposite,1109 refSeqComposite,1175 refSeqComposite,1442 refSeqComposite,1536 refSeqComposite,1589 refSeqComposite,1688 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 tRNAs,44 tRNAs,66 tRNAs,127 tRNAs,170 tRNAs,219 tRNAs,251 transMapEnsemblV5,112 transMapEnsemblV5,122 transMapEnsemblV5,178 transMapEnsemblV5,201 transMapEnsemblV5,260 transMapEnsemblV5,293 transMapEnsemblV5,301 transMapEnsemblV5,318 transMapEnsemblV5,332 transMapEnsemblV5,345 transMapEnsemblV5,384 transMapEnsemblV5,429 transMapEnsemblV5,439 transMapEnsemblV5,472 transMapEnsemblV5,478 transMapEnsemblV5,491 transMapEnsemblV5,651 transMapEnsemblV5,693 transMapEnsemblV5,772 transMapEstV5,81 transMapEstV5,91 transMapEstV5,147 transMapEstV5,170 transMapEstV5,229 transMapEstV5,262 transMapEstV5,270 transMapEstV5,287 transMapEstV5,301 transMapEstV5,314 transMapEstV5,353 transMapEstV5,398 transMapEstV5,408 transMapEstV5,441 transMapEstV5,447 transMapEstV5,460 transMapEstV5,620 transMapEstV5,662 transMapEstV5,741 transMapRefSeqV5,81 transMapRefSeqV5,91 transMapRefSeqV5,147 transMapRefSeqV5,170 transMapRefSeqV5,229 transMapRefSeqV5,262 transMapRefSeqV5,270 transMapRefSeqV5,287 transMapRefSeqV5,301 transMapRefSeqV5,314 transMapRefSeqV5,353 transMapRefSeqV5,398 transMapRefSeqV5,408 transMapRefSeqV5,441 transMapRefSeqV5,447 transMapRefSeqV5,460 transMapRefSeqV5,620 transMapRefSeqV5,662 transMapRefSeqV5,741 transMapRnaV5,81 transMapRnaV5,91 transMapRnaV5,147 transMapRnaV5,170 transMapRnaV5,229 transMapRnaV5,262 transMapRnaV5,270 transMapRnaV5,287 transMapRnaV5,301 transMapRnaV5,314 transMapRnaV5,353 transMapRnaV5,398 transMapRnaV5,408 transMapRnaV5,441 transMapRnaV5,447 transMapRnaV5,460 transMapRnaV5,620 transMapRnaV5,662 transMapRnaV5,741 transMapV5,80 transMapV5,90 transMapV5,121 transMapV5,132 transMapV5,155 transMapV5,187 transMapV5,197 transMapV5,253 transMapV5,276 transMapV5,335 transMapV5,368 transMapV5,376 transMapV5,393 transMapV5,407 transMapV5,420 transMapV5,459 transMapV5,504 transMapV5,514 transMapV5,547 transMapV5,553 transMapV5,566 transMapV5,726 transMapV5,768 transMapV5,847 ucscToRefSeq,17 unipAliSwissprot,8 unipAliTrembl,8 uniprot,27 uniprot,86 uniprot,101 uniprot,118 uniprot,201 uniprot,214 uniprot,226 uniprot,245 uniprot,492 uniprot,525 uniprot,552 uniprot,559 uniprot,658 uniprot,682 uniprot,764 uniprot,784 uniprot,801 uniprot,849 uniprot,917 uniprot,920 uniprot,955 uniprot,974 uniprot,1008 uniprot,1088 uniprot,1196 uniprot,1215 uniprot,1220 uniprot,1247 uniprot,1285 uniprot,1336 uniprot,1356 uniprot,1369 uniprot,1405 uniprot,1413 uniprot,1460 uniprot,1473 uniprot,1478 uniprot,1493 uniprot,1518 uniprot,1551 uniprot,1676 uniprot,1761 uniprot,1802 uniprot,1828 uniprot,1846 uniprot,1851 uniprot,1856 uniprot,1884 uniprot,1890 uniprot,1975 windowmaskerSdust,47 xenoMrna,89 xenoMrna,144 xenoMrna,181 xenoMrna,185 xenoMrna,200 xenoMrna,207 xenoMrna,211 xenoMrna,229 xenoMrna,249 xenoMrna,256 xenoMrna,355 xenoMrna,404 xenoMrna,414 xenoMrna,429 xenoMrna,452 xenoMrna,528 xenoRefGene,115 xenoRefGene,151 xenoRefGene,158 xenoRefGene,182 xenoRefGene,208 toga HLTOGAannotvHg38v1,1 HLTOGAannotvHg38v1,4 HLTOGAannotvHg38v1,16 HLTOGAannotvHg38v1,44 HLTOGAannotvHg38v1,72 HLTOGAannotvHg38v1,326 HLTOGAannotvHg38v1,333 together blastHg18KG,89 chainGalGal3,127 chainGalVar1,133 chainHg19,125 chainMm10,125 chainMm39,125 chainMonDom4,125 chainNetGalGal3,130 chainNetGalVar1,136 chainNetHg19,128 chainNetMm10,127 chainNetMm39,128 chainNetMonDom4,128 chainNetOryCun2,128 chainNetRn6,130 chainOryCun2,125 chainRn6,127 netGalGal3,127 netGalVar1,133 netHg19,125 netMm10,125 netMm39,125 netMonDom4,125 netOryCun2,125 netRn6,127 tolerate chainGalGal3,95 chainGalVar1,99 chainHg19,93 chainMm10,93 chainMm39,93 chainMonDom4,93 chainNetGalGal3,98 chainNetGalVar1,102 chainNetHg19,96 chainNetMm10,95 chainNetMm39,96 chainNetMonDom4,96 chainNetOryCun2,96 chainNetRn6,98 chainOryCun2,93 chainRn6,95 netGalGal3,95 netGalVar1,99 netHg19,93 netMm10,93 netMm39,93 netMonDom4,93 netOryCun2,93 netRn6,95 tolerated uniprot,1257 too refSeqComposite,936 tool HLTOGAannotvHg38v1,17 blastHg18KG,147 blastHg18KG,169 est,807 intronEst,891 mrna,524 refGene,348 refSeqComposite,1509 refSeqComposite,1738 transMapEnsemblV5,615 transMapEnsemblV5,646 transMapEstV5,584 transMapEstV5,615 transMapRefSeqV5,584 transMapRefSeqV5,615 transMapRnaV5,584 transMapRnaV5,615 transMapV5,690 transMapV5,721 uniprot,1766 uniprot,1797 windowmaskerSdust,24 xenoMrna,598 xenoRefGene,308 toolkit windowmaskerSdust,31 windowmaskerSdust,38 tools nestedRepeats,314 rmsk,337 uniprot,1873 top chainGalGal3,517 chainGalVar1,528 chainHg19,514 chainMm10,514 chainMm39,514 chainMonDom4,514 chainNetGalGal3,520 chainNetGalVar1,531 chainNetHg19,517 chainNetMm10,516 chainNetMm39,517 chainNetMonDom4,517 chainNetOryCun2,517 chainNetRn6,520 chainOryCun2,514 chainRn6,517 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netGalGal3,517 netGalVar1,528 netHg19,514 netMm10,514 netMm39,514 netMonDom4,514 netOryCun2,514 netRn6,517 refGene,134 refSeqComposite,737 uniprot,1304 uniprot,1340 uniprot,1489 xenoRefGene,95 top-level chainGalGal3,392 chainGalGal3,412 chainGalVar1,403 chainGalVar1,423 chainHg19,389 chainHg19,409 chainMm10,389 chainMm10,409 chainMm39,389 chainMm39,409 chainMonDom4,389 chainMonDom4,409 chainNetGalGal3,395 chainNetGalGal3,415 chainNetGalVar1,406 chainNetGalVar1,426 chainNetHg19,392 chainNetHg19,412 chainNetMm10,391 chainNetMm10,411 chainNetMm39,392 chainNetMm39,412 chainNetMonDom4,392 chainNetMonDom4,412 chainNetOryCun2,392 chainNetOryCun2,412 chainNetRn6,395 chainNetRn6,415 chainOryCun2,389 chainOryCun2,409 chainRn6,392 chainRn6,412 netGalGal3,392 netGalGal3,412 netGalVar1,403 netGalVar1,423 netHg19,389 netHg19,409 netMm10,389 netMm10,409 netMm39,389 netMm39,409 netMonDom4,389 netMonDom4,409 netOryCun2,389 netOryCun2,409 netRn6,392 netRn6,412 top-scoring uniprot,792 topological uniprot,330 town nscanGene,310 track augustusGene,14 augustusGene,107 blastHg18KG,15 blastHg18KG,34 blastHg18KG,45 blastHg18KG,192 chainGalGal3,15 chainGalGal3,59 chainGalGal3,62 chainGalGal3,123 chainGalGal3,265 chainGalGal3,268 chainGalGal3,319 chainGalGal3,354 chainGalGal3,386 chainGalGal3,573 chainGalGal3,702 chainGalGal3,765 chainGalVar1,18 chainGalVar1,62 chainGalVar1,65 chainGalVar1,129 chainGalVar1,273 chainGalVar1,276 chainGalVar1,330 chainGalVar1,365 chainGalVar1,397 chainGalVar1,584 chainGalVar1,717 chainGalVar1,780 chainHg19,14 chainHg19,58 chainHg19,61 chainHg19,121 chainHg19,263 chainHg19,266 chainHg19,316 chainHg19,351 chainHg19,383 chainHg19,570 chainHg19,699 chainHg19,762 chainMm10,14 chainMm10,58 chainMm10,61 chainMm10,121 chainMm10,263 chainMm10,266 chainMm10,316 chainMm10,351 chainMm10,383 chainMm10,570 chainMm10,699 chainMm10,762 chainMm39,14 chainMm39,58 chainMm39,61 chainMm39,121 chainMm39,263 chainMm39,266 chainMm39,316 chainMm39,351 chainMm39,383 chainMm39,570 chainMm39,699 chainMm39,762 chainMonDom4,14 chainMonDom4,58 chainMonDom4,61 chainMonDom4,121 chainMonDom4,263 chainMonDom4,266 chainMonDom4,316 chainMonDom4,351 chainMonDom4,383 chainMonDom4,570 chainMonDom4,699 chainMonDom4,762 chainNetGalGal3,18 chainNetGalGal3,62 chainNetGalGal3,65 chainNetGalGal3,126 chainNetGalGal3,268 chainNetGalGal3,271 chainNetGalGal3,322 chainNetGalGal3,357 chainNetGalGal3,389 chainNetGalGal3,576 chainNetGalGal3,705 chainNetGalGal3,768 chainNetGalVar1,21 chainNetGalVar1,65 chainNetGalVar1,68 chainNetGalVar1,132 chainNetGalVar1,276 chainNetGalVar1,279 chainNetGalVar1,333 chainNetGalVar1,368 chainNetGalVar1,400 chainNetGalVar1,587 chainNetGalVar1,720 chainNetGalVar1,783 chainNetHg19,17 chainNetHg19,61 chainNetHg19,64 chainNetHg19,124 chainNetHg19,266 chainNetHg19,269 chainNetHg19,319 chainNetHg19,354 chainNetHg19,386 chainNetHg19,573 chainNetHg19,702 chainNetHg19,765 chainNetMm10,16 chainNetMm10,60 chainNetMm10,63 chainNetMm10,123 chainNetMm10,265 chainNetMm10,268 chainNetMm10,318 chainNetMm10,353 chainNetMm10,385 chainNetMm10,572 chainNetMm10,701 chainNetMm10,764 chainNetMm39,17 chainNetMm39,61 chainNetMm39,64 chainNetMm39,124 chainNetMm39,266 chainNetMm39,269 chainNetMm39,319 chainNetMm39,354 chainNetMm39,386 chainNetMm39,573 chainNetMm39,702 chainNetMm39,765 chainNetMonDom4,17 chainNetMonDom4,61 chainNetMonDom4,64 chainNetMonDom4,124 chainNetMonDom4,266 chainNetMonDom4,269 chainNetMonDom4,319 chainNetMonDom4,354 chainNetMonDom4,386 chainNetMonDom4,573 chainNetMonDom4,702 chainNetMonDom4,765 chainNetOryCun2,17 chainNetOryCun2,61 chainNetOryCun2,64 chainNetOryCun2,124 chainNetOryCun2,266 chainNetOryCun2,269 chainNetOryCun2,319 chainNetOryCun2,354 chainNetOryCun2,386 chainNetOryCun2,573 chainNetOryCun2,702 chainNetOryCun2,765 chainNetRn6,18 chainNetRn6,62 chainNetRn6,65 chainNetRn6,126 chainNetRn6,268 chainNetRn6,271 chainNetRn6,322 chainNetRn6,357 chainNetRn6,389 chainNetRn6,576 chainNetRn6,705 chainNetRn6,768 chainOryCun2,14 chainOryCun2,58 chainOryCun2,61 chainOryCun2,121 chainOryCun2,263 chainOryCun2,266 chainOryCun2,316 chainOryCun2,351 chainOryCun2,383 chainOryCun2,570 chainOryCun2,699 chainOryCun2,762 chainRn6,15 chainRn6,59 chainRn6,62 chainRn6,123 chainRn6,265 chainRn6,268 chainRn6,319 chainRn6,354 chainRn6,386 chainRn6,573 chainRn6,702 chainRn6,765 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ensGene,136 est,14 est,51 est,116 est,141 est,153 est,379 est,645 est,727 gap,9 gap,43 gc5Base,15 gc5Base,39 genscan,12 genscan,66 genscan,76 genscan,87 gold,10 gold,61 gold,130 intronEst,15 intronEst,129 intronEst,135 intronEst,197 intronEst,222 intronEst,234 intronEst,460 intronEst,726 intronEst,808 intronEst,811 microsat,12 microsat,51 microsat,59 microsat,87 mrna,15 mrna,32 mrna,62 mrna,87 mrna,99 mrna,325 mrna,444 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netGalGal3,15 netGalGal3,59 netGalGal3,62 netGalGal3,123 netGalGal3,265 netGalGal3,268 netGalGal3,319 netGalGal3,354 netGalGal3,386 netGalGal3,573 netGalGal3,702 netGalGal3,765 netGalVar1,18 netGalVar1,62 netGalVar1,65 netGalVar1,129 netGalVar1,273 netGalVar1,276 netGalVar1,330 netGalVar1,365 netGalVar1,397 netGalVar1,584 netGalVar1,717 netGalVar1,780 netHg19,14 netHg19,58 netHg19,61 netHg19,121 netHg19,263 netHg19,266 netHg19,316 netHg19,351 netHg19,383 netHg19,570 netHg19,699 netHg19,762 netMm10,14 netMm10,58 netMm10,61 netMm10,121 netMm10,263 netMm10,266 netMm10,316 netMm10,351 netMm10,383 netMm10,570 netMm10,699 netMm10,762 netMm39,14 netMm39,58 netMm39,61 netMm39,121 netMm39,263 netMm39,266 netMm39,316 netMm39,351 netMm39,383 netMm39,570 netMm39,699 netMm39,762 netMonDom4,14 netMonDom4,58 netMonDom4,61 netMonDom4,121 netMonDom4,263 netMonDom4,266 netMonDom4,316 netMonDom4,351 netMonDom4,383 netMonDom4,570 netMonDom4,699 netMonDom4,762 netOryCun2,14 netOryCun2,58 netOryCun2,61 netOryCun2,121 netOryCun2,263 netOryCun2,266 netOryCun2,316 netOryCun2,351 netOryCun2,383 netOryCun2,570 netOryCun2,699 netOryCun2,762 netRn6,15 netRn6,59 netRn6,62 netRn6,123 netRn6,265 netRn6,268 netRn6,319 netRn6,354 netRn6,386 netRn6,573 netRn6,702 netRn6,765 nscanGene,11 nscanGene,187 quality,15 quality,34 quality,55 refGene,19 refGene,41 refGene,87 refGene,125 refGene,137 refGene,180 refGene,209 refGene,321 refSeqComposite,17 refSeqComposite,46 refSeqComposite,146 refSeqComposite,150 refSeqComposite,312 refSeqComposite,316 refSeqComposite,329 refSeqComposite,336 refSeqComposite,473 refSeqComposite,502 refSeqComposite,512 refSeqComposite,566 refSeqComposite,727 refSeqComposite,740 refSeqComposite,758 refSeqComposite,817 refSeqComposite,846 refSeqComposite,871 refSeqComposite,1201 refSeqComposite,1216 refSeqComposite,1341 refSeqComposite,1713 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 tRNAs,15 transMapEnsemblV5,16 transMapEnsemblV5,97 transMapEnsemblV5,107 transMapEnsemblV5,233 transMapEnsemblV5,572 transMapEnsemblV5,576 transMapEnsemblV5,678 transMapEstV5,14 transMapEstV5,66 transMapEstV5,76 transMapEstV5,202 transMapEstV5,541 transMapEstV5,545 transMapEstV5,647 transMapRefSeqV5,15 transMapRefSeqV5,66 transMapRefSeqV5,76 transMapRefSeqV5,202 transMapRefSeqV5,541 transMapRefSeqV5,545 transMapRefSeqV5,647 transMapRnaV5,15 transMapRnaV5,66 transMapRnaV5,76 transMapRnaV5,202 transMapRnaV5,541 transMapRnaV5,545 transMapRnaV5,647 transMapV5,102 transMapV5,172 transMapV5,182 transMapV5,308 transMapV5,647 transMapV5,651 transMapV5,753 ucscToRefSeq,10 ucscToRefSeq,41 uniprot,13 uniprot,104 uniprot,150 uniprot,219 uniprot,221 uniprot,234 uniprot,422 uniprot,429 uniprot,576 uniprot,654 uniprot,710 uniprot,1004 uniprot,1208 uniprot,1277 uniprot,1554 uniprot,1563 uniprot,1583 uniprot,1658 uniprot,1671 uniprot,1689 uniprot,1713 uniprot,1754 uniprot,1940 windowmaskerSdust,14 windowmaskerSdust,50 windowmaskerSdust,88 xenoMrna,13 xenoMrna,36 xenoMrna,66 xenoMrna,136 xenoMrna,161 xenoMrna,173 xenoMrna,399 xenoMrna,518 xenoRefGene,13 xenoRefGene,39 xenoRefGene,48 xenoRefGene,86 xenoRefGene,98 xenoRefGene,141 xenoRefGene,170 xenoRefGene,282 tracks augustusGene,41 chainGalGal3,779 chainGalVar1,794 chainHg19,776 chainMm10,776 chainMm39,776 chainMonDom4,776 chainNetGalGal3,782 chainNetGalVar1,797 chainNetHg19,779 chainNetMm10,778 chainNetMm39,779 chainNetMonDom4,779 chainNetOryCun2,779 chainNetRn6,782 chainOryCun2,776 chainRn6,779 ensGene,24 est,59 est,424 genscan,56 genscan,74 intronEst,143 intronEst,505 mrna,40 mrna,363 netGalGal3,779 netGalVar1,794 netHg19,776 netMm10,776 netMm39,776 netMonDom4,776 netOryCun2,776 netRn6,779 nscanGene,195 nscanGene,201 refGene,77 refGene,95 refSeqComposite,100 refSeqComposite,136 refSeqComposite,170 refSeqComposite,405 refSeqComposite,456 refSeqComposite,597 refSeqComposite,605 refSeqComposite,1141 refSeqComposite,1151 refSeqComposite,1227 refSeqComposite,1297 refSeqComposite,1376 refSeqComposite,1477 refSeqComposite,1584 refSeqComposite,1677 refSeqComposite,1702 transMapEnsemblV5,105 transMapEnsemblV5,525 transMapEnsemblV5,586 transMapEstV5,74 transMapEstV5,494 transMapEstV5,555 transMapRefSeqV5,74 transMapRefSeqV5,494 transMapRefSeqV5,555 transMapRnaV5,74 transMapRnaV5,494 transMapRnaV5,555 transMapV5,13 transMapV5,180 transMapV5,600 transMapV5,661 uniprot,91 uniprot,123 uniprot,206 uniprot,409 uniprot,1643 xenoMrna,44 xenoMrna,437 xenoRefGene,56 traditional chainGalGal3,87 chainGalVar1,91 chainHg19,85 chainMm10,85 chainMm39,85 chainMonDom4,85 chainNetGalGal3,90 chainNetGalVar1,94 chainNetHg19,88 chainNetMm10,87 chainNetMm39,88 chainNetMonDom4,88 chainNetOryCun2,88 chainNetRn6,90 chainOryCun2,85 chainRn6,87 netGalGal3,87 netGalVar1,91 netHg19,85 netMm10,85 netMm39,85 netMonDom4,85 netOryCun2,85 netRn6,87 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 transcribed est,44 est,459 intronEst,55 intronEst,540 refSeqComposite,431 transcript HLTOGAannotvHg38v1,118 HLTOGAannotvHg38v1,134 HLTOGAannotvHg38v1,258 HLTOGAannotvHg38v1,286 HLTOGAannotvHg38v1,297 est,554 intronEst,635 nscanGene,321 refSeqComposite,536 refSeqComposite,886 refSeqComposite,914 refSeqComposite,922 refSeqComposite,993 refSeqComposite,1036 refSeqComposite,1057 refSeqComposite,1122 refSeqComposite,1132 transMapEnsemblV5,154 transMapEnsemblV5,326 transMapEnsemblV5,380 transMapEstV5,123 transMapEstV5,295 transMapEstV5,349 transMapRefSeqV5,123 transMapRefSeqV5,295 transMapRefSeqV5,349 transMapRnaV5,123 transMapRnaV5,295 transMapRnaV5,349 transMapV5,229 transMapV5,401 transMapV5,455 uniprot,837 uniprot,908 uniprot,918 uniprot,945 uniprot,963 uniprot,1003 uniprot,1076 uniprot,1223 uniprot,1237 uniprot,1249 uniprot,1263 uniprot,1268 uniprot,1291 uniprot,1325 uniprot,1596 uniprot,1610 uniprot,1623 transcript-genome uniprot,813 uniprot,1619 transcript-to-genome uniprot,806 transcriptase est,510 intronEst,591 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 est,101 est,493 est,540 est,562 intronEst,182 intronEst,574 intronEst,621 intronEst,643 transcriptional genscan,28 tRNAs,497 transcripts HLTOGAannotvHg38v1,159 HLTOGAannotvHg38v1,188 HLTOGAannotvHg38v1,262 augustusGene,124 ncbiRefSeqGenomicDiff,7 refGene,419 refSeqComposite,256 refSeqComposite,323 refSeqComposite,472 refSeqComposite,524 refSeqComposite,557 refSeqComposite,1809 transMapEnsemblV5,344 transMapEstV5,313 transMapRefSeqV5,313 transMapRnaV5,313 transMapV5,419 uniprot,786 uniprot,833 uniprot,928 uniprot,936 uniprot,957 uniprot,985 uniprot,992 uniprot,1011 uniprot,1022 uniprot,1032 uniprot,1056 uniprot,1069 uniprot,1091 uniprot,1096 uniprot,1108 uniprot,1127 uniprot,1168 uniprot,1338 uniprot,1474 xenoRefGene,379 transfer tRNAs,3 tRNAs,374 tRNAs,451 translated transMapV5,156 xenoMrna,15 xenoMrna,81 xenoMrna,101 xenoMrna,471 translation augustusGene,57 tRNAs,159 tRNAs,195 translational genscan,29 transmap nscanGene,194 transMapEnsemblV5,1 transMapEnsemblV5,3 transMapEnsemblV5,25 transMapEnsemblV5,443 transMapEnsemblV5,502 transMapEnsemblV5,591 transMapEnsemblV5,594 transMapEnsemblV5,597 transMapEnsemblV5,600 transMapEnsemblV5,666 transMapEstV5,1 transMapEstV5,3 transMapEstV5,23 transMapEstV5,412 transMapEstV5,471 transMapEstV5,560 transMapEstV5,563 transMapEstV5,566 transMapEstV5,569 transMapEstV5,635 transMapRefSeqV5,1 transMapRefSeqV5,3 transMapRefSeqV5,23 transMapRefSeqV5,412 transMapRefSeqV5,471 transMapRefSeqV5,560 transMapRefSeqV5,563 transMapRefSeqV5,566 transMapRefSeqV5,569 transMapRefSeqV5,635 transMapRnaV5,1 transMapRnaV5,3 transMapRnaV5,23 transMapRnaV5,412 transMapRnaV5,471 transMapRnaV5,560 transMapRnaV5,563 transMapRnaV5,566 transMapRnaV5,569 transMapRnaV5,635 transMapV5,1 transMapV5,3 transMapV5,22 transMapV5,71 transMapV5,101 transMapV5,158 transMapV5,518 transMapV5,577 transMapV5,666 transMapV5,669 transMapV5,672 transMapV5,675 transMapV5,741 transmembrane unipLocTransMemb,1 unipLocTransMemb,3 uniprot,265 uniprot,273 uniprot,515 uniprot,567 transposable nestedRepeats,379 rmsk,402 transposons chainGalGal3,574 chainGalGal3,599 chainGalGal3,909 chainGalVar1,585 chainGalVar1,612 chainGalVar1,924 chainHg19,571 chainHg19,596 chainHg19,906 chainMm10,571 chainMm10,596 chainMm10,906 chainMm39,571 chainMm39,596 chainMm39,906 chainMonDom4,571 chainMonDom4,596 chainMonDom4,906 chainNetGalGal3,577 chainNetGalGal3,602 chainNetGalGal3,912 chainNetGalVar1,588 chainNetGalVar1,615 chainNetGalVar1,927 chainNetHg19,574 chainNetHg19,599 chainNetHg19,909 chainNetMm10,573 chainNetMm10,598 chainNetMm10,908 chainNetMm39,574 chainNetMm39,599 chainNetMm39,909 chainNetMonDom4,574 chainNetMonDom4,599 chainNetMonDom4,909 chainNetOryCun2,574 chainNetOryCun2,599 chainNetOryCun2,909 chainNetRn6,577 chainNetRn6,602 chainNetRn6,912 chainOryCun2,571 chainOryCun2,596 chainOryCun2,906 chainRn6,574 chainRn6,599 chainRn6,909 netGalGal3,574 netGalGal3,599 netGalGal3,909 netGalVar1,585 netGalVar1,612 netGalVar1,924 netHg19,571 netHg19,596 netHg19,906 netMm10,571 netMm10,596 netMm10,906 netMm39,571 netMm39,596 netMm39,906 netMonDom4,571 netMonDom4,596 netMonDom4,906 netOryCun2,571 netOryCun2,596 netOryCun2,906 netRn6,574 netRn6,599 netRn6,909 treat tRNAs,279 trembl unipAliTrembl,1 unipAliTrembl,6 uniprot,4 uniprot,44 uniprot,79 uniprot,185 uniprot,192 uniprot,199 uniprot,211 uniprot,500 uniprot,604 uniprot,661 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 tried uniprot,869 trimming chainGalGal3,807 chainGalVar1,822 chainHg19,804 chainMm10,804 chainMm39,804 chainMonDom4,804 chainNetGalGal3,810 chainNetGalVar1,825 chainNetHg19,807 chainNetMm10,806 chainNetMm39,807 chainNetMonDom4,807 chainNetOryCun2,807 chainNetRn6,810 chainOryCun2,804 chainRn6,807 netGalGal3,807 netGalVar1,822 netHg19,804 netMm10,804 netMm39,804 netMonDom4,804 netOryCun2,804 netRn6,807 trna rmsk,190 tRNAs,1 tRNAs,17 tRNAs,50 tRNAs,98 tRNAs,109 tRNAs,132 tRNAs,140 tRNAs,146 tRNAs,173 tRNAs,275 tRNAs,285 tRNAs,313 tRNAs,342 tRNAs,423 tRNAs,484 trna-derived tRNAs,149 tRNAs,301 trnas tRNAs,84 tRNAs,161 tRNAs,196 tRNAs,225 trnascan tRNAs,31 trnascan-se tRNAs,8 tRNAs,22 tRNAs,24 tRNAs,115 tRNAs,330 tRNAs,444 true augustusGene,132 tRNAs,83 windowmaskerSdust,60 windowmaskerSdust,69 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn chainGalGal3,341 chainGalVar1,352 chainHg19,338 chainMm10,338 chainMm39,338 chainMonDom4,338 chainNetGalGal3,344 chainNetGalVar1,355 chainNetHg19,341 chainNetMm10,340 chainNetMm39,341 chainNetMonDom4,341 chainNetOryCun2,341 chainNetRn6,344 chainOryCun2,338 chainRn6,341 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netGalGal3,341 netGalVar1,352 netHg19,338 netMm10,338 netMm39,338 netMonDom4,338 netOryCun2,338 netRn6,341 refGene,172 refSeqComposite,809 xenoRefGene,133 turns uniprot,370 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 twinscan nscanGene,64 nscanGene,128 two chainGalGal3,915 chainGalVar1,930 chainHg19,912 chainMm10,912 chainMm39,912 chainMonDom4,912 chainNetGalGal3,918 chainNetGalVar1,933 chainNetHg19,915 chainNetMm10,914 chainNetMm39,915 chainNetMonDom4,915 chainNetOryCun2,915 chainNetRn6,918 chainOryCun2,912 chainRn6,915 netGalGal3,915 netGalVar1,930 netHg19,912 netMm10,912 netMm39,912 netMonDom4,912 netOryCun2,912 netRn6,915 transMapEnsemblV5,455 transMapEnsemblV5,492 transMapEstV5,424 transMapEstV5,461 transMapRefSeqV5,424 transMapRefSeqV5,461 transMapRnaV5,424 transMapRnaV5,461 transMapV5,530 transMapV5,567 uniprot,71 uniprot,630 uniprot,1641 xenoMrna,69 xenoMrna,106 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type est,169 est,199 gap,89 gold,134 intronEst,250 intronEst,280 mrna,115 mrna,145 uniprot,65 uniprot,271 uniprot,464 uniprot,614 xenoMrna,189 xenoMrna,219 types augustusGene,89 chainGalGal3,513 chainGalVar1,524 chainHg19,510 chainMm10,510 chainMm39,510 chainMonDom4,510 chainNetGalGal3,516 chainNetGalVar1,527 chainNetHg19,513 chainNetMm10,512 chainNetMm39,513 chainNetMonDom4,513 chainNetOryCun2,513 chainNetRn6,516 chainOryCun2,510 chainRn6,513 est,248 est,427 intronEst,329 intronEst,508 mrna,194 mrna,366 netGalGal3,513 netGalVar1,524 netHg19,510 netMm10,510 netMm39,510 netMonDom4,510 netOryCun2,510 netRn6,513 refSeqComposite,875 refSeqComposite,890 transMapEnsemblV5,139 transMapEstV5,108 transMapRefSeqV5,108 transMapRnaV5,108 transMapV5,214 uniprot,676 xenoMrna,268 xenoMrna,440 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 refSeqComposite,430 tRNAs,311 typically HLTOGAannotvHg38v1,273 cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 est,33 est,462 gc5Base,33 intronEst,44 intronEst,543 u chainGalGal3,1078 chainGalVar1,1093 chainHg19,1075 chainMm10,1075 chainMm39,1075 chainMonDom4,1075 chainNetGalGal3,1081 chainNetGalVar1,1096 chainNetHg19,1078 chainNetMm10,1077 chainNetMm39,1078 chainNetMonDom4,1078 chainNetOryCun2,1078 chainNetRn6,1081 chainOryCun2,1075 chainRn6,1078 netGalGal3,1078 netGalVar1,1093 netHg19,1075 netMm10,1075 netMm39,1075 netMonDom4,1075 netOryCun2,1075 netRn6,1078 ucsc blastHg18KG,32 blastHg18KG,43 est,731 intronEst,815 mrna,448 nestedRepeats,245 refGene,1 refGene,3 refGene,325 refSeqComposite,44 refSeqComposite,48 refSeqComposite,71 refSeqComposite,193 refSeqComposite,334 refSeqComposite,480 refSeqComposite,486 refSeqComposite,595 refSeqComposite,1155 refSeqComposite,1205 refSeqComposite,1213 refSeqComposite,1418 refSeqComposite,1603 refSeqComposite,1717 tRNAs,340 transMapEnsemblV5,35 transMapEnsemblV5,163 transMapEnsemblV5,184 transMapEnsemblV5,685 transMapEstV5,33 transMapEstV5,132 transMapEstV5,153 transMapEstV5,654 transMapRefSeqV5,33 transMapRefSeqV5,132 transMapRefSeqV5,153 transMapRefSeqV5,654 transMapRnaV5,33 transMapRnaV5,132 transMapRnaV5,153 transMapRnaV5,654 transMapV5,32 transMapV5,238 transMapV5,259 transMapV5,760 ucscToRefSeq,12 unipAliSwissprot,3 unipAliTrembl,3 uniprot,107 uniprot,190 uniprot,773 uniprot,826 uniprot,827 uniprot,844 uniprot,1206 uniprot,1275 uniprot,1668 uniprot,1947 xenoMrna,522 xenoRefGene,286 unambiguously refSeqComposite,1112 uncertain HLTOGAannotvHg38v1,235 uncheck refSeqComposite,164 undergone refGene,108 refSeqComposite,618 xenoRefGene,69 underlies genscan,142 underlying refGene,39 uniprot,1682 xenoRefGene,37 underneath chainGalGal3,843 chainGalVar1,858 chainHg19,840 chainMm10,840 chainMm39,840 chainMonDom4,840 chainNetGalGal3,846 chainNetGalVar1,861 chainNetHg19,843 chainNetMm10,842 chainNetMm39,843 chainNetMonDom4,843 chainNetOryCun2,843 chainNetRn6,846 chainOryCun2,840 chainRn6,843 netGalGal3,843 netGalVar1,858 netHg19,840 netMm10,840 netMm39,840 netMonDom4,840 netOryCun2,840 netRn6,843 unexpected uniprot,766 ungapped chainGalGal3,452 chainGalVar1,463 chainHg19,449 chainMm10,449 chainMm39,449 chainMonDom4,449 chainNetGalGal3,455 chainNetGalVar1,466 chainNetHg19,452 chainNetMm10,451 chainNetMm39,452 chainNetMonDom4,452 chainNetOryCun2,452 chainNetRn6,455 chainOryCun2,449 chainRn6,452 netGalGal3,452 netGalVar1,463 netHg19,449 netMm10,449 netMm39,449 netMonDom4,449 netOryCun2,449 netRn6,452 uniprot unipChain,2 unipConflict,3 unipDisulfBond,3 unipDomain,2 unipInterest,2 unipLocCytopl,2 unipLocExtra,2 unipLocSignal,3 unipLocTransMemb,2 unipModif,3 unipMut,2 unipOther,3 unipRepeat,2 unipStruct,2 uniprot,1 uniprot,2 uniprot,23 uniprot,30 uniprot,41 uniprot,43 uniprot,68 uniprot,152 uniprot,237 uniprot,253 uniprot,264 uniprot,275 uniprot,286 uniprot,296 uniprot,322 uniprot,332 uniprot,337 uniprot,349 uniprot,358 uniprot,371 uniprot,380 uniprot,382 uniprot,392 uniprot,413 uniprot,424 uniprot,453 uniprot,494 uniprot,529 uniprot,544 uniprot,573 uniprot,669 uniprot,714 uniprot,721 uniprot,738 uniprot,750 uniprot,779 uniprot,924 uniprot,996 uniprot,1016 uniprot,1029 uniprot,1231 uniprot,1437 uniprot,1503 uniprot,1509 uniprot,1513 uniprot,1591 uniprot,1669 uniprot,1702 uniprot,1817 uniprot,1845 uniprot,1910 uniprot,1964 uniprot,1976 uniprot,1985 uniprot,1996 uniprot-annotated uniprot,1279 unipstruct.bb uniprot,1818 uniptogenome.over.chain.gz uniprot,1896 uniprot,1912 uniprot,1934 uniptogenomelift.psl.gz uniprot,1899 unique transMapEnsemblV5,386 transMapEnsemblV5,397 transMapEnsemblV5,434 transMapEnsemblV5,445 transMapEstV5,355 transMapEstV5,366 transMapEstV5,403 transMapEstV5,414 transMapRefSeqV5,355 transMapRefSeqV5,366 transMapRefSeqV5,403 transMapRefSeqV5,414 transMapRnaV5,355 transMapRnaV5,366 transMapRnaV5,403 transMapRnaV5,414 transMapV5,461 transMapV5,472 transMapV5,509 transMapV5,520 uniprot,1600 universal uniprot,1993 university chainGalGal3,929 chainGalGal3,963 chainGalGal3,1009 chainGalGal3,1032 chainGalVar1,944 chainGalVar1,978 chainGalVar1,1024 chainGalVar1,1047 chainHg19,926 chainHg19,960 chainHg19,1006 chainHg19,1029 chainMm10,926 chainMm10,960 chainMm10,1006 chainMm10,1029 chainMm39,926 chainMm39,960 chainMm39,1006 chainMm39,1029 chainMonDom4,926 chainMonDom4,960 chainMonDom4,1006 chainMonDom4,1029 chainNetGalGal3,932 chainNetGalGal3,966 chainNetGalGal3,1012 chainNetGalGal3,1035 chainNetGalVar1,947 chainNetGalVar1,981 chainNetGalVar1,1027 chainNetGalVar1,1050 chainNetHg19,929 chainNetHg19,963 chainNetHg19,1009 chainNetHg19,1032 chainNetMm10,928 chainNetMm10,962 chainNetMm10,1008 chainNetMm10,1031 chainNetMm39,929 chainNetMm39,963 chainNetMm39,1009 chainNetMm39,1032 chainNetMonDom4,929 chainNetMonDom4,963 chainNetMonDom4,1009 chainNetMonDom4,1032 chainNetOryCun2,929 chainNetOryCun2,963 chainNetOryCun2,1009 chainNetOryCun2,1032 chainNetRn6,932 chainNetRn6,966 chainNetRn6,1012 chainNetRn6,1035 chainOryCun2,926 chainOryCun2,960 chainOryCun2,1006 chainOryCun2,1029 chainRn6,929 chainRn6,963 chainRn6,1009 chainRn6,1032 netGalGal3,929 netGalGal3,963 netGalGal3,1009 netGalGal3,1032 netGalVar1,944 netGalVar1,978 netGalVar1,1024 netGalVar1,1047 netHg19,926 netHg19,960 netHg19,1006 netHg19,1029 netMm10,926 netMm10,960 netMm10,1006 netMm10,1029 netMm39,926 netMm39,960 netMm39,1006 netMm39,1029 netMonDom4,926 netMonDom4,960 netMonDom4,1006 netMonDom4,1029 netOryCun2,926 netOryCun2,960 netOryCun2,1006 netOryCun2,1029 netRn6,929 netRn6,963 netRn6,1009 netRn6,1032 nscanGene,30 nscanGene,236 unknown rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unlikely HLTOGAannotvHg38v1,288 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainGalGal3,232 chainGalVar1,240 chainHg19,230 chainMm10,230 chainMm39,230 chainMonDom4,230 chainNetGalGal3,235 chainNetGalVar1,243 chainNetHg19,233 chainNetMm10,232 chainNetMm39,233 chainNetMonDom4,233 chainNetOryCun2,233 chainNetRn6,235 chainOryCun2,230 chainRn6,232 est,605 intronEst,686 netGalGal3,232 netGalVar1,240 netHg19,230 netMm10,230 netMm39,230 netMonDom4,230 netOryCun2,230 netRn6,232 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainGalGal3,189 chainGalVar1,197 chainHg19,187 chainMm10,187 chainMm39,187 chainMonDom4,187 chainNetGalGal3,192 chainNetGalVar1,200 chainNetHg19,190 chainNetMm10,189 chainNetMm39,190 chainNetMonDom4,190 chainNetOryCun2,190 chainNetRn6,192 chainOryCun2,187 chainRn6,189 netGalGal3,189 netGalVar1,197 netHg19,187 netMm10,187 netMm39,187 netMonDom4,187 netOryCun2,187 netRn6,189 unspliced est,8 est,634 intronEst,123 intronEst,715 unsure rmsk,263 untranscribed refSeqComposite,408 up blastHg18KG,67 gold,67 refSeqComposite,1444 refSeqComposite,1638 rmsk,146 update est,786 intronEst,870 mrna,503 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 refGene,384 refSeqComposite,1774 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoMrna,577 xenoRefGene,344 updated refGene,43 uniprot,1566 xenoRefGene,41 us uniprot,687 uniprot,1441 usa nscanGene,35 use est,166 gold,78 intronEst,247 mrna,112 refSeqComposite,36 refSeqComposite,1546 tRNAs,357 uniprot,991 uniprot,1021 uniprot,1073 uniprot,1225 xenoMrna,186 used HLTOGAannotvHg38v1,105 augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 blastHg18KG,188 chainGalGal3,301 chainGalGal3,676 chainGalGal3,707 chainGalGal3,798 chainGalGal3,850 chainGalGal3,883 chainGalVar1,313 chainGalVar1,691 chainGalVar1,722 chainGalVar1,813 chainGalVar1,865 chainGalVar1,898 chainHg19,299 chainHg19,673 chainHg19,704 chainHg19,795 chainHg19,847 chainHg19,880 chainMm10,299 chainMm10,673 chainMm10,704 chainMm10,795 chainMm10,847 chainMm10,880 chainMm39,299 chainMm39,673 chainMm39,704 chainMm39,795 chainMm39,847 chainMm39,880 chainMonDom4,299 chainMonDom4,673 chainMonDom4,704 chainMonDom4,795 chainMonDom4,847 chainMonDom4,880 chainNetGalGal3,304 chainNetGalGal3,679 chainNetGalGal3,710 chainNetGalGal3,801 chainNetGalGal3,853 chainNetGalGal3,886 chainNetGalVar1,316 chainNetGalVar1,694 chainNetGalVar1,725 chainNetGalVar1,816 chainNetGalVar1,868 chainNetGalVar1,901 chainNetHg19,302 chainNetHg19,676 chainNetHg19,707 chainNetHg19,798 chainNetHg19,850 chainNetHg19,883 chainNetMm10,301 chainNetMm10,675 chainNetMm10,706 chainNetMm10,797 chainNetMm10,849 chainNetMm10,882 chainNetMm39,302 chainNetMm39,676 chainNetMm39,707 chainNetMm39,798 chainNetMm39,850 chainNetMm39,883 chainNetMonDom4,302 chainNetMonDom4,676 chainNetMonDom4,707 chainNetMonDom4,798 chainNetMonDom4,850 chainNetMonDom4,883 chainNetOryCun2,302 chainNetOryCun2,676 chainNetOryCun2,707 chainNetOryCun2,798 chainNetOryCun2,850 chainNetOryCun2,883 chainNetRn6,304 chainNetRn6,679 chainNetRn6,710 chainNetRn6,801 chainNetRn6,853 chainNetRn6,886 chainOryCun2,299 chainOryCun2,673 chainOryCun2,704 chainOryCun2,795 chainOryCun2,847 chainOryCun2,880 chainRn6,301 chainRn6,676 chainRn6,707 chainRn6,798 chainRn6,850 chainRn6,883 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 ensGene,36 est,123 est,275 est,334 est,573 genscan,159 intronEst,204 intronEst,356 intronEst,415 intronEst,654 mrna,69 mrna,221 mrna,280 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netGalGal3,301 netGalGal3,676 netGalGal3,707 netGalGal3,798 netGalGal3,850 netGalGal3,883 netGalVar1,313 netGalVar1,691 netGalVar1,722 netGalVar1,813 netGalVar1,865 netGalVar1,898 netHg19,299 netHg19,673 netHg19,704 netHg19,795 netHg19,847 netHg19,880 netMm10,299 netMm10,673 netMm10,704 netMm10,795 netMm10,847 netMm10,880 netMm39,299 netMm39,673 netMm39,704 netMm39,795 netMm39,847 netMm39,880 netMonDom4,299 netMonDom4,673 netMonDom4,704 netMonDom4,795 netMonDom4,847 netMonDom4,880 netOryCun2,299 netOryCun2,673 netOryCun2,704 netOryCun2,795 netOryCun2,847 netOryCun2,880 netRn6,301 netRn6,676 netRn6,707 netRn6,798 netRn6,850 netRn6,883 nscanGene,197 refSeqComposite,234 refSeqComposite,244 refSeqComposite,1000 rmsk,299 rmsk,341 transMapEnsemblV5,56 transMapEnsemblV5,64 transMapEnsemblV5,187 transMapEnsemblV5,240 transMapEnsemblV5,245 transMapEnsemblV5,265 transMapEnsemblV5,285 transMapEnsemblV5,317 transMapEnsemblV5,650 transMapEstV5,156 transMapEstV5,209 transMapEstV5,214 transMapEstV5,234 transMapEstV5,254 transMapEstV5,286 transMapEstV5,619 transMapRefSeqV5,156 transMapRefSeqV5,209 transMapRefSeqV5,214 transMapRefSeqV5,234 transMapRefSeqV5,254 transMapRefSeqV5,286 transMapRefSeqV5,619 transMapRnaV5,156 transMapRnaV5,209 transMapRnaV5,214 transMapRnaV5,234 transMapRnaV5,254 transMapRnaV5,286 transMapRnaV5,619 transMapV5,70 transMapV5,262 transMapV5,315 transMapV5,320 transMapV5,340 transMapV5,360 transMapV5,392 transMapV5,725 uniprot,1062 uniprot,1087 uniprot,1118 uniprot,1198 uniprot,1210 uniprot,1319 uniprot,1351 uniprot,1550 uniprot,1626 uniprot,1801 uniprot,1883 xenoMrna,143 xenoMrna,295 xenoMrna,354 useful chainGalGal3,286 chainGalGal3,486 chainGalVar1,296 chainGalVar1,497 chainHg19,284 chainHg19,483 chainMm10,284 chainMm10,483 chainMm39,284 chainMm39,483 chainMonDom4,284 chainMonDom4,483 chainNetGalGal3,289 chainNetGalGal3,489 chainNetGalVar1,299 chainNetGalVar1,500 chainNetHg19,287 chainNetHg19,486 chainNetMm10,286 chainNetMm10,485 chainNetMm39,287 chainNetMm39,486 chainNetMonDom4,287 chainNetMonDom4,486 chainNetOryCun2,287 chainNetOryCun2,486 chainNetRn6,289 chainNetRn6,489 chainOryCun2,284 chainOryCun2,483 chainRn6,286 chainRn6,486 microsat,20 netGalGal3,286 netGalGal3,486 netGalVar1,296 netGalVar1,497 netHg19,284 netHg19,483 netMm10,284 netMm10,483 netMm39,284 netMm39,483 netMonDom4,284 netMonDom4,483 netOryCun2,284 netOryCun2,483 netRn6,286 netRn6,486 user est,393 intronEst,474 mrna,339 transMapEnsemblV5,121 transMapEstV5,90 transMapRefSeqV5,90 transMapRnaV5,90 transMapV5,196 xenoMrna,413 users refGene,189 refSeqComposite,826 uniprot,406 uniprot,684 xenoRefGene,150 uses HLTOGAannotvHg38v1,45 HLTOGAannotvHg38v1,87 nscanGene,108 rmsk,79 tRNAs,30 using HLTOGAannotvHg38v1,6 augustusGene,294 blastHg18KG,52 blastHg18KG,77 blastHg18KG,90 chainGalGal3,77 chainGalGal3,612 chainGalGal3,772 chainGalVar1,81 chainGalVar1,625 chainGalVar1,787 chainHg19,75 chainHg19,609 chainHg19,769 chainMm10,75 chainMm10,609 chainMm10,769 chainMm39,75 chainMm39,609 chainMm39,769 chainMonDom4,75 chainMonDom4,609 chainMonDom4,769 chainNetGalGal3,80 chainNetGalGal3,615 chainNetGalGal3,775 chainNetGalVar1,84 chainNetGalVar1,628 chainNetGalVar1,790 chainNetHg19,78 chainNetHg19,612 chainNetHg19,772 chainNetMm10,77 chainNetMm10,611 chainNetMm10,771 chainNetMm39,78 chainNetMm39,612 chainNetMm39,772 chainNetMonDom4,78 chainNetMonDom4,612 chainNetMonDom4,772 chainNetOryCun2,78 chainNetOryCun2,612 chainNetOryCun2,772 chainNetRn6,80 chainNetRn6,615 chainNetRn6,775 chainOryCun2,75 chainOryCun2,609 chainOryCun2,769 chainRn6,77 chainRn6,612 chainRn6,772 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 ensGene,64 est,656 gap,143 intronEst,737 microsat,90 mrna,396 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netGalGal3,77 netGalGal3,612 netGalGal3,772 netGalVar1,81 netGalVar1,625 netGalVar1,787 netHg19,75 netHg19,609 netHg19,769 netMm10,75 netMm10,609 netMm10,769 netMm39,75 netMm39,609 netMm39,769 netMonDom4,75 netMonDom4,609 netMonDom4,769 netOryCun2,75 netOryCun2,609 netOryCun2,769 netRn6,77 netRn6,612 netRn6,772 nscanGene,15 nscanGene,274 nscanGene,319 refGene,266 refSeqComposite,79 refSeqComposite,1156 refSeqComposite,1206 refSeqComposite,1219 refSeqComposite,1237 refSeqComposite,1309 refSeqComposite,1507 refSeqComposite,1592 refSeqComposite,1623 rmsk,15 rmsk,290 tRNAs,21 tRNAs,401 transMapEnsemblV5,75 transMapEnsemblV5,564 transMapEnsemblV5,613 transMapEnsemblV5,765 transMapEstV5,44 transMapEstV5,533 transMapEstV5,582 transMapEstV5,734 transMapRefSeqV5,44 transMapRefSeqV5,533 transMapRefSeqV5,582 transMapRefSeqV5,734 transMapRnaV5,44 transMapRnaV5,533 transMapRnaV5,582 transMapRnaV5,734 transMapV5,43 transMapV5,82 transMapV5,125 transMapV5,136 transMapV5,143 transMapV5,639 transMapV5,688 transMapV5,840 uniprot,217 uniprot,722 uniprot,1526 xenoMrna,470 xenoRefGene,227 ustat windowmaskerSdust,66 usually est,40 gap,150 intronEst,51 nestedRepeats,192 tRNAs,239 tRNAs,307 transMapEnsemblV5,505 transMapEstV5,474 transMapRefSeqV5,474 transMapRnaV5,474 transMapV5,580 utilities blastHg18KG,187 refSeqComposite,1530 refSeqComposite,1599 utility refSeqComposite,1595 refSeqComposite,1607 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 utr transMapV5,165 utrs nscanGene,146 v HLTOGAannotvHg38v1,343 ensGene,185 v.1.23 tRNAs,23 v3.1 augustusGene,7 v4 transMapEnsemblV5,667 transMapEstV5,636 transMapRefSeqV5,636 transMapRnaV5,636 v5 transMapV5,2 transMapV5,742 valid est,214 intronEst,295 mrna,160 xenoMrna,234 validate refGene,192 refSeqComposite,829 xenoRefGene,153 validation genscan,107 value est,285 intronEst,366 mrna,231 xenoMrna,305 van nscanGene,360 variant uniprot,2026 variants refSeqComposite,951 uniprot,357 uniprot,415 uniprot,425 uniprot,533 uniprot,943 uniprot,2042 variation microsat,7 nestedRepeats,11 refSeqComposite,1078 rmsk,6 simpleRepeat,8 uniprot,438 windowmaskerSdust,9 variety gc5Base,45 quality,61 various uniprot,50 varying gap,107 vb chainGalGal3,1036 chainGalVar1,1051 chainHg19,1033 chainMm10,1033 chainMm39,1033 chainMonDom4,1033 chainNetGalGal3,1039 chainNetGalVar1,1054 chainNetHg19,1036 chainNetMm10,1035 chainNetMm39,1036 chainNetMonDom4,1036 chainNetOryCun2,1036 chainNetRn6,1039 chainOryCun2,1033 chainRn6,1036 netGalGal3,1036 netGalVar1,1051 netHg19,1033 netMm10,1033 netMm39,1033 netMonDom4,1033 netOryCun2,1033 netRn6,1036 vector est,470 intronEst,551 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 refSeqComposite,1135 refSeqComposite,1570 rmsk,58 transMapEnsemblV5,8 transMapEstV5,6 transMapRefSeqV5,7 transMapRnaV5,7 transMapV5,5 uniprot,1254 uniprot,1297 uniprot,1576 uniprot,1593 versions augustusGene,279 ensGene,133 nestedRepeats,251 nestedRepeats,267 refSeqComposite,1342 refSeqComposite,1696 uniprot,1655 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 tRNAs,160 transMapEnsemblV5,31 transMapEnsemblV5,159 transMapEnsemblV5,192 transMapEstV5,29 transMapEstV5,128 transMapEstV5,161 transMapRefSeqV5,29 transMapRefSeqV5,128 transMapRefSeqV5,161 transMapRnaV5,29 transMapRnaV5,128 transMapRnaV5,161 transMapV5,28 transMapV5,114 transMapV5,234 transMapV5,267 xenoMrna,19 vertebrates augustusGene,209 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very est,677 intronEst,758 uniprot,977 uniprot,1185 uniprot,1399 uniprot,1402 via transMapEnsemblV5,328 transMapEstV5,297 transMapRefSeqV5,297 transMapRnaV5,297 transMapV5,403 uniprot,1293 vienna nscanGene,267 view chainGalGal3,463 chainGalVar1,474 chainHg19,460 chainMm10,460 chainMm39,460 chainMonDom4,460 chainNetGalGal3,466 chainNetGalVar1,477 chainNetHg19,463 chainNetMm10,462 chainNetMm39,463 chainNetMonDom4,463 chainNetOryCun2,463 chainNetRn6,466 chainOryCun2,460 chainRn6,463 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 est,210 intronEst,291 mrna,156 netGalGal3,463 netGalVar1,474 netHg19,460 netMm10,460 netMm39,460 netMonDom4,460 netOryCun2,460 netRn6,463 xenoMrna,230 viewed est,638 gold,70 intronEst,719 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 uniprot,147 visit refGene,46 refSeqComposite,104 vs HLTOGAannotvHg38v1,2 w blastHg18KG,158 blastHg18KG,160 chainGalGal3,1038 chainGalGal3,1058 chainGalGal3,1106 chainGalVar1,1053 chainGalVar1,1073 chainGalVar1,1121 chainHg19,1035 chainHg19,1055 chainHg19,1103 chainMm10,1035 chainMm10,1055 chainMm10,1103 chainMm39,1035 chainMm39,1055 chainMm39,1103 chainMonDom4,1035 chainMonDom4,1055 chainMonDom4,1103 chainNetGalGal3,1041 chainNetGalGal3,1061 chainNetGalGal3,1109 chainNetGalVar1,1056 chainNetGalVar1,1076 chainNetGalVar1,1124 chainNetHg19,1038 chainNetHg19,1058 chainNetHg19,1106 chainNetMm10,1037 chainNetMm10,1057 chainNetMm10,1105 chainNetMm39,1038 chainNetMm39,1058 chainNetMm39,1106 chainNetMonDom4,1038 chainNetMonDom4,1058 chainNetMonDom4,1106 chainNetOryCun2,1038 chainNetOryCun2,1058 chainNetOryCun2,1106 chainNetRn6,1041 chainNetRn6,1061 chainNetRn6,1109 chainOryCun2,1035 chainOryCun2,1055 chainOryCun2,1103 chainRn6,1038 chainRn6,1058 chainRn6,1106 gold,136 netGalGal3,1038 netGalGal3,1058 netGalGal3,1106 netGalVar1,1053 netGalVar1,1073 netGalVar1,1121 netHg19,1035 netHg19,1055 netHg19,1103 netMm10,1035 netMm10,1055 netMm10,1103 netMm39,1035 netMm39,1055 netMm39,1103 netMonDom4,1035 netMonDom4,1055 netMonDom4,1103 netOryCun2,1035 netOryCun2,1055 netOryCun2,1103 netRn6,1038 netRn6,1058 netRn6,1106 waack augustusGene,318 want uniprot,690 was HLTOGAannotvHg38v1,317 augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 blastHg18KG,180 chainGalGal3,657 chainGalGal3,675 chainGalGal3,796 chainGalGal3,841 chainGalGal3,849 chainGalGal3,869 chainGalGal3,881 chainGalGal3,906 chainGalGal3,924 chainGalGal3,959 chainGalVar1,672 chainGalVar1,690 chainGalVar1,811 chainGalVar1,856 chainGalVar1,864 chainGalVar1,884 chainGalVar1,896 chainGalVar1,921 chainGalVar1,939 chainGalVar1,974 chainHg19,654 chainHg19,672 chainHg19,793 chainHg19,838 chainHg19,846 chainHg19,866 chainHg19,878 chainHg19,903 chainHg19,921 chainHg19,956 chainMm10,654 chainMm10,672 chainMm10,793 chainMm10,838 chainMm10,846 chainMm10,866 chainMm10,878 chainMm10,903 chainMm10,921 chainMm10,956 chainMm39,654 chainMm39,672 chainMm39,793 chainMm39,838 chainMm39,846 chainMm39,866 chainMm39,878 chainMm39,903 chainMm39,921 chainMm39,956 chainMonDom4,654 chainMonDom4,672 chainMonDom4,793 chainMonDom4,838 chainMonDom4,846 chainMonDom4,866 chainMonDom4,878 chainMonDom4,903 chainMonDom4,921 chainMonDom4,956 chainNetGalGal3,660 chainNetGalGal3,678 chainNetGalGal3,799 chainNetGalGal3,844 chainNetGalGal3,852 chainNetGalGal3,872 chainNetGalGal3,884 chainNetGalGal3,909 chainNetGalGal3,927 chainNetGalGal3,962 chainNetGalVar1,675 chainNetGalVar1,693 chainNetGalVar1,814 chainNetGalVar1,859 chainNetGalVar1,867 chainNetGalVar1,887 chainNetGalVar1,899 chainNetGalVar1,924 chainNetGalVar1,942 chainNetGalVar1,977 chainNetHg19,657 chainNetHg19,675 chainNetHg19,796 chainNetHg19,841 chainNetHg19,849 chainNetHg19,869 chainNetHg19,881 chainNetHg19,906 chainNetHg19,924 chainNetHg19,959 chainNetMm10,656 chainNetMm10,674 chainNetMm10,795 chainNetMm10,840 chainNetMm10,848 chainNetMm10,868 chainNetMm10,880 chainNetMm10,905 chainNetMm10,923 chainNetMm10,958 chainNetMm39,657 chainNetMm39,675 chainNetMm39,796 chainNetMm39,841 chainNetMm39,849 chainNetMm39,869 chainNetMm39,881 chainNetMm39,906 chainNetMm39,924 chainNetMm39,959 chainNetMonDom4,657 chainNetMonDom4,675 chainNetMonDom4,796 chainNetMonDom4,841 chainNetMonDom4,849 chainNetMonDom4,869 chainNetMonDom4,881 chainNetMonDom4,906 chainNetMonDom4,924 chainNetMonDom4,959 chainNetOryCun2,657 chainNetOryCun2,675 chainNetOryCun2,796 chainNetOryCun2,841 chainNetOryCun2,849 chainNetOryCun2,869 chainNetOryCun2,881 chainNetOryCun2,906 chainNetOryCun2,924 chainNetOryCun2,959 chainNetRn6,660 chainNetRn6,678 chainNetRn6,799 chainNetRn6,844 chainNetRn6,852 chainNetRn6,872 chainNetRn6,884 chainNetRn6,909 chainNetRn6,927 chainNetRn6,962 chainOryCun2,654 chainOryCun2,672 chainOryCun2,793 chainOryCun2,838 chainOryCun2,846 chainOryCun2,866 chainOryCun2,878 chainOryCun2,903 chainOryCun2,921 chainOryCun2,956 chainRn6,657 chainRn6,675 chainRn6,796 chainRn6,841 chainRn6,849 chainRn6,869 chainRn6,881 chainRn6,906 chainRn6,924 chainRn6,959 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 est,699 est,728 intronEst,780 intronEst,812 microsat,108 mrna,415 mrna,445 netGalGal3,657 netGalGal3,675 netGalGal3,796 netGalGal3,841 netGalGal3,849 netGalGal3,869 netGalGal3,881 netGalGal3,906 netGalGal3,924 netGalGal3,959 netGalVar1,672 netGalVar1,690 netGalVar1,811 netGalVar1,856 netGalVar1,864 netGalVar1,884 netGalVar1,896 netGalVar1,921 netGalVar1,939 netGalVar1,974 netHg19,654 netHg19,672 netHg19,793 netHg19,838 netHg19,846 netHg19,866 netHg19,878 netHg19,903 netHg19,921 netHg19,956 netMm10,654 netMm10,672 netMm10,793 netMm10,838 netMm10,846 netMm10,866 netMm10,878 netMm10,903 netMm10,921 netMm10,956 netMm39,654 netMm39,672 netMm39,793 netMm39,838 netMm39,846 netMm39,866 netMm39,878 netMm39,903 netMm39,921 netMm39,956 netMonDom4,654 netMonDom4,672 netMonDom4,793 netMonDom4,838 netMonDom4,846 netMonDom4,866 netMonDom4,878 netMonDom4,903 netMonDom4,921 netMonDom4,956 netOryCun2,654 netOryCun2,672 netOryCun2,793 netOryCun2,838 netOryCun2,846 netOryCun2,866 netOryCun2,878 netOryCun2,903 netOryCun2,921 netOryCun2,956 netRn6,657 netRn6,675 netRn6,796 netRn6,841 netRn6,849 netRn6,869 netRn6,881 netRn6,906 netRn6,924 netRn6,959 nscanGene,212 refGene,293 refGene,322 refSeqComposite,503 refSeqComposite,1264 refSeqComposite,1714 rmsk,12 rmsk,262 simpleRepeat,68 transMapEnsemblV5,222 transMapEnsemblV5,239 transMapEnsemblV5,284 transMapEnsemblV5,316 transMapEnsemblV5,679 transMapEstV5,191 transMapEstV5,208 transMapEstV5,253 transMapEstV5,285 transMapEstV5,648 transMapRefSeqV5,191 transMapRefSeqV5,208 transMapRefSeqV5,253 transMapRefSeqV5,285 transMapRefSeqV5,648 transMapRnaV5,191 transMapRnaV5,208 transMapRnaV5,253 transMapRnaV5,285 transMapRnaV5,648 transMapV5,297 transMapV5,314 transMapV5,359 transMapV5,391 transMapV5,754 ucscToRefSeq,42 uniprot,799 uniprot,815 uniprot,1354 uniprot,1625 uniprot,1941 windowmaskerSdust,52 windowmaskerSdust,78 xenoMrna,488 xenoMrna,519 xenoRefGene,254 xenoRefGene,283 washington nscanGene,29 nscanGene,235 way transMapEnsemblV5,590 transMapEstV5,559 transMapRefSeqV5,559 transMapRnaV5,559 transMapV5,665 uniprot,1459 ways gc5Base,47 quality,63 refSeqComposite,1303 we ensGene,146 refSeqComposite,77 rmsk,122 uniprot,1224 uniprot,1453 uniprot,1859 weaker HLTOGAannotvHg38v1,198 webb chainGalGal3,938 chainGalGal3,975 chainGalVar1,953 chainGalVar1,990 chainHg19,935 chainHg19,972 chainMm10,935 chainMm10,972 chainMm39,935 chainMm39,972 chainMonDom4,935 chainMonDom4,972 chainNetGalGal3,941 chainNetGalGal3,978 chainNetGalVar1,956 chainNetGalVar1,993 chainNetHg19,938 chainNetHg19,975 chainNetMm10,937 chainNetMm10,974 chainNetMm39,938 chainNetMm39,975 chainNetMonDom4,938 chainNetMonDom4,975 chainNetOryCun2,938 chainNetOryCun2,975 chainNetRn6,941 chainNetRn6,978 chainOryCun2,935 chainOryCun2,972 chainRn6,938 chainRn6,975 netGalGal3,938 netGalGal3,975 netGalVar1,953 netGalVar1,990 netHg19,935 netHg19,972 netMm10,935 netMm10,972 netMm39,935 netMm39,972 netMonDom4,935 netMonDom4,972 netOryCun2,935 netOryCun2,972 netRn6,938 netRn6,975 weekly refGene,44 xenoRefGene,42 weight tRNAs,493 well augustusGene,78 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 est,542 est,565 genscan,36 intronEst,623 intronEst,646 nscanGene,78 rmsk,54 were augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 blastHg18KG,46 blastHg18KG,70 blastHg18KG,87 blastHg18KG,114 blastHg18KG,136 blastHg18KG,193 chainGalGal3,585 chainGalGal3,593 chainGalGal3,600 chainGalGal3,607 chainGalGal3,619 chainGalGal3,693 chainGalGal3,767 chainGalGal3,947 chainGalGal3,991 chainGalGal3,1005 chainGalVar1,598 chainGalVar1,606 chainGalVar1,613 chainGalVar1,620 chainGalVar1,632 chainGalVar1,708 chainGalVar1,782 chainGalVar1,962 chainGalVar1,1006 chainGalVar1,1020 chainHg19,582 chainHg19,590 chainHg19,597 chainHg19,604 chainHg19,616 chainHg19,690 chainHg19,764 chainHg19,944 chainHg19,988 chainHg19,1002 chainMm10,582 chainMm10,590 chainMm10,597 chainMm10,604 chainMm10,616 chainMm10,690 chainMm10,764 chainMm10,944 chainMm10,988 chainMm10,1002 chainMm39,582 chainMm39,590 chainMm39,597 chainMm39,604 chainMm39,616 chainMm39,690 chainMm39,764 chainMm39,944 chainMm39,988 chainMm39,1002 chainMonDom4,582 chainMonDom4,590 chainMonDom4,597 chainMonDom4,604 chainMonDom4,616 chainMonDom4,690 chainMonDom4,764 chainMonDom4,944 chainMonDom4,988 chainMonDom4,1002 chainNetGalGal3,588 chainNetGalGal3,596 chainNetGalGal3,603 chainNetGalGal3,610 chainNetGalGal3,622 chainNetGalGal3,696 chainNetGalGal3,770 chainNetGalGal3,950 chainNetGalGal3,994 chainNetGalGal3,1008 chainNetGalVar1,601 chainNetGalVar1,609 chainNetGalVar1,616 chainNetGalVar1,623 chainNetGalVar1,635 chainNetGalVar1,711 chainNetGalVar1,785 chainNetGalVar1,965 chainNetGalVar1,1009 chainNetGalVar1,1023 chainNetHg19,585 chainNetHg19,593 chainNetHg19,600 chainNetHg19,607 chainNetHg19,619 chainNetHg19,693 chainNetHg19,767 chainNetHg19,947 chainNetHg19,991 chainNetHg19,1005 chainNetMm10,584 chainNetMm10,592 chainNetMm10,599 chainNetMm10,606 chainNetMm10,618 chainNetMm10,692 chainNetMm10,766 chainNetMm10,946 chainNetMm10,990 chainNetMm10,1004 chainNetMm39,585 chainNetMm39,593 chainNetMm39,600 chainNetMm39,607 chainNetMm39,619 chainNetMm39,693 chainNetMm39,767 chainNetMm39,947 chainNetMm39,991 chainNetMm39,1005 chainNetMonDom4,585 chainNetMonDom4,593 chainNetMonDom4,600 chainNetMonDom4,607 chainNetMonDom4,619 chainNetMonDom4,693 chainNetMonDom4,767 chainNetMonDom4,947 chainNetMonDom4,991 chainNetMonDom4,1005 chainNetOryCun2,585 chainNetOryCun2,593 chainNetOryCun2,600 chainNetOryCun2,607 chainNetOryCun2,619 chainNetOryCun2,693 chainNetOryCun2,767 chainNetOryCun2,947 chainNetOryCun2,991 chainNetOryCun2,1005 chainNetRn6,588 chainNetRn6,596 chainNetRn6,603 chainNetRn6,610 chainNetRn6,622 chainNetRn6,696 chainNetRn6,770 chainNetRn6,950 chainNetRn6,994 chainNetRn6,1008 chainOryCun2,582 chainOryCun2,590 chainOryCun2,597 chainOryCun2,604 chainOryCun2,616 chainOryCun2,690 chainOryCun2,764 chainOryCun2,944 chainOryCun2,988 chainOryCun2,1002 chainRn6,585 chainRn6,593 chainRn6,600 chainRn6,607 chainRn6,619 chainRn6,693 chainRn6,767 chainRn6,947 chainRn6,991 chainRn6,1005 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 ensGene,13 est,592 est,651 est,723 gc5Base,79 gold,23 gold,30 intronEst,673 intronEst,732 mrna,391 mrna,439 netGalGal3,585 netGalGal3,593 netGalGal3,600 netGalGal3,607 netGalGal3,619 netGalGal3,693 netGalGal3,767 netGalGal3,947 netGalGal3,991 netGalGal3,1005 netGalVar1,598 netGalVar1,606 netGalVar1,613 netGalVar1,620 netGalVar1,632 netGalVar1,708 netGalVar1,782 netGalVar1,962 netGalVar1,1006 netGalVar1,1020 netHg19,582 netHg19,590 netHg19,597 netHg19,604 netHg19,616 netHg19,690 netHg19,764 netHg19,944 netHg19,988 netHg19,1002 netMm10,582 netMm10,590 netMm10,597 netMm10,604 netMm10,616 netMm10,690 netMm10,764 netMm10,944 netMm10,988 netMm10,1002 netMm39,582 netMm39,590 netMm39,597 netMm39,604 netMm39,616 netMm39,690 netMm39,764 netMm39,944 netMm39,988 netMm39,1002 netMonDom4,582 netMonDom4,590 netMonDom4,597 netMonDom4,604 netMonDom4,616 netMonDom4,690 netMonDom4,764 netMonDom4,944 netMonDom4,988 netMonDom4,1002 netOryCun2,582 netOryCun2,590 netOryCun2,597 netOryCun2,604 netOryCun2,616 netOryCun2,690 netOryCun2,764 netOryCun2,944 netOryCun2,988 netOryCun2,1002 netRn6,585 netRn6,593 netRn6,600 netRn6,607 netRn6,619 netRn6,693 netRn6,767 netRn6,947 netRn6,991 netRn6,1005 nscanGene,196 nscanGene,207 nscanGene,222 quality,89 quality,105 refGene,259 refGene,276 refGene,317 refSeqComposite,101 refSeqComposite,249 refSeqComposite,358 refSeqComposite,420 refSeqComposite,1152 refSeqComposite,1165 refSeqComposite,1230 refSeqComposite,1247 refSeqComposite,1288 tRNAs,345 transMapEnsemblV5,156 transMapEnsemblV5,186 transMapEnsemblV5,213 transMapEnsemblV5,244 transMapEnsemblV5,250 transMapEnsemblV5,264 transMapEnsemblV5,351 transMapEnsemblV5,382 transMapEnsemblV5,395 transMapEstV5,125 transMapEstV5,155 transMapEstV5,182 transMapEstV5,213 transMapEstV5,219 transMapEstV5,233 transMapEstV5,320 transMapEstV5,351 transMapEstV5,364 transMapRefSeqV5,125 transMapRefSeqV5,155 transMapRefSeqV5,182 transMapRefSeqV5,213 transMapRefSeqV5,219 transMapRefSeqV5,233 transMapRefSeqV5,320 transMapRefSeqV5,351 transMapRefSeqV5,364 transMapRnaV5,125 transMapRnaV5,155 transMapRnaV5,182 transMapRnaV5,213 transMapRnaV5,219 transMapRnaV5,233 transMapRnaV5,320 transMapRnaV5,351 transMapRnaV5,364 transMapV5,116 transMapV5,129 transMapV5,231 transMapV5,261 transMapV5,288 transMapV5,319 transMapV5,325 transMapV5,339 transMapV5,426 transMapV5,457 transMapV5,470 ucscToRefSeq,29 uniprot,782 uniprot,794 uniprot,930 uniprot,937 uniprot,1386 uniprot,1471 uniprot,1505 uniprot,1515 xenoMrna,463 xenoMrna,513 xenoRefGene,220 xenoRefGene,237 xenoRefGene,278 wget uniprot,1903 uniprot,1913 what tRNAs,112 wheeler est,783 intronEst,867 mrna,500 xenoMrna,574 when augustusGene,188 augustusGene,238 chainGalGal3,414 chainGalVar1,425 chainHg19,411 chainMm10,411 chainMm39,411 chainMonDom4,411 chainNetGalGal3,417 chainNetGalVar1,428 chainNetHg19,414 chainNetMm10,413 chainNetMm39,414 chainNetMonDom4,414 chainNetOryCun2,414 chainNetRn6,417 chainOryCun2,411 chainRn6,414 est,146 est,156 est,684 gold,27 intronEst,35 intronEst,227 intronEst,237 intronEst,765 mrna,92 mrna,102 mrna,400 netGalGal3,414 netGalVar1,425 netHg19,411 netMm10,411 netMm39,411 netMonDom4,411 netOryCun2,411 netRn6,414 quality,41 refGene,278 refSeqComposite,1092 refSeqComposite,1249 tRNAs,355 transMapEnsemblV5,468 transMapEstV5,437 transMapRefSeqV5,437 transMapRnaV5,437 transMapV5,543 uniprot,951 uniprot,1202 uniprot,1632 xenoMrna,166 xenoMrna,176 xenoMrna,473 xenoRefGene,239 where chainGalGal3,196 chainGalVar1,204 chainHg19,194 chainMm10,194 chainMm39,194 chainMonDom4,194 chainNetGalGal3,199 chainNetGalVar1,207 chainNetHg19,197 chainNetMm10,196 chainNetMm39,197 chainNetMonDom4,197 chainNetOryCun2,197 chainNetRn6,199 chainOryCun2,194 chainRn6,196 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,85 netGalGal3,196 netGalVar1,204 netHg19,194 netMm10,194 netMm39,194 netMonDom4,194 netOryCun2,194 netRn6,196 transMapEnsemblV5,272 transMapEnsemblV5,374 transMapEnsemblV5,423 transMapEnsemblV5,511 transMapEstV5,241 transMapEstV5,343 transMapEstV5,392 transMapEstV5,480 transMapRefSeqV5,241 transMapRefSeqV5,343 transMapRefSeqV5,392 transMapRefSeqV5,480 transMapRnaV5,241 transMapRnaV5,343 transMapRnaV5,392 transMapRnaV5,480 transMapV5,347 transMapV5,449 transMapV5,498 transMapV5,586 uniprot,1192 whether chainGalGal3,865 chainGalVar1,880 chainHg19,862 chainMm10,862 chainMm39,862 chainMonDom4,862 chainNetGalGal3,868 chainNetGalVar1,883 chainNetHg19,865 chainNetMm10,864 chainNetMm39,865 chainNetMonDom4,865 chainNetOryCun2,865 chainNetRn6,868 chainOryCun2,862 chainRn6,865 netGalGal3,865 netGalVar1,880 netHg19,862 netMm10,862 netMm39,862 netMonDom4,862 netOryCun2,862 netRn6,865 tRNAs,138 which augustusGene,159 augustusGene,227 chainGalGal3,331 chainGalGal3,623 chainGalGal3,830 chainGalVar1,342 chainGalVar1,636 chainGalVar1,845 chainHg19,328 chainHg19,620 chainHg19,827 chainMm10,328 chainMm10,620 chainMm10,827 chainMm39,328 chainMm39,620 chainMm39,827 chainMonDom4,328 chainMonDom4,620 chainMonDom4,827 chainNetGalGal3,334 chainNetGalGal3,626 chainNetGalGal3,833 chainNetGalVar1,345 chainNetGalVar1,639 chainNetGalVar1,848 chainNetHg19,331 chainNetHg19,623 chainNetHg19,830 chainNetMm10,330 chainNetMm10,622 chainNetMm10,829 chainNetMm39,331 chainNetMm39,623 chainNetMm39,830 chainNetMonDom4,331 chainNetMonDom4,623 chainNetMonDom4,830 chainNetOryCun2,331 chainNetOryCun2,623 chainNetOryCun2,830 chainNetRn6,334 chainNetRn6,626 chainNetRn6,833 chainOryCun2,328 chainOryCun2,620 chainOryCun2,827 chainRn6,331 chainRn6,623 chainRn6,830 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 est,106 est,233 est,499 est,524 est,671 intronEst,187 intronEst,314 intronEst,580 intronEst,605 intronEst,752 mrna,179 nestedRepeats,31 nestedRepeats,87 netGalGal3,331 netGalGal3,623 netGalGal3,830 netGalVar1,342 netGalVar1,636 netGalVar1,845 netHg19,328 netHg19,620 netHg19,827 netMm10,328 netMm10,620 netMm10,827 netMm39,328 netMm39,620 netMm39,827 netMonDom4,328 netMonDom4,620 netMonDom4,827 netOryCun2,328 netOryCun2,620 netOryCun2,827 netRn6,331 netRn6,623 netRn6,830 nscanGene,171 refSeqComposite,47 refSeqComposite,262 refSeqComposite,1483 refSeqComposite,1511 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 transMapEnsemblV5,617 transMapEstV5,586 transMapRefSeqV5,586 transMapRnaV5,586 transMapV5,145 transMapV5,692 uniprot,158 uniprot,1380 uniprot,1768 xenoMrna,253 while chainGalGal3,220 chainGalVar1,228 chainHg19,218 chainMm10,218 chainMm39,218 chainMonDom4,218 chainNetGalGal3,223 chainNetGalVar1,231 chainNetHg19,221 chainNetMm10,220 chainNetMm39,221 chainNetMonDom4,221 chainNetOryCun2,221 chainNetRn6,223 chainOryCun2,218 chainRn6,220 netGalGal3,220 netGalVar1,228 netHg19,218 netMm10,218 netMm39,218 netMonDom4,218 netOryCun2,218 netRn6,220 nscanGene,162 white gap,72 whole HLTOGAannotvHg38v1,63 chainGalGal3,471 chainGalVar1,482 chainHg19,468 chainMm10,468 chainMm39,468 chainMonDom4,468 chainNetGalGal3,474 chainNetGalVar1,485 chainNetHg19,471 chainNetMm10,470 chainNetMm39,471 chainNetMonDom4,471 chainNetOryCun2,471 chainNetRn6,474 chainOryCun2,468 chainRn6,471 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 gap,96 gap,139 gold,138 netGalGal3,471 netGalVar1,482 netHg19,468 netMm10,468 netMm39,468 netMonDom4,468 netOryCun2,468 netRn6,471 refSeqComposite,1499 transMapEnsemblV5,607 transMapEstV5,576 transMapRefSeqV5,576 transMapRnaV5,576 transMapV5,682 whole-genome gold,20 whose refSeqComposite,221 refSeqComposite,350 refSeqComposite,967 transMapEnsemblV5,219 transMapEstV5,188 transMapRefSeqV5,188 transMapRnaV5,188 transMapV5,294 xenoMrna,80 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 wildcards est,271 intronEst,352 mrna,217 xenoMrna,291 will est,304 est,322 est,351 est,368 intronEst,385 intronEst,403 intronEst,432 intronEst,449 mrna,250 mrna,268 mrna,297 mrna,314 rmsk,277 rmsk,283 transMapEnsemblV5,61 uniprot,537 uniprot,665 uniprot,754 uniprot,1142 uniprot,1162 xenoMrna,324 xenoMrna,342 xenoMrna,371 xenoMrna,388 window-based windowmaskerSdust,101 windowmasker windowmaskerSdust,7 windowmaskerSdust,21 windowmaskerSdust,23 windowmaskerSdust,51 windowmaskerSdust,58 windowmaskerSdust,65 windowmaskerSdust,100 windowmaskersdust windowmaskerSdust,83 windows gc5Base,7 gc5Base,28 wish est,235 intronEst,316 mrna,181 refGene,246 refSeqComposite,173 xenoMrna,255 xenoRefGene,207 with HLTOGAannotvHg38v1,359 augustusGene,127 augustusGene,322 blastHg18KG,48 blastHg18KG,72 chainGalGal3,43 chainGalGal3,211 chainGalGal3,222 chainGalGal3,595 chainGalGal3,708 chainGalGal3,784 chainGalGal3,908 chainGalGal3,940 chainGalGal3,972 chainGalGal3,1109 chainGalVar1,46 chainGalVar1,219 chainGalVar1,230 chainGalVar1,608 chainGalVar1,723 chainGalVar1,799 chainGalVar1,923 chainGalVar1,955 chainGalVar1,987 chainGalVar1,1124 chainHg19,42 chainHg19,209 chainHg19,220 chainHg19,592 chainHg19,705 chainHg19,781 chainHg19,905 chainHg19,937 chainHg19,969 chainHg19,1106 chainMm10,42 chainMm10,209 chainMm10,220 chainMm10,592 chainMm10,705 chainMm10,781 chainMm10,905 chainMm10,937 chainMm10,969 chainMm10,1106 chainMm39,42 chainMm39,209 chainMm39,220 chainMm39,592 chainMm39,705 chainMm39,781 chainMm39,905 chainMm39,937 chainMm39,969 chainMm39,1106 chainMonDom4,42 chainMonDom4,209 chainMonDom4,220 chainMonDom4,592 chainMonDom4,705 chainMonDom4,781 chainMonDom4,905 chainMonDom4,937 chainMonDom4,969 chainMonDom4,1106 chainNetGalGal3,46 chainNetGalGal3,214 chainNetGalGal3,225 chainNetGalGal3,598 chainNetGalGal3,711 chainNetGalGal3,787 chainNetGalGal3,911 chainNetGalGal3,943 chainNetGalGal3,975 chainNetGalGal3,1112 chainNetGalVar1,49 chainNetGalVar1,222 chainNetGalVar1,233 chainNetGalVar1,611 chainNetGalVar1,726 chainNetGalVar1,802 chainNetGalVar1,926 chainNetGalVar1,958 chainNetGalVar1,990 chainNetGalVar1,1127 chainNetHg19,45 chainNetHg19,212 chainNetHg19,223 chainNetHg19,595 chainNetHg19,708 chainNetHg19,784 chainNetHg19,908 chainNetHg19,940 chainNetHg19,972 chainNetHg19,1109 chainNetMm10,44 chainNetMm10,211 chainNetMm10,222 chainNetMm10,594 chainNetMm10,707 chainNetMm10,783 chainNetMm10,907 chainNetMm10,939 chainNetMm10,971 chainNetMm10,1108 chainNetMm39,45 chainNetMm39,212 chainNetMm39,223 chainNetMm39,595 chainNetMm39,708 chainNetMm39,784 chainNetMm39,908 chainNetMm39,940 chainNetMm39,972 chainNetMm39,1109 chainNetMonDom4,45 chainNetMonDom4,212 chainNetMonDom4,223 chainNetMonDom4,595 chainNetMonDom4,708 chainNetMonDom4,784 chainNetMonDom4,908 chainNetMonDom4,940 chainNetMonDom4,972 chainNetMonDom4,1109 chainNetOryCun2,45 chainNetOryCun2,212 chainNetOryCun2,223 chainNetOryCun2,595 chainNetOryCun2,708 chainNetOryCun2,784 chainNetOryCun2,908 chainNetOryCun2,940 chainNetOryCun2,972 chainNetOryCun2,1109 chainNetRn6,46 chainNetRn6,214 chainNetRn6,225 chainNetRn6,598 chainNetRn6,711 chainNetRn6,787 chainNetRn6,911 chainNetRn6,943 chainNetRn6,975 chainNetRn6,1112 chainOryCun2,42 chainOryCun2,209 chainOryCun2,220 chainOryCun2,592 chainOryCun2,705 chainOryCun2,781 chainOryCun2,905 chainOryCun2,937 chainOryCun2,969 chainOryCun2,1106 chainRn6,43 chainRn6,211 chainRn6,222 chainRn6,595 chainRn6,708 chainRn6,784 chainRn6,908 chainRn6,940 chainRn6,972 chainRn6,1109 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 est,105 est,501 est,639 est,676 est,719 gap,20 gc5Base,35 intronEst,186 intronEst,582 intronEst,720 intronEst,757 intronEst,800 microsat,69 microsat,76 mrna,435 nestedRepeats,133 netGalGal3,43 netGalGal3,211 netGalGal3,222 netGalGal3,595 netGalGal3,708 netGalGal3,784 netGalGal3,908 netGalGal3,940 netGalGal3,972 netGalGal3,1109 netGalVar1,46 netGalVar1,219 netGalVar1,230 netGalVar1,608 netGalVar1,723 netGalVar1,799 netGalVar1,923 netGalVar1,955 netGalVar1,987 netGalVar1,1124 netHg19,42 netHg19,209 netHg19,220 netHg19,592 netHg19,705 netHg19,781 netHg19,905 netHg19,937 netHg19,969 netHg19,1106 netMm10,42 netMm10,209 netMm10,220 netMm10,592 netMm10,705 netMm10,781 netMm10,905 netMm10,937 netMm10,969 netMm10,1106 netMm39,42 netMm39,209 netMm39,220 netMm39,592 netMm39,705 netMm39,781 netMm39,905 netMm39,937 netMm39,969 netMm39,1106 netMonDom4,42 netMonDom4,209 netMonDom4,220 netMonDom4,592 netMonDom4,705 netMonDom4,781 netMonDom4,905 netMonDom4,937 netMonDom4,969 netMonDom4,1106 netOryCun2,42 netOryCun2,209 netOryCun2,220 netOryCun2,592 netOryCun2,705 netOryCun2,781 netOryCun2,905 netOryCun2,937 netOryCun2,969 netOryCun2,1106 netRn6,43 netRn6,211 netRn6,222 netRn6,595 netRn6,708 netRn6,784 netRn6,908 netRn6,940 netRn6,972 netRn6,1109 nscanGene,49 nscanGene,203 refGene,269 refGene,313 refSeqComposite,224 refSeqComposite,353 refSeqComposite,491 refSeqComposite,954 refSeqComposite,983 refSeqComposite,1042 refSeqComposite,1069 refSeqComposite,1095 refSeqComposite,1134 refSeqComposite,1240 refSeqComposite,1284 refSeqComposite,1402 rmsk,111 rmsk,225 simpleRepeat,52 tRNAs,7 tRNAs,58 tRNAs,85 tRNAs,119 tRNAs,162 tRNAs,177 tRNAs,197 tRNAs,242 transMapEnsemblV5,51 transMapEnsemblV5,183 transMapEnsemblV5,252 transMapEnsemblV5,353 transMapEnsemblV5,355 transMapEnsemblV5,584 transMapEstV5,152 transMapEstV5,221 transMapEstV5,322 transMapEstV5,324 transMapEstV5,553 transMapRefSeqV5,152 transMapRefSeqV5,221 transMapRefSeqV5,322 transMapRefSeqV5,324 transMapRefSeqV5,553 transMapRnaV5,152 transMapRnaV5,221 transMapRnaV5,322 transMapRnaV5,324 transMapRnaV5,553 transMapV5,258 transMapV5,327 transMapV5,428 transMapV5,430 transMapV5,659 uniprot,183 uniprot,258 uniprot,280 uniprot,458 uniprot,639 uniprot,716 uniprot,788 uniprot,946 uniprot,1475 uniprot,1481 uniprot,1496 uniprot,1501 uniprot,1718 uniprot,1948 windowmaskerSdust,54 xenoMrna,509 xenoRefGene,230 xenoRefGene,274 within est,139 est,552 est,708 gold,48 gold,107 gold,128 intronEst,220 intronEst,633 intronEst,789 mrna,85 mrna,424 refGene,123 refGene,302 refSeqComposite,725 refSeqComposite,1273 simpleRepeat,37 transMapEnsemblV5,655 transMapEstV5,624 transMapRefSeqV5,624 transMapRnaV5,624 transMapV5,730 uniprot,1109 uniprot,1313 uniprot,1345 uniprot,1488 uniprot,1806 xenoMrna,159 xenoMrna,498 xenoRefGene,84 xenoRefGene,263 without uniprot,139 wj chainGalGal3,1052 chainGalGal3,1094 chainGalVar1,1067 chainGalVar1,1109 chainHg19,1049 chainHg19,1091 chainMm10,1049 chainMm10,1091 chainMm39,1049 chainMm39,1091 chainMonDom4,1049 chainMonDom4,1091 chainNetGalGal3,1055 chainNetGalGal3,1097 chainNetGalVar1,1070 chainNetGalVar1,1112 chainNetHg19,1052 chainNetHg19,1094 chainNetMm10,1051 chainNetMm10,1093 chainNetMm39,1052 chainNetMm39,1094 chainNetMonDom4,1052 chainNetMonDom4,1094 chainNetOryCun2,1052 chainNetOryCun2,1094 chainNetRn6,1055 chainNetRn6,1097 chainOryCun2,1049 chainOryCun2,1091 chainRn6,1052 chainRn6,1094 est,802 intronEst,886 mrna,519 netGalGal3,1052 netGalGal3,1094 netGalVar1,1067 netGalVar1,1109 netHg19,1049 netHg19,1091 netMm10,1049 netMm10,1091 netMm39,1049 netMm39,1091 netMonDom4,1049 netMonDom4,1091 netOryCun2,1049 netOryCun2,1091 netRn6,1052 netRn6,1094 refGene,343 refSeqComposite,1733 xenoMrna,593 xenoRefGene,304 wm windowmaskerSdust,1 wm_counts windowmaskerSdust,64 windowmaskerSdust,67 words uniprot,1201 worldwide est,745 intronEst,829 mrna,462 refGene,333 refSeqComposite,1723 transMapEnsemblV5,701 transMapEstV5,670 transMapRefSeqV5,670 transMapRnaV5,670 transMapV5,776 xenoMrna,536 xenoRefGene,294 wortman nscanGene,297 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 ensGene,147 wrench refSeqComposite,753 written blastHg18KG,181 blastHg18KG,194 genscan,19 microsat,109 quality,106 simpleRepeat,69 wugsc chainGalGal3,6 chainGalGal3,69 chainGalGal3,310 chainNetGalGal3,7 chainNetGalGal3,72 chainNetGalGal3,313 chainNetGalGal3Viewchain,5 chainNetGalGal3Viewnet,5 netGalGal3,6 netGalGal3,69 netGalGal3,310 www.repeatmasker.org nestedRepeats,333 rmsk,356 x uniprot,1923 xm refSeqComposite,354 xm_ ncbiRefSeq,10 ncbiRefSeqOther,10 ncbiRefSeqPredicted,8 xml uniprot,1510 xr refSeqComposite,356 xr_ ncbiRefSeq,12 ncbiRefSeqOther,11 ncbiRefSeqPredicted,10 y ensGene,177 yap chainGalGal3,1035 chainGalVar1,1050 chainHg19,1032 chainMm10,1032 chainMm39,1032 chainMonDom4,1032 chainNetGalGal3,1038 chainNetGalVar1,1053 chainNetHg19,1035 chainNetMm10,1034 chainNetMm39,1035 chainNetMonDom4,1035 chainNetOryCun2,1035 chainNetRn6,1038 chainOryCun2,1032 chainRn6,1035 netGalGal3,1035 netGalVar1,1050 netHg19,1032 netMm10,1032 netMm39,1032 netMonDom4,1032 netOryCun2,1032 netRn6,1035 years uniprot,933 yet refSeqComposite,676 refSeqComposite,701 yip uniprot,2010 yl uniprot,2011 you est,234 intronEst,315 mrna,180 refGene,245 refSeqComposite,172 refSeqComposite,1352 refSeqComposite,1460 refSeqComposite,1544 refSeqComposite,1564 refSeqComposite,1634 rmsk,115 uniprot,655 uniprot,689 uniprot,1443 xenoMrna,254 xenoRefGene,206 younger nestedRepeats,94 your refSeqComposite,1526 refSeqComposite,1639 transMapEnsemblV5,632 transMapEstV5,601 transMapRefSeqV5,601 transMapRnaV5,601 transMapV5,707 uniprot,1783 yp refSeqComposite,229 refSeqComposite,232 refSeqComposite,242 yp_ ncbiRefSeq,14 ncbiRefSeqCurated,12 ncbiRefSeqOther,14 z chainGalGal3,1098 chainGalVar1,1113 chainHg19,1095 chainMm10,1095 chainMm39,1095 chainMonDom4,1095 chainNetGalGal3,1101 chainNetGalVar1,1116 chainNetHg19,1098 chainNetMm10,1097 chainNetMm39,1098 chainNetMonDom4,1098 chainNetOryCun2,1098 chainNetRn6,1101 chainOryCun2,1095 chainRn6,1098 netGalGal3,1098 netGalVar1,1113 netHg19,1095 netMm10,1095 netMm39,1095 netMonDom4,1095 netOryCun2,1095 netRn6,1098 zebrafish augustusGene,202 augustusGene,278 zhang chainGalGal3,936 chainGalGal3,1097 chainGalVar1,951 chainGalVar1,1112 chainHg19,933 chainHg19,1094 chainMm10,933 chainMm10,1094 chainMm39,933 chainMm39,1094 chainMonDom4,933 chainMonDom4,1094 chainNetGalGal3,939 chainNetGalGal3,1100 chainNetGalVar1,954 chainNetGalVar1,1115 chainNetHg19,936 chainNetHg19,1097 chainNetMm10,935 chainNetMm10,1096 chainNetMm39,936 chainNetMm39,1097 chainNetMonDom4,936 chainNetMonDom4,1097 chainNetOryCun2,936 chainNetOryCun2,1097 chainNetRn6,939 chainNetRn6,1100 chainOryCun2,933 chainOryCun2,1094 chainRn6,936 chainRn6,1097 netGalGal3,936 netGalGal3,1097 netGalVar1,951 netGalVar1,1112 netHg19,933 netHg19,1094 netMm10,933 netMm10,1094 netMm39,933 netMm39,1094 netMonDom4,933 netMonDom4,1094 netOryCun2,933 netOryCun2,1094 netRn6,936 netRn6,1097 zheng chainGalGal3,935 chainGalVar1,950 chainHg19,932 chainMm10,932 chainMm39,932 chainMonDom4,932 chainNetGalGal3,938 chainNetGalVar1,953 chainNetHg19,935 chainNetMm10,934 chainNetMm39,935 chainNetMonDom4,935 chainNetOryCun2,935 chainNetRn6,938 chainOryCun2,932 chainRn6,935 netGalGal3,935 netGalVar1,950 netHg19,932 netMm10,932 netMm39,932 netMonDom4,932 netOryCun2,932 netRn6,935 zhu transMapEnsemblV5,787 transMapEstV5,756 transMapRefSeqV5,756 transMapRnaV5,756 transMapV5,862 zimmermann nscanGene,259 zinc uniprot,326 zone tRNAs,208 zoomed quality,42 zoomed-in genscan,103