This track displays alignments of the $o_date $o_organism genome vs. the $organism genome.
The alignments were made with blat in translated protein mode using the parameters -q=dnax -t=dnax. The default settings were used otherwise. Both genomes were masked with RepeatMasker and Tandem Repeat Finder before running blat.
This track was generated at UCSC.
Kent WJ. BLAT--the BLAST-like alignment tool. Genome Res. 2002 Apr;12(4):656-64. PMID: 11932250; PMC: PMC187518